Metagenome / Metatranscriptome Family F031988

Basic Information
Family ID	F031988
Family Type	Metagenome / Metatranscriptome
Number of Sequences	181
Average Sequence Length	39 residues
Representative Sequence	VLLKIVYLLTRRVLGLAVLVFRGDRAKDAELLVLRHE
Number of Associated Samples	139
Number of Associated Scaffolds	181

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	29.83 %
% of genes near scaffold ends (potentially truncated)	86.19 %
% of genes from short scaffolds (< 2000 bps)	82.87 %
Associated GOLD sequencing projects	130
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Most Common Taxonomy
Group	Bacteria (65.193 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (11.050 % of family members)
Environment Ontology (ENVO)	Unclassified (28.177 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.724 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.31% β-sheet: 0.00% Coil/Unstructured: 47.69%
Feature Viewer

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Pfam ID	Name	% Frequency in 181 Family Scaffolds
PF13683	rve_3	2.76
PF00196	GerE	2.76
PF11774	Lsr2	1.66
PF01648	ACPS	1.66
PF02604	PhdYeFM_antitox	1.66
PF05016	ParE_toxin	1.10
PF02371	Transposase_20	1.10
PF13361	UvrD_C	1.10
PF04672	Methyltransf_19	1.10
PF02254	TrkA_N	1.10
PF12833	HTH_18	1.10
PF13443	HTH_26	1.10
PF13424	TPR_12	0.55
PF01726	LexA_DNA_bind	0.55
PF00082	Peptidase_S8	0.55
PF09723	Zn-ribbon_8	0.55
PF13738	Pyr_redox_3	0.55
PF07676	PD40	0.55
PF14269	Arylsulfotran_2	0.55
PF13384	HTH_23	0.55
PF01381	HTH_3	0.55
PF00239	Resolvase	0.55
PF01695	IstB_IS21	0.55
PF02653	BPD_transp_2	0.55
PF00313	CSD	0.55
PF13380	CoA_binding_2	0.55
PF02738	MoCoBD_1	0.55
PF08241	Methyltransf_11	0.55
PF00781	DAGK_cat	0.55
PF07883	Cupin_2	0.55
PF00202	Aminotran_3	0.55
PF13676	TIR_2	0.55
PF07690	MFS_1	0.55
PF00441	Acyl-CoA_dh_1	0.55
PF07311	Dodecin	0.55
PF09360	zf-CDGSH	0.55
PF13577	SnoaL_4	0.55
PF01527	HTH_Tnp_1	0.55
PF01609	DDE_Tnp_1	0.55
PF04011	LemA	0.55
PF00106	adh_short	0.55
PF07729	FCD	0.55
PF00582	Usp	0.55
PF13561	adh_short_C2	0.55
PF13359	DDE_Tnp_4	0.55
PF03551	PadR	0.55
PF00107	ADH_zinc_N	0.55
PF00903	Glyoxalase	0.55
PF00174	Oxidored_molyb	0.55
PF00805	Pentapeptide	0.55
PF13549	ATP-grasp_5	0.55
PF04461	DUF520	0.55
PF07731	Cu-oxidase_2	0.55
PF01494	FAD_binding_3	0.55
PF13466	STAS_2	0.55
PF13280	WYL	0.55
PF08388	GIIM	0.55
PF12770	CHAT	0.55
PF05147	LANC_like	0.55
PF13377	Peripla_BP_3	0.55
PF00589	Phage_integrase	0.55
PF13419	HAD_2	0.55
PF11239	DUF3040	0.55
PF01565	FAD_binding_4	0.55
PF13005	zf-IS66	0.55

COG ID	Name	Functional Category	% Frequency in 181 Family Scaffolds
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.66
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.66
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.10
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.10
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.10
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.55
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.55
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.55
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.55
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.55
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.55
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.55
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.55
COG4403	Lantibiotic modifying enzyme	Defense mechanisms [V]	0.55
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.55
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.55
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.55
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.55
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.55
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.55
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.55
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.55
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.55
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.55
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	0.55
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.55
COG1666	Cyclic di-GMP-binding protein YajQ, UPF0234 family	Signal transduction mechanisms [T]	0.55
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.55
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.55
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.55
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.19 %
Unclassified	root	N/A	34.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.19 %
Unclassified	root	N/A	34.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.19 %
Unclassified	root	N/A	34.81 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.93 %
Unclassified	root	N/A	34.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.55 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.28 %
Unclassified	root	N/A	34.81 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.10 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.55 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.57 %
Unclassified	root	N/A	34.81 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.10 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.55 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.55 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.55 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.81 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.76 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.21 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.21 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.66 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.10 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	1.10 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1.10 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.55 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	0.55 %
Sporichthyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales	0.55 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.55 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.55 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.76 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.21 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.66 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.66 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	1.10 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.10 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → environmental samples	0.55 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.55 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.55 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.55 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.55 %
Sporichthyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae	0.55 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.55 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples	0.55 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.76 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.10 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.10 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.10 %
Kitasatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora	1.10 %
uncultured Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → environmental samples → uncultured Solirubrobacterales bacterium	0.55 %
Actinoallomurus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	0.55 %
Alloactinosynnema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Alloactinosynnema	0.55 %
Actinocrinis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis	0.55 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.55 %
Salinispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora	0.55 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.55 %
Sporichthya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya	0.55 %
Ferrimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium	0.55 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.55 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.55 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	0.55 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	0.55 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.76 %
unclassified Kitasatospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora	1.10 %
Actinocrinis puniceicyclus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	0.55 %
Nonomuraea solani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea solani	0.55 %
Actinomadura montaniterrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura montaniterrae	0.55 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.55 %
unclassified Alloactinosynnema	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Alloactinosynnema → unclassified Alloactinosynnema	0.55 %
unclassified Actinospica	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica	0.55 %
Actinomadura litoris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura litoris	0.55 %
Sporichthya polymorpha	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	0.55 %
Ferrimicrobium acidiphilum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium → Ferrimicrobium acidiphilum	0.55 %
Streptomyces europaeiscabiei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces europaeiscabiei	0.55 %
Salinispora tropica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora tropica	0.55 %
Frankia saprophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia saprophytica	0.55 %
Amycolatopsis saalfeldensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis saalfeldensis	0.55 %
uncultured Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → environmental samples → uncultured Solirubrobacterales bacterium	0.55 %
Actinoallomurus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	0.55 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.55 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	0.55 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.76 %
Kitasatospora sp. A2-31	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora → Kitasatospora sp. A2-31	1.10 %
Alloactinosynnema sp. L-07	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Alloactinosynnema → unclassified Alloactinosynnema → Alloactinosynnema sp. L-07	0.55 %
Actinospica sp. MGRD01-02	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica → Actinospica sp. MGRD01-02	0.55 %
Actinocrinis puniceicyclus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	0.55 %
Nonomuraea solani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea solani	0.55 %
Actinomadura montaniterrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura montaniterrae	0.55 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.55 %
Actinomadura litoris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura litoris	0.55 %
Sporichthya polymorpha	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	0.55 %
Ferrimicrobium acidiphilum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium → Ferrimicrobium acidiphilum	0.55 %
Streptomyces europaeiscabiei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces europaeiscabiei	0.55 %
Salinispora tropica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora tropica	0.55 %
Frankia saprophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia saprophytica	0.55 %
Amycolatopsis saalfeldensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis saalfeldensis	0.55 %
uncultured Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → environmental samples → uncultured Solirubrobacterales bacterium	0.55 %
Actinoallomurus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	0.55 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.55 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	0.55 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10223170	Not Available	721	Open in IMG/M
3300001449\|JGI20208J14878_1001007	All Organisms → cellular organisms → Bacteria	5862	Open in IMG/M
3300001452\|JGI20203J14952_1015092	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300003368\|JGI26340J50214_10092661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300003369\|JGI24140J50213_10085307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1066	Open in IMG/M
3300004092\|Ga0062389_100260370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia saprophytica	1769	Open in IMG/M
3300005179\|Ga0066684_10844686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora tropica	602	Open in IMG/M
3300005529\|Ga0070741_10068980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4007	Open in IMG/M
3300005541\|Ga0070733_10017664	All Organisms → cellular organisms → Bacteria	4454	Open in IMG/M
3300005545\|Ga0070695_100949582	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300005602\|Ga0070762_10009150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4920	Open in IMG/M
3300005921\|Ga0070766_10155674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1403	Open in IMG/M
3300005994\|Ga0066789_10360307	Not Available	608	Open in IMG/M
3300005995\|Ga0066790_10484937	Not Available	529	Open in IMG/M
3300006028\|Ga0070717_10730509	Not Available	900	Open in IMG/M
3300006028\|Ga0070717_10927507	Not Available	793	Open in IMG/M
3300006028\|Ga0070717_11633109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300006050\|Ga0075028_100667134	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300006050\|Ga0075028_100939150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300006059\|Ga0075017_101103061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300006173\|Ga0070716_100940413	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300006854\|Ga0075425_102876008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300006953\|Ga0074063_10090320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	590	Open in IMG/M
3300006954\|Ga0079219_12281191	Not Available	523	Open in IMG/M
3300007255\|Ga0099791_10256364	Not Available	830	Open in IMG/M
3300007265\|Ga0099794_10228578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	957	Open in IMG/M
3300009089\|Ga0099828_11198944	Not Available	673	Open in IMG/M
3300009098\|Ga0105245_11458123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	735	Open in IMG/M
3300009098\|Ga0105245_12960590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300009177\|Ga0105248_11971082	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300009400\|Ga0116854_1059058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1710	Open in IMG/M
3300009400\|Ga0116854_1059835	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300009400\|Ga0116854_1060567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis saalfeldensis	791	Open in IMG/M
3300009523\|Ga0116221_1037786	All Organisms → cellular organisms → Bacteria	2328	Open in IMG/M
3300009552\|Ga0116138_1104783	Not Available	784	Open in IMG/M
3300009623\|Ga0116133_1039011	Not Available	1175	Open in IMG/M
3300009628\|Ga0116125_1101682	Not Available	769	Open in IMG/M
3300009644\|Ga0116121_1133605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	782	Open in IMG/M
3300009683\|Ga0116224_10033501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2522	Open in IMG/M
3300009762\|Ga0116130_1014151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2771	Open in IMG/M
3300009824\|Ga0116219_10751059	Not Available	533	Open in IMG/M
3300009839\|Ga0116223_10274549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1012	Open in IMG/M
3300010048\|Ga0126373_10364981	Not Available	1460	Open in IMG/M
3300010159\|Ga0099796_10102720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1078	Open in IMG/M
3300010322\|Ga0134084_10374215	Not Available	549	Open in IMG/M
3300010343\|Ga0074044_10664463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	680	Open in IMG/M
3300010358\|Ga0126370_12257684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300010366\|Ga0126379_10034300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4008	Open in IMG/M
3300010366\|Ga0126379_10049876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3438	Open in IMG/M
3300010366\|Ga0126379_10072502	Not Available	2944	Open in IMG/M
3300010371\|Ga0134125_12475699	Not Available	564	Open in IMG/M
3300010373\|Ga0134128_11645334	Not Available	707	Open in IMG/M
3300010375\|Ga0105239_12561046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	595	Open in IMG/M
3300010379\|Ga0136449_101007181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1340	Open in IMG/M
3300010379\|Ga0136449_101542154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	1014	Open in IMG/M
3300010379\|Ga0136449_101598892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	990	Open in IMG/M
3300010379\|Ga0136449_104020814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300010876\|Ga0126361_10333893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1131	Open in IMG/M
3300011269\|Ga0137392_10342473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces europaeiscabiei	1238	Open in IMG/M
3300011269\|Ga0137392_10661456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	866	Open in IMG/M
3300012199\|Ga0137383_10711355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300012199\|Ga0137383_10750150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	713	Open in IMG/M
3300012199\|Ga0137383_11338394	Not Available	509	Open in IMG/M
3300012207\|Ga0137381_10854893	Not Available	787	Open in IMG/M
3300012210\|Ga0137378_10023134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5465	Open in IMG/M
3300012210\|Ga0137378_10436162	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1214	Open in IMG/M
3300012351\|Ga0137386_11100735	Not Available	561	Open in IMG/M
3300012357\|Ga0137384_10132600	Not Available	2086	Open in IMG/M
3300012357\|Ga0137384_10176876	Not Available	1787	Open in IMG/M
3300012924\|Ga0137413_10329805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1076	Open in IMG/M
3300013296\|Ga0157374_11329543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M
3300013306\|Ga0163162_10290041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1768	Open in IMG/M
3300014158\|Ga0181521_10305789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	814	Open in IMG/M
3300014164\|Ga0181532_10365568	Not Available	806	Open in IMG/M
3300014164\|Ga0181532_10554997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora → Kitasatospora sp. A2-31	626	Open in IMG/M
3300014200\|Ga0181526_10210874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1241	Open in IMG/M
3300014493\|Ga0182016_10818963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300014501\|Ga0182024_11084509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	947	Open in IMG/M
3300015374\|Ga0132255_106312186	Not Available	502	Open in IMG/M
3300016730\|Ga0181515_1077412	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300017821\|Ga0187812_1075187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1118	Open in IMG/M
3300017821\|Ga0187812_1117998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300017821\|Ga0187812_1220415	Not Available	605	Open in IMG/M
3300017822\|Ga0187802_10318335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300017924\|Ga0187820_1154003	Not Available	694	Open in IMG/M
3300017924\|Ga0187820_1265236	Not Available	556	Open in IMG/M
3300017926\|Ga0187807_1080706	Not Available	1016	Open in IMG/M
3300017926\|Ga0187807_1085240	Not Available	989	Open in IMG/M
3300017928\|Ga0187806_1255072	Not Available	608	Open in IMG/M
3300017933\|Ga0187801_10180927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Alloactinosynnema → unclassified Alloactinosynnema → Alloactinosynnema sp. L-07	830	Open in IMG/M
3300017946\|Ga0187879_10020620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4071	Open in IMG/M
3300017946\|Ga0187879_10135426	Not Available	1399	Open in IMG/M
3300017972\|Ga0187781_10466998	Not Available	904	Open in IMG/M
3300018030\|Ga0187869_10316527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300018030\|Ga0187869_10319785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora → Kitasatospora sp. A2-31	745	Open in IMG/M
3300018033\|Ga0187867_10256155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	985	Open in IMG/M
3300018037\|Ga0187883_10355671	Not Available	749	Open in IMG/M
3300018037\|Ga0187883_10774979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300018042\|Ga0187871_10031232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3329	Open in IMG/M
3300018044\|Ga0187890_10803426	Not Available	532	Open in IMG/M
3300019890\|Ga0193728_1004136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7379	Open in IMG/M
3300019890\|Ga0193728_1067517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1707	Open in IMG/M
3300020580\|Ga0210403_11221977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300021403\|Ga0210397_10340067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1110	Open in IMG/M
3300021478\|Ga0210402_10170331	Not Available	1991	Open in IMG/M
3300021478\|Ga0210402_12001537	Not Available	505	Open in IMG/M
3300025412\|Ga0208194_1074866	Not Available	515	Open in IMG/M
3300025474\|Ga0208479_1005762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea solani	2635	Open in IMG/M
3300025474\|Ga0208479_1059159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	745	Open in IMG/M
3300025494\|Ga0207928_1055354	Not Available	750	Open in IMG/M
3300025504\|Ga0208356_1062535	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300025504\|Ga0208356_1063221	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300025588\|Ga0208586_1001365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7608	Open in IMG/M
3300025588\|Ga0208586_1120479	Not Available	558	Open in IMG/M
3300025604\|Ga0207930_1094073	Not Available	690	Open in IMG/M
3300025625\|Ga0208219_1000478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14356	Open in IMG/M
3300025625\|Ga0208219_1003746	All Organisms → cellular organisms → Bacteria	5266	Open in IMG/M
3300025625\|Ga0208219_1006113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4094	Open in IMG/M
3300025627\|Ga0208220_1021980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2035	Open in IMG/M
3300025627\|Ga0208220_1091692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	827	Open in IMG/M
3300025633\|Ga0208480_1002571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium → Ferrimicrobium acidiphilum	6388	Open in IMG/M
3300025633\|Ga0208480_1018763	All Organisms → cellular organisms → Bacteria	2092	Open in IMG/M
3300025633\|Ga0208480_1040894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1252	Open in IMG/M
3300025634\|Ga0208589_1130122	Not Available	581	Open in IMG/M
3300025928\|Ga0207700_10863747	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300026291\|Ga0209890_10066628	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300026294\|Ga0209839_10282303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300026295\|Ga0209234_1195394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	692	Open in IMG/M
3300026310\|Ga0209239_1265438	Not Available	591	Open in IMG/M
3300026360\|Ga0257173_1009033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1109	Open in IMG/M
3300026498\|Ga0257156_1002764	All Organisms → cellular organisms → Bacteria	3224	Open in IMG/M
3300026557\|Ga0179587_10685760	Not Available	675	Open in IMG/M
3300026557\|Ga0179587_10759639	Not Available	639	Open in IMG/M
3300026557\|Ga0179587_10835765	Not Available	607	Open in IMG/M
3300026910\|Ga0207840_1024898	Not Available	589	Open in IMG/M
3300027604\|Ga0208324_1026125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1776	Open in IMG/M
3300027696\|Ga0208696_1269751	Not Available	525	Open in IMG/M
3300027703\|Ga0207862_1051661	Not Available	1239	Open in IMG/M
3300027812\|Ga0209656_10069586	Not Available	1922	Open in IMG/M
3300027812\|Ga0209656_10096263	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300027824\|Ga0209040_10242893	Not Available	908	Open in IMG/M
3300027867\|Ga0209167_10031290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2559	Open in IMG/M
3300028450\|Ga0189898_1040166	Not Available	505	Open in IMG/M
3300028762\|Ga0302202_10352737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	694	Open in IMG/M
3300028784\|Ga0307282_10170487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1035	Open in IMG/M
3300028813\|Ga0302157_10067347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2399	Open in IMG/M
3300028882\|Ga0302154_10310227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	773	Open in IMG/M
3300029911\|Ga0311361_10782028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	851	Open in IMG/M
3300029914\|Ga0311359_10567363	Not Available	846	Open in IMG/M
3300029951\|Ga0311371_11252714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851	Open in IMG/M
3300029999\|Ga0311339_10594802	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300030490\|Ga0302184_10245549	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300030494\|Ga0310037_10306699	Not Available	675	Open in IMG/M
3300030503\|Ga0311370_10296170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2096	Open in IMG/M
3300030617\|Ga0311356_10193498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2082	Open in IMG/M
3300030631\|Ga0210279_10405458	Not Available	548	Open in IMG/M
3300030706\|Ga0310039_10018195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3454	Open in IMG/M
3300030743\|Ga0265461_12956764	Not Available	570	Open in IMG/M
3300031543\|Ga0318516_10578523	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031543\|Ga0318516_10581329	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300031544\|Ga0318534_10419543	Not Available	768	Open in IMG/M
3300031564\|Ga0318573_10710288	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300031708\|Ga0310686_106555740	Not Available	530	Open in IMG/M
3300031708\|Ga0310686_119252054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura montaniterrae	949	Open in IMG/M
3300031708\|Ga0310686_119697778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6728	Open in IMG/M
3300031751\|Ga0318494_10426853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
3300031890\|Ga0306925_12093824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300031910\|Ga0306923_11946022	Not Available	599	Open in IMG/M
3300031946\|Ga0310910_11571892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300032035\|Ga0310911_10896448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	511	Open in IMG/M
3300032160\|Ga0311301_10307116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → environmental samples → uncultured Solirubrobacterales bacterium	2532	Open in IMG/M
3300032160\|Ga0311301_10761022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica → Actinospica sp. MGRD01-02	1342	Open in IMG/M
3300032205\|Ga0307472_100702422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	910	Open in IMG/M
3300032261\|Ga0306920_100725583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	1463	Open in IMG/M
3300032261\|Ga0306920_102325664	Not Available	742	Open in IMG/M
3300032515\|Ga0348332_11934362	Not Available	612	Open in IMG/M
3300032770\|Ga0335085_11759918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	636	Open in IMG/M
3300032805\|Ga0335078_11935235	Not Available	634	Open in IMG/M
3300032892\|Ga0335081_12676302	Not Available	510	Open in IMG/M
3300032896\|Ga0335075_11669415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura litoris	520	Open in IMG/M
3300033290\|Ga0318519_11067782	Not Available	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.58%
Host-Associated	Host-Associated	4.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.59%
Aquatic	Environmental → Aquatic	20.99%
Plants	Host-Associated → Plants	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.51%
Freshwater	Environmental → Aquatic → Freshwater	19.34%
Peat	Environmental → Terrestrial → Peat	5.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.31%
Sediment	Environmental → Aquatic → Sediment	1.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.10%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.35%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.63%
Loam	Environmental → Terrestrial → Soil → Loam	5.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.66%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.60%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	11.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.55%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	11.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.31%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.21%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.66%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.66%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.10%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.55%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.55%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.55%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.55%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.55%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001449	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow	Environmental	Open in IMG/M
3300001452	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009400	Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026910	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028450	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030631	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO141-VCO086SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031988

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_102231701	3300001356	Peatlands Soil	LGGRLLVKIVYLLVRRILHLVVLLFRRDMAKDAERRRGHLL
JGI20208J14878_10010074	3300001449	Arctic Peat Soil	VLLKIACLLMRWLFGLTVLVFHGDRAKNAELLVLRHENAVLR
JGI20203J14952_10150921	3300001452	Arctic Peat Soil	MVGWRVLKIVYLLTCRVLGVAVLVFRSDRGNAAELLV
JGI26340J50214_100926613	3300003368	Bog Forest Soil	VLLKIVYLLTCRVLGLAALGFRGDRVKDAELLVLRHENAV
JGI24140J50213_100853071	3300003369	Arctic Peat Soil	VLLKIVYLLIRRLLGLAVLVFRKDLAKDAELLVLRTPCC*
Ga0062389_1002603702	3300004092	Bog Forest Soil	LACRVLLKIVYLLMCRVLGLAVLAFRGDRAKDAELLVLRH
Ga0066684_108446861	3300005179	Soil	LACRVLLKIVYLLTCRAIGLAVLAFRGDRAKDAELLVLRHENA
Ga0070741_100689806	3300005529	Surface Soil	LAWCWLACRVLLKIVYVLTCLVVSLMVLVFPGDLAKDAELLVLRQENAVLR*
Ga0070733_100176646	3300005541	Surface Soil	MWCWLACRVLLKIVYVLRCRVLGLAVLVFGGDLAKDAEPTP
Ga0070695_1009495823	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MGAVMVGGRVLLKIVYLLSCRVLGLAVLMIRGDRAKDAELL
Ga0070762_100091501	3300005602	Soil	VPLKIVYLLVRRVLGLAVLVFRTDLAKDAELLVLRH
Ga0070766_101556743	3300005921	Soil	MPLKVVCLLVPRILGLAVLISRGDLAKDAELLVLR
Ga0066789_103603072	3300005994	Soil	LACQVLLKIFYLLMRWSFSVTVLVFRGNEAKDAEILVLRH
Ga0066790_104849371	3300005995	Soil	LAVGVLLKIAYLLMRWTFGLAVLMFRGDQAKNAELLVL
Ga0070717_107305092	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LAGRVLLKIVYLLVRQVLGLAILMFRGDGAREAELPVLRHENAVL
Ga0070717_109275073	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LAGRVLLKVVCLLMRWTFGLAVLMLRGDQANNAEL
Ga0070717_116331091	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LACRVPLKIVYLLTCRILGLAVLVFRGDRAKDAELLVLRHEN
Ga0075028_1006671342	3300006050	Watersheds	LAGRVLLKIVYLLTCRVLGLAVLVFRGDRAKDAELLVLRHE
Ga0075028_1009391501	3300006050	Watersheds	LACLVLLKIVYLLVCRILGLAVLTVRRDQSKEAELLVGCQKSA*
Ga0075017_1011030611	3300006059	Watersheds	LAGRVLLKIAYLLVRRIPGLAVLVFRGDRAKDAELL
Ga0070716_1009404131	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VQLKIVYVIARRLLSLAVLVFRRDRTKDAELLVLR
Ga0075425_1028760081	3300006854	Populus Rhizosphere	VLLKIVYLLMCQVLGLVRLVFCGDLAKDAELLVLRHENAV
Ga0074063_100903202	3300006953	Soil	LAGRMLLKIVYLLMRSVLGLAVLVLRGDRAKDAELLVLRH*
Ga0079219_122811911	3300006954	Agricultural Soil	LACRMLLKIVYLLTCRVLGLAVVVFRGDLAKDAEL
Ga0099791_102563641	3300007255	Vadose Zone Soil	LADRVLLKIVYLLTCRVLDVAVLVFRGDRAKDAELLVL
Ga0099794_102285782	3300007265	Vadose Zone Soil	LAYEAVQRWLACQVLLKIACLLMRWLFSLAVVVVRGDRAKNAELLVLR
Ga0099828_111989441	3300009089	Vadose Zone Soil	LAGRVLLKIACLLMRWAFGLAVLMFRGDQAKNAELLVLR
Ga0105245_114581232	3300009098	Miscanthus Rhizosphere	LAGRVLLKIVYLLTCRVLGVAVLVFRGDRAKAAELLVLRHENELYRNCER*
Ga0105245_129605901	3300009098	Miscanthus Rhizosphere	MWCWLACRVLLKIVYLLTCRVLGLAVLVFRGDLAKDAELLV
Ga0105248_119710822	3300009177	Switchgrass Rhizosphere	LADQVLLKIVFLLMRWLFSLAVLVVRGDGEKNAELLVLRH
Ga0116854_10590582	3300009400	Soil	VLLKIVYLLARRVLTLSVLLWRGDLAKDAELLVLR
Ga0116854_10598353	3300009400	Soil	VLLKIVYLLTCRVLGVAVLVFRGDRAKAAELLVLRHEN
Ga0116854_10605672	3300009400	Soil	MLLKIACLLMRWSFGLAVLVCRGDQAKNAGLLVLRHE
Ga0116221_10377864	3300009523	Peatlands Soil	LAGRVLLKIAYLLMRWTFGLAVLMFRGDQAKNAVKGH*
Ga0116138_11047831	3300009552	Peatland	LAGQVLLKIACLLMRWLFSLAVLVIRGDREKNAELLVLRHVGM
Ga0116133_10390112	3300009623	Peatland	LAGQVLLKIACLLMRWLFSLAVLVIRGDREKNAELLVLRHVGMVR*
Ga0116125_11016821	3300009628	Peatland	CLLMRWLFSLAVLVIRGDREKNAELLVLRHVGMVR*
Ga0116121_11336051	3300009644	Peatland	VLLKITYLLMRWTLGLAVLMFRGDRAKNAELPSAEG*
Ga0116224_100335015	3300009683	Peatlands Soil	VLPKIVYLLTCRVLSLAVLVFRGDLAKDAERLVLGHEN
Ga0116130_10141511	3300009762	Peatland	LAGQVLLKIACLLMRWLFSLAVRVIRGDREKNAELL
Ga0116219_107510592	3300009824	Peatlands Soil	VLLKIVYLLVRQVLGLAVLMFRGDGAKEAELLVLR
Ga0116223_102745492	3300009839	Peatlands Soil	VLLKIVYVLVRRLLSLAVLVFRGDRAKDAELLALRHA
Ga0126373_103649813	3300010048	Tropical Forest Soil	VRLKIVYLLMRWSFGLIALVLRGDSAKNAELLVLRHEN
Ga0099796_101027202	3300010159	Vadose Zone Soil	VLLKIVYLLTCRVLGLAVLMFRGDRAKDAELLVLRHQNA
Ga0134084_103742152	3300010322	Grasslands Soil	VLLKIAYLLTCRVLGVAVLVFGGDRAKDAELLVLRHEN
Ga0074044_106644633	3300010343	Bog Forest Soil	MLLKIVYQLTRRVLGLAVLAFRGDQAKDAELLALRHQNA
Ga0126370_122576842	3300010358	Tropical Forest Soil	LADQVLLKIVCLMMRWLFGLTVLVFRGDRTKNAELLVLR
Ga0126379_100343001	3300010366	Tropical Forest Soil	LADPVLLKIVCLMMRWLFGLTVLVFRGDQTKNAELLVLRHENAV
Ga0126379_100498761	3300010366	Tropical Forest Soil	LAGRVLLKIAYVLMCRMLGLVVLLCRDNQAKDAELLML
Ga0126379_100725021	3300010366	Tropical Forest Soil	LAGQVLLKIVCLMMRWLFGLTVLVFRGDQTKNAELLVLRHENAV
Ga0134125_124756991	3300010371	Terrestrial Soil	VLLKIVYLLTCRVLGVTVLVFRGDRAKAAELLVLRHENELYRNCER*
Ga0134128_116453341	3300010373	Terrestrial Soil	MWCWLACRVLLKIVYLLTCRVLGLAVPVFRGDLAKDAELL
Ga0105239_125610462	3300010375	Corn Rhizosphere	VLLTIVYLLVRRVLSLAVLLLRRDLAKEAELLALR
Ga0136449_1010071812	3300010379	Peatlands Soil	MLFKIVYLLVRRILGLAVLISRSDLAKDAELLVLR
Ga0136449_1015421541	3300010379	Peatlands Soil	LADRVLLKIVCLLMRWLFGLTVLVVRGDQAKNAEL
Ga0136449_1015988921	3300010379	Peatlands Soil	MWCWLACRVLLKIIYLLTCRVLGLAVLVFRGDLAKDAELLGSPA*
Ga0136449_1040208143	3300010379	Peatlands Soil	LWLADRVLLKIIYGLVCRLFSLAALMFRCDSAKDAELLVL*
Ga0126361_103338932	3300010876	Boreal Forest Soil	MLLKIVCPLTCRVLGMAVLAFRGDQAKAAELLVWGCR*
Ga0137392_103424734	3300011269	Vadose Zone Soil	VPLKIVYLLTCPVLGLAVVVFRGDRAKNAELLALRH
Ga0137392_106614562	3300011269	Vadose Zone Soil	VLLKISYLLMRWLFGLVVLVFRGDEAKDAELLVLRHE
Ga0137383_107113553	3300012199	Vadose Zone Soil	VLLKIVYLLIRRVLGLAVLVFRRDRAKDAELLVLRH
Ga0137383_107501501	3300012199	Vadose Zone Soil	MKIAYLLMRWFFGVVVLVFRGDRAKDAELLVLRMRTRCCAG
Ga0137383_113383941	3300012199	Vadose Zone Soil	MLLKIVYLLTCRVLGVAVLVFHGDRAKDAELPVLRHENA
Ga0137381_108548932	3300012207	Vadose Zone Soil	VLLNIVYLLTCRVLGLTVLVFRGDRTKDAELLVLRHE
Ga0137378_100231349	3300012210	Vadose Zone Soil	VLLNIVYLLTCRVLGLTVLVFPGDRTKDAELLVLRHEN
Ga0137378_104361621	3300012210	Vadose Zone Soil	LAGQVLLKIVCLLLRWLFGLAVLVARSDRAKDAELLVLRHENA
Ga0137386_111007351	3300012351	Vadose Zone Soil	MLLKIAYMLTRRLLDMAVLVFRGNQAKNAELLVLRHEN
Ga0137384_101326005	3300012357	Vadose Zone Soil	MLARLWLAGRVALKVVYLLTCRILGQAVLVFRGDRAKEAELLVL
Ga0137384_101768763	3300012357	Vadose Zone Soil	VLLKIVYLLTCRILGVAVLVFHGDRAKTAELLVLRH
Ga0137413_103298051	3300012924	Vadose Zone Soil	LAGQVQIKIAYLLMRWLFGLTVLVFRGDQAKNAELLVL
Ga0157374_113295431	3300013296	Miscanthus Rhizosphere	VLLTIVYLLVRRVLSLAVLLLRRDLAKEAELLALRHRPAGSR
Ga0163162_102900413	3300013306	Switchgrass Rhizosphere	VLLTIVYLLVRRVLSLAVLLLRRDLAKEAELLALRHRPAGSRL*
Ga0181521_103057892	3300014158	Bog	LTWGWLACRVLLKIVYLLTCRVLGLAVLVFRGDLA
Ga0181532_103655682	3300014164	Bog	VLLKIVYLLTRRVLGLAVLVFRGDRAKDAELLVLRHE
Ga0181532_105549972	3300014164	Bog	VLLKIAYLLMRWTLGLAVLMFRGDRAKNAELPSAEG*
Ga0181526_102108742	3300014200	Bog	LAGRVLLKIAYLLMRWTLGLAVLMFRGDRAKNAELPSAEG*
Ga0182016_108189632	3300014493	Bog	VLLKIVYLLTCRILGVAVLVFRGDRAKPAELRHENAVLRRHI
Ga0182024_110845093	3300014501	Permafrost	LADQVLLKIACLLMRWLFGLTVLGFRGDRAKSAELLVLRHEN
Ga0132255_1063121861	3300015374	Arabidopsis Rhizosphere	LADRVLLKIIYGLVRRLSSLAALRFRCDSAKDAELLVLRHEN
Ga0181515_10774121	3300016730	Peatland	VLLKITYMLMRWTFGLAVLMFRGDQAKNAELLVLRHENAVLR
Ga0187812_10751871	3300017821	Freshwater Sediment	VLLKIVYLLACRVLSLAVPVFRGNLAKDAELLVLRHENA
Ga0187812_11179981	3300017821	Freshwater Sediment	LAGRMLFKIVYLLVRRILGLAVLIFRSDLAKDAELLVL
Ga0187812_12204152	3300017821	Freshwater Sediment	VLLKIVYVLVRRLLSLAVLVFRGDRAKDAELLALRHEN
Ga0187802_103183351	3300017822	Freshwater Sediment	VLLKIAGVFTCRVLSLAVLAFRGNPAKDAGLLVLR
Ga0187820_11540032	3300017924	Freshwater Sediment	LAGRMLFKIVYLLVRRTLGLAVLISRSDLAKDAELLVL
Ga0187820_12652361	3300017924	Freshwater Sediment	VLLKIVYLLTCRVLGMVVLVFRGGLAKDAELLVLRDENA
Ga0187807_10807061	3300017926	Freshwater Sediment	VLLKIVYLLTCRVLSLAVLAFRGDLAKDAELLVLR
Ga0187807_10852402	3300017926	Freshwater Sediment	LAVRVLLKIVYLLTCRMLGAALLLFRSDRAKDAAEAATA
Ga0187806_12550722	3300017928	Freshwater Sediment	LLKIVYLLVRQLLSLAVLVLCGDRAKNAELLVLRH
Ga0187801_101809271	3300017933	Freshwater Sediment	MYLLTCRVLGLAVLVCRGDLAKDAELLALRHENAVL
Ga0187879_100206202	3300017946	Peatland	LAGRVLLKIAYLLMRWTLGLAVLMFRGDRAKNAELPSAEG
Ga0187879_101354261	3300017946	Peatland	LAGQVLLKIACLLMRWLFSLAVLVIRGDREKNAELLVLRHVGMVR
Ga0187781_104669983	3300017972	Tropical Peatland	LVCRVLLKIVYLLTCRVLGLAVLVFGGDRAKDAELLVLRHENAV
Ga0187869_103165273	3300018030	Peatland	VLLKITYLLMRWTFGLAVLMFHGDQAKNAELLVLRH
Ga0187869_103197852	3300018030	Peatland	VLLKIAYLLMRWTLGLAVLMFRGDRAKNAELPSAEG
Ga0187867_102561551	3300018033	Peatland	LACRVLLKIVYLFTCRVLGLAVLVFRSDLATDAELL
Ga0187883_103556711	3300018037	Peatland	LAGGVLLKSVYLVVRRPLGLAVLVLRTDLAKDAELLV
Ga0187883_107749792	3300018037	Peatland	LACRVLLKIVYLFTCRVLGLAVLVFRSDLAKDAELLVLR
Ga0187871_100312321	3300018042	Peatland	VLLKIVYLLTCRVLGLAVLVFRSDLAKDAELLVLRHE
Ga0187890_108034261	3300018044	Peatland	VLLKIVYLLACRVFGLALLVFRGDLAKDAELLVLRHENA
Ga0193728_10041367	3300019890	Soil	MLVKIVYLLMRWLFSLAARVFRGDRAKNAELLALR
Ga0193728_10675173	3300019890	Soil	VPLKIVYLLMRWLFGLVVLLSRGDRAKDAELLVLRHENA
Ga0210403_112219772	3300020580	Soil	LAGRMLFKIVYLLVRRILGLAVLISRSDLAKDAELLVL
Ga0210397_103400671	3300021403	Soil	LACRVQLKIVYVIVRRLLSLIVLVFRGDRAKDAELLVLRH
Ga0210402_101703311	3300021478	Soil	LADRVPLTIVYLLVRRVLSLAVLLSRRDLDKDAELL
Ga0210402_120015371	3300021478	Soil	VLLKIVYLLTCRALGLAVLVFRSDRAKDAGLLVLRHE
Ga0208194_10748661	3300025412	Peatland	LLKIACLLMRWLFSLAVLVIRGDREKNAELLVLRHVGMVR
Ga0208479_10057623	3300025474	Arctic Peat Soil	LAGRVLLKIVYLLMRWLFGLTVLVFRGDEARDTES
Ga0208479_10591592	3300025474	Arctic Peat Soil	LAGRVLLKIVYLLIRRLLGLAVLVFRKDLAKDAELL
Ga0207928_10553541	3300025494	Arctic Peat Soil	MLLTIVYLLVRRILGLAILVFRGDHAKDAELAILRH
Ga0208356_10625352	3300025504	Arctic Peat Soil	MLLKIVCLLMRWLFGLAVLVFRGDRAKNAELLVLRHE
Ga0208356_10632211	3300025504	Arctic Peat Soil	LADQVLVKLVCLLMRWLFSLAVLVIRGNRAKNAELLVSPA
Ga0208586_100136512	3300025588	Arctic Peat Soil	LADRVLLKIACLLMRWLFSLAVLVVRGDGEKNAELL
Ga0208586_11204792	3300025588	Arctic Peat Soil	VLLKIVYLLTCRVLGPAVLAFRGDRAKDAELLVLRH
Ga0207930_10940731	3300025604	Arctic Peat Soil	LTCRELLKIVYLLTCRVLGLAVLVFYGDLAKDAELLVVRHVAN
Ga0208219_100047813	3300025625	Arctic Peat Soil	VLLKIVCLLMRWLFSLAVLVSRGDGAKNAELLVLRHEN
Ga0208219_10037466	3300025625	Arctic Peat Soil	VLLKIACLLMRWSFSLAVLVVRGDRAKSAELLVLRHEN
Ga0208219_10061135	3300025625	Arctic Peat Soil	LACWVLLKIVYVLMRWLFSVTVLVFRGDEAKDAELLVLRHEN
Ga0208220_10219801	3300025627	Arctic Peat Soil	VLLKIACLLMRWLFSLAVLVVRGDGEKNAELLALRH
Ga0208220_10916922	3300025627	Arctic Peat Soil	VLLKIVCLLMRWLFGLAVLVSRGDGAKNAELLVLWHE
Ga0208480_10025718	3300025633	Arctic Peat Soil	MVGWRVLKIVYLLTCRVLGVAVLVFRSDRGNAAELLVLRH
Ga0208480_10187634	3300025633	Arctic Peat Soil	LAGGVLLKIACMLMRWSFGLAVLLFRGDQAENVELLV
Ga0208480_10408942	3300025633	Arctic Peat Soil	LAGRVLLKIVYLLTCRVLGVAVLVFRGDRAKAAELLVL
Ga0208589_11301221	3300025634	Arctic Peat Soil	LADRVLLKIVYLPTCRVLGVAVLVFRCERAKAAELLVL
Ga0207700_108637471	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VLLKIVYLLTCRLLSLIVLVFRGDRAKDAGLLVLRH
Ga0209890_100666282	3300026291	Soil	VLLKIVYLLTCRILSLIAVLVRGSEAAAAEVLVPNLTR
Ga0209839_102823033	3300026294	Soil	LAGGVLLKIACMLMRWSFGLAVLLFRGDQAENVELLVLRHENAVLCRHAG
Ga0209234_11953942	3300026295	Grasslands Soil	LAGRVLLKIVCLLVRRILGLAVIVFRGDLAKDAELLV
Ga0209239_12654381	3300026310	Grasslands Soil	LAGRVLLKIAYVLTCRMLGLVVLLFRGDRAKDVELLV
Ga0257173_10090333	3300026360	Soil	LAGRLLLKVLYLLTCRLPGLADLVFRGDLAKDAGLLVLGHES
Ga0257156_10027641	3300026498	Soil	VLLKVAYLFMLGLIALVFRGDQAKDAELLVLRHENAVLRR
Ga0179587_106857601	3300026557	Vadose Zone Soil	VTWCWLACRVLLKIVYLLTCRVLGLAVLVFRGDLAKDAELLVVRHEALSVPDGGG
Ga0179587_107596391	3300026557	Vadose Zone Soil	LACRVLLKIVYLLTCRVLGLPVLVFRGDRAKDAELLV
Ga0179587_108357651	3300026557	Vadose Zone Soil	LAGRVLLKIVYLLTCRTLGLGVVLFRGDRATVAEVL
Ga0207840_10248981	3300026910	Tropical Forest Soil	VTWYWLACRVLLFKIVYLLTCRVLSLAVRVFRGDLAKDAEL
Ga0208324_10261252	3300027604	Peatlands Soil	VLLKIVYLLTCRVLGVAALVFRGDRAKTAELLVLRHED
Ga0208696_12697512	3300027696	Peatlands Soil	LAGRVLPKIVYLLTCRVLSLAVLVFRGDLAKDAELLVLRHE
Ga0207862_10516611	3300027703	Tropical Forest Soil	VTWYWLACRVLLFKIVYLLTCRVLSLAVRVFRGDLAKDAELLVLRHENA
Ga0209656_100695861	3300027812	Bog Forest Soil	VLLKILYVLVRRLLSLAVLVFRGDRAKDAELLVLRHK
Ga0209656_100962631	3300027812	Bog Forest Soil	VLLKIAYLLTCRMLGLAVLGFRSDRTKDVELLVLR
Ga0209040_102428933	3300027824	Bog Forest Soil	LAGRVPLKIVYLLVRRVLGLAVLVFRTDLAKDAEL
Ga0209167_100312901	3300027867	Surface Soil	MGCWLACRVLLKIVYVLRCRVLGLAVLVFGGDLAKDAELR
Ga0189898_10401661	3300028450	Peatlands Soil	VAGRVLLKIACVLTCRIRGLVVLMCRGDQAKDAELLV
Ga0302202_103527372	3300028762	Bog	LACRVLLKIVYLLTCRVLSLAVLVFRGGLAKDAELLVLRHEN
Ga0307282_101704871	3300028784	Soil	VLLKIVYLLTCRVPGPAVLVFRGDRTKAELLAHRHAWLEQA
Ga0302157_100673474	3300028813	Bog	VLLKITYLLMRWTFGLAVLMFHGDQAKNAELLVLRHENAVL
Ga0302154_103102271	3300028882	Bog	VLLKITYLLMRWTFGLAVLMFHGDQAKNAELLVLRHE
Ga0311361_107820281	3300029911	Bog	VLLKITYLLMRWTFGLAVLMFHGDQAKNAELLVLRHENAVLRRN
Ga0311359_105673631	3300029914	Bog	LACRVLLKIVYLLTCRVLSLAVLVFRGGLAKDAELL
Ga0311371_112527141	3300029951	Palsa	VLLKIVYLLTCRILGVAVLVFRGDRTMAAELLVVRGES
Ga0311339_105948022	3300029999	Palsa	LADRVLLKIVYLLVRRILGLAVLASRTDLAKDAELLYSGT
Ga0302184_102455492	3300030490	Palsa	LACRVLLKIVYLLTCRVLGLAVLVFRSDLAKDAELLVLRHE
Ga0310037_103066991	3300030494	Peatlands Soil	LAGRVLPKIVYLLTCRVLSLAVLVFRGDLAKDAELLVLRH
Ga0311370_102961703	3300030503	Palsa	VLLKIVYLLTCRVLSLAVLVFRGGLAKDAELLVLRHE
Ga0311356_101934982	3300030617	Palsa	VLLKIVYLLTCRVLSLAVLVFRGDPAKDAELLVLRA
Ga0210279_104054582	3300030631	Soil	LAGRVLLKIVYLLVRQILGLAVLVLRKDLAKDAELLVL
Ga0310039_100181956	3300030706	Peatlands Soil	VLPKIVYLLTCRVLSLAVLVFRGDLAKDAELLVLWHENA
Ga0265461_129567642	3300030743	Soil	LAGRVLLKIVYLLVRQILGLAVLVLRKDLAKDAELLVLRSGPPSIN
Ga0318516_105785232	3300031543	Soil	VTRYWLACRVLLKIAYLLTCRVLGLAVLVFRRDLAKD
Ga0318516_105813291	3300031543	Soil	VLLEIVYLLVRRVLGFAVLVFRRDLTKDAELLALRHEN
Ga0318534_104195432	3300031544	Soil	VIFTSVYLIVRSVPGLLAMRFRRDLSKDAELLVLRHR
Ga0318573_107102881	3300031564	Soil	VLLKIAYVLTCRMLGLVILLCRDDRVKDAELLMLRHENAVL
Ga0310686_1065557402	3300031708	Soil	LACGVLLKIAYLLTCRMLGLAVLGFCSDRTKDVELLVLRHENA
Ga0310686_1192520541	3300031708	Soil	VLLKIVWLLMRWLFSLAGLMCRGDGAKDAELLVLRHENAVL
Ga0310686_1196977781	3300031708	Soil	LAGRVLLKILYLLTCRVLSVAVMVFRGDRVQAAELLFLRHEN
Ga0318494_104268532	3300031751	Soil	WLACGVLLKIVYLLTCRVLGLAVLMFRGDRAKDSELLVLQDS
Ga0306925_120938241	3300031890	Soil	VLLKIIYLLVRRLFSLVVLIHRCDSAKDAELLVLRH
Ga0306923_119460221	3300031910	Soil	LAGRVLLEIVYLLVRRVLGFAVLVFRRDLTKDAELLAL
Ga0310910_115718921	3300031946	Soil	VLLKIIYLLVRRLFSLVVLIHRCDSAKDAELLVLRHEN
Ga0310911_108964481	3300032035	Soil	VLLKIVYLLTCRVLGLAVVVFRGDRAKDAELLVLRHENA
Ga0311301_103071161	3300032160	Peatlands Soil	MWCWLACRVLLKIIYLLTCRVLGLAVLVFRGDLAKDAELLGSPA
Ga0311301_107610221	3300032160	Peatlands Soil	RLWLADRVLLKIIYGLVCRLFSLAALMFRCDSAKDAELLVL
Ga0307472_1007024221	3300032205	Hardwood Forest Soil	VPLKIVYVLMRWLLGLVVLLSRGDRAEDAELLVLR
Ga0306920_1007255831	3300032261	Soil	LAGLVLLKIVYLLVRQVLGLAILMFRGDGAKEAELLVLRHENV
Ga0306920_1023256641	3300032261	Soil	MLLKIVYLLTCRVLCLAVLVFRGDLAKDADLLVLR
Ga0348332_119343622	3300032515	Plant Litter	LAGRVLLKIVYLLVRQILGLAVLVLRKDLAKDAELLVLRSGPPSI
Ga0335085_117599182	3300032770	Soil	MWCWLACRVLLKFVHVLVCRMLGVAVLVFRGDLAKDAELLVLRHEN
Ga0335078_119352352	3300032805	Soil	LANQVLLKIACLLMRWLLGLTVLVFRGDRANNAELLALR
Ga0335081_126763022	3300032892	Soil	LADRVLLKIVYLLVRRILGLAALVSRTDLAKDAEL
Ga0335075_116694152	3300032896	Soil	VLLKIVYLPVRRLLGLFVLLWREDLAKDAALTSSVS
Ga0318519_110677821	3300033290	Soil	LADRVPLTIVYLLVRRVLSLAVLLARRDLDKDAEL

Hidden Markov Model


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