Metagenome / Metatranscriptome Family F031610

Basic Information
Family ID	F031610
Family Type	Metagenome / Metatranscriptome
Number of Sequences	182
Average Sequence Length	40 residues
Representative Sequence	GYPGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD
Number of Associated Samples	162
Number of Associated Scaffolds	182

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.55 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	155
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (99.451 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.385 % of family members)
Environment Ontology (ENVO)	Unclassified (25.275 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.901 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 56.41% β-sheet: 0.00% Coil/Unstructured: 43.59%
Feature Viewer

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Pfam ID	Name	% Frequency in 182 Family Scaffolds
PF00206	Lyase_1	28.57
PF10415	FumaraseC_C	6.59
PF03167	UDG	5.49
PF03793	PASTA	4.40
PF03576	Peptidase_S58	2.20
PF00106	adh_short	1.10
PF00903	Glyoxalase	1.10
PF00208	ELFV_dehydrog	1.10
PF01361	Tautomerase	0.55
PF00459	Inositol_P	0.55
PF12146	Hydrolase_4	0.55
PF01471	PG_binding_1	0.55
PF01850	PIN	0.55
PF07731	Cu-oxidase_2	0.55
PF07687	M20_dimer	0.55
PF02113	Peptidase_S13	0.55
PF13228	DUF4037	0.55
PF02012	BNR	0.55
PF07883	Cupin_2	0.55
PF00089	Trypsin	0.55
PF03061	4HBT	0.55
PF02826	2-Hacid_dh_C	0.55
PF00117	GATase	0.55
PF13302	Acetyltransf_3	0.55
PF13620	CarboxypepD_reg	0.55
PF01636	APH	0.55
PF00440	TetR_N	0.55
PF02621	VitK2_biosynth	0.55
PF00107	ADH_zinc_N	0.55
PF08281	Sigma70_r4_2	0.55
PF04055	Radical_SAM	0.55
PF14016	DUF4232	0.55
PF02812	ELFV_dehydrog_N	0.55
PF05547	Peptidase_M6	0.55

COG ID	Name	Functional Category	% Frequency in 182 Family Scaffolds
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	5.49
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	5.49
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	5.49
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	4.40
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	1.65
COG2902	NAD-specific glutamate dehydrogenase	Amino acid transport and metabolism [E]	1.10
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	0.55
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.55
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.55
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.55
COG4412	Bacillopeptidase F, M6 metalloprotease family	Posttranslational modification, protein turnover, chaperones [O]	0.55

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.45 %
All Organisms	root	All Organisms	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.45 %
cellular organisms	root	All Organisms → cellular organisms	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.55 %

Scaffold	Taxonomy	Length	IMG/M Link
3300014968\|Ga0157379_10122509	All Organisms → cellular organisms → Bacteria	2340	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.67%
Host-Associated	Host-Associated	20.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.08%
Plants	Host-Associated → Plants	20.33%
Aquatic	Environmental → Aquatic	6.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.79%
Sediment	Environmental → Aquatic → Sediment	4.95%
Peat	Environmental → Terrestrial → Peat	1.65%
Freshwater	Environmental → Aquatic → Freshwater	1.10%
Marine	Environmental → Aquatic → Marine	0.55%
Roots	Host-Associated → Plants → Roots	0.55%
Phylloplane	Host-Associated → Plants → Phylloplane	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.49%
Loam	Environmental → Terrestrial → Soil → Loam	10.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.95%
Sand	Environmental → Terrestrial → Soil → Sand	3.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.55%
Ice	Environmental → Aquatic → Freshwater → Ice	0.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.55%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.55%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.85%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.30%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.65%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.10%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.10%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.55%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.55%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.55%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.55%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.55%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.24%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.85%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.65%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.10%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.10%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.10%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.55%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.55%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.55%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.55%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.55%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.55%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002564	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025864	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026940	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1-12 (SPAdes)	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034143	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 57SNS	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101743561	3300000597	Forest Soil	VAGYPGKITLITIGMGEAAIAANNAIASIRGEKVQPKYSTD*
JGI10213J12805_101538441	3300000858	Soil	KITLITIGMGEAAIAANNAIAAIRGEKVQPKYSTD*
JGI11643J12802_105597841	3300000890	Soil	ITLITIGMGEAAIAANNAIARIRGEKVQPKYSTD*
JGI11643J12802_121950182	3300000890	Soil	GYPGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD*
JGI24134J36421_100279441	3300002564	Arctic Peat Soil	GYEGKITLITVALAEAAMAANNAIAEIRHEKAQPEYSSE*
C688J35102_1209683151	3300002568	Soil	DVAGFDGKITLITVGFSEAALAANHAVARIRGEKAQPKYSTE*
Ga0055472_100004398	3300003998	Natural And Restored Wetlands	DVAGYEGKITLITVGFGEAAIAANNAIARIRGEKVQPKYSTD*
Ga0063454_1016910921	3300004081	Soil	GYEGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD*
Ga0063455_1007077851	3300004153	Soil	GYDGKITLITIGFSEAAIAANHAVARIRGEKAQPKYSTE*
Ga0062590_1015067641	3300004157	Soil	GYEGKITLISVGFGEAAIAANNAIAQIRGEKVQPKYSTD*
Ga0062595_1014465032	3300004479	Soil	AGFDGKITLITVGFSEAALAANHAVARIRGEKAQPKYSTE*
Ga0062591_1000548233	3300004643	Soil	GYEGKITLITIGMGEAAIAANNAVASIRGEKVQPKYSTD*
Ga0066679_107028091	3300005176	Soil	AGYPGKITLITIGMGEAAIAANNAVAQIRGEKVQPKYSTD*
Ga0066690_109711521	3300005177	Soil	GYPGKITLITIGMGEAAIAANNAVAQIRGEKVQPKYSTD*
Ga0066688_104937063	3300005178	Soil	VAGYPGKITLITIGMGEAAIAANNAVAQIRGEKVQPKYSTD*
Ga0070691_102552531	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	GYPGKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD*
Ga0070692_109956521	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	DVAGYEGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD*
Ga0070709_105768113	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VAGYPGKITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD*
Ga0070709_105971753	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GYPGKITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD*
Ga0070700_1005414211	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	GDVAGYPGKITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD*
Ga0066681_109672192	3300005451	Soil	VAGYPGKITLITIGMGEAAIAANNAVATIRGEKVQPKYSTD*
Ga0070662_1000878561	3300005457	Corn Rhizosphere	VAGYEGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD*
Ga0073909_101794433	3300005526	Surface Soil	ITLITIGFGEAAIAANNAIARIRGEKVQPKYSTD*
Ga0073909_106202132	3300005526	Surface Soil	GDVAGYEGKITLITVGFSEAAIAANHCVARIRGEKVQPKYSTE*
Ga0070693_1001868831	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	DVAGYEGKITLITVGFSEAAIAANHCVARIRGEKVQPKYSTE*
Ga0066695_101690092	3300005553	Soil	GKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD*
Ga0066704_101139381	3300005557	Soil	VAGYDGKITLITVGMGEAAIAANNAIAAIRGEKVQPKYSTD*
Ga0066670_108155253	3300005560	Soil	ITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD*
Ga0068854_1022783451	3300005578	Corn Rhizosphere	DVAGYPGKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD*
Ga0066905_1016629621	3300005713	Tropical Forest Soil	AGYPGKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD*
Ga0068861_1018108791	3300005719	Switchgrass Rhizosphere	YPGKITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD*
Ga0066903_1072005852	3300005764	Tropical Forest Soil	VAYYDGKITLITIGLGEAAIAANQCVARVRGVKVQPAYSSE*
Ga0068851_105324892	3300005834	Corn Rhizosphere	DGKITLITIGFSEAAIAANHAVARIRGEKAQPKYSTE*
Ga0068862_1007633341	3300005844	Switchgrass Rhizosphere	MAGYDGKITLITIGFSEAAIAANHAVARIRGEKAQPKYSTE*
Ga0066794_100819962	3300005947	Soil	DVAGYEGKITLITIALAEAAIAANNAIAEIRHEKAQPEYSSE*
Ga0066651_101759701	3300006031	Soil	AAGDVAGYPGKITLITIGMGEAAIAANNAVATIRGEKVQPKYSTD*
Ga0066651_102553221	3300006031	Soil	AAGDVAGYPGKITLITIGMGEAAIAANNAVAQIRGEKVQPKYSTD*
Ga0066656_107542441	3300006034	Soil	GYPGKITLITIGMGEAAIAANNAIAQIRGGKVQPKYSTD*
Ga0066652_1000775031	3300006046	Soil	PGKITLITIGMGEAAIAANNAVAQIRGEKVQPKYSTD*
Ga0066652_1014186271	3300006046	Soil	DVAGYPGKITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD*
Ga0070716_1010845712	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DVAGYEGKITLITIGMGEAAIAANNAVAQIRGEKVQPKYSTD*
Ga0070712_1017916273	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KITLITIGMGEAAIAANNAVAAIRDEKVQPKYSTD*
Ga0068871_1013549143	3300006358	Miscanthus Rhizosphere	DVAGYEGKITLITVGFSEAALAANHAVARIRGEKAQPKYSTE*
Ga0074059_117901743	3300006578	Soil	AGYDGKITLITVGFSEAALAANHAVARIRGEKAQPKYSTE*
Ga0075430_1000229487	3300006846	Populus Rhizosphere	AAGDVAGYPGKITLITIGMGEAAIAANNAIAQFRGEKVQPKYSTD*
Ga0075429_1011807732	3300006880	Populus Rhizosphere	GKITLISIGFGEAAIAANNAIARIRGEKVQPKYSTD*
Ga0068865_1017188991	3300006881	Miscanthus Rhizosphere	AGDVAGYEGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD*
Ga0079215_108833263	3300006894	Agricultural Soil	VAGYDGKITLISVGFGEAAIAANNAIARIRGEKVQPKYSTD*
Ga0074063_100092763	3300006953	Soil	AAGDVAGYPGKITLITIGMGEAAIAANNAIARIRGEKVQPKYSTD*
Ga0079219_104920653	3300006954	Agricultural Soil	AGYEGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD*
Ga0099830_109150322	3300009088	Vadose Zone Soil	DVAGYEGKITLITVGMGEASIAANNAIAEIRGEKVQPKYSTE*
Ga0105241_124296872	3300009174	Corn Rhizosphere	AGFDGKITLITVGFAEAALAANHAVARIRGEKAQPKYSTE*
Ga0105242_116632753	3300009176	Miscanthus Rhizosphere	GYDGKITLITIGFGEAAIAANNAIARIRGEKVQPKYSTD*
Ga0105242_129144942	3300009176	Miscanthus Rhizosphere	VAYYEGKITLITIGLGEAAIAANQCVARARGVKLQPAYSTE*
Ga0105056_10498071	3300009801	Groundwater Sand	KITLITIGMGEAAIAANNAIARIRGEKVQPKYSTD*
Ga0105088_10431252	3300009810	Groundwater Sand	KITLISVGFGEAAIAANNAIAKIRGEKVQPKYSTD*
Ga0105058_11622901	3300009837	Groundwater Sand	KITLITVGMGEAAIAANNAIAAIRGEKVQPKYSTD*
Ga0126313_100123445	3300009840	Serpentine Soil	DVAGYPGKITLITVGMGEAAIAANNAIAAMRGEKVQPKYSTD*
Ga0126313_113827771	3300009840	Serpentine Soil	WDVAGYPGKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD*
Ga0126305_102145182	3300010036	Serpentine Soil	GSHVAAVAQAVGYEGKITLITIGMAEAAIAANNAVAQIHGEKVQPKYSTD*
Ga0126305_107315551	3300010036	Serpentine Soil	ITLITVGMGEAAIAANNAIAAIRGEKVQPKYSTD*
Ga0126308_100643493	3300010040	Serpentine Soil	KITLISVGFGEAAIAANNAIARIRGEKVQPKYSTD*
Ga0126380_116709021	3300010043	Tropical Forest Soil	AAGDVAGYPGKITLITIGMGEAAIAANNAIAAIRGEKVQPKYSTD*
Ga0126310_112933763	3300010044	Serpentine Soil	GYAGKITLITVGMGEAAIAANNVIAAIRGEKVQPKYSTD*
Ga0126311_100072188	3300010045	Serpentine Soil	AGDVAGYPGKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD*
Ga0126382_107904622	3300010047	Tropical Forest Soil	GYEGKITLITIGMGEAAIAANNAIARIRGEKVQPKYSTD*
Ga0134065_104384203	3300010326	Grasslands Soil	GYPGKITLITIGMGEAAIAANNAVATIRGEKVQPKYSTD*
Ga0134062_107412591	3300010337	Grasslands Soil	GDVAGYPGKITLITIGMGEAAIAANNAVASIRGEKVQPKYSTD*
Ga0126376_117614641	3300010359	Tropical Forest Soil	GDVAGYEGKITLITIGMGEAAIAENNAVASIRGEKVQPKYSTD*
Ga0134124_104405253	3300010397	Terrestrial Soil	YEGKITLITIGFGEAAIAANNAIARIRGEKVQPKYSTD*
Ga0134124_106439343	3300010397	Terrestrial Soil	AGDVAGYPGKITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD*
Ga0134124_116431212	3300010397	Terrestrial Soil	GKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD*
Ga0151490_12896071	3300011107	Soil	GDVAGYDGKITLITVGFSEAALAANHAVARIRGEKAQPKYSTE*
Ga0137429_11981362	3300011437	Soil	EGKITLISIGFGEAAIAANQAVAKIRGEKVQPKYSTD*
Ga0120134_10326591	3300012004	Permafrost	KITLITIGLGEAAIATNQCVARARGVKLQPAYSTE*
Ga0136622_101505211	3300012187	Polar Desert Sand	PGKITLITIGMGEAAIAANNAVAQIRGEKPQPKYSTD*
Ga0137364_111507631	3300012198	Vadose Zone Soil	PGVSAAGDVAGYPAKITLITIGMGEPAIPANNALASIRGEKVQPKYSTD*
Ga0137381_116345031	3300012207	Vadose Zone Soil	AAGDVAGYPGKITLITIGMGEAAVAANNAVAQIRGEKVQPKYSTD*
Ga0137376_112427723	3300012208	Vadose Zone Soil	DVAGYPGKITLITIGMGEAAIAANNAVASIRGEKVQPKYSTD*
Ga0137377_105082441	3300012211	Vadose Zone Soil	YPGKITLITIGMGEAAIAANNAVASIRGEKVQPKYSTD*
Ga0137377_114509001	3300012211	Vadose Zone Soil	GDVAGYPGKITLITIGIGEAAIAANNAVAAIRGENVQPKYSTD*
Ga0137373_101377481	3300012532	Vadose Zone Soil	KITLITIGMGEAAVAANNAIAQIRGEKVQPKYSTD*
Ga0157300_10083342	3300012884	Soil	DVAGYEGKITLITIGMGEAAIAANNAIARIRGEKVQPKYSTD*
Ga0164302_106243361	3300012961	Soil	GYPGTITLITIGMGEAAIAATKAVAAIRREKVQPKYSTD*
Ga0134087_105332992	3300012977	Grasslands Soil	DVAGYPGKITLITIGMGEAAIAANNAVAEIRGEKVQPKYSTD*
Ga0164309_102359882	3300012984	Soil	YPGKITLITIGMGEAAIAANNAVAQIRGEKVQPKYSTD*
Ga0164307_110694611	3300012987	Soil	GYEGKITLITVGFSEAALAANHAVAHIRGEKAQPKYSTE*
Ga0164305_105997001	3300012989	Soil	YEGKITLITVGFSEAALAANHAVAHIRGEKAQPKYSTE*
Ga0157370_103734071	3300013104	Corn Rhizosphere	ITLITIGFSEAAIAANHAVARIRGEKAQPKYSTE*
Ga0163162_107879393	3300013306	Switchgrass Rhizosphere	EGKITLISIGFGEAAIAANNAIARIRGEKVQPKYSTD*
Ga0120154_10827902	3300013501	Permafrost	ITLITIGMGEAAIAANNVIARIRGEKVQPKYSTD*
Ga0120179_11530351	3300013763	Permafrost	PGKITLITIGMGEAAIAANNAIARIRGEKVQPKYSTD*
Ga0134078_102756873	3300014157	Grasslands Soil	AGDVAGYPGKITLITVGMGEAAIAANNAVAQIRGEKVQPKYSTD*
Ga0075326_10563813	3300014271	Natural And Restored Wetlands	VAGYEGKITLITIGFGAAAIAANNAIARIRGEKVQPKYSTD*
Ga0157380_110367232	3300014326	Switchgrass Rhizosphere	VAGYPGKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD*
Ga0182001_105239932	3300014488	Soil	KITLITIGMGEAAIAANNAVAQIRGEKVQPKYSTD*
Ga0182027_107815952	3300014839	Fen	VAGYEGKITLITIALAEAAMAANNAVAEIRHEKAQPEYSSE*
Ga0157379_101225094	3300014968	Switchgrass Rhizosphere	YEGKITLITVGFSEAAIAANHCVARIRGEKVQPKYSTE*
Ga0132258_114728564	3300015371	Arabidopsis Rhizosphere	AGDVAGYEGKITLITVGFSEAALAANHAVARIRGEKAQPKYSTE*
Ga0132256_1034233801	3300015372	Arabidopsis Rhizosphere	ITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD*
Ga0132257_1003729064	3300015373	Arabidopsis Rhizosphere	AGDGAGYPGKITLITIGMGEAAIAANNAVAQIRGEKVQPKYSTD*
Ga0132255_1019707221	3300015374	Arabidopsis Rhizosphere	GKITLITIGMGEAAIAANNAVASIRGEKVQPKYSTD*
Ga0184608_101892553	3300018028	Groundwater Sediment	GKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD
Ga0184634_102185381	3300018031	Groundwater Sediment	KITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD
Ga0184634_102970643	3300018031	Groundwater Sediment	GYEGKITLISIGFGEAAVAANNAIARIRGEKVQPKYSTD
Ga0184624_102728442	3300018073	Groundwater Sediment	AAGDVAGYEGKITLITIGMGEAAIAANNAIARIRGEKVQPKYSTD
Ga0184624_102877741	3300018073	Groundwater Sediment	GKITLITIGFGEAAIAANNAIARIRGEKVQPKYSTD
Ga0066655_105373601	3300018431	Grasslands Soil	YPGKITLITIGMGEAAIAANNAVATIRGEKVQPKYSTD
Ga0190275_131892683	3300018432	Soil	GKITLITVGFGEAAIAANNAIAKIRGEKVQPKYSTD
Ga0066662_121336882	3300018468	Grasslands Soil	GKITLITIGMGEAAIAANNAVASIRGEKVQPKYSTD
Ga0066669_109754391	3300018482	Grasslands Soil	PGKITLITIGMGEAAIAANNAVAQIRGEKVQPKYSTD
Ga0190264_112089882	3300019377	Soil	KITLISIGFGEAAIAANQAIARIRGEKIQPKYSTD
Ga0193704_10470351	3300019867	Soil	GYPGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD
Ga0193705_10525851	3300019869	Soil	GDVAGYPGKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD
Ga0193755_11723831	3300020004	Soil	AGDVAYYEGKITLITIGLGEAAIAANQCVARARGVKLQPAYSTE
Ga0193697_10039731	3300020005	Soil	AGYEGKITLITIGFGEAAIAANNAIARIRGEKVQPKYSTD
Ga0193721_10719071	3300020018	Soil	GKITLITIGMGEAAIAANNALAMIRGEKVQPKYSTD
Ga0210381_100363731	3300021078	Groundwater Sediment	GDVAGYPGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD
Ga0182009_106931231	3300021445	Soil	AAGDVAGYPGKITLITVGMGEAAIAANNAIAQIRGEKVQPKYSTD
Ga0222623_103414341	3300022694	Groundwater Sediment	VAGYPGKITLITIGMGEAAIAANNAIAHIRGEKVQPKYSTD
Ga0222622_103167143	3300022756	Groundwater Sediment	KITLITIGMGEAAIAANNAVASIRGEKVQPKYSTD
Ga0222622_109414072	3300022756	Groundwater Sediment	AGDVAGYEGKITLITVGFSEAALAANHAVARIRGEKAQPKYSTE
Ga0247672_10431873	3300024187	Soil	AGDVAGYPGKITLITIGMGEAAIAANNAVASIRGEKVQPKYSTD
Ga0209429_101330151	3300025864	Arctic Peat Soil	DVAGYEGKITLITIGLAEAAMAANNAVAEIRHEKAQPEYSSE
Ga0207685_100441901	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	GDVAGYPGKITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD
Ga0207654_112981572	3300025911	Corn Rhizosphere	YEGKITLITVGFSEAAIAANHCVARIRGEKVQPKYSTE
Ga0207693_102809521	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AGYPGKITLITIGMGEAAIAANNAVAAIRDEKVQPKYSTD
Ga0207662_108540381	3300025918	Switchgrass Rhizosphere	EGKITLITIGMGEAAIAANNAVASIRGEKVQPKYSTD
Ga0207687_115449432	3300025927	Miscanthus Rhizosphere	GKITLISIGFGEAAIAANNAIARIRGEKVQPKYSTD
Ga0207690_104330372	3300025932	Corn Rhizosphere	AAGDVAGYEGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD
Ga0207709_106726212	3300025935	Miscanthus Rhizosphere	YEGKITLITIGFSEAAIAANHAVARIRGEKAQPKYSTE
Ga0207665_108257352	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	YPGKITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD
Ga0207665_109870342	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VAYYEGKITLITIGLGEAAIAANQCVARARGVKLQPAYSTE
Ga0207679_102642381	3300025945	Corn Rhizosphere	YPGKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD
Ga0207640_109162311	3300025981	Corn Rhizosphere	GYEGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD
Ga0207640_112618583	3300025981	Corn Rhizosphere	AAGDVAGYPGKITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD
Ga0207677_104932273	3300026023	Miscanthus Rhizosphere	VAGYEGKITLISIGFGEAAIAANNAIARIRGEKVQPKYSTD
Ga0207639_107757161	3300026041	Corn Rhizosphere	VAGFYGKITLITVGFSEAALSANHAVARIRGEKAQPKYSTE
Ga0207641_111078333	3300026088	Switchgrass Rhizosphere	GDVAGYEGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD
Ga0209027_12828452	3300026300	Grasslands Soil	VAGYPGKITLITVGMGEAAIAANNAIAEIRGEKVQPKYSTD
Ga0256867_100112024	3300026535	Soil	GYEGKITLISIGFGEAAIAANQAVAKIRGEKVQPKYSTD
Ga0207521_1042513	3300026940	Soil	MLAIGRAAGDVAGYPGKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD
Ga0209897_10529022	3300027169	Groundwater Sand	EGKITLISVGFGEAAIAANNAIAKIRGEKVQPKYSTD
Ga0209842_10054473	3300027379	Groundwater Sand	GYEGKITLISVGFGEAAVAANQAVAKIRGEKVQPKYSTD
Ga0209842_10793063	3300027379	Groundwater Sand	GKITLISVGFGEAAVAANQAVAKIRGEKVQPKYSTD
Ga0209074_102212691	3300027787	Agricultural Soil	DVAGYPGKITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD
Ga0209574_103600872	3300027809	Agave	FDGKITLITVGFAEAALAANHAVARIRGEKAQPKYSTE
Ga0209465_106026522	3300027874	Tropical Forest Soil	DGKITLITVGFSEAAIAANHAVARIRGEKAQPKYSTE
Ga0207428_100336054	3300027907	Populus Rhizosphere	GYEGKITLISIGFGEAAIAANNAIARIRGEKVQPKYSTD
Ga0209382_105405921	3300027909	Populus Rhizosphere	GYPGKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD
Ga0209889_11226862	3300027952	Groundwater Sand	KITLISVGFGEAAIAANNAIAAIRGEKVQPKYSTD
Ga0268265_106590723	3300028380	Switchgrass Rhizosphere	AAGDMAGYDGKITLITIGFSEAAIAANHAVARIRGEKAQPKYSTE
Ga0268265_106704281	3300028380	Switchgrass Rhizosphere	GDVAGYEGKITLITVGFSEAAIAANHCVARIRGEKVQPKYSTE
Ga0265319_12406222	3300028563	Rhizosphere	AHYEGKITLITIGLGEAAIAANQCVARARGVKLQPAYSTE
Ga0265334_102220951	3300028573	Rhizosphere	VAHYEGKITLITIGLGEAAIAANQCVARARGVKLQPAYSTE
Ga0247828_105874711	3300028587	Soil	DGKITLITVGFSEAALAANHAVARIRGEKAQPKYSTE
Ga0307291_11263611	3300028707	Soil	KITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD
Ga0307322_100998862	3300028710	Soil	VAGYPGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD
Ga0307322_101982761	3300028710	Soil	DGKITLISVGFGEAAIAANNAIARIRGEKVQPKYSTD
Ga0307307_103079992	3300028718	Soil	PGKITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD
Ga0307301_100063184	3300028719	Soil	GYEGKITLITIGFGEAAIAANNAIARIRGEKVQPKYSTD
Ga0307297_100018416	3300028754	Soil	DVAGYPGKITLITIGMGEAAIAANNAVAEIRGEKVQPKYSTD
Ga0307306_100020161	3300028782	Soil	GYPGKITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD
Ga0307323_102518251	3300028787	Soil	GYPGKITLITIGMGEAAIAANNAVAEIRGEKVQPKYSTD
Ga0307323_102663052	3300028787	Soil	VAGYPGKITLITIGMGEAAIAANNAVAAIRGEKVQPKYSTD
Ga0307284_101091312	3300028799	Soil	YEGKITLITIGMGEAAIAANNAVARIRGEKVQPKYSTD
Ga0307312_109457222	3300028828	Soil	DVAGYPGKITLITIGMGEAAIASNNAIALIRGEKVQPKYSTD
Ga0307314_101655951	3300028872	Soil	GDVAGYEGKITLITVGFSEAALAANHAVARIRGEKAQPKYSTE
Ga0307286_102412672	3300028876	Soil	GKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD
Ga0307278_104405501	3300028878	Soil	AAGDVAGYPEKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD
Ga0307308_104223552	3300028884	Soil	AAGDVAGYPGKITLITIGMGEAAIAANNAVAAIQGEKVQPKYSTD
Ga0311336_112995341	3300029990	Fen	GKITLITIGLGEAAIAANQCVARARGVKLQPAYSTE
Ga0302299_105828382	3300030010	Fen	EGKITLITIGLGEAAIAANQCVARARGVKLQPAYSTE
Ga0299914_110712141	3300031228	Soil	EGKITLITIGFGEAAIAANNAIAKIRGEKVQPKYSTD
Ga0307469_116210422	3300031720	Hardwood Forest Soil	DVAGYPGKITLITIGMGEAAIAANNAIAQIRGEKVQPKYSTD
Ga0311351_114303541	3300031722	Fen	GYEGKITLITIALAEAAMAANNAVAEIRHEKAQPEYSSE
Ga0307468_1023086892	3300031740	Hardwood Forest Soil	KITLITIGFSEAAIAANHAVARIRGEKAQPKYSTE
Ga0308175_1004216292	3300031938	Soil	GYEGKITLITIGMGEAAIAANNAIARIRGEKVQPKYSTD
Ga0308176_113865192	3300031996	Soil	GYPGKITLITIGMGEAAIAANNAVAQIRGEKVQPKYSTD
Ga0307471_1025371082	3300032180	Hardwood Forest Soil	GDVAYYEGKITLITIGLGEAAIAANQCVARARGVKLQPAYSTE
Ga0334961_022882_942_1058	3300034143	Sub-Biocrust Soil	YDGKITLITIGLGEAAIAANQCVARVRGVKVQPTYSTE
Ga0334932_073124_1_126	3300034174	Sub-Biocrust Soil	VAGYEGKITLITIGMGEAAVAANNAIARIRGEKVQPKYSTD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031610

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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