Metagenome / Metatranscriptome Family F031832

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F031832
Family Type	Metagenome / Metatranscriptome
Number of Sequences	181
Average Sequence Length	45 residues
Representative Sequence	VKRPPDKKLLLAATILLVAASMVLSRPAVGTDRGSPTALIVKLFGRS
Number of Associated Samples	127
Number of Associated Scaffolds	181

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.78 %
% of genes near scaffold ends (potentially truncated)	16.02 %
% of genes from short scaffolds (< 2000 bps)	80.66 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.950 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (24.862 % of family members)
Environment Ontology (ENVO)	Unclassified (43.646 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.011 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 37.33% β-sheet: 0.00% Coil/Unstructured: 62.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 181 Family Scaffolds
PF13614	AAA_31	24.31
PF01656	CbiA	7.18
PF13807	GNVR	6.08
PF13425	O-antigen_lig	4.42
PF10609	ParA	2.76
PF04932	Wzy_C	2.21
PF13145	Rotamase_2	1.66
PF13692	Glyco_trans_1_4	1.10
PF01943	Polysacc_synt	1.10
PF13579	Glyco_trans_4_4	1.10
PF00196	GerE	0.55
PF10531	SLBB	0.55
PF01370	Epimerase	0.55
PF00115	COX1	0.55
PF13439	Glyco_transf_4	0.55

COG ID	Name	Functional Category	% Frequency in 181 Family Scaffolds
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	2.21

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.95 %
Unclassified	root	N/A	11.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.95 %
Unclassified	root	N/A	11.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.95 %
Unclassified	root	N/A	11.05 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.43 %
Unclassified	root	N/A	11.05 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.55 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	69.06 %
Unclassified	root	N/A	11.05 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.05 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.31 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.66 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.55 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.05 %
Sterolibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae	1.66 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.10 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.55 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.05 %
Methyloversatilis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis	1.10 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.55 %
Denitratisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Denitratisoma	0.55 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.55 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.05 %
Methyloversatilis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis	1.10 %
unclassified Denitratisoma	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Denitratisoma → unclassified Denitratisoma	0.55 %
unclassified Janthinobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium	0.55 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.55 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.05 %
Methyloversatilis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis	1.10 %
Denitratisoma sp. DHT3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Denitratisoma → unclassified Denitratisoma → Denitratisoma sp. DHT3	0.55 %
Janthinobacterium sp. CG23_2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium → Janthinobacterium sp. CG23_2	0.55 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.55 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0720987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5917	Open in IMG/M
3300001686\|C688J18823_10392479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	899	Open in IMG/M
3300002568\|C688J35102_118871064	Not Available	607	Open in IMG/M
3300002568\|C688J35102_119515549	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300002568\|C688J35102_120952458	All Organisms → cellular organisms → Bacteria → Proteobacteria	2941	Open in IMG/M
3300002906\|JGI25614J43888_10180137	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300002907\|JGI25613J43889_10149913	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300002908\|JGI25382J43887_10058775	All Organisms → cellular organisms → Bacteria → Proteobacteria	2084	Open in IMG/M
3300002917\|JGI25616J43925_10303157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	595	Open in IMG/M
3300003267\|soilL1_10083414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1987	Open in IMG/M
3300003324\|soilH2_10023713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1060	Open in IMG/M
3300004153\|Ga0063455_100064859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1332	Open in IMG/M
3300004153\|Ga0063455_100751941	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300004480\|Ga0062592_100383956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1109	Open in IMG/M
3300005166\|Ga0066674_10445723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	592	Open in IMG/M
3300005167\|Ga0066672_10028226	All Organisms → cellular organisms → Bacteria → Proteobacteria	3033	Open in IMG/M
3300005167\|Ga0066672_10687533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	657	Open in IMG/M
3300005171\|Ga0066677_10130988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1358	Open in IMG/M
3300005171\|Ga0066677_10735551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	550	Open in IMG/M
3300005172\|Ga0066683_10096228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis	1793	Open in IMG/M
3300005175\|Ga0066673_10464919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	745	Open in IMG/M
3300005175\|Ga0066673_10625749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	625	Open in IMG/M
3300005175\|Ga0066673_10693746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	587	Open in IMG/M
3300005176\|Ga0066679_10123983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1595	Open in IMG/M
3300005178\|Ga0066688_10480460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	801	Open in IMG/M
3300005179\|Ga0066684_10817163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	615	Open in IMG/M
3300005184\|Ga0066671_10259127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1074	Open in IMG/M
3300005184\|Ga0066671_10287329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1027	Open in IMG/M
3300005187\|Ga0066675_10482391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	925	Open in IMG/M
3300005345\|Ga0070692_10889056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	615	Open in IMG/M
3300005434\|Ga0070709_11404324	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005435\|Ga0070714_100026732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4772	Open in IMG/M
3300005440\|Ga0070705_100407309	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300005440\|Ga0070705_100602138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	850	Open in IMG/M
3300005440\|Ga0070705_100853945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	728	Open in IMG/M
3300005441\|Ga0070700_100299878	All Organisms → cellular organisms → Bacteria → Proteobacteria	1172	Open in IMG/M
3300005444\|Ga0070694_100296683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1237	Open in IMG/M
3300005444\|Ga0070694_101260326	Not Available	621	Open in IMG/M
3300005445\|Ga0070708_100448700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1217	Open in IMG/M
3300005454\|Ga0066687_10661714	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300005468\|Ga0070707_101878861	Not Available	566	Open in IMG/M
3300005529\|Ga0070741_10285661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1554	Open in IMG/M
3300005529\|Ga0070741_10295067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1523	Open in IMG/M
3300005537\|Ga0070730_10013397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis	6614	Open in IMG/M
3300005540\|Ga0066697_10044195	All Organisms → cellular organisms → Bacteria	2511	Open in IMG/M
3300005540\|Ga0066697_10070975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1999	Open in IMG/M
3300005546\|Ga0070696_100189526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1530	Open in IMG/M
3300005546\|Ga0070696_100329629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1177	Open in IMG/M
3300005546\|Ga0070696_100598346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	889	Open in IMG/M
3300005547\|Ga0070693_100363208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	994	Open in IMG/M
3300005552\|Ga0066701_10335153	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300005556\|Ga0066707_10669925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	654	Open in IMG/M
3300005558\|Ga0066698_10904582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	565	Open in IMG/M
3300005561\|Ga0066699_10037069	All Organisms → cellular organisms → Bacteria → Proteobacteria	2886	Open in IMG/M
3300005561\|Ga0066699_10603443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	788	Open in IMG/M
3300005561\|Ga0066699_10652982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	754	Open in IMG/M
3300005568\|Ga0066703_10777386	Not Available	548	Open in IMG/M
3300005569\|Ga0066705_10011295	All Organisms → cellular organisms → Bacteria → Proteobacteria	4267	Open in IMG/M
3300005569\|Ga0066705_10255970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1110	Open in IMG/M
3300005598\|Ga0066706_11024175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	635	Open in IMG/M
3300005617\|Ga0068859_101364197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	782	Open in IMG/M
3300005985\|Ga0081539_10000308	All Organisms → cellular organisms → Bacteria → Proteobacteria	109598	Open in IMG/M
3300006032\|Ga0066696_10159296	All Organisms → cellular organisms → Bacteria → Proteobacteria	1414	Open in IMG/M
3300006032\|Ga0066696_10967233	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300006046\|Ga0066652_100223664	All Organisms → cellular organisms → Bacteria → Proteobacteria	1633	Open in IMG/M
3300006046\|Ga0066652_100987406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	800	Open in IMG/M
3300006046\|Ga0066652_101398565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	655	Open in IMG/M
3300006755\|Ga0079222_10730568	All Organisms → cellular organisms → Bacteria → Proteobacteria	791	Open in IMG/M
3300006794\|Ga0066658_10177162	All Organisms → cellular organisms → Bacteria → Proteobacteria	1109	Open in IMG/M
3300006794\|Ga0066658_10733912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	549	Open in IMG/M
3300006804\|Ga0079221_10177173	All Organisms → cellular organisms → Bacteria → Proteobacteria	1145	Open in IMG/M
3300006806\|Ga0079220_10328185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	961	Open in IMG/M
3300006806\|Ga0079220_10415066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	885	Open in IMG/M
3300006806\|Ga0079220_11976517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	519	Open in IMG/M
3300006852\|Ga0075433_10308197	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300006852\|Ga0075433_10687072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	897	Open in IMG/M
3300006854\|Ga0075425_100429480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1521	Open in IMG/M
3300006854\|Ga0075425_100713410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1151	Open in IMG/M
3300006871\|Ga0075434_100871338	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300006903\|Ga0075426_10013800	All Organisms → cellular organisms → Bacteria → Proteobacteria	5772	Open in IMG/M
3300006904\|Ga0075424_100389019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1486	Open in IMG/M
3300006914\|Ga0075436_100008376	All Organisms → cellular organisms → Bacteria → Proteobacteria	7070	Open in IMG/M
3300006954\|Ga0079219_11992992	Not Available	552	Open in IMG/M
3300007076\|Ga0075435_100052403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3289	Open in IMG/M
3300007076\|Ga0075435_100410255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1166	Open in IMG/M
3300007076\|Ga0075435_101742393	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300007255\|Ga0099791_10181160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	990	Open in IMG/M
3300007255\|Ga0099791_10239433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	859	Open in IMG/M
3300009012\|Ga0066710_100026511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	6615	Open in IMG/M
3300009012\|Ga0066710_103742112	Not Available	571	Open in IMG/M
3300009090\|Ga0099827_11427050	Not Available	603	Open in IMG/M
3300009137\|Ga0066709_101046729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1197	Open in IMG/M
3300009137\|Ga0066709_104343061	Not Available	517	Open in IMG/M
3300009147\|Ga0114129_10217837	All Organisms → cellular organisms → Bacteria → Proteobacteria	2577	Open in IMG/M
3300009147\|Ga0114129_10233520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2476	Open in IMG/M
3300010159\|Ga0099796_10512767	Not Available	537	Open in IMG/M
3300010321\|Ga0134067_10324002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	600	Open in IMG/M
3300010323\|Ga0134086_10361872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	576	Open in IMG/M
3300010337\|Ga0134062_10770656	Not Available	512	Open in IMG/M
3300010396\|Ga0134126_12558556	Not Available	555	Open in IMG/M
3300010397\|Ga0134124_12207849	Not Available	590	Open in IMG/M
3300010401\|Ga0134121_10018718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5527	Open in IMG/M
3300011271\|Ga0137393_10418284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1148	Open in IMG/M
3300012205\|Ga0137362_11325216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	605	Open in IMG/M
3300012208\|Ga0137376_11041487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	700	Open in IMG/M
3300012212\|Ga0150985_101458336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1800	Open in IMG/M
3300012212\|Ga0150985_122004796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	768	Open in IMG/M
3300012212\|Ga0150985_122945324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	795	Open in IMG/M
3300012354\|Ga0137366_10596540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	792	Open in IMG/M
3300012469\|Ga0150984_100948944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	529	Open in IMG/M
3300012469\|Ga0150984_101772806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	531	Open in IMG/M
3300012469\|Ga0150984_113214928	All Organisms → cellular organisms → Bacteria → Proteobacteria	3227	Open in IMG/M
3300012922\|Ga0137394_10265489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1468	Open in IMG/M
3300012922\|Ga0137394_10335508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1291	Open in IMG/M
3300012922\|Ga0137394_10915509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	731	Open in IMG/M
3300012927\|Ga0137416_10031566	All Organisms → cellular organisms → Bacteria → Proteobacteria	3535	Open in IMG/M
3300012929\|Ga0137404_10000462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	26674	Open in IMG/M
3300012976\|Ga0134076_10124116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1041	Open in IMG/M
3300014166\|Ga0134079_10286039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	727	Open in IMG/M
3300014487\|Ga0182000_10241748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	718	Open in IMG/M
3300015079\|Ga0167657_1001844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3826	Open in IMG/M
3300015245\|Ga0137409_10205769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	1769	Open in IMG/M
3300015245\|Ga0137409_11222123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	592	Open in IMG/M
3300015245\|Ga0137409_11222465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	592	Open in IMG/M
3300017656\|Ga0134112_10334239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	615	Open in IMG/M
3300018433\|Ga0066667_11129534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	679	Open in IMG/M
3300018433\|Ga0066667_11268712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	643	Open in IMG/M
3300018433\|Ga0066667_11302232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	635	Open in IMG/M
3300018468\|Ga0066662_10558201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1060	Open in IMG/M
3300018468\|Ga0066662_10815287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	907	Open in IMG/M
3300018482\|Ga0066669_10143258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1745	Open in IMG/M
3300018482\|Ga0066669_10520384	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300018482\|Ga0066669_10653404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	925	Open in IMG/M
3300019789\|Ga0137408_1006831	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300021953\|Ga0213880_10253091	Not Available	508	Open in IMG/M
3300024284\|Ga0247671_1054524	Not Available	635	Open in IMG/M
3300024286\|Ga0247687_1069054	Not Available	541	Open in IMG/M
3300025910\|Ga0207684_10298177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1390	Open in IMG/M
3300025918\|Ga0207662_11159770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	549	Open in IMG/M
3300025938\|Ga0207704_11838488	Not Available	521	Open in IMG/M
3300025939\|Ga0207665_10996415	Not Available	666	Open in IMG/M
3300026075\|Ga0207708_10221549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1516	Open in IMG/M
3300026116\|Ga0207674_11340239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	685	Open in IMG/M
3300026301\|Ga0209238_1167854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	651	Open in IMG/M
3300026301\|Ga0209238_1202237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Denitratisoma → unclassified Denitratisoma → Denitratisoma sp. DHT3	582	Open in IMG/M
3300026304\|Ga0209240_1002844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium → Janthinobacterium sp. CG23_2	6540	Open in IMG/M
3300026306\|Ga0209468_1118619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	794	Open in IMG/M
3300026309\|Ga0209055_1008186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5739	Open in IMG/M
3300026312\|Ga0209153_1017397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2340	Open in IMG/M
3300026318\|Ga0209471_1041702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2175	Open in IMG/M
3300026319\|Ga0209647_1269146	Not Available	570	Open in IMG/M
3300026320\|Ga0209131_1003194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	10950	Open in IMG/M
3300026320\|Ga0209131_1021278	All Organisms → cellular organisms → Bacteria → Proteobacteria	3887	Open in IMG/M
3300026322\|Ga0209687_1164698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	706	Open in IMG/M
3300026325\|Ga0209152_10289608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	611	Open in IMG/M
3300026325\|Ga0209152_10336911	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300026328\|Ga0209802_1140217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1036	Open in IMG/M
3300026530\|Ga0209807_1027080	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2771	Open in IMG/M
3300026547\|Ga0209156_10202029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	947	Open in IMG/M
3300026550\|Ga0209474_10078683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2271	Open in IMG/M
3300026550\|Ga0209474_10155579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1485	Open in IMG/M
3300026550\|Ga0209474_10566655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	578	Open in IMG/M
3300026552\|Ga0209577_10315791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1161	Open in IMG/M
3300026552\|Ga0209577_10459129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	880	Open in IMG/M
3300027725\|Ga0209178_1129179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	861	Open in IMG/M
3300027765\|Ga0209073_10253820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	684	Open in IMG/M
3300027765\|Ga0209073_10377509	Not Available	577	Open in IMG/M
3300027857\|Ga0209166_10060961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2168	Open in IMG/M
3300027882\|Ga0209590_10797308	Not Available	600	Open in IMG/M
3300028536\|Ga0137415_10025105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5885	Open in IMG/M
3300030997\|Ga0073997_12173328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	555	Open in IMG/M
3300031366\|Ga0307506_10111802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	911	Open in IMG/M
3300031716\|Ga0310813_10017615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4809	Open in IMG/M
3300031720\|Ga0307469_10014440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4044	Open in IMG/M
3300031720\|Ga0307469_10112850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1944	Open in IMG/M
3300031720\|Ga0307469_10296226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1330	Open in IMG/M
3300031740\|Ga0307468_100034193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2467	Open in IMG/M
3300031820\|Ga0307473_10221030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1140	Open in IMG/M
3300032002\|Ga0307416_102687557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	595	Open in IMG/M
3300032174\|Ga0307470_10179013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1331	Open in IMG/M
3300033412\|Ga0310810_10113687	All Organisms → cellular organisms → Bacteria → Proteobacteria	3209	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.19%
Host-Associated	Host-Associated	13.26%
Engineered	Engineered	0.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.19%
Plants	Host-Associated → Plants	13.26%
Solid Waste	Engineered → Solid Waste	0.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.87%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.55%
Grass	Engineered → Solid Waste → Grass	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.06%
Loam	Environmental → Terrestrial → Soil → Loam	16.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.66%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.55%
Composting	Engineered → Solid Waste → Grass → Composting	0.55%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	37.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	6.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.66%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.55%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	24.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.15%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.39%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.18%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	6.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.66%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.66%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.66%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.66%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.55%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.55%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.55%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.55%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015079	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300024286	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_07209873	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MLVATALLVAASMVLARPAVGTDPAPATALIVKFFGRS*
C688J18823_103924792	3300001686	Soil	MLAATALLVAAGMLLSRPAVGTDPAPAAALMVKFFGRS*
C688J35102_1188710641	3300002568	Soil	MLALTVLVVAASMMMLSRPAVGTDPGASTALIVKFFGRS*
C688J35102_1195155492	3300002568	Soil	MLALTVLVVAASMMMLSRPAVGTDPASSTAVIVKFFGRS*
C688J35102_1209524582	3300002568	Soil	VKPDRKLLLAVTILLAAASFTLSRPAVGTDHGSMTVAKLFGRS*
JGI25614J43888_101801372	3300002906	Grasslands Soil	VKRPPDKKVLLAATILLVAASMVLSRPAVGTDRGSSATLIVKLFGRS*
JGI25613J43889_101499132	3300002907	Grasslands Soil	VKRPPDKKILLAATILLVAASMVLSRPAVGTDRGSSATLIVKLFGRS*
JGI25382J43887_100587753	3300002908	Grasslands Soil	VKRPPDKKLLLAATILLVAASMVLSRPAVGTDRGSPTALIVKLFGRS*
JGI25616J43925_103031572	3300002917	Grasslands Soil	PDRKLMLAATILLVAAGMILSRPAVGTDRGSPTALIVKLFGRS*
soilL1_100834142	3300003267	Sugarcane Root And Bulk Soil	MLAFTALVVAASMMLLSRPAVGTDPGASTTVIVKFFGRS*
soilH2_100237132	3300003324	Sugarcane Root And Bulk Soil	LKRPPDKKFMLAATILLVAAGMVLSRPAVGTDRGSSATLIVKLFGRS*
Ga0063455_1000648591	3300004153	Soil	VDERVLGMRRPPDRKLMLAATALLVAAGMLLSRPAVGTDPAPAAALMVKFFGRS*
Ga0063455_1007519412	3300004153	Soil	VKRPPDKKFLLAATMLLVAASMVMSRPAVGTDRGSSATLIVKLFGRS*
Ga0062592_1003839562	3300004480	Soil	MKRPPDRKFMLAATILIVAASLALARPAVGTDHGTHALTVVKLFGRS*
Ga0066674_104457232	3300005166	Soil	MKRPPDKKLLLAATILLVAASMVLSRPAVGTDRGSPTALIVKFFGRS*
Ga0066672_100282262	3300005167	Soil	MRRPPDRKFMLAATALLVAASFLLARPAVGTDPSRPQALLVKFFGRS*
Ga0066672_106875331	3300005167	Soil	MKRPPDKKLLLAATILLVAASMVLSRPAVGTDRGSPTALIVKF
Ga0066677_101309882	3300005171	Soil	VKRPPDKKMVLAATILLVAASMVLARPAVGTAVGTDRGSPALIVKLFGRS*
Ga0066677_107355512	3300005171	Soil	MRRPPDRKMMLAATILLVAAGMILSRPAVGTDRGSPTALIAKFFGRS*
Ga0066683_100962281	3300005172	Soil	VKRPPDKKILLAATILLVAASMALSRPAVGTDRGSATALIVKLFGRS*
Ga0066673_104649191	3300005175	Soil	MRRPPDKKLLLAATALLVAAGMLLARPAVGTDSGSHTALVVK
Ga0066673_106257492	3300005175	Soil	MMLAATILLVAAGMILSRPAVGTDRGSPTALIVKFFGRS*
Ga0066673_106937461	3300005175	Soil	VKRPPDKKLVVAATILLVAASMALSRPAVGTDHGSSTTLIVKLFGRP*
Ga0066679_101239831	3300005176	Soil	MKRPPDKKLLLAATMLLVAASMVLSRPAVGTDRGSPTALIVKLFGRS*
Ga0066688_104804602	3300005178	Soil	MLLAATILLVAAGMILSRPAVGTDRGSPTALIVKFFGRS*
Ga0066684_108171631	3300005179	Soil	MRRPPDKKLLLAATALVVAAGMLLARPAVGTDSGSHSALVVKLFGRS*
Ga0066671_102591272	3300005184	Soil	MRRPPDKKLLLAATALLVAAGMLLARPAVGTDSGSHSALVVKLFGRS*
Ga0066671_102873292	3300005184	Soil	MLALTALVVAASMMMLSRPAVGTDPGASTALIVKFFGRS*
Ga0066675_104823912	3300005187	Soil	VKRPPDKKILLAATILLVAASMVLSRPAVGTDRGSPTALIVKLFGRS*
Ga0070692_108890562	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKRPPDKKIVLAATILLVAASMVLSRPAVGTDRGSSAVLIVKFFGRS*
Ga0070709_114043242	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKRPPDKKFMLAATILLVAASMVLSRPAVGTDRGSSAVLIVKFFGRS*
Ga0070714_1000267323	3300005435	Agricultural Soil	MRRPPDRKLVLAVTILVVAACMTLSRTAVGTDRPAAAALMVKLFGRS*
Ga0070705_1004073092	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VKRPPDKKLLLAATMLLVAATLVLSRPAVGTDRGSPTALIVKLFGRS*
Ga0070705_1006021382	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	PDRKFMLAATILLVAASLALARPAVGTDHGTHALTVVKLFGRS*
Ga0070705_1008539452	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRRPPDRKFMLAATALLVAASLVLARPAVGTDPVPTTALIVKLFGRS*
Ga0070700_1002998782	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKRPPDRKFMLAATLLIVAAGLMLARPAVGTDHGTHAVTVVKLFGRS*
Ga0070694_1002966832	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MLALTALIVAASMMMLSRPAVGTDPASSTAVIVKVFGRS*
Ga0070694_1012603262	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKRPPDRKFLLAATLLIVAAGMVLARPAIGTDHGAHASFGKVFGRS*
Ga0070708_1004487002	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRRPPDRKFMLAATALLIAASLVLARPAVGTDPVPTTALIVKLFGRS*
Ga0066687_106617142	3300005454	Soil	VKRPPDKKLVVAATILLVAASMALSRPAVGTDHASSTTLIVKLFGRP*
Ga0070707_1018788612	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VKRPPDKKMMLAATILLVAASMVLARPAVGTAVGSDRGTPTLIVKLFGRS*
Ga0070741_102856611	3300005529	Surface Soil	LAATALLVAASLVLARPAVGTDPVPTTALIVKLFGRS*
Ga0070741_102950673	3300005529	Surface Soil	MLAATALLVAASLVLARPAVGTDPVPTTALIVKLFGRS*
Ga0070730_100133973	3300005537	Surface Soil	VKRPPDKKVLLAATILLVAASMVLSRPAVGIDHGPSTTLIVKLFGRS*
Ga0066697_100441952	3300005540	Soil	MRRPPDRKLLLAATALVVAASMLLARPAVGTDRAPATALIVKLFGRS*
Ga0066697_100709753	3300005540	Soil	MLAATALLVAASFLLARPAVGTDPSRPQALLVKFFGRS*
Ga0070696_1001895261	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DELLLERLVKRPPDKKMMLAATILLVAASMVLARPAVGTAVGSDRGTPTLIVKLFGRS*
Ga0070696_1003296291	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RRHADERVLGMRRPPDHKLVLAVTMLVVAACMTLSRSAVGTDRPAAAALMVKLFGRS*
Ga0070696_1005983462	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	KFMLAATILIVAASLALARPAVGTDHGTHALTVVKLFGRS*
Ga0070693_1003632082	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MMLAATLLLVAASMVLARPAVGTDRGSPATMIVKLFGRS*
Ga0066701_103351532	3300005552	Soil	MLLAATILLVAAGMILSRPAVGTDRGSPTALIAKFFGRS*
Ga0066707_106699251	3300005556	Soil	VKRPPDKKLLLAATILLVAASMVLSRPAVGTDRGSPTALIVKFFGRS*
Ga0066698_109045822	3300005558	Soil	MKRPPDKKLLLAATMLLVAASMVLSRPAVGTDRGSATALIVKFFGRS*
Ga0066699_100370692	3300005561	Soil	MRRPPDRKMMLAATILHVAAGMILSGPAVGTDRGSPTALIVEFFGRS*
Ga0066699_106034432	3300005561	Soil	MLAATALLVAASFLLARPAVGTDPSRPQVLLVKFFGRS*
Ga0066699_106529821	3300005561	Soil	MVAATILLVAAGMALSRPAVGTDPAAATALIVKVFGRS*
Ga0066703_107773862	3300005568	Soil	MRRPPDRKLMLAATALLVAASMLLARPAVGTDPAPASALMVKFFGRS*
Ga0066705_100112953	3300005569	Soil	MRRPPDRKMLLAATILLVAAGMILSRPAVGTDRGSPTALIAKFFGRS*
Ga0066705_102559703	3300005569	Soil	MRRPPDKKLLLAATALVVAAGMLLARPAVGTDSGSHSA
Ga0066706_110241752	3300005598	Soil	VKRPPDKKILLAATILLVAASMVLSRPAVGTDRGS
Ga0068859_1013641972	3300005617	Switchgrass Rhizosphere	MKRSPDRKFMLAATILIVAASLALARPAVGTDHGTHALTVVKLFGRS*
Ga0081539_1000030882	3300005985	Tabebuia Heterophylla Rhizosphere	MLAATALLVAAGMLLARPAVGTDPGSHTALVVKLFGRS*
Ga0066696_101592962	3300006032	Soil	VKRPPDKKMMLAATILLVAAGMILSRPAVGTDRGSPTALIVKFFGRS*
Ga0066696_109672332	3300006032	Soil	MRRPPDRKLLLAGTALVVAASMLLARPAVGTDRAPATALIVKLFGRS*
Ga0066652_1002236642	3300006046	Soil	VKRPPDKKVLLAATILLVAASMLLSRPAVGTDRGSSTALIVKLFGRS*
Ga0066652_1009874062	3300006046	Soil	VKRPPDKKMMLAATILLVAASMVLARPAVGTAVGTDRGSTTLIVKLFGRS*
Ga0066652_1013985652	3300006046	Soil	MKRPPDRKLMLALTVLVVAASMMMLSRPAVGTDPGASTALIVKFFGRS*
Ga0079222_107305682	3300006755	Agricultural Soil	MRRPPDRKLVLAVTMLVVAACMTLSRSAVGTDRPAAAALMVKLFGRS*
Ga0066658_101771622	3300006794	Soil	MRRPPDKKLLLAATALLVAAGMLLARPAVGTDSGSHTALLVKLFGRS*
Ga0066658_107339122	3300006794	Soil	MRRPPDRKFMLAATALLVAASFLLARPAVGTDPSRPQVLLVKFFGRS*
Ga0079221_101771732	3300006804	Agricultural Soil	MRRPPDRKLVLAVTILVVAACMTLSRTAVGTDRPAAAALMVKFFGRS*
Ga0079220_103281852	3300006806	Agricultural Soil	VKRPPDKKMMLAATILLVAASMVLARPAVGTDRGSPTLIVKFFGRS*
Ga0079220_104150662	3300006806	Agricultural Soil	MRRPPDRKLMLAATALLVAASMLLARPAVGTDPAPSTALIVKFFGRS*
Ga0079220_119765171	3300006806	Agricultural Soil	MLALTALIVAASMMVLSRPAVGTDPGSSATVIVKYFGRS*
Ga0075433_103081972	3300006852	Populus Rhizosphere	VKRPPDKKMMLAATILLVAASMVLARPAVGTAVGTDRGTPTTLIVKLFGRS*
Ga0075433_106870722	3300006852	Populus Rhizosphere	MRRPPDRKFMLAATALLVAVSMLLARPAVGTDPVPATALIVKFFGRS*
Ga0075425_1004294802	3300006854	Populus Rhizosphere	MRRPPDKKSLLAATILLVAASLLLARPAVGTDPARPQALLVKFFGRS*
Ga0075425_1007134102	3300006854	Populus Rhizosphere	MLAATALLVAASMLLARPAVGTDPVPATALIVKFFGRS*
Ga0075434_1008713382	3300006871	Populus Rhizosphere	MLAATALLVAVSMLLARPAVGTDPVPATALIVKFFGRS*
Ga0075426_100138003	3300006903	Populus Rhizosphere	MMLAATILLVAASMVLARPAVGTDRGSPTLIVKFFGRS*
Ga0075424_1003890193	3300006904	Populus Rhizosphere	VKRPPDKKMMLAATILLVAASMVLARPAVGTAVGGDRGTPTLIVKLFGRS*
Ga0075436_1000083767	3300006914	Populus Rhizosphere	DRKFMLAATALLIAASLVLARPAVGTDPVPTTALIVKLFGRS*
Ga0079219_119929922	3300006954	Agricultural Soil	MRRPPDRKLVLAVTMLVVAACMTLTRSAVGTDRPAAAALMVKLFGRS*
Ga0075435_1000524032	3300007076	Populus Rhizosphere	MMLAATILLVAASMVLARPAVGTAVGTDRGTPTTLIVKLFGRS*
Ga0075435_1004102551	3300007076	Populus Rhizosphere	MVAATILLVAAGMALSRPAVGTDPAAATALIVKVFG
Ga0075435_1017423932	3300007076	Populus Rhizosphere	VKRPPDKKLLLAATILLVAASMALSRPAVGTDPGSPTALIVKVFGRS*
Ga0099791_101811602	3300007255	Vadose Zone Soil	VKRPPDKKLLLAATMLLVAASMALSRPAVGTDRGSPTALIVKLFGRS*
Ga0099791_102394331	3300007255	Vadose Zone Soil	VKRPPDKKLLLAATLLLVAASMALSRPAVGTDRGSPTALLVKLFGRS*
Ga0066710_1000265116	3300009012	Grasslands Soil	VKRPPDKKILLAATILLVAASMALSRPAVGTDRGSPTALIVKFFGRS
Ga0066710_1037421122	3300009012	Grasslands Soil	VKRPPDKKMLLAATILLVAASMALSRPAVGAEPASPTAVIVKLFGRS
Ga0099827_114270502	3300009090	Vadose Zone Soil	MKRPPDKKILLAATILLVAASMVLSRPAVGTDRGSSTALIVKLFGRS*
Ga0066709_1010467292	3300009137	Grasslands Soil	VKRPPDKKLLLAATILLVAASTVLSRPAVGTDRGSPTALIVKFFGRS*
Ga0066709_1043430612	3300009137	Grasslands Soil	VKRPPDKKLVVAATILLVAASMALSRPAVGTDPGSSTTLIVKLFGRP*
Ga0114129_102178373	3300009147	Populus Rhizosphere	MRRPPDKKSLLAATLLLVAASLLLARPAVGTDPARPQALLVKFFGRS*
Ga0114129_102335203	3300009147	Populus Rhizosphere	VKRPPDKKILLAATILLVAASMALSRPAVGTDRGASTALIVKLFGRS*
Ga0099796_105127672	3300010159	Vadose Zone Soil	VKRPPDRKKMLAATILLVAAGMVLSRPAVGTDRGSPTALIVKLFGRS*
Ga0134067_103240022	3300010321	Grasslands Soil	LAATALLVAASFLLARPAVGTDPSRPQALLVKFFGRS*
Ga0134086_103618722	3300010323	Grasslands Soil	MKRPPDKKLLLAATILLVAASMALSRPAVGTDRGSPTALIVKFFGRS*
Ga0134062_107706562	3300010337	Grasslands Soil	MKRPPDRKFMLALTVLVVAASMMMLSRPAVGTDPGASTALIVKFFGRS*
Ga0134126_125585562	3300010396	Terrestrial Soil	VKRPPDKKILLAATILLVAASMVMSRPAVGIDHAPTTLIVKLFGRS*
Ga0134124_122078492	3300010397	Terrestrial Soil	MKRPPDRKLMLALTALIVAASMMMLSRPAVGTDPASSTAVIVKVFGRS*
Ga0134121_100187182	3300010401	Terrestrial Soil	VKRPPDKKMMLAATLLLVAASMVLARPAVGTDRGSPATMIVKLFGRS*
Ga0137393_104182842	3300011271	Vadose Zone Soil	VKRPPDKKLLLAATILLVAASMVLSRPAVGTDRGSPTALIV
Ga0137362_113252162	3300012205	Vadose Zone Soil	KVKRPPDKKLLLAATILLVAASMALSRPAVGTDRGSSTALIVKLFGRS*
Ga0137376_110414872	3300012208	Vadose Zone Soil	MLAATMLLVAAGMILSRPAVGTDRGSPTALIVKLFGRS*
Ga0150985_1014583362	3300012212	Avena Fatua Rhizosphere	MKRPPDRKLMLALTMLVVAASMMMLSRPAVGTDPGASTALIVKFFGRS*
Ga0150985_1220047961	3300012212	Avena Fatua Rhizosphere	VKRPPDKKMMLAATILLVAASMVMSRPAVGTDRGPSSTTLIVKLFG
Ga0150985_1229453242	3300012212	Avena Fatua Rhizosphere	VKRPPDKKFLLAATILLVAASMVMSRPAVGTDRGSSATLIVKLFGRS*
Ga0137366_105965401	3300012354	Vadose Zone Soil	LLAVKRPPDRKFLLAATILLVAAGMALSRPAVGTAASASLIVKFLGRS*
Ga0150984_1009489441	3300012469	Avena Fatua Rhizosphere	KKFMLAATILLVAAGMVLSRPAVGTDRGSSAVLIVKFFGRS*
Ga0150984_1017728061	3300012469	Avena Fatua Rhizosphere	MKRPPDRKFMLAATILIVAAGLMLARPAGGTDQGSHTVSVVKLFGRS*
Ga0150984_1132149285	3300012469	Avena Fatua Rhizosphere	MKRPPDRKFMLALTVLVVAASMMMLSRPAVGTDPASSTAVIVKFFGRS*
Ga0137394_102654892	3300012922	Vadose Zone Soil	VKRPPDKKMMLAATILLVAASMVLARPAVGTDRSSPTTLIVKLFGRS*
Ga0137394_103355082	3300012922	Vadose Zone Soil	VKRPPDKKFLLAATILLVAASMVLSRPAVGTDRGSPTALIVKFFGRS*
Ga0137394_109155092	3300012922	Vadose Zone Soil	MLAATILLVAAGMILSRPAVGTDRGSPTALIVKLFGRS*
Ga0137416_100315663	3300012927	Vadose Zone Soil	VKRPPDKKLLLAATMLLVAANMALSRPAVGTDRGSPTALIVKLFGRS*
Ga0137404_1000046216	3300012929	Vadose Zone Soil	VKRPPDKKLVVAATILLVAASMALSRPAVGTDRGSSTTLIVKLLGRP*
Ga0134076_101241161	3300012976	Grasslands Soil	MKRPPDRKLMLALTALVVAASMMMLSRPAVGTDPASSTAVIVKVF
Ga0134079_102860392	3300014166	Grasslands Soil	VKRPPDKKLVLAATILLVAASMALSRPAVGTDPGSSTTLIVKLFGRP*
Ga0182000_102417482	3300014487	Soil	VKRPPDKKLMVAATILLVAAGMALSRPAVGTDPAAATALIVKVFGRS*
Ga0167657_10018442	3300015079	Glacier Forefield Soil	MMLAATILLVAAGMILSRPAVGTDRSSPTALIVKFFGRS*
Ga0137409_102057693	3300015245	Vadose Zone Soil	VKRPPDKKLLLAATLLLVAASMALSRPAVGTDRGSPTAL
Ga0137409_112221231	3300015245	Vadose Zone Soil	TLLLVAASMALSRPAVGTDRGSPTALLVKLFGRS*
Ga0137409_112224652	3300015245	Vadose Zone Soil	RSSKVKRPPDKKILLAATILLVAASMVLSRPAVGTDRGSSATLIVKLFGRS*
Ga0134112_103342392	3300017656	Grasslands Soil	MKRPPDKKLLLAATILLVAASMVLSRPAVGTDRGSATALIVKFFGRS
Ga0066667_111295341	3300018433	Grasslands Soil	VKRPPDKKILLAATILLVAASMALSRPAVGTDRGSATALIVKLFGRS
Ga0066667_112687122	3300018433	Grasslands Soil	MMLAATILLVAASMVLARPAVGTAVGTDRGSPALIVKLFGRS
Ga0066667_113022322	3300018433	Grasslands Soil	MRRPPDRKFMLAATALLVAASFLLARPAVGTDPSRPQALLVKFFGRS
Ga0066662_105582012	3300018468	Grasslands Soil	MRRPPDKKLLLAATALVVAAGMLLARPAVGTDSGSHSALVVKLFGRS
Ga0066662_108152872	3300018468	Grasslands Soil	MKRPPDKKLLLAATILLVAASMVLSRPAVGTDRGSPTALIVKFFGRS
Ga0066669_101432582	3300018482	Grasslands Soil	MLLAATILIVAAGMLMSKPAVGTDPGASTALIVKVFGRS
Ga0066669_105203842	3300018482	Grasslands Soil	VKRPPDKKLVVAATILLVAASMALSRPAVGTDPGSSTTLIVKLFGRP
Ga0066669_106534042	3300018482	Grasslands Soil	MKRPPDKKLLLAATILLVAASMVLSRPAVGTDRGSATALIVKLFGRS
Ga0137408_10068312	3300019789	Vadose Zone Soil	VKRPPDKKLVVAATILLVAASMALSRPAVGTDRGSSTTLIVKLLGRP
Ga0213880_102530911	3300021953	Exposed Rock	TMKRPPDKKFMLAATILLVAASMVMSRPAVGTDRGSSAALIVKFFGRS
Ga0247671_10545242	3300024284	Soil	VKRPPDKKMMLAATILLVAASMVLARPAVGTAVGSDRGTPTLIVKLFGRS
Ga0247687_10690541	3300024286	Soil	MMLAATLLLVAASMVLARPAVGTDRGSPATMIVKLFGRS
Ga0207684_102981772	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRRPPDRKFMLAATALLIAASLVLARPAVGTDPVPTTALIVKLFGRS
Ga0207662_111597701	3300025918	Switchgrass Rhizosphere	PPDRKFMLAATLLIVAAGLMLARPAVGTDHGTHAVTVVKLFGRS
Ga0207704_118384882	3300025938	Miscanthus Rhizosphere	MLALTALIVAASMMMLSRPAVGTDPASSTAVIVKVFGRS
Ga0207665_109964151	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	HVLGMRRPPDRKLVLAVTILVVAACMTLSRTAVGTDRPAAAALMVKLFGRS
Ga0207708_102215492	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKRPPDRKFMLAATLLIVAAGLMLARPAVGTDHGTHAVTVVKLFGRS
Ga0207674_113402392	3300026116	Corn Rhizosphere	MKRPPARKFMLAATILIVAASLALARPAVGTDHGTHALTVVKLFGRS
Ga0209238_11678542	3300026301	Grasslands Soil	VKRPPDKKMMLAATILLVAASMVLARPAVGTDRGSPTTLIVKLFGRS
Ga0209238_12022372	3300026301	Grasslands Soil	MRRPPDKKLLLAATALLVAAGMLLARPAVGTDSGSHTALVVKLFGRS
Ga0209240_10028446	3300026304	Grasslands Soil	MLAATILLVAAGMILSRPAVGTDRGSPTALIVKLFGRS
Ga0209468_11186191	3300026306	Soil	VKRPPDKKVLLAATILLVAASMLLSRPAVGTDRGSSTALIVKLFG
Ga0209055_10081866	3300026309	Soil	MLAATALLVAASFLLARPAVGTDPSRPQALLVKFFGRS
Ga0209153_10173972	3300026312	Soil	MRRPPDKKLLLAATALLVAAGMLLARPAVGTDSGSHSALVVKLFGRS
Ga0209471_10417023	3300026318	Soil	MKRPPDKKLLLAATMLLVAASMVLSRPAVGTDRGSPTALIVKLFGRS
Ga0209647_12691462	3300026319	Grasslands Soil	VKRPPDKKVLLAATILLVAASMVLSRPAVGTDRGSSATLIVKLFGRS
Ga0209131_10031942	3300026320	Grasslands Soil	MLAATILLVAAGMVLSRPAVGTDRGSPTALIAKFFGRS
Ga0209131_10212782	3300026320	Grasslands Soil	VKRPPDKKILLAATILLVAASMVLSRPAVGTDRGSSATLIVKLFGRS
Ga0209687_11646982	3300026322	Soil	VKRPPDKKLVVAATILLVAASMALSRPAVGTDHASSTTLIVKLFGRP
Ga0209152_102896082	3300026325	Soil	MLAATALLVAASFLLARPAVGTDPSRPQVLLVKFFGRS
Ga0209152_103369112	3300026325	Soil	MRRPPDKKLLLAATALLVAAGMLLARPAVGTDSGSHTALLVKLFGRS
Ga0209802_11402172	3300026328	Soil	VKRPPDKKLLLAATILLVAASMVLSRPAVGTDRGSPTALIVKLFGRS
Ga0209807_10270802	3300026530	Soil	MLLAATILLVAAGMILSRPAVGTDRGSPTALIAKFFGRS
Ga0209156_102020292	3300026547	Soil	VKRPPDKKILLAATILLVAASMVLSRPAVGTDRGSPTALIVKLFGRS
Ga0209474_100786832	3300026550	Soil	MRRPPDRKMLLAATILLVAAGMILSRPAVGTDRGSPTALIAKFFGRS
Ga0209474_101555792	3300026550	Soil	MVLAATILLVAASMVLARPAVGTAVGTDRGSPALIVKLFGRS
Ga0209474_105666551	3300026550	Soil	ATALVVAASMLLARPAVGTDRAPATALIVKLFGRS
Ga0209577_103157912	3300026552	Soil	MMLAATILLVAAGMILSRPAVGTDRGSPTALIVKFFGRS
Ga0209577_104591292	3300026552	Soil	MKRPPDKKLLLAATILLVAASMVLSRPAVGTDRGSPTALIVKLFGRS
Ga0209178_11291792	3300027725	Agricultural Soil	MRRPPDRKLVLAVTILVVAACMTLSRTAVGTDRPAAAALMVKFFGRS
Ga0209073_102538202	3300027765	Agricultural Soil	MRRPPDRKLMLAATALLVAASMLLARPAVGTDPAPSTALIVKFFGRS
Ga0209073_103775092	3300027765	Agricultural Soil	VKRPPDKKMMLAATILLVAASMVLARPAVGTDRGSPTLIVKFFGRS
Ga0209166_100609613	3300027857	Surface Soil	VKRPPDKKVLLAATILLVAASMVLSRPAVGIDHGPSTTLIVKLFGRS
Ga0209590_107973082	3300027882	Vadose Zone Soil	VKRPPDKKLLLAATILLVAASMALSRPAVGTDRGSSTALIVKLFGRS
Ga0137415_100251054	3300028536	Vadose Zone Soil	VKRPPDKKLLLAATLLLVAASMALSRPAVGTDRGSPTALIVKLFGRS
Ga0073997_121733282	3300030997	Soil	MLAATILLVAAGMILSRPAVGTDRHSPTALIVKFLGRS
Ga0307506_101118022	3300031366	Soil	VKRPPDKKVLLAATILLVAASMVMSRPAVGTDRGSSATLIVKLFGRS
Ga0310813_100176154	3300031716	Soil	MLAATILIVAAGLVLARPAIGTDHGTQPVHVVKLFGRS
Ga0307469_100144402	3300031720	Hardwood Forest Soil	MLAATALLVAASMLLARPAVGTDPVPATALIVKFFGRS
Ga0307469_101128503	3300031720	Hardwood Forest Soil	VKRPPDKKLLLAATMLLVAASMLLSRPAVGTDRGSPTALIVKLFGRS
Ga0307469_102962262	3300031720	Hardwood Forest Soil	MLLAATILLVAASMVLSRPAVGTDRGSSTALIVKLFGRS
Ga0307468_1000341932	3300031740	Hardwood Forest Soil	MLAATALLVAVSMLLARPAVGTDPVPATALIVKFFGRS
Ga0307473_102210302	3300031820	Hardwood Forest Soil	VKRPPDKKMMLAATILLVAASMVLARPAVGTDRGSSTALIVKLFGRS
Ga0307416_1026875572	3300032002	Rhizosphere	MGPNKRLMLAATILIVAASLMLARPAVGTDHGAHSVSVVKLFGRS
Ga0307470_101790132	3300032174	Hardwood Forest Soil	VKRPPDKKFLLAATILLVAASMVMSRPAVGTDRGSSATLIVKLFGRS
Ga0310810_101136872	3300033412	Soil	MKRPPDKKIVLAATILLVAASMVRPAVGTDRGSSAVLIVKFFGRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031832

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences