Metagenome / Metatranscriptome Family F031018

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F031018
Family Type	Metagenome / Metatranscriptome
Number of Sequences	183
Average Sequence Length	42 residues
Representative Sequence	MQGTAEFHHQIADALLPQADPVFHDATALDTAVDMLDPQPT
Number of Associated Samples	133
Number of Associated Scaffolds	183

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.89 %
% of genes near scaffold ends (potentially truncated)	69.95 %
% of genes from short scaffolds (< 2000 bps)	86.34 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.596 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (38.251 % of family members)
Environment Ontology (ENVO)	Unclassified (49.180 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.481 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 183 Family Scaffolds
PF13561	adh_short_C2	2.73
PF12759	HTH_Tnp_IS1	2.19
PF00496	SBP_bac_5	1.64
PF13610	DDE_Tnp_IS240	1.09
PF16868	NMT1_3	1.09
PF01850	PIN	1.09
PF13613	HTH_Tnp_4	1.09
PF13546	DDE_5	1.09
PF13358	DDE_3	1.09
PF03400	DDE_Tnp_IS1	1.09
PF01797	Y1_Tnp	1.09
PF06114	Peptidase_M78	1.09
PF00480	ROK	0.55
PF00691	OmpA	0.55
PF00296	Bac_luciferase	0.55
PF04909	Amidohydro_2	0.55
PF00076	RRM_1	0.55
PF11455	MazE-like	0.55
PF07592	DDE_Tnp_ISAZ013	0.55
PF00589	Phage_integrase	0.55
PF00872	Transposase_mut	0.55
PF05567	Neisseria_PilC	0.55
PF00561	Abhydrolase_1	0.55
PF02371	Transposase_20	0.55
PF00079	Serpin	0.55
PF01610	DDE_Tnp_ISL3	0.55
PF13683	rve_3	0.55
PF10282	Lactonase	0.55
PF10431	ClpB_D2-small	0.55
PF01047	MarR	0.55
PF01527	HTH_Tnp_1	0.55
PF07040	DUF1326	0.55
PF01425	Amidase	0.55
PF00126	HTH_1	0.55
PF13506	Glyco_transf_21	0.55
PF13592	HTH_33	0.55
PF00106	adh_short	0.55
PF13470	PIN_3	0.55
PF04255	DUF433	0.55
PF04365	BrnT_toxin	0.55
PF03743	TrbI	0.55
PF14294	DUF4372	0.55
PF02852	Pyr_redox_dim	0.55
PF05239	PRC	0.55
PF02669	KdpC	0.55
PF13359	DDE_Tnp_4	0.55
PF00534	Glycos_transf_1	0.55
PF01609	DDE_Tnp_1	0.55
PF00078	RVT_1	0.55
PF12695	Abhydrolase_5	0.55
PF14104	DUF4277	0.55
PF07859	Abhydrolase_3	0.55
PF03781	FGE-sulfatase	0.55
PF03050	DDE_Tnp_IS66	0.55
PF07042	TrfA	0.55
PF01927	Mut7-C	0.55
PF13586	DDE_Tnp_1_2	0.55
PF01656	CbiA	0.55
PF14319	Zn_Tnp_IS91	0.55

COG ID	Name	Functional Category	% Frequency in 183 Family Scaffolds
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	1.09
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.09
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.09
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.55
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.55
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.55
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.55
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.55
COG4826	Serine protease inhibitor	Posttranslational modification, protein turnover, chaperones [O]	0.55
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.55
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.55
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.55
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.55
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.55
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.55
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.55
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.55
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.55
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.55
COG2156	K+-transporting ATPase, KdpC subunit	Inorganic ion transport and metabolism [P]	0.55
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.55
COG1656	Uncharacterized conserved protein, contains PIN-related Mut7-C RNAse domain	General function prediction only [R]	0.55
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.55
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.60 %
Unclassified	root	N/A	22.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.60 %
Unclassified	root	N/A	22.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.60 %
Unclassified	root	N/A	22.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.19 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.64 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.40 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	6.01 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.19 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.64 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.09 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1.09 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.09 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.55 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.55 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.40 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	6.01 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.19 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.09 %
unclassified Candidatus Omnitrophica	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica	1.09 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	1.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.09 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.55 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.55 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.40 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	4.92 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.64 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.09 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1.09 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.09 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.55 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	0.55 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.55 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.55 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.55 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.40 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	4.37 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.64 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	1.09 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.09 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1.09 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.55 %
SAR202 cluster bacterium AC-409-J13_OGT_754m	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AC-409-J13_OGT_754m	0.55 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.55 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.55 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.55 %
Skermanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella	0.55 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.55 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.40 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	4.37 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.64 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	1.09 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.09 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1.09 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.55 %
Planctomyces	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces	0.55 %
Afipia carboxidovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	0.55 %
Skermanella aerolata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	0.55 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.55 %
SAR202 cluster bacterium AC-409-J13_OGT_754m	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AC-409-J13_OGT_754m	0.55 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.55 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.40 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	4.37 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.64 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	1.09 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.09 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1.09 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
unclassified Planctomyces	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces → unclassified Planctomyces	0.55 %
Afipia carboxidovorans OM5	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans → Afipia carboxidovorans OM5	0.55 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.55 %
Skermanella aerolata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	0.55 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.55 %
SAR202 cluster bacterium AC-409-J13_OGT_754m	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AC-409-J13_OGT_754m	0.55 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.55 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.40 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	4.37 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.64 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	1.09 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.09 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1.09 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
Planctomyces sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces → unclassified Planctomyces → Planctomyces sp.	0.55 %
Afipia carboxidovorans OM5	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans → Afipia carboxidovorans OM5	0.55 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.55 %
Skermanella aerolata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	0.55 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.55 %
SAR202 cluster bacterium AC-409-J13_OGT_754m	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AC-409-J13_OGT_754m	0.55 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.55 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_10012229	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300000955\|JGI1027J12803_102345553	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300000955\|JGI1027J12803_103297572	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300000956\|JGI10216J12902_123282216	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300001686\|C688J18823_10845916	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300002245\|JGIcombinedJ26739_100503316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1088	Open in IMG/M
3300004268\|Ga0066398_10223654	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300004633\|Ga0066395_10298581	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300005179\|Ga0066684_10899377	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300005187\|Ga0066675_10409687	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300005294\|Ga0065705_10444303	Not Available	832	Open in IMG/M
3300005364\|Ga0070673_101994930	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005445\|Ga0070708_102214814	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005467\|Ga0070706_100978439	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300005518\|Ga0070699_100151651	All Organisms → cellular organisms → Bacteria	2050	Open in IMG/M
3300005518\|Ga0070699_100203211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans → Afipia carboxidovorans OM5	1762	Open in IMG/M
3300005547\|Ga0070693_101428394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	539	Open in IMG/M
3300005713\|Ga0066905_101800655	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300006049\|Ga0075417_10210717	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300006845\|Ga0075421_102339203	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300006854\|Ga0075425_100208089	All Organisms → cellular organisms → Bacteria → Proteobacteria	2249	Open in IMG/M
3300006854\|Ga0075425_101052524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	927	Open in IMG/M
3300006854\|Ga0075425_102160795	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300006871\|Ga0075434_100252987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1781	Open in IMG/M
3300006969\|Ga0075419_11178104	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300009012\|Ga0066710_101480472	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300009038\|Ga0099829_10045757	All Organisms → cellular organisms → Bacteria	3215	Open in IMG/M
3300009038\|Ga0099829_11222574	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300009038\|Ga0099829_11535567	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300009088\|Ga0099830_10814513	Not Available	771	Open in IMG/M
3300009089\|Ga0099828_10217532	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300009089\|Ga0099828_11467202	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300009090\|Ga0099827_10452111	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300009090\|Ga0099827_10638867	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300009090\|Ga0099827_10847765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	791	Open in IMG/M
3300009090\|Ga0099827_11030814	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300009090\|Ga0099827_11425803	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300009090\|Ga0099827_11689169	Not Available	552	Open in IMG/M
3300009094\|Ga0111539_10127034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	2987	Open in IMG/M
3300009094\|Ga0111539_11349328	Not Available	827	Open in IMG/M
3300009094\|Ga0111539_11999137	Not Available	672	Open in IMG/M
3300009098\|Ga0105245_13270508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	502	Open in IMG/M
3300009100\|Ga0075418_11222892	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300009100\|Ga0075418_11941656	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300009100\|Ga0075418_12707536	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300009100\|Ga0075418_12761670	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300009101\|Ga0105247_10021421	All Organisms → cellular organisms → Bacteria	3890	Open in IMG/M
3300009143\|Ga0099792_10353962	Not Available	887	Open in IMG/M
3300009143\|Ga0099792_11117721	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300009147\|Ga0114129_12358846	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300009553\|Ga0105249_11544039	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300009815\|Ga0105070_1006466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1842	Open in IMG/M
3300009818\|Ga0105072_1096163	Not Available	591	Open in IMG/M
3300009820\|Ga0105085_1078802	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300009821\|Ga0105064_1038297	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300009836\|Ga0105068_1011951	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300010046\|Ga0126384_10496605	Not Available	1051	Open in IMG/M
3300010047\|Ga0126382_11530953	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300010358\|Ga0126370_11969921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	570	Open in IMG/M
3300010359\|Ga0126376_10689153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	981	Open in IMG/M
3300010359\|Ga0126376_12613334	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010360\|Ga0126372_10858232	Not Available	906	Open in IMG/M
3300010361\|Ga0126378_13207666	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300010397\|Ga0134124_12071049	Not Available	607	Open in IMG/M
3300010398\|Ga0126383_12764785	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300010399\|Ga0134127_13172731	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300011119\|Ga0105246_11962415	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300011271\|Ga0137393_11067295	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300012096\|Ga0137389_10601345	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300012096\|Ga0137389_11051726	Not Available	697	Open in IMG/M
3300012096\|Ga0137389_11703226	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012167\|Ga0137319_1116274	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012189\|Ga0137388_11415995	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012199\|Ga0137383_10113793	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300012199\|Ga0137383_10466418	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	925	Open in IMG/M
3300012199\|Ga0137383_10639581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AC-409-J13_OGT_754m	778	Open in IMG/M
3300012199\|Ga0137383_10810548	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	683	Open in IMG/M
3300012201\|Ga0137365_10497258	Not Available	896	Open in IMG/M
3300012201\|Ga0137365_10500922	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300012204\|Ga0137374_10684048	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300012206\|Ga0137380_11544955	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012207\|Ga0137381_10158832	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300012207\|Ga0137381_10295573	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300012209\|Ga0137379_10850439	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300012210\|Ga0137378_10955313	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300012212\|Ga0150985_109458671	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300012212\|Ga0150985_120216393	Not Available	854	Open in IMG/M
3300012349\|Ga0137387_10584399	Not Available	810	Open in IMG/M
3300012353\|Ga0137367_11053242	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300012354\|Ga0137366_10420395	Not Available	972	Open in IMG/M
3300012356\|Ga0137371_10691016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	781	Open in IMG/M
3300012357\|Ga0137384_10849037	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300012358\|Ga0137368_10537936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	749	Open in IMG/M
3300012359\|Ga0137385_11347569	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300012360\|Ga0137375_10620420	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300012361\|Ga0137360_10078642	All Organisms → cellular organisms → Bacteria → Proteobacteria	2466	Open in IMG/M
3300012362\|Ga0137361_10140617	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2147	Open in IMG/M
3300012362\|Ga0137361_10890364	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300012362\|Ga0137361_11389046	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300012362\|Ga0137361_11429951	Not Available	614	Open in IMG/M
3300012363\|Ga0137390_10427747	Not Available	1301	Open in IMG/M
3300012469\|Ga0150984_112196969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1297	Open in IMG/M
3300012469\|Ga0150984_116251819	Not Available	1032	Open in IMG/M
3300012483\|Ga0157337_1002016	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300012532\|Ga0137373_10975149	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	616	Open in IMG/M
3300012912\|Ga0157306_10389673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300012914\|Ga0157297_10417253	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300012918\|Ga0137396_10423641	Not Available	987	Open in IMG/M
3300012929\|Ga0137404_10997109	Not Available	766	Open in IMG/M
3300012930\|Ga0137407_10919543	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300012944\|Ga0137410_10102772	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	2121	Open in IMG/M
3300012944\|Ga0137410_10360477	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300012948\|Ga0126375_10231490	Not Available	1237	Open in IMG/M
3300012987\|Ga0164307_10111150	Not Available	1737	Open in IMG/M
3300015053\|Ga0137405_1330322	Not Available	6918	Open in IMG/M
3300015053\|Ga0137405_1397029	All Organisms → cellular organisms → Bacteria → Proteobacteria	3649	Open in IMG/M
3300015245\|Ga0137409_10243213	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1601	Open in IMG/M
3300015245\|Ga0137409_10860269	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300015358\|Ga0134089_10351099	Not Available	621	Open in IMG/M
3300017940\|Ga0187853_10423406	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300018056\|Ga0184623_10377295	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300018466\|Ga0190268_10707224	Not Available	741	Open in IMG/M
3300018466\|Ga0190268_11321113	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300018481\|Ga0190271_12805635	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300019255\|Ga0184643_1035377	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300021086\|Ga0179596_10626434	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300021406\|Ga0210386_11450448	Not Available	574	Open in IMG/M
3300025910\|Ga0207684_10067434	All Organisms → cellular organisms → Bacteria	3041	Open in IMG/M
3300025910\|Ga0207684_10622626	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300025910\|Ga0207684_11160183	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300025939\|Ga0207665_10810376	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300026041\|Ga0207639_10960229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	800	Open in IMG/M
3300026075\|Ga0207708_10720568	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300027032\|Ga0209877_1003268	Not Available	1290	Open in IMG/M
3300027646\|Ga0209466_1083807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	644	Open in IMG/M
3300027671\|Ga0209588_1153438	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	729	Open in IMG/M
3300027846\|Ga0209180_10422858	Not Available	753	Open in IMG/M
3300027846\|Ga0209180_10553449	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300027873\|Ga0209814_10271624	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300027874\|Ga0209465_10412866	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300027875\|Ga0209283_10512564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	770	Open in IMG/M
3300027875\|Ga0209283_10621955	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300027880\|Ga0209481_10173248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1072	Open in IMG/M
3300027882\|Ga0209590_10084983	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300027882\|Ga0209590_10415325	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300027882\|Ga0209590_10652146	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300027882\|Ga0209590_10731847	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300027882\|Ga0209590_10820637	Not Available	590	Open in IMG/M
3300027907\|Ga0207428_10754303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	693	Open in IMG/M
3300028597\|Ga0247820_10963898	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300029951\|Ga0311371_10956880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1026	Open in IMG/M
3300030829\|Ga0308203_1037833	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300030904\|Ga0308198_1090738	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300031093\|Ga0308197_10347505	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031094\|Ga0308199_1000655	All Organisms → cellular organisms → Bacteria	3243	Open in IMG/M
3300031114\|Ga0308187_10039083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1248	Open in IMG/M
3300031125\|Ga0308182_1002725	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces → unclassified Planctomyces → Planctomyces sp.	1124	Open in IMG/M
3300031682\|Ga0318560_10323379	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300031824\|Ga0307413_10632951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	880	Open in IMG/M
3300031852\|Ga0307410_10833684	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300031901\|Ga0307406_10918027	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031901\|Ga0307406_11395098	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300031995\|Ga0307409_102916593	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300032002\|Ga0307416_100591773	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1188	Open in IMG/M
3300032004\|Ga0307414_12012728	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300032005\|Ga0307411_12108374	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300032013\|Ga0310906_10052902	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300032080\|Ga0326721_10187883	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300032080\|Ga0326721_10746540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	609	Open in IMG/M
3300032180\|Ga0307471_100753776	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300032205\|Ga0307472_101346777	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	690	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.69%
Host-Associated	Host-Associated	21.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.50%
Plants	Host-Associated → Plants	21.31%
Aquatic	Environmental → Aquatic	2.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.19%
Freshwater	Environmental → Aquatic → Freshwater	1.09%
Sediment	Environmental → Aquatic → Sediment	1.09%
Peat	Environmental → Terrestrial → Peat	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.49%
Loam	Environmental → Terrestrial → Soil → Loam	10.38%
Sand	Environmental → Terrestrial → Soil → Sand	3.28%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.09%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.28%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.09%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.09%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	38.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.28%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.09%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.09%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.09%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.09%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.09%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.09%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.55%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.55%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012483	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027032	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031125	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_100122291	3300000858	Soil	MQGTAQFHHEITDARLPQPDPVFHNAAALDAAVDMLNPQPAV
JGI1027J12803_1023455532	3300000955	Soil	MQGTADFHNDIADALLPQPDPIFDDAATLDTAVDMLDPEPAIVQCLVGELLLQQ*
JGI1027J12803_1032975721	3300000955	Soil	MVQGTTACQDEITDALLPQADPVLHDAAALDTAVDMLDPQ
JGI10216J12902_1232822162	3300000956	Soil	MQGTADLHHQIADALLPQPDPVFDKATALHTAVHMLA
C688J18823_108459162	3300001686	Soil	MQGTADFHHDITDALLPQVDPVFDDAATLDTAVDMLDPQSAGVEGLVGSLLRQWQLVVSWSA*
JGIcombinedJ26739_1005033162	3300002245	Forest Soil	MQXTADFHHQITDAPLPQPNPIFDDATALDTTIDMLNSKTAVMQ*
Ga0066398_102236541	3300004268	Tropical Forest Soil	VQGTAQFHHEIADTLLPQAHAVFDDATALDTAVDMLDPEPPLVER
Ga0066395_102985813	3300004633	Tropical Forest Soil	MMQITAEFHHQSADTLLPQAEPVFDNATALHTAVDMLDP*
Ga0066684_108993771	3300005179	Soil	MERTTEFHHEITDAVLPQPEPVFRDAAALDTAVDRLDPQPTLV
Ga0066675_104096872	3300005187	Soil	MQATADFHHEIADTRLPQADPVLHDPTVLDTAVDMLDPQPTLVQ
Ga0065705_101580644	3300005294	Switchgrass Rhizosphere	MQGTADLHHQSADTLLPQADAVFDDATALDTAIDMLDPQP
Ga0065705_104443033	3300005294	Switchgrass Rhizosphere	MQGTADFHNDIADALLPQPDPIFDDAATLDTAVDMLDPEPAIVQCLVGELLLQQ
Ga0070673_1019949302	3300005364	Switchgrass Rhizosphere	MQGTADFHHDITNALFPQADPIFDDATTLDTAVDMLDPQSA
Ga0070708_1022148141	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTTEFHDQIADTLLPQADPVLHDAAALDTAIDVLDAQPTL
Ga0070706_1009784391	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTAEFHHEIAHAVLPQPDPVFDDATTLHATVDMLDPQPT
Ga0070698_1007846542	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTADLHHHIADALLPEADPIFHNATTLHATVDMLDAERVSISD*
Ga0070699_1001516511	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTTDFHHEIADALLPQAEPVFDHAATLDTTVDMLDPQP
Ga0070699_1002032113	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTTEFHHQITDPLFPQADPVFHDATALHTTIDMLDPEPPL
Ga0070693_1014283941	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MVQGTTARQDEITDALLPQADPVFDDATALDTAVDMLDPQSAGVERLVGSLLRR*
Ga0066905_1018006551	3300005713	Tropical Forest Soil	MQGTAEFHHQIADALLPQADPVFHDATALDTAVDMLDPQPT
Ga0075417_102107172	3300006049	Populus Rhizosphere	MQGTADLHHHIADALLPQADPVFDDATALDTAVDRLDP*
Ga0075421_1023392032	3300006845	Populus Rhizosphere	MQGTADFHHDIPDALLPQADPVFDDATALDAAVDMLDPQSAGVERLVGSLL
Ga0075425_1002080892	3300006854	Populus Rhizosphere	MQGTVEFHPEIADTVHPQPDPVFDDTTALDAAVDMLDP*
Ga0075425_1010525243	3300006854	Populus Rhizosphere	MQGAADFHHQIADTRLPQADPVFDDAAALDTAVDMLD
Ga0075425_1021607951	3300006854	Populus Rhizosphere	QGTAQFHHYITDTCFPQADPVFHDATALHATVDMLN*
Ga0075434_1002529871	3300006871	Populus Rhizosphere	MQRTADFHDEIADALLPQTDPVFDDATTFHTAVDMLNPQP
Ga0075419_111781042	3300006969	Populus Rhizosphere	MQGTAEFHHQITNPLLPQAEPVLHNATTLDAAVHMLDPE
Ga0066710_1014804721	3300009012	Grasslands Soil	MQGTADFHHDIADTFLPQAEPIFHDTAALDTAVDMLDPQ
Ga0099829_100457571	3300009038	Vadose Zone Soil	MQGTTDLHDQIADVLFPQADPVFHNATALDTPVDMLNAQSAIVQGL
Ga0099829_101298002	3300009038	Vadose Zone Soil	MQGTADVHHQIADTLLPQAESVFDDATALHTPVDMLDPQPT
Ga0099829_112225741	3300009038	Vadose Zone Soil	MQSTTDLHHQIADALLPQADPVFDDATALDTTIDMLNPQPAVGERLIGPE*
Ga0099829_115355672	3300009038	Vadose Zone Soil	VQGTTEFHHEITDAILPQADPVFDNATTLHAAVDMLDP
Ga0099830_108145132	3300009088	Vadose Zone Soil	VQGTTEFHHEIADALLPQADPVLDDAATLDTPVDMLNPQPTLV
Ga0099828_102175323	3300009089	Vadose Zone Soil	MERTAAFHHESADALLPEADPVFDEATALDTAVDLLDP*
Ga0099828_114672021	3300009089	Vadose Zone Soil	MQGTTECHHEIADAVLPQPDAVFHNAAALDAAIDMLD
Ga0099827_104521112	3300009090	Vadose Zone Soil	MQGTADFHYDIADTLFPQPDPIFHDAATFDTAVHMLDPEPAIV*
Ga0099827_106388671	3300009090	Vadose Zone Soil	MQGTTAFHHQIADTRLPEADSVFDDATALDTAVHVLDSVTGG
Ga0099827_108477651	3300009090	Vadose Zone Soil	TAEFHHQIADALLPQADAVFDNPTVLHTAVDMLDPHRR*
Ga0099827_110308141	3300009090	Vadose Zone Soil	MQGTAQFHHEITDALLPEPDPVFHNATTLHATVDM
Ga0099827_114258031	3300009090	Vadose Zone Soil	MQGTAQFHDEIANAGLPQADAVFDDATTLHAAVDMLDPEPAIV*
Ga0099827_116891692	3300009090	Vadose Zone Soil	MQGTADVHHDITEALLPQTNPVFDKATALDTAVARLAPQPA
Ga0111539_101270343	3300009094	Populus Rhizosphere	MLGTADFHHEIAAAVLPQPHPVFDDPTALDAAVDMLDSAADAD*
Ga0111539_113493281	3300009094	Populus Rhizosphere	MQGTAQFHHELSDTRLPQPNPVFDDPTTLDTAIHMLDA
Ga0111539_119991371	3300009094	Populus Rhizosphere	MQGTAAFHHEIAAPGLPPAAPVFDDAAARDADVDRLAPPPTVV
Ga0105245_132705082	3300009098	Miscanthus Rhizosphere	MVQGTTARQDEITDALLPQADPVFDDATALDTAVDMLDPQSAGVE
Ga0075418_112228921	3300009100	Populus Rhizosphere	MQGAAEFHHQIADALFPQADAVFDNATALDTAGDMRDPQPAAEQFYALAA*
Ga0075418_119416562	3300009100	Populus Rhizosphere	MQCTAEFHHQIAYALVPEADPVFDTATALDTAIDMLNPQPALVQRLVRHVLLQC*
Ga0075418_127075361	3300009100	Populus Rhizosphere	MESTTEFHHEITDALLPQADPVFDDATALHTAVDMLNAQSTIVQGLIGQLL
Ga0075418_127616702	3300009100	Populus Rhizosphere	TTELHDEITNPHFPQADPIFDDATALHTAIDVLDPPSAMV*
Ga0075418_127995921	3300009100	Populus Rhizosphere	RSQPHPDVMQGTATCHHQSTDAVLPQADPVFHNPTALDAAVDMLDS*
Ga0105247_100214218	3300009101	Switchgrass Rhizosphere	MQGTADFHYDIADTLFPQPDPIFHDAATLDTAVNMLDPEPTIV*
Ga0099792_103539622	3300009143	Vadose Zone Soil	MQGTTEFHHQIADARLSQADPVFDDAAALDTALDRLDPQ
Ga0099792_111177211	3300009143	Vadose Zone Soil	VQGTAEFHHQITNARLPQTDPVFDDATAFDATVHMLDAEPALV*
Ga0114129_123588461	3300009147	Populus Rhizosphere	MQGTAELHHQITNALLPQADPVFHQTTALDTAIDMLDPQPTLVQGL
Ga0075423_106811141	3300009162	Populus Rhizosphere	MQGTTDVHHDIADALLPEADPVFDNATALHATIHVL
Ga0105249_115440392	3300009553	Switchgrass Rhizosphere	MVQGTAELHHEIADALLPQADPVLHDATTLDAAVDM
Ga0105070_10064661	3300009815	Groundwater Sand	MQSTADLHHNIPHARLPQPDPVFDDATALDTAEGGRP
Ga0105072_10961632	3300009818	Groundwater Sand	MQGTTDFHYQIADALLPQTDPVFDDATALDAAVDMLNPQPTAVQ
Ga0105085_10788022	3300009820	Groundwater Sand	VQGTAYFHHNITDTLLPQTDPVFDDATTLDTTIDMLDPQPAVVQRLVGHLL
Ga0105064_10382973	3300009821	Groundwater Sand	MQSTADLHHNIPDIRLPQPDPVFDDATALDTAVDMLNAEPTLVQCL
Ga0105068_10119511	3300009836	Groundwater Sand	MQGTADLHHHIADTRLPQAQPVFDNATALDTTVDMLDA
Ga0126384_104966052	3300010046	Tropical Forest Soil	QRATECHHQITDALLPQADTVFHDATAFDTAVDVLDP*
Ga0126382_115309531	3300010047	Tropical Forest Soil	MQSTAEFHDQITDAFFPQADAVFDDATPLDTTIDMLDP
Ga0126370_119699212	3300010358	Tropical Forest Soil	MEGTAEFHHEITDALFPQAEPVFHNATTLDAAVDMLDPEPPLV
Ga0126376_106891533	3300010359	Tropical Forest Soil	VQGAAEFHHESADALFPQADPVFDDTTTLDTAVDMLDPQPAIVQSLVG*
Ga0126376_126133342	3300010359	Tropical Forest Soil	MVQGTAACHHESADALLPQADPVLHHATPFDAAADMLDPQ
Ga0126372_108582323	3300010360	Tropical Forest Soil	VEGTAAFHQQIADARLLQAEPVFHDTTALHTAVDMLDPEP
Ga0126378_132076661	3300010361	Tropical Forest Soil	MQGATEFHHEITDALLPQPHPVFDNTTTLDTTVDMLDPQ
Ga0126377_122785751	3300010362	Tropical Forest Soil	VQGTTEFHHQITDSLLPQADAVFDDATPLDTTIDMLDPQSTL
Ga0134124_120710491	3300010397	Terrestrial Soil	MVQGTTARQDEITDALLPQADPVLHDAAALDTAVDMRDPQ
Ga0126383_127647851	3300010398	Tropical Forest Soil	MQGTAQFHHEITDALLPQTDPVFDNAAALDTTVDM
Ga0134127_131727311	3300010399	Terrestrial Soil	MQGTAAFHHQITDALLPQADAVFHNAIAFDTAVDVLDPSSAIVQ
Ga0105246_119624151	3300011119	Miscanthus Rhizosphere	MQGTADFHHDITDILLPQADAVFDDTATLDAAVDMLDPQSAGVERLVGSLLRR
Ga0137393_110672951	3300011271	Vadose Zone Soil	MQGTTDFHHQIADALLPQADPVFDDATALDTTIDMLNPQPAVGERLIGPE*
Ga0137389_106013451	3300012096	Vadose Zone Soil	MQGTTDFHHQIADALLPQADPVFDDATALDTSIDMLNPQPAVGERLIGPE*
Ga0137389_110517262	3300012096	Vadose Zone Soil	MQGTADFHHQIADALLPQAKPVFDDATTLDTPVDMLDAQPTLVQRLVG
Ga0137389_117032263	3300012096	Vadose Zone Soil	MQGTTDVHHEIADAVLPQAEPVFPNATALDAPVDLLDPQPTVMQGLV
Ga0137319_11162741	3300012167	Soil	VHPEVVQGAAAFHRQIADAFFPEASAVFDNATPLDTAVHVL
Ga0137388_114159951	3300012189	Vadose Zone Soil	MQGTAKFHHEIADAVLPQPDPVFDDAAALDAPVDML
Ga0137383_101137935	3300012199	Vadose Zone Soil	MQRTAQFHHNIPDPLLPQTDPVFDDATPLDTTIDML
Ga0137383_104664181	3300012199	Vadose Zone Soil	MQGTAAFHHEIADALLPQPDPVFDDAAALDAAFDML
Ga0137383_106395812	3300012199	Vadose Zone Soil	MQRPAEFHHEIADALLLQAAPVFDDATAFDPAVDMLDP*
Ga0137383_108047831	3300012199	Vadose Zone Soil	MQRTTDGHHQIANTLLPQADAVFDDATALATPVAMLDS
Ga0137383_108105481	3300012199	Vadose Zone Soil	MQGTADFHHQIADTLLPQADPVFHDATAFDTAVDMLDP*
Ga0137365_104972582	3300012201	Vadose Zone Soil	MERTAEFHHNIPDPFLPEADPVFDNATALDTPVDMLNA*
Ga0137365_105009221	3300012201	Vadose Zone Soil	MQGTTDFHHEIADALLPQAEPVFDNATTLDTAIDMLDPQ
Ga0137374_106840483	3300012204	Vadose Zone Soil	VQGTAQFHHEITDALLPQADPVFHNATALDTAVDMLDPQPTLV
Ga0137380_115449552	3300012206	Vadose Zone Soil	MQGTAEFHHEIADTLLPQAEPVLHNTAALDTAIDVLDAQPT
Ga0137381_101588323	3300012207	Vadose Zone Soil	MQGTAEFHHEIADAVLPQPDPVFDDTAALDAAVDMLDPEPTVVQ
Ga0137381_102955731	3300012207	Vadose Zone Soil	MQGTAQFPHEITDAVLPQPAAVFDDAAAFDAAVDMLDPQPSL
Ga0137379_108504391	3300012209	Vadose Zone Soil	MQGTTECQHEIADAVLPQPDAVFHNAAALDAAIDMLDP*
Ga0137378_109553131	3300012210	Vadose Zone Soil	MQGTADFHHEIADTGLPQADPVFDDTTALDAAVDMLDPQPTVV
Ga0150985_1094586711	3300012212	Avena Fatua Rhizosphere	MQGTADFHHDITNTLLPQADPVFDDATALDTTVDMLDPQSAIVEQ*
Ga0150985_1202163931	3300012212	Avena Fatua Rhizosphere	MQGTADFHHAIPDTLLPQADPVFDDATALDAAVDMLDPQSA
Ga0137387_105843991	3300012349	Vadose Zone Soil	MQGTAEFHHEIADAVLPQPDPVFDDAAALDAAVDMLDPQPTVV
Ga0137367_110532421	3300012353	Vadose Zone Soil	MQGTAEFHHQITNALLPQAEPVLHDAAALDTAVDMLDPQPTVMQGMVG
Ga0137366_104203952	3300012354	Vadose Zone Soil	MQGTAEFHHQIANALLPQTDPVFDDATALDATVDMLDAQPTLVQGAA*
Ga0137371_106910162	3300012356	Vadose Zone Soil	MQGTTEFHHEIADAVLPQPDAVFHNAAALDAAIDMLDP*
Ga0137384_108490371	3300012357	Vadose Zone Soil	MQGTTDFHHEIAYALLPQTDPVFDDATALDTTVHVLDPQPT
Ga0137384_108826551	3300012357	Vadose Zone Soil	MQGTADLHHHIADALLPEADPIFHNATALHATVDMLDAEPTLVQ
Ga0137368_105379363	3300012358	Vadose Zone Soil	MQGTTEFHHDIADAVLPQPNAVFHDAAALDAAVDMLDAESAMVQ
Ga0137385_113475691	3300012359	Vadose Zone Soil	MQGTAAFHHEIADALLPQPDPVFDDAAALDAAVDMLDPQPTV
Ga0137375_106204201	3300012360	Vadose Zone Soil	VEGTTDFHHDIADALLPEADPGFDTATALDTAVDMFD
Ga0137360_100786424	3300012361	Vadose Zone Soil	MQGTTDFHHEIAGAFLLQAKPVFDDATALHTAVHMLDPQPT
Ga0137361_101406172	3300012362	Vadose Zone Soil	MQGTAQFHHDIADALLPQPDPVFDNATALDTAVDMLDP
Ga0137361_108903641	3300012362	Vadose Zone Soil	MQDTAEFHHDIADALLPEADPVFDDPTALHTAVDMLDPEPAVVQCLV
Ga0137361_113890461	3300012362	Vadose Zone Soil	MERTTDFHHEIADALLPQSDPAFDDATALDTTVDMLDPQPTL
Ga0137361_114299511	3300012362	Vadose Zone Soil	VQGTAEFHHQIADILLPQAEPVFDDAATLDTTVATLDPQ
Ga0137390_104277473	3300012363	Vadose Zone Soil	MQGTTEFHHEIADAILPQPDPVFHDAAALDAAVDM
Ga0150984_1121969691	3300012469	Avena Fatua Rhizosphere	MQGTADFHHDISNALLPQADPVFDDATALDAAVDMLDPQSAGVERLVG
Ga0150984_1162518192	3300012469	Avena Fatua Rhizosphere	MQGTADFHHDITDALLPQADFDDATALDTAVDMLDPQSAVVERLVDSLLCQWQLVVSWSA
Ga0157337_10020161	3300012483	Arabidopsis Rhizosphere	GTAEFHHQIADACLPQADAVVHDAATLDTTIDMLNP*
Ga0137373_109751491	3300012532	Vadose Zone Soil	VQGTAAFHHQITDPLLPQADPVLHYAAALDAPVDRLDPQPTL
Ga0157306_103896733	3300012912	Soil	MQGTTDFHHDIPDALFPQADPVFDDTATLDAAVDMLDPQ
Ga0157297_104172533	3300012914	Soil	MQGTADFHYDIPDALLPQADAVFDDTATLDAAVDMLDPRAA
Ga0137396_104236413	3300012918	Vadose Zone Soil	MQGAAEFHHDITDTLLPQTEAVFDNATTLHAAVDMLDP*
Ga0137404_109971092	3300012929	Vadose Zone Soil	MQGTADFHHDIADTFLPQAEPIFHDTAALDTAVDMLDPQPTLV*
Ga0137407_109195432	3300012930	Vadose Zone Soil	MQGTAEFHHEIADTVLPQPDPVFDDAAALDAAVDM
Ga0137410_101027723	3300012944	Vadose Zone Soil	MQGTVDFYHDIADTLLPQTDPVFDDTTALHAAVDMLDPQPAIVAQI*
Ga0137410_103604771	3300012944	Vadose Zone Soil	MQGTAQFHHEIADAVLPQPDPVFDDAAALDATVDM
Ga0126375_102314901	3300012948	Tropical Forest Soil	MERTTEFHHEIADTLLPQADPVFDDATALHTAVDMLNA
Ga0164307_101111501	3300012987	Soil	MQGTADFHHDITDALLPQADPVFDDATTLDTAVDMLDPQSAIVEHL
Ga0137405_13303221	3300015053	Vadose Zone Soil	VQGTAAFHHQITDARLPQADPVFHDATALHTTIDMLDPDIS
Ga0137405_13970295	3300015053	Vadose Zone Soil	MQGTTDFHHQIANTLLPQADPVFDDATALHTAVDMLDP*
Ga0137409_102432133	3300015245	Vadose Zone Soil	FYHDIADTLLPQTDPVFDDTTALHAAVDMLDPQPAIVAQI*
Ga0137409_108602693	3300015245	Vadose Zone Soil	MQGAAEFHHDITDTLLPQTDAVFDNATTLHAAVDML
Ga0137403_114080761	3300015264	Vadose Zone Soil	MMQSTTDGHHQTANTLLPQADAVFDEATARDTPVDMLDPPPAV*
Ga0134089_103510992	3300015358	Grasslands Soil	VQGATYFHHQIADALLPQANPVFDDATTLDTAVDMLDPQP
Ga0182032_105664262	3300016357	Soil	MWGTADLHHQVTDTLLPQANAVFDDPTAFDDTVDMLDLQPTLVELLV
Ga0187853_104234062	3300017940	Peatland	MQCAADFHHQISDALLPQPNPIFDDATALDTTIDMLNPKTA
Ga0184623_103772951	3300018056	Groundwater Sediment	MERPAEFHHEIADTCLPQADPVFDDATALDTAVDVLDP
Ga0190268_107072242	3300018466	Soil	MQGTAEFHHQITDALLPQAYPVLHDAAALDAAVDVL
Ga0190268_113211132	3300018466	Soil	VQGTAEFHEQIADALFPQPEAIFDDAAALDTAIDVLD
Ga0190271_128056352	3300018481	Soil	MQGTADFHHDIADALLPQADPVFDDAATLDAAVDMLDPQPAGVERLAGSLLRR
Ga0184643_10353771	3300019255	Groundwater Sediment	MQGTAEFHDQIADTLLPQADPVFHDATALDATVDML
Ga0179596_106264341	3300021086	Vadose Zone Soil	MVQGTAELPHEIADARLPQADPVFDDATALHTAVDMLDPQPTLVERQV
Ga0210386_114504481	3300021406	Soil	MQSTADFHHQITDAPLPQPNPIFDDATALDTTIDMLNAKTAVMQ
Ga0207684_100674343	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTAEFHHDIADALLPQADPVFDDATALHTTVDMLDP
Ga0207684_106226261	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KVMERTAEFHHEIADALLPEADPVFDDATALDTAVHMLDP
Ga0207684_111601832	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTAEFHHEITDALLPQADPVFDDATALHTAVDVLDP
Ga0207646_116684061	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTADLHHHIADALLPEADPIFHNATTLHATVDMLDAERVSISD
Ga0207665_108103762	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MEDVQGTAECQHDITDSLFPQMEPVFDDAAALDTTVDMLDA
Ga0207639_109602292	3300026041	Corn Rhizosphere	MQGTTEFHHEIADAVLPQPDPVFHDTAALDTAVDMLIRS
Ga0207708_107205682	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTADFHYDIADTLFPQPEPIFHDAATLDTAVNMLDPEPTIV
Ga0209877_10032683	3300027032	Groundwater Sand	MQGTTEFHHKIADAFLPQPDPVLHDAAALDAAVDMLDPQ
Ga0209466_10838071	3300027646	Tropical Forest Soil	MQRAADFHHQIADARLPQAAGIVDDATALDTAVDMLDA
Ga0209588_11534383	3300027671	Vadose Zone Soil	MQGTADFHHDIADTFLPQAEPIFHDTAALDTAVDMLDPQP
Ga0209180_104228582	3300027846	Vadose Zone Soil	MQGTTEFHHQIADARLPQADPVFDDAAALDTALDRLDP
Ga0209180_105534492	3300027846	Vadose Zone Soil	MQGTAEFHHQIADARLPQADPVFHDATALDTAVDMLDP
Ga0209814_102716242	3300027873	Populus Rhizosphere	MQGTADLHHHIADALLPQADPVFDDATALDTAVDRLDP
Ga0209465_104128662	3300027874	Tropical Forest Soil	MMQITAEFHHQSADTLLPQAEPVFDNATALHTAVDMLDP
Ga0209283_105125641	3300027875	Vadose Zone Soil	MQSTTDFHHEITDTLLPQPDPVFDDATALDTTVDMLDP
Ga0209283_106219551	3300027875	Vadose Zone Soil	MQGTAEFHHQIADTLLPQADPVFDDAATLDTTVDM
Ga0209481_101732482	3300027880	Populus Rhizosphere	MWGTTDFHHQITDARLPQTDSVFHDAAALDTTVDMLDPQPTLV
Ga0209590_100849831	3300027882	Vadose Zone Soil	MQGTAEFHHEIADAVLPQPDPVFDDAAALDATVDML
Ga0209590_104153252	3300027882	Vadose Zone Soil	MQRTADFHHEIADALLPQTDPVFDDATTLHTAVHMLDP
Ga0209590_106521461	3300027882	Vadose Zone Soil	MQGTAQFHHEITDALLPEPDPVFHNATTLHATVDMLD
Ga0209590_107318472	3300027882	Vadose Zone Soil	VQGTTEFHHQIADALLPEAKAVFDDATALDTTINMLDAQPSVVQRL
Ga0209590_108206372	3300027882	Vadose Zone Soil	MQGTTDFHHQITDARLPQADPVFHDATALHTTVDMLD
Ga0207428_107543032	3300027907	Populus Rhizosphere	MLGTADFHHEIAAAVLPQPHPVFDDPTALDAAVDMLDSAADAD
Ga0247820_109638981	3300028597	Soil	MQRTADFHYDITDTLLPQADAVFDDATALDTAVDMLDPQSARVERLVGSLLRR
Ga0311371_109568803	3300029951	Palsa	MKSTAEFHHQIADALPPQADTVFDDPTTFDTTVDMFDPQPAVMQRPD
Ga0308203_10378331	3300030829	Soil	MQGTTEFHHEIADAVLPQPDPVFDDTAALDAAVDMLDP
Ga0308198_10907381	3300030904	Soil	MQGTAEFHHQITDALFPQAHPVFDDATALDTAVDVLDA
Ga0308197_103475052	3300031093	Soil	MQGTTKFHHEIADAVLPQPDPVFHDAAALDAAVHMLDP
Ga0308199_10006554	3300031094	Soil	MQGTAEFHHQITDALFPQAHPVFDDATALDTAVDVLD
Ga0308187_100390831	3300031114	Soil	MQGTADFHHEIADTFLPQTDPIFNDATALDTTVGMLDPKPMLVQRLV
Ga0308182_10027253	3300031125	Soil	MELTAEFHHEIADALLPQANPVFDDAAALDTTVDMLDPQ
Ga0318560_103233793	3300031682	Soil	QRVMQGTAEFHHEIADPLLPQADTVFDDAAALDVE
Ga0307413_106329511	3300031824	Rhizosphere	MQGTADFHHDITDTLLPQADPVFDDATTLDAAVDMLDPQSAGMERLVGSLLRQW
Ga0307410_108336842	3300031852	Rhizosphere	MQGTADFHHDIADALLPQADPVLDDATALDTAVDMLDPQPAG
Ga0306919_106847852	3300031879	Soil	MQGTAELHREIADALLPQADPVFHHATTEDVSEVL
Ga0307406_109180273	3300031901	Rhizosphere	HHAITDALLPQADPVFDDATALDTAVDRLDPQSAGVERLVGSLLRP
Ga0307406_113950981	3300031901	Rhizosphere	MQGTAEFHHQIADARLPQADPVFHNAAALDTAVDML
Ga0307409_1029165932	3300031995	Rhizosphere	MQGTADFHHDIPDALLPQADPVLDDATALDTAVDMLDPQSARVER
Ga0307416_1005917731	3300032002	Rhizosphere	MQGTAEFHHQIADARHPQAEPVCDDTTALATPVDRLDPQPAVREGLI
Ga0307414_120127281	3300032004	Rhizosphere	MQGTADFHHDITDTLLPQVDPVFDDATALDAAVDVLDPQSAGVERLGGSLL
Ga0307411_121083741	3300032005	Rhizosphere	MQGTADFHYDIPDALLPQADPVFDDATALDTAVDRLD
Ga0310906_100529021	3300032013	Soil	MQGAAEFHHQIADALFPQADAVFDNATALDTAGDMRDPQPAAEQFY
Ga0326721_101878831	3300032080	Soil	MQGTADFHHAITDAPLPQADPVFDDATALDAAVDMLDPQSAGVERLVGS
Ga0326721_107465401	3300032080	Soil	MQGTADFHHDIPDALLPQADPVLDDAATLDTAVDMLDP
Ga0307471_1007537763	3300032180	Hardwood Forest Soil	MEGTAEFHYQIADALLPQANPVFHDATTLDTAVDVLDP
Ga0307472_1013467772	3300032205	Hardwood Forest Soil	HPEVVQGTTEFHHEITDAVLPQSDPVFDDTTALHAAIDMLDA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031018

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences