NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F031682

Metagenome / Metatranscriptome Family F031682

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F031682
Family Type Metagenome / Metatranscriptome
Number of Sequences 182
Average Sequence Length 72 residues
Representative Sequence MDSQSHGILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVVPGLWPEEAFPRAPRS
Number of Associated Samples 153
Number of Associated Scaffolds 182

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 85.16 %
% of genes near scaffold ends (potentially truncated) 28.57 %
% of genes from short scaffolds (< 2000 bps) 78.57 %
Associated GOLD sequencing projects 144
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (55.495 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(12.088 % of family members)
Environment Ontology (ENVO) Unclassified
(31.868 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(41.758 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 3.06%    β-sheet: 22.45%    Coil/Unstructured: 74.49%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 182 Family Scaffolds
PF08530PepX_C 9.34
PF00571CBS 7.69
PF01575MaoC_dehydratas 3.85
PF12680SnoaL_2 2.75
PF00072Response_reg 2.20
PF00128Alpha-amylase 2.20
PF13452MaoC_dehydrat_N 1.65
PF02738MoCoBD_1 1.65
PF02515CoA_transf_3 1.10
PF11941DUF3459 1.10
PF02538Hydantoinase_B 1.10
PF00106adh_short 0.55
PF10459Peptidase_S46 0.55
PF13432TPR_16 0.55
PF00581Rhodanese 0.55
PF03129HGTP_anticodon 0.55
PF069833-dmu-9_3-mt 0.55
PF01894UPF0047 0.55
PF13531SBP_bac_11 0.55
PF00202Aminotran_3 0.55
PF05685Uma2 0.55

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 182 Family Scaffolds
COG2936Predicted acyl esteraseGeneral function prediction only [R] 9.34
COG0146N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunitAmino acid transport and metabolism [E] 2.20
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 2.20
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 2.20
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 2.20
COG3280Maltooligosyltrehalose synthaseCarbohydrate transport and metabolism [G] 2.20
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 1.10
COG0124Histidyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.55
COG0423Glycyl-tRNA synthetase, class IITranslation, ribosomal structure and biogenesis [J] 0.55
COG0432Thiamin phosphate synthase YjbQ, UPF0047 familyCoenzyme transport and metabolism [H] 0.55
COG0441Threonyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.55
COG0442Prolyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.55
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 0.55
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 0.55
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 0.55


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms55.49 %
UnclassifiedrootN/A44.51 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090015|GPICI_8903269Not Available1562Open in IMG/M
3300001661|JGI12053J15887_10484974Not Available590Open in IMG/M
3300002886|JGI25612J43240_1016447All Organisms → cellular organisms → Bacteria1093Open in IMG/M
3300003267|soilL1_10170163All Organisms → cellular organisms → Bacteria2842Open in IMG/M
3300003324|soilH2_10193114All Organisms → cellular organisms → Bacteria → Proteobacteria6585Open in IMG/M
3300004463|Ga0063356_100113281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2985Open in IMG/M
3300004463|Ga0063356_100614647All Organisms → cellular organisms → Bacteria1472Open in IMG/M
3300004479|Ga0062595_100141169All Organisms → cellular organisms → Bacteria1380Open in IMG/M
3300004803|Ga0058862_12666822Not Available930Open in IMG/M
3300005290|Ga0065712_10757795Not Available526Open in IMG/M
3300005293|Ga0065715_10355684Not Available943Open in IMG/M
3300005330|Ga0070690_100110828All Organisms → cellular organisms → Bacteria1831Open in IMG/M
3300005333|Ga0070677_10121454Not Available1180Open in IMG/M
3300005338|Ga0068868_100212767Not Available1616Open in IMG/M
3300005341|Ga0070691_10150670Not Available1192Open in IMG/M
3300005347|Ga0070668_100834860Not Available820Open in IMG/M
3300005353|Ga0070669_100033471Not Available3718Open in IMG/M
3300005406|Ga0070703_10061291All Organisms → cellular organisms → Bacteria → Proteobacteria1232Open in IMG/M
3300005434|Ga0070709_10179664All Organisms → cellular organisms → Bacteria → Proteobacteria1485Open in IMG/M
3300005437|Ga0070710_11141088Not Available574Open in IMG/M
3300005440|Ga0070705_100082556All Organisms → cellular organisms → Bacteria1978Open in IMG/M
3300005444|Ga0070694_100845512All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300005445|Ga0070708_100344416All Organisms → cellular organisms → Bacteria1404Open in IMG/M
3300005445|Ga0070708_100689021Not Available962Open in IMG/M
3300005457|Ga0070662_101568756Not Available568Open in IMG/M
3300005467|Ga0070706_100560647All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300005471|Ga0070698_100071391All Organisms → cellular organisms → Bacteria → Proteobacteria3482Open in IMG/M
3300005471|Ga0070698_100831157All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300005518|Ga0070699_100168691All Organisms → cellular organisms → Bacteria1939Open in IMG/M
3300005544|Ga0070686_100393498Not Available1052Open in IMG/M
3300005545|Ga0070695_100443726Not Available993Open in IMG/M
3300005546|Ga0070696_100382091Not Available1098Open in IMG/M
3300005598|Ga0066706_10372328All Organisms → cellular organisms → Bacteria1135Open in IMG/M
3300005874|Ga0075288_1090499Not Available506Open in IMG/M
3300005875|Ga0075293_1024903All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300005879|Ga0075295_1000620All Organisms → cellular organisms → Bacteria2069Open in IMG/M
3300005888|Ga0075289_1072422Not Available562Open in IMG/M
3300005890|Ga0075285_1033859All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300006163|Ga0070715_10173173Not Available1077Open in IMG/M
3300006173|Ga0070716_101385781Not Available571Open in IMG/M
3300006237|Ga0097621_100285704All Organisms → cellular organisms → Bacteria1453Open in IMG/M
3300006237|Ga0097621_102091520Not Available541Open in IMG/M
3300006755|Ga0079222_11291865Not Available664Open in IMG/M
3300006806|Ga0079220_10150802All Organisms → cellular organisms → Bacteria1282Open in IMG/M
3300006845|Ga0075421_100873114Not Available1029Open in IMG/M
3300006847|Ga0075431_100989808Not Available808Open in IMG/M
3300006852|Ga0075433_10795442Not Available826Open in IMG/M
3300006954|Ga0079219_10193289Not Available1144Open in IMG/M
3300007255|Ga0099791_10000614All Organisms → cellular organisms → Bacteria13260Open in IMG/M
3300007255|Ga0099791_10157186All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300009038|Ga0099829_10133090All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1970Open in IMG/M
3300009038|Ga0099829_11077404Not Available666Open in IMG/M
3300009098|Ga0105245_12371312Not Available584Open in IMG/M
3300009143|Ga0099792_10040109All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2227Open in IMG/M
3300009147|Ga0114129_10009645All Organisms → cellular organisms → Bacteria13776Open in IMG/M
3300009147|Ga0114129_10202119All Organisms → cellular organisms → Bacteria2690Open in IMG/M
3300009148|Ga0105243_10052539All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3228Open in IMG/M
3300009804|Ga0105063_1012782All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300009813|Ga0105057_1031815All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300010145|Ga0126321_1185036Not Available510Open in IMG/M
3300010154|Ga0127503_11074498Not Available574Open in IMG/M
3300010359|Ga0126376_12123530Not Available605Open in IMG/M
3300010362|Ga0126377_11393737Not Available774Open in IMG/M
3300010397|Ga0134124_10256243All Organisms → cellular organisms → Bacteria1612Open in IMG/M
3300010400|Ga0134122_10388913All Organisms → cellular organisms → Bacteria1228Open in IMG/M
3300010400|Ga0134122_10658632All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300011120|Ga0150983_11346430Not Available537Open in IMG/M
3300011270|Ga0137391_10149246All Organisms → cellular organisms → Bacteria2036Open in IMG/M
3300011270|Ga0137391_11032929Not Available668Open in IMG/M
3300012171|Ga0137342_1144395Not Available507Open in IMG/M
3300012174|Ga0137338_1020517All Organisms → cellular organisms → Bacteria1294Open in IMG/M
3300012189|Ga0137388_11038763Not Available755Open in IMG/M
3300012202|Ga0137363_10478218Not Available1045Open in IMG/M
3300012208|Ga0137376_10807624Not Available807Open in IMG/M
3300012685|Ga0137397_10015511All Organisms → cellular organisms → Bacteria → Proteobacteria5331Open in IMG/M
3300012929|Ga0137404_11831199Not Available565Open in IMG/M
3300012930|Ga0137407_10470171All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300012931|Ga0153915_10092181All Organisms → cellular organisms → Bacteria3198Open in IMG/M
3300012931|Ga0153915_11245185All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300012958|Ga0164299_10100951Not Available1499Open in IMG/M
3300012988|Ga0164306_11356570Not Available603Open in IMG/M
3300013104|Ga0157370_10283408Not Available1531Open in IMG/M
3300014884|Ga0180104_1116896Not Available769Open in IMG/M
3300014885|Ga0180063_1028645All Organisms → cellular organisms → Bacteria1545Open in IMG/M
3300015259|Ga0180085_1058992All Organisms → cellular organisms → Bacteria1103Open in IMG/M
3300015371|Ga0132258_10450538All Organisms → cellular organisms → Bacteria3208Open in IMG/M
3300015371|Ga0132258_11457951All Organisms → cellular organisms → Bacteria1729Open in IMG/M
3300015373|Ga0132257_103103532Not Available605Open in IMG/M
3300017936|Ga0187821_10026375All Organisms → cellular organisms → Bacteria2040Open in IMG/M
3300018053|Ga0184626_10216388Not Available809Open in IMG/M
3300018063|Ga0184637_10007943All Organisms → cellular organisms → Bacteria6420Open in IMG/M
3300018075|Ga0184632_10009792All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria4016Open in IMG/M
3300018075|Ga0184632_10300920All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium SS-5694Open in IMG/M
3300018422|Ga0190265_11918601Not Available699Open in IMG/M
3300019360|Ga0187894_10039856All Organisms → cellular organisms → Bacteria2888Open in IMG/M
3300019458|Ga0187892_10005348All Organisms → cellular organisms → Bacteria20304Open in IMG/M
3300019458|Ga0187892_10023187All Organisms → cellular organisms → Bacteria → Proteobacteria5668Open in IMG/M
3300019881|Ga0193707_1011620All Organisms → cellular organisms → Bacteria2982Open in IMG/M
3300019881|Ga0193707_1143525Not Available674Open in IMG/M
3300019882|Ga0193713_1008056All Organisms → cellular organisms → Bacteria3240Open in IMG/M
3300019883|Ga0193725_1076145All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300019886|Ga0193727_1056374Not Available1252Open in IMG/M
3300020002|Ga0193730_1195055Not Available500Open in IMG/M
3300020003|Ga0193739_1025433All Organisms → cellular organisms → Bacteria1541Open in IMG/M
3300020021|Ga0193726_1129346All Organisms → cellular organisms → Bacteria1118Open in IMG/M
3300020067|Ga0180109_1319757All Organisms → cellular organisms → Bacteria1424Open in IMG/M
3300020069|Ga0197907_10642914Not Available509Open in IMG/M
3300020581|Ga0210399_10035395All Organisms → cellular organisms → Bacteria → Proteobacteria3998Open in IMG/M
3300021151|Ga0179584_1007320All Organisms → cellular organisms → Bacteria1444Open in IMG/M
3300021307|Ga0179585_1157347Not Available631Open in IMG/M
3300021420|Ga0210394_10923581All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300022467|Ga0224712_10142050Not Available1057Open in IMG/M
3300022534|Ga0224452_1004729All Organisms → cellular organisms → Bacteria → Proteobacteria3300Open in IMG/M
3300022694|Ga0222623_10029447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2078Open in IMG/M
3300025885|Ga0207653_10005814All Organisms → cellular organisms → Bacteria3847Open in IMG/M
3300025885|Ga0207653_10376869Not Available556Open in IMG/M
3300025910|Ga0207684_10004256All Organisms → cellular organisms → Bacteria13577Open in IMG/M
3300025910|Ga0207684_10146010All Organisms → cellular organisms → Bacteria2035Open in IMG/M
3300025910|Ga0207684_10406002All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300025914|Ga0207671_10821497All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300025916|Ga0207663_10741382Not Available780Open in IMG/M
3300025926|Ga0207659_10252162All Organisms → cellular organisms → Bacteria1432Open in IMG/M
3300025930|Ga0207701_10491711All Organisms → cellular organisms → Bacteria → Proteobacteria1051Open in IMG/M
3300025938|Ga0207704_10302513All Organisms → cellular organisms → Bacteria1226Open in IMG/M
3300025944|Ga0207661_10435629All Organisms → cellular organisms → Bacteria1192Open in IMG/M
3300025972|Ga0207668_10514024Not Available1032Open in IMG/M
3300025986|Ga0207658_10422865Not Available1175Open in IMG/M
3300025992|Ga0208775_1019858Not Available533Open in IMG/M
3300026001|Ga0208000_114631Not Available522Open in IMG/M
3300026023|Ga0207677_11335017Not Available659Open in IMG/M
3300026285|Ga0209438_1001009All Organisms → cellular organisms → Bacteria9102Open in IMG/M
3300026285|Ga0209438_1012995All Organisms → cellular organisms → Bacteria → Proteobacteria2786Open in IMG/M
3300026285|Ga0209438_1048842All Organisms → cellular organisms → Bacteria1396Open in IMG/M
3300026285|Ga0209438_1141096All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium639Open in IMG/M
3300026340|Ga0257162_1007423All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1258Open in IMG/M
3300026358|Ga0257166_1023353Not Available825Open in IMG/M
3300026359|Ga0257163_1016197All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300026360|Ga0257173_1011048All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300026480|Ga0257177_1002354All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2022Open in IMG/M
3300026482|Ga0257172_1111134Not Available504Open in IMG/M
3300026497|Ga0257164_1075147Not Available566Open in IMG/M
3300026499|Ga0257181_1017709All Organisms → cellular organisms → Bacteria1031Open in IMG/M
3300026499|Ga0257181_1074253Not Available585Open in IMG/M
3300026515|Ga0257158_1013100All Organisms → cellular organisms → Bacteria1309Open in IMG/M
3300026551|Ga0209648_10649419Not Available577Open in IMG/M
3300027169|Ga0209897_1035387All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300027583|Ga0209527_1071264Not Available782Open in IMG/M
3300027645|Ga0209117_1024430All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae1927Open in IMG/M
3300027765|Ga0209073_10520805Not Available504Open in IMG/M
3300027862|Ga0209701_10041059All Organisms → cellular organisms → Bacteria2989Open in IMG/M
3300027862|Ga0209701_10385393All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300027909|Ga0209382_10887314Not Available940Open in IMG/M
3300028047|Ga0209526_10416828Not Available889Open in IMG/M
3300028587|Ga0247828_10592815Not Available674Open in IMG/M
3300028596|Ga0247821_10942167Not Available576Open in IMG/M
3300028792|Ga0307504_10020561All Organisms → cellular organisms → Bacteria1635Open in IMG/M
3300028792|Ga0307504_10051045All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1181Open in IMG/M
3300028792|Ga0307504_10305066Not Available600Open in IMG/M
3300028803|Ga0307281_10002863All Organisms → cellular organisms → Bacteria4785Open in IMG/M
3300028807|Ga0307305_10330014Not Available693Open in IMG/M
3300030336|Ga0247826_11289740All Organisms → cellular organisms → Bacteria588Open in IMG/M
(restricted) 3300031197|Ga0255310_10017213All Organisms → cellular organisms → Bacteria1856Open in IMG/M
(restricted) 3300031248|Ga0255312_1011000All Organisms → cellular organisms → Bacteria → Proteobacteria2156Open in IMG/M
3300031547|Ga0310887_11008909Not Available531Open in IMG/M
3300031716|Ga0310813_11619444Not Available605Open in IMG/M
3300031720|Ga0307469_11570516Not Available631Open in IMG/M
3300031820|Ga0307473_10016515All Organisms → cellular organisms → Bacteria2880Open in IMG/M
3300031820|Ga0307473_11343332Not Available536Open in IMG/M
3300031858|Ga0310892_10879452All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300031908|Ga0310900_10318965Not Available1150Open in IMG/M
3300031908|Ga0310900_11245477Not Available620Open in IMG/M
3300031949|Ga0214473_10315606All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1782Open in IMG/M
3300032174|Ga0307470_10137047All Organisms → cellular organisms → Bacteria1474Open in IMG/M
3300032174|Ga0307470_10987814Not Available669Open in IMG/M
3300032205|Ga0307472_100947993Not Available801Open in IMG/M
3300033412|Ga0310810_10007291All Organisms → cellular organisms → Bacteria12599Open in IMG/M
3300033432|Ga0326729_1010428All Organisms → cellular organisms → Bacteria1630Open in IMG/M
3300033433|Ga0326726_10034126All Organisms → cellular organisms → Bacteria → Proteobacteria4434Open in IMG/M
3300033433|Ga0326726_10978441All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300033513|Ga0316628_100095515All Organisms → cellular organisms → Bacteria → Proteobacteria3312Open in IMG/M
3300033513|Ga0316628_101091514All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300034176|Ga0364931_0331438Not Available507Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere12.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.89%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.34%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.85%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil3.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.30%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.30%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.30%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.75%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.75%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.20%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.20%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.20%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.65%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.65%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.65%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.65%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.10%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.10%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.10%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.10%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.10%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.10%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.10%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.10%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.10%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze1.10%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.10%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.10%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.10%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.10%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.10%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.55%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.55%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.55%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.55%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.55%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.55%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.55%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.55%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.55%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.55%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090015Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005874Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404EnvironmentalOpen in IMG/M
3300005875Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101EnvironmentalOpen in IMG/M
3300005879Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301EnvironmentalOpen in IMG/M
3300005888Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103EnvironmentalOpen in IMG/M
3300005890Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009804Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40EnvironmentalOpen in IMG/M
3300009813Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20EnvironmentalOpen in IMG/M
3300010145Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012171Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2EnvironmentalOpen in IMG/M
3300012174Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300014884Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1DaEnvironmentalOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300015259Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020067Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021151Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021307Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025992Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104 (SPAdes)EnvironmentalOpen in IMG/M
3300026001Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104 (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026340Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-AEnvironmentalOpen in IMG/M
3300026358Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-BEnvironmentalOpen in IMG/M
3300026359Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-AEnvironmentalOpen in IMG/M
3300026360Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-BEnvironmentalOpen in IMG/M
3300026480Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-BEnvironmentalOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300026497Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-BEnvironmentalOpen in IMG/M
3300026499Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-BEnvironmentalOpen in IMG/M
3300026515Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027169Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033432Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fractionEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GPICI_030317902088090015SoilMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHPR
JGI12053J15887_1048497413300001661Forest SoilMEPRDDRVHRVSGPNSIEGPCPRCSRTLKAIHTVSQYGRPSVALLECAYCRYTCQTVVPGLWPDEAFPRAQSSAR*
JGI25612J43240_101644713300002886Grasslands SoilMDPREDRFPDSTSVEGPCPRCGRLLKAIHTVSQYRRPSVALLQCARCRYTCQTVVPGLWPDEAFPRTPSPGR*
soilL1_1017016343300003267Sugarcane Root And Bulk SoilMAVASLFVAGEITAMDTRTRDILGSSSLEQPCPRCGRLLKAMHTISQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPHDPGPSSSDHSYHSQPR*
soilH2_1019311443300003324Sugarcane Root And Bulk SoilMDTRTRDILGSSSLEQPCPRCGRLLKAMHTISQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPHDPGPSSSDHSYHSQPR*
Ga0063356_10011328133300004463Arabidopsis Thaliana RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHPR*
Ga0063356_10061464733300004463Arabidopsis Thaliana RhizosphereMETDRFHVLESTAVEGPCPRCSEPLRAVHTVSRYGRPTVALLECARCRYTCQTVVPGMWPDEAFPRTASSAR*
Ga0062595_10014116913300004479SoilMATQTSGVLGSKSLEGPCPRCGRQLQAIHTVSQYGRPSVALLECARCRYVCQTVITGLWPEEAFPRTPHHPSPAR*
Ga0058862_1266682213300004803Host-AssociatedIAMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHPR*
Ga0065712_1075779513300005290Miscanthus RhizospherePRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHPR*
Ga0065715_1035568423300005293Miscanthus RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRDPGSGTPDHSYPSQPR*
Ga0070690_10011082813300005330Switchgrass RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQS
Ga0070677_1012145413300005333Miscanthus RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTLVPGLWPEEAFPRDPGSGTPDHSYQSHPR*
Ga0068868_10021276723300005338Miscanthus RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRDPGSGTPDHSYQSHPR*
Ga0070691_1015067023300005341Corn, Switchgrass And Miscanthus RhizosphereMDSQSHGILGASSVEGPCPRCNRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRATRS*
Ga0070668_10083486013300005347Switchgrass RhizosphereGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHPR*
Ga0070669_10003347113300005353Switchgrass RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYKSHPR*
Ga0070703_1006129143300005406Corn, Switchgrass And Miscanthus RhizosphereMDLQAHGLLGASSLEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVIPGLWPEQAFPHTPASNAR*
Ga0070709_1017966413300005434Corn, Switchgrass And Miscanthus RhizosphereMAIGILGSNSLEGPCPRCGRQLQAIHTVSQYGRPSVALLECPRCRYVCQTVVTGLWPEEAFPRTPHDPSPAR*
Ga0070710_1114108823300005437Corn, Switchgrass And Miscanthus RhizosphereMAIGILGSNSLEGPCPRCGRQLQAIHTVSQYGRPSVALLECPRCRYVCQTVVTGLWPEE
Ga0070705_10008255623300005440Corn, Switchgrass And Miscanthus RhizosphereMDPREHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFARTASR*
Ga0070694_10084551223300005444Corn, Switchgrass And Miscanthus RhizosphereMDLQAHGLLGASSLEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVIPGLWPEQ
Ga0070708_10034441633300005445Corn, Switchgrass And Miscanthus RhizosphereMDPREHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFSRTAIR*
Ga0070708_10068902123300005445Corn, Switchgrass And Miscanthus RhizosphereMATQTIGILGSNSLEGPCPRCGRQLQAIHTVSQYGRPSVALLECPRCRYVCQTVVTGLWPEEAFPRTPHDPSPAR*
Ga0070662_10156875623300005457Corn RhizosphereMNTTQDRLPESTSLSELCPRCGRSLKALHTVSQYGRPSVALLECARCRYTCQTVVPALWPDQASHEIDHQRGDAMV
Ga0070706_10056064713300005467Corn, Switchgrass And Miscanthus RhizosphereMDPREHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFARTA
Ga0070698_10007139113300005471Corn, Switchgrass And Miscanthus RhizosphereMDPREHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAF
Ga0070698_10083115723300005471Corn, Switchgrass And Miscanthus RhizosphereMEPRDDRVYRFPGPNSIEGPCPRCSRTLKAIHTISQYGRPSVALLECAHCRYTCQTVVPGLWPDEAFPRAQASAR*
Ga0070699_10016869133300005518Corn, Switchgrass And Miscanthus RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLEYARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHPR*
Ga0070686_10039349813300005544Switchgrass RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPCAPGSGTPDHSYQSHPR*
Ga0070695_10044372623300005545Corn, Switchgrass And Miscanthus RhizosphereMDPQEHGLLGASSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVIPGLWPEQAFPHTPVNNAR*
Ga0070696_10038209113300005546Corn, Switchgrass And Miscanthus RhizosphereLSERGHTMETDRFHVLESTAVEGPCPRCSEPLRAVHTVSRYGRPTVALLECARCRYTCQTVVPGMWPDEAFPRTASSAR*
Ga0066706_1037232813300005598SoilMDPRDHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFPRTASR*
Ga0075288_109049923300005874Rice Paddy SoilMDSQSHGILGASSVEGPCPRCNRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRPPAPEPHSNAR*
Ga0075293_102490333300005875Rice Paddy SoilGAVMDSESHGILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRAPRS*
Ga0075295_100062043300005879Rice Paddy SoilMDSESHGILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRATRS*
Ga0075289_107242213300005888Rice Paddy SoilGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRAPRS*
Ga0075285_103385933300005890Rice Paddy SoilAVMDSESHGILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRATRS*
Ga0070715_1017317313300006163Corn, Switchgrass And Miscanthus RhizosphereMAIGILGSNSLEGPCPRCDRQLQTIHTVSQYGRPSVALLECPRCRYVCQTVVTGLWPEEAFPRTPHSIPAR*
Ga0070716_10138578113300006173Corn, Switchgrass And Miscanthus RhizosphereMAIGILGSNSLEGPCPRCGRQLQAIHTVSQYGRPSVALLECPRCRYVCQTVVTGLWPEEAFP
Ga0097621_10028570433300006237Miscanthus RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWP
Ga0097621_10209152023300006237Miscanthus RhizosphereMDPQEHGLLGASSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVVPGLWPEQAFPHAPGH*
Ga0079222_1129186523300006755Agricultural SoilMDTRTRDILGSSSLEQPCPRCGRLLKAMHTVSQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPHDPGPSPSDHSYHSQSR*
Ga0079220_1015080233300006806Agricultural SoilMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSVTPDHSYQSHPR*
Ga0075421_10087311413300006845Populus RhizosphereKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRDPGSGTPDHSYPSQPR*
Ga0075431_10098980833300006847Populus RhizospherePRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRDPGSGTPDHSYPSQPR*
Ga0075433_1079544223300006852Populus RhizosphereMATQTSGILGSKSLEGPCPRCGRQLQAIHTVSQYGRPSVALLECPRCRYVCQTVVTGLWPEEAFPRTPHSSPAR*
Ga0079219_1019328933300006954Agricultural SoilMDSQSHGILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVVPGLWPEEAFPRAPAPDHSNTR*
Ga0099791_10000614113300007255Vadose Zone SoilMDPREHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFARTAGR*
Ga0099791_1015718633300007255Vadose Zone SoilMDPRDHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAF
Ga0099829_1013309043300009038Vadose Zone SoilMEGNGNGNGNRILESSSLEGLCPRCSEPLRAIHTVSRYGRPSVALLECARCRYTCQTVVPGLWPDEAFPRTQPSAR*
Ga0099829_1107740413300009038Vadose Zone SoilMDPREHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFAR
Ga0105245_1237131223300009098Miscanthus RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPG
Ga0099792_1004010963300009143Vadose Zone SoilMDPREHGLLGEASIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFPRTASR*
Ga0114129_10009645133300009147Populus RhizosphereMEPRDRVYRVPGPNSIEGPCPRCSRVLKAIHTISQYGRPSVALLECAHCRYTCQTVVPGLWPDEAFPRAQASAR*
Ga0114129_1020211943300009147Populus RhizosphereMATQTIGILGSNSLEGPCPRCDRQLQAIHTVNQYGRPSVALLECPRCRYVCQTVVTGLWPEEAFPRTPHDPSPAR*
Ga0105243_1005253933300009148Miscanthus RhizosphereMNTTQDRLPESTSLSELCPRCGRSLKALHTVSQYGRPSVALLECARCRYTCQTVVPALWPDQAFPRNRPSAR*
Ga0105063_101278223300009804Groundwater SandMESHAHSVLDSKSVEGPCPRCGRLLRSIHTVSQYGRPSVPLLECTRCRYTCQTVISGLWPEEAFPRASRS*
Ga0105057_103181523300009813Groundwater SandMESHAHSVLDSKSVEGPCPRCGRLLRSIHTVSQYGRPSVPLLECTRCRYTCQTVISGLWPEEAFPRAARP*
Ga0126321_118503613300010145SoilTAMDTKTRDILGSSSLEQPCPRCGRQLKAIHTVSQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRVSGQAQSDHSYHVQPR*
Ga0127503_1107449823300010154SoilAMDLQEHGLLGARSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVVPGLWPEQAFPRAAAR*
Ga0126376_1212353013300010359Tropical Forest SoilMDTKTRDILGSSSLEQPCPRCGRQLKAIHTVSQYGHPSVALLECARCRYVCQTVVPGLWPEEAIPRVSESEASPAHSYPS*
Ga0126377_1139373713300010362Tropical Forest SoilMDTKTRDILGSSSLEQPCPRCGRQLKAIHTVSQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRVSESEASPAHSYPS*
Ga0134124_1025624343300010397Terrestrial SoilMNTTQDRLPESSSLSELCPRCGRSLKALHTVSQYGRPSVALLECARCRYTCQTVVPALWPDQAFPRNRPSAR*
Ga0134122_1038891313300010400Terrestrial SoilMDPQEHGLLGVSSIEGPCPRCGRLLKAVHTVTQYGHPSVALLQCPRCRYTCQTVVPGLWPEQAFARTASR*
Ga0134122_1065863223300010400Terrestrial SoilMEPNGNGHHILESSSMDGPCPRCGESLRSIHTVSRWGRPTVALLECARCRYTCQTVVPGMWPDEAFPRTLSVAAR*
Ga0150983_1134643013300011120Forest SoilMATQTSGILGSKSLEGPCPRCGRQLQAIHTVSQYGRPSVALLECPRCRYVCQTVVTGLWPEEAFPRTPHSIPAR*
Ga0137391_1014924643300011270Vadose Zone SoilMDPRDHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFARTAGR*
Ga0137391_1103292923300011270Vadose Zone SoilMDPREHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFPRTASR*
Ga0137342_114439513300012171SoilMEPNGNRILESSSPEGPCPRCSEPLRAIHTVSRYGRPSVALLECARCRYTCQTVVPGLWPDEAFPRTHS*
Ga0137338_102051713300012174SoilMEPNGNRILESSSLEGSCPRCSEPLRAIHTVSRYGRPTVALLECARCRYTCQTVVPGLWPDEAFPRTHS*
Ga0137388_1103876313300012189Vadose Zone SoilMEPHVRRSLGLGSLEERCPRCGRLLRAIHTGSQYGRQTVALLECTCCRYTCQTVITG
Ga0137363_1047821823300012202Vadose Zone SoilMDPREHGLLGEASIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFARTASR*
Ga0137376_1080762413300012208Vadose Zone SoilMDLQEHGILGASSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVVPGLWPEQAFPRTAAR*
Ga0137397_1001551123300012685Vadose Zone SoilMEPRNDRVSGPSSIEGPCPRCSRALKAIHTISQYGRPSVALLECAYCRYTCQTVVPGLWPDEAFPRAHSSAR*
Ga0137404_1183119913300012929Vadose Zone SoilMDPREHGLLGEGSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFARTASR*
Ga0137407_1047017123300012930Vadose Zone SoilMEPRDDRVYRFPGPNSIEVPCPRCSRTLKAIHTISQYGRPSVALLECAHCRYTCQTVVPGLWPDEAFPRAQASAR*
Ga0153915_1009218173300012931Freshwater WetlandsMDSQSHGILGASSVQGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEDAFPRAPRS*
Ga0153915_1124518513300012931Freshwater WetlandsHGLLGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRAPRS*
Ga0164299_1010095133300012958SoilSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRDPGSGTPDHSYPSQPR*
Ga0164306_1135657023300012988SoilMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRDPGSGTPDHSY
Ga0157370_1028340813300013104Corn RhizosphereTKTHDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHPR*
Ga0180104_111689623300014884SoilMEPNGNRILESSSLEGSCPRCSEPLRAIHTVSRYGRPSVALLECARCRYTCQTVVPGLWPDEAFPRTHS*
Ga0180063_102864523300014885SoilMEPNGNRILESSSLEGSCPRCSEPLRAIHTVSRYGRPTVALLECARCRYTCQTVVPGLWPDEAFPRTQPSAR*
Ga0180085_105899223300015259SoilMEPNGNRILESSSFEGSCPRCSEPLRAIHTVSRYGRPSVALLECARCRYTCQTVVPGLWPDEAFPRTQPSAR*
Ga0132258_1045053843300015371Arabidopsis RhizosphereMDSQSHGILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVVPGLWPEEAFPRAPRS*
Ga0132258_1145795123300015371Arabidopsis RhizosphereMDSQSHGILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRAPAPDHSNTR*
Ga0132257_10310353213300015373Arabidopsis RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRDPGSGT
Ga0187821_1002637543300017936Freshwater SedimentMDSQSHGILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVVPGLWPEEAFPRAPAPDHSNTR
Ga0184626_1021638823300018053Groundwater SedimentMEPNGNRILESSFLEGPCPRCSEPLRAIHTVSRYGRPSVALLECARCRYTCQTVIPGLWPDEAFPRTQPSAR
Ga0184637_1000794333300018063Groundwater SedimentMESHAHSVLDSKSVEGPCPRCGRLLRSIHTVSQYGRPSVPLLECTRCRYTCQTVISGLWPEEAFPRAARP
Ga0184632_1000979253300018075Groundwater SedimentMEPHVEGPCPRCGRLLKAIHTVSQYGRPSVALLECARCRYTCQTAIPGLWPDEAFPRTRSSAR
Ga0184632_1030092023300018075Groundwater SedimentMEGNGNGNGHRNLESTSLEGACPRCNEPLRAIHTVSRYGRPTVALLECARCRYTCQTVIPGLWPDEAFPRTQPSAR
Ga0190265_1191860123300018422SoilMEPRDDRFRGSSSVEGPCPRCNRPLKAMHTISQYGRPSVALLECAHCRYTCQTVIHGFWPDEAFPRTHSSTR
Ga0187894_1003985633300019360Microbial Mat On RocksMEPSGDRVLESSSMETPCPRCDRPLRALHTVSRYGRPTVALLECARCRYTCQAVVSGLWPDEAFPRTQASGR
Ga0187892_1000534863300019458Bio-OozeMESHAHSVLDAKSIEGPCPRCGRLLRSIHTVSQYGRPSVALLECARCRYTCQAVISGLWPEEAFPRAARP
Ga0187892_1002318773300019458Bio-OozeMEPNGDRVLESSSMETPCPRCDRPLRALHTVSRYGRPTVALLECARCRYTCQAVVSGLWPDEAFPRTQASGR
Ga0193707_101162043300019881SoilMEPRDDRVYRFSGPNSIEGPCPRCSRALKAIHTISQYGRPSVALLECAYCRYTCQTVVPGLWPDEAFPRAQSTAR
Ga0193707_114352523300019881SoilMDPRDHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFARTASR
Ga0193713_100805653300019882SoilMEPRDDRVYRFSGPNSIEGPCPRCSRALRAIHTISQYGRPSVALLECAHCRYTCQTVVPGLWPDEAFPRAQSSAR
Ga0193725_107614523300019883SoilMEGNGNGNRILESTSLEGACPRCNEPLRAIHTVSRYGRPSVALLECARCRYTCQTVVPGLWPDEAFPRTQPSAR
Ga0193727_105637443300019886SoilMEPRADRVWGPSSIEGPCPRCSRTLKAIHTISQYGRPSVALLECAHCRYTCQTVVPGLWPDEAFPRAQSSAR
Ga0193730_119505513300020002SoilMDPRDHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFARTA
Ga0193739_102543333300020003SoilMEPNGNGHRTLESSYLEGPCPRCSEPLRAIHTVSRYGRPSVALLECARCRYTCQTVIPGLWPDEAFPRTQPSAR
Ga0193726_112934633300020021SoilMDPQEHGLLGASSLEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVVPGLWPEQAFPRASGH
Ga0180109_131975733300020067Groundwater SedimentMEPNGNRILESSSFEGSCPRCSEPLRAIHTVSRYGRPTVALLECARCRYTCQTVVPGLWPDEAFPRTHS
Ga0197907_1064291413300020069Corn, Switchgrass And Miscanthus RhizosphereIAMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHPR
Ga0210399_1003539543300020581SoilMEPNSHSLLGPSSVEGPCPRCGRLLRAIHTVTQYDRPSVALLECARCRYTCQTVIPGLWPDEAFPRAQSRAR
Ga0179584_100732023300021151Vadose Zone SoilMDPREHGLLGEASIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFARTASR
Ga0179585_115734713300021307Vadose Zone SoilMDPRDHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFPRTASR
Ga0210394_1092358123300021420SoilMEPNSHSLLGPSSIEGPCPRCGRLLRAIHTVTQYGRPSVALLECGRCRYTCQTVIP
Ga0224712_1014205033300022467Corn, Switchgrass And Miscanthus RhizosphereGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHP
Ga0224452_100472913300022534Groundwater SedimentMEPHVEGPCPRCGRLLKAIHTVSQYGRPSVALLECARCRYTCQTVIPGLWPDEAFPRTQPSAR
Ga0222623_1002944743300022694Groundwater SedimentMEPHVEGPCPRCGRLLKAIHTVSQYGRPSVALLECARCRYTCQTVIPGLWPDEAFPRTQSSAR
Ga0207653_1000581473300025885Corn, Switchgrass And Miscanthus RhizosphereMDLQAHGLLGASSLEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVIPGLWPEQAFPHTPASNAR
Ga0207653_1037686913300025885Corn, Switchgrass And Miscanthus RhizosphereMNTTQDRLPESTSLSELCPRCGRSLKALHTVSQYGRPSVALLECARCRYTCQTVVPALWPDQAFPRNRPSAR
Ga0207684_10004256103300025910Corn, Switchgrass And Miscanthus RhizosphereMESQAYSVLGSSSVEGPCPRCRRLLQAIHTVSQYGRPSVALLECPRCRYTCQAVISGLWPEEAFPRAARP
Ga0207684_1014601013300025910Corn, Switchgrass And Miscanthus RhizosphereMDPREHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQA
Ga0207684_1040600223300025910Corn, Switchgrass And Miscanthus RhizosphereMATQTIGILGSNSLEGPCPRCGRQLQAIHTVSQYGRPSVALLECPRCRYVCQTVVTGLWPEEAFPRTPHDPSPAR
Ga0207671_1082149733300025914Corn RhizosphereLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHPR
Ga0207663_1074138223300025916Corn, Switchgrass And Miscanthus RhizosphereMAIGILGSNSLEGPCPRCGRQLQAIHTVSQYGRPSVALLECPRCRYVCQTVVTGLWPEEAFPRTPHSIPAR
Ga0207659_1025216233300025926Miscanthus RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPR
Ga0207701_1049171123300025930Corn, Switchgrass And Miscanthus RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLEGARCRYVCQTVVPGLWPEEAFPRDPGSGTPDHSYPSQPR
Ga0207704_1030251313300025938Miscanthus RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAF
Ga0207661_1043562933300025944Corn RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFP
Ga0207668_1051402433300025972Switchgrass RhizosphereLGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHPR
Ga0207658_1042286533300025986Switchgrass RhizosphereCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHPR
Ga0208775_101985813300025992Rice Paddy SoilILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRATRS
Ga0208000_11463113300026001Rice Paddy SoilGAVMDSQSHGILGASSVEGPCPRCNRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRATRS
Ga0207677_1133501723300026023Miscanthus RhizosphereMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRDPGSGTPDHSYQSHPR
Ga0209438_100100983300026285Grasslands SoilMDPREDRFPDSTSVEGPCPRCGRLLKAIHTVSQYRRPSVALLQCARCRYTCQTVVPGLWPDEAFPRTPSPGR
Ga0209438_101299523300026285Grasslands SoilMEPRNDRGSGPSSIEGPCPRCSRALKAIHTISQYGRPSVALLECAYCRYTCQTVVPGLWPDEAFPRAQSSAR
Ga0209438_104884213300026285Grasslands SoilMDPREHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLW
Ga0209438_114109613300026285Grasslands SoilMEPQDHGLLGASSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVIPGLWPEQAFPYTPASNVR
Ga0257162_100742313300026340SoilMDPREHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFARTAGR
Ga0257166_102335323300026358SoilMEGNGNGNRILESTSLEGACPRCSEPLRAIHTVSRYGRPSVALLECARCRYTCQTVVPGLWPDEAFPRTQPSAR
Ga0257163_101619733300026359SoilMDPQEHGLLGASSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVVPGLWPEQAFPRVAA
Ga0257173_101104833300026360SoilMEGNGNGNGNRILESSSLEGLCPRCSEPLRAIHTVSRYGRPSVALLECARCRYTCQTVVPGLWPDEAFPRTQPSAR
Ga0257177_100235453300026480SoilMEPNGNRTLESSFLEGPCPRCSEPLRAIHTVSWYGRPSVALLECARCRYTCQTVVPGLWPDEAFPRTQPSAR
Ga0257172_111113423300026482SoilMDPREHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFSRTASR
Ga0257164_107514723300026497SoilMEGNGNGNGNGNRILESSSLEGRCPRCSEPLRAIHTVSRYGRPSVALLECARCRYTCQTVVPGLWPDEAFPRTQPSAR
Ga0257181_101770923300026499SoilMEPNGNRTLESSFLEGPCPRCSEPLRAIHTVSRYGRPSVALLECARCRYTCQTVVPGLWPDEAFPRTQPSAR
Ga0257181_107425313300026499SoilMDPRDHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFARTAGR
Ga0257158_101310033300026515SoilMDPQEHGLLGASSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVVPGLWPEQAFPRVAAR
Ga0209648_1064941923300026551Grasslands SoilMDPRDHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWP
Ga0209897_103538713300027169Groundwater SandMESHAHSVLDSKSVEGPCPRCGRLLRSIHTVSQYGRPSVPLLECTRCRYTCQTVISGLWPEEAFPRASRS
Ga0209527_107126423300027583Forest SoilMDPQEHGILGASSLEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVVPGLWPEQAFPRTAAR
Ga0209117_102443023300027645Forest SoilMDPQEHGLLGASSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVVPGLWPEQAFPRTAVR
Ga0209073_1052080513300027765Agricultural SoilMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGAGTPDHSYQSHPR
Ga0209701_1004105943300027862Vadose Zone SoilMEGNGNGNGNRILESSSLEGLCPRCSEPLRAIHTVSRYGRPSVALLECARCRYTCQTVIPGLWPDEAFPRTQPSAR
Ga0209701_1038539313300027862Vadose Zone SoilMDPREHGLLGESSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFPRTASR
Ga0209382_1088731413300027909Populus RhizosphereTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRDPGSGTPDHSYPSQPR
Ga0209526_1041682833300028047Forest SoilMATTQTSGILGSKSLEGPCPRCGRQLQAIHTVSQYGRPSVALLECPRCRYVCQTVVTGLWPEEAFPRTPHDSSPAR
Ga0247828_1059281523300028587SoilMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRDPGSGTPDHSYPSQPR
Ga0247821_1094216713300028596SoilAGEAIAMDTKTRDILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHPR
Ga0307504_1002056123300028792SoilMDSQSHGILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPHAPRS
Ga0307504_1005104523300028792SoilMDPQEHGLLGASSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVVPGLWPEQAFPSTAAR
Ga0307504_1030506623300028792SoilMERVLGSSSVEGPCPRCGRLLQAIHTVSQYGQPSVALLECPRCRYTCQAVISGLWPEEAFPRAPRP
Ga0307281_1000286363300028803SoilMEPNGNRILESSSVEGPCPRCSEPLRAIHTVSRYGRPTVALLECARCRYTCQSVVPRLWPDEAFPRTQSSAR
Ga0307305_1033001423300028807SoilMDPRDHGLLGESSLEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFARTASR
Ga0247826_1128974023300030336SoilMNTTQDRLPESTSLSELCPRCGRSLKALHTVSQYGRPSVALLECARCRYTCQTVVPALWPDQAFP
(restricted) Ga0255310_1001721333300031197Sandy SoilMDSQSHGILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVVPGLWPEEAFPRAPRS
(restricted) Ga0255312_101100043300031248Sandy SoilMEPREDHEPASSPIEGSCPRCGRPLKAIHTVSQHGRPSVALLECVRCRYTCQTVVPGLWPDEAFPRAPSSAR
Ga0310887_1100890923300031547SoilMDSQSHGILGASSVEGPCPRCNRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGL
Ga0310813_1161944413300031716SoilMDSQSHGILGASSLEGPCPRCGRLLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFRRVPAPDHSNTR
Ga0307469_1157051613300031720Hardwood Forest SoilMEPNGNGHHILESSSMDGPCPRCGESLRSIHTVSRWGRPTVALLECARCRYTCQTVVPGMWPDEAFPRTLSVAAR
Ga0307473_1001651533300031820Hardwood Forest SoilMDLQAHGLLGASSLEGPCPRCGRLLKAIHTVTQYGHPSVALLQCPRCRYTCQTVIPGLWPEQAFLHTPASNAR
Ga0307473_1134333223300031820Hardwood Forest SoilMATQTSGILGSKSLEGPCPRCGRRLQAIHTVSQYGRPSVALLECARCRYVCQTVVTGLWPEEAFPRTPHHPSSAR
Ga0310892_1087945233300031858SoilILGSSSLEQPCPRCGRLLKAIHTVTQYGHPSVALLECARCRYVCQTVVPGLWPEEAFPRAPGSGTPDHSYQSHPR
Ga0310900_1031896533300031908SoilMDSQSHGILGASSVEGPCPRCNRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRATRS
Ga0310900_1124547713300031908SoilMDPQEHGLLGVSSIEGPCPRCGRLLKAVHTVTQYGHPSVALLQCPRCRYTCQTVVPGLWPEQAFPHAPGH
Ga0214473_1031560643300031949SoilMQPGGERILESSSVEGPCPRCDRPLRAIHTVSRYGRPTVALLECARCRYTCQTVVPGLWPDEAFPRTPSSGR
Ga0307470_1013704733300032174Hardwood Forest SoilMDRRESRAMGASSIEGPCPRCSRVLKAIHTVTQYGHPSVALLECPHCRYTCQTVVPGLWPDEAFPRSSSPGR
Ga0307470_1098781413300032174Hardwood Forest SoilMDPQEHGLLGASSIEGPCPRCGRLLKAIHTVTQYGHPSVALLQCARCRYTCQTVVPGLWPEQAFARTASR
Ga0307472_10094799313300032205Hardwood Forest SoilMATQTSGILGSKSLEGPCPRCGRQLQAIHTVSQYGRPSVALLECARCRYVCQTVVTGLWPEEAFPRTPHHPSSAR
Ga0310810_10007291163300033412SoilMDSQSHGILGASSLEGPCPRCGRLLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFRRAPAPDHSNTR
Ga0326729_101042843300033432Peat SoilMDSQSHGILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRAPRS
Ga0326726_1003412633300033433Peat SoilMDPQSHGILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRAPRS
Ga0326726_1097844123300033433Peat SoilMDSQSHGILGASSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWP
Ga0316628_10009551563300033513SoilMDPESHGLLGSSSVEGPCPRCGRPLKAIHTVSQYGRPSVALLQCARCRYICQTVVPGLWPEEAFPRAPLLNHSNAR
Ga0316628_10109151433300033513SoilMDSQSHGILGASSVEGPCPRCSRPLKAIHTVSQYGRPSVALLQCARCRYICQTVIPGLWPEEAFPRAPRS
Ga0364931_0331438_187_4113300034176SedimentMEGNGNGNRILESTSLEGACPRCNEPLRAIHTVSRYGRPTVALLECARCRYTCQTVVPGLWPDEAFPRTQPSAR


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