NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F030857

Metagenome / Metatranscriptome Family F030857

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F030857
Family Type Metagenome / Metatranscriptome
Number of Sequences 184
Average Sequence Length 50 residues
Representative Sequence FQKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Number of Associated Samples 120
Number of Associated Scaffolds 184

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 6.52 %
% of genes from short scaffolds (< 2000 bps) 5.43 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (94.022 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(33.152 % of family members)
Environment Ontology (ENVO) Unclassified
(59.239 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.891 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86
1GPIPI_00677160
2AF_2010_repII_A1DRAFT_100121721
3AF_2010_repII_A100DRAFT_10066901
4JGI1027J12803_1005143592
5JGI10216J12902_1049489753
6JGI12627J18819_102227012
7Ga0062589_1002797511
8Ga0062595_1019229991
9Ga0066678_101516203
10Ga0066388_1005045531
11Ga0066388_1010169333
12Ga0066388_1022532611
13Ga0066388_1024224911
14Ga0066388_1032920363
15Ga0066388_1039274101
16Ga0070666_108052971
17Ga0008090_157139952
18Ga0070699_1015025752
19Ga0070697_1007418112
20Ga0066695_104043111
21Ga0066707_102596422
22Ga0066703_107068141
23Ga0068864_1000713751
24Ga0066905_1007235792
25Ga0066903_1004765475
26Ga0066903_1014506711
27Ga0066903_1028532733
28Ga0066903_1031722593
29Ga0066903_1043113091
30Ga0066903_1051062722
31Ga0066903_1057376282
32Ga0066903_1081041131
33Ga0066903_1085253601
34Ga0066903_1088843961
35Ga0075018_107863121
36Ga0070712_1002442331
37Ga0074062_127657841
38Ga0075433_115372981
39Ga0075423_102790824
40Ga0126382_124743931
41Ga0105246_102083761
42Ga0137365_107472982
43Ga0137362_105946181
44Ga0137362_112019001
45Ga0137373_110558822
46Ga0137359_106809251
47Ga0164299_104710723
48Ga0126369_103225611
49Ga0164307_106534141
50Ga0164305_110156612
51Ga0132258_133286911
52Ga0132255_1035663651
53Ga0182036_110188112
54Ga0182036_110771671
55Ga0182036_110867102
56Ga0182036_114765431
57Ga0182041_103111151
58Ga0182041_104693502
59Ga0182041_109406992
60Ga0182041_111655932
61Ga0182033_103286221
62Ga0182033_107491112
63Ga0182033_109055892
64Ga0182033_109387251
65Ga0182033_115983971
66Ga0182035_102939261
67Ga0182035_103489481
68Ga0182035_111637902
69Ga0182035_112654371
70Ga0182032_100760805
71Ga0182034_100880424
72Ga0182034_108948641
73Ga0182040_106062461
74Ga0182039_100908821
75Ga0182039_101634771
76Ga0182039_103261813
77Ga0182039_115706051
78Ga0182038_107534652
79Ga0182038_109761242
80Ga0184624_103771212
81Ga0066667_122701211
82Ga0173482_102323191
83Ga0210403_107345662
84Ga0210381_102730002
85Ga0210404_101047702
86Ga0210406_104548843
87Ga0126371_117080271
88Ga0207685_102860271
89Ga0207684_114507092
90Ga0207693_102265264
91Ga0207693_111075921
92Ga0207646_101173016
93Ga0207674_122442202
94Ga0209154_12747672
95Ga0209058_13534061
96Ga0179587_108850242
97Ga0207839_10327001
98Ga0209622_10435421
99Ga0307288_100704313
100Ga0307282_106285352
101Ga0307314_100461742
102Ga0307289_101331353
103Ga0318541_104639623
104Ga0318528_105113561
105Ga0318528_107863011
106Ga0318573_102202353
107Ga0318515_106861542
108Ga0310915_101080971
109Ga0310915_101910761
110Ga0310915_109672901
111Ga0318555_107470462
112Ga0318542_103238361
113Ga0318542_106601101
114Ga0318560_102314643
115Ga0318560_102368141
116Ga0306917_100281108
117Ga0306917_100895011
118Ga0306917_102164234
119Ga0306917_105030733
120Ga0306917_108747221
121Ga0306917_113063241
122Ga0318493_104263171
123Ga0306918_108355691
124Ga0306918_111801211
125Ga0318554_105108782
126Ga0318509_101123363
127Ga0318509_104567792
128Ga0318546_112878262
129Ga0318498_102470251
130Ga0318508_10338362
131Ga0318547_101491111
132Ga0318552_100584434
133Ga0318503_100988463
134Ga0318568_100392651
135Ga0318567_103228652
136Ga0318567_106409683
137Ga0318499_100747521
138Ga0318499_101109841
139Ga0310917_100063751
140Ga0310917_100988641
141Ga0318495_101393191
142Ga0306919_100746851
143Ga0306925_104869781
144Ga0306925_116813811
145Ga0318536_107068513
146Ga0318522_102062722
147Ga0318551_103968222
148Ga0318520_109598072
149Ga0306923_102401744
150Ga0306921_100093791
151Ga0306921_104164311
152Ga0306921_105395401
153Ga0310912_102274904
154Ga0310912_111313141
155Ga0310916_100081291
156Ga0310916_100098291
157Ga0310916_104109462
158Ga0310913_100006811
159Ga0310913_109161891
160Ga0310910_100234158
161Ga0310910_114030842
162Ga0310909_109153651
163Ga0310909_110022451
164Ga0306926_110849691
165Ga0306926_124724671
166Ga0318531_104403761
167Ga0306922_100028761
168Ga0306922_109032003
169Ga0306922_118271831
170Ga0318569_105890102
171Ga0310911_107893361
172Ga0318558_102564892
173Ga0318506_100780071
174Ga0318504_100669641
175Ga0318514_103639521
176Ga0318514_106969261
177Ga0318524_102852481
178Ga0306924_100026881
179Ga0306924_119592801
180Ga0318525_105941892
181Ga0318540_106403221
182Ga0306920_1022457481
183Ga0306920_1026937681
184Ga0310914_108962241
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.79%    β-sheet: 0.00%    Coil/Unstructured: 59.21%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045FQKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAHSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
6.0%94.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Groundwater Sediment
Watersheds
Soil
Soil
Vadose Zone Soil
Tropical Forest Soil
Soil
Soil
Grasslands Soil
Soil
Forest Soil
Soil
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Tropical Rainforest Soil
4.3%3.3%4.9%33.2%27.7%9.8%4.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_006771602088090014SoilDYQFEKQVKRAQECRQLQDKLVGXXXXXXXXXEEIAKTMSRNGCTARFHDQ
AF_2010_repII_A1DRAFT_1001217213300000597Forest SoilCESSRSQDYQFQKQVERAQECRQLQDKLIGEQPLTSERGEEIGNMLKVAGCTAKLPAH*
AF_2010_repII_A100DRAFT_100669013300000655Forest SoilNLVGCESSRSQDYQFEKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRSGCTARLPAH*
JGI1027J12803_10051435923300000955SoilQLQDKLVGDQPLTPERRGEIAKTMGRTGCTARFHDQ*
JGI10216J12902_10494897533300000956SoilDLQFQKQVKGAQECRQLQDNLVRDQPLTPERRKEIVKTMNGNGCTAGEAVDPR*
JGI12627J18819_1022270123300001867Forest SoilIGCESSRDSPDRQFQKQVKRAQECRELQDKLVGNQPLTAERAEEITKTMDRTGCTAQLPAH*
Ga0062589_10027975113300004156SoilDLQFQKQVKRAQECRQLQDNLVRDQPLTPERRKEIVKTMNGNGCTAGEAVDPR*
Ga0062595_10192299913300004479SoilQVKRAQECRQLQDKLVGDQPLTPERREEIAKTMEGNGCTAQLP*
Ga0066678_1015162033300005181SoilRDSPDRQFQKQVKRAQECRELQDKLVGDQPLTAERAEELTKTMDRTGCTARLPAH*
Ga0066388_10050455313300005332Tropical Forest SoilAQECRQLQDKLVGDQPLTPERGEEIAKTMSRTGCTARFHGQ*
Ga0066388_10101693333300005332Tropical Forest SoilVRVQGVRDLQFQKQVKRAQECRKLQDKLVGNQPLGPERREEIAKTLEGNGCTARLP*
Ga0066388_10225326113300005332Tropical Forest SoilGCESSRSQDYQFEKQVKRAQECRHLQDKLIGDQAVTPQRSEEIAHTMAGAGCTARLPSS*
Ga0066388_10242249113300005332Tropical Forest SoilGCESSRDSPDRQFQKQVKRAQECRELQDKLVGDQPVTPERAEEITKTMDRTGCTAQLPAH
Ga0066388_10329203633300005332Tropical Forest SoilIGCESSRDSPDPQFQKQVKRAQECRQLQDKLVGDQPLTPARAEEIAKTMDRSGCTARLPAH*
Ga0066388_10392741013300005332Tropical Forest SoilGCESSRSQDYQFEKQVKRAQECRHLQDKLIGDQAVTPQRNEEIAHTMAGAGCTARLPSS*
Ga0070666_1080529713300005335Switchgrass RhizosphereNPQFEKQVQRAQECRQIQAKLVGDHPVTPERAEEIAKTMTPTGCAARLPGYY*
Ga0008090_1571399523300005363Tropical Rainforest SoilECRQLQDKLIGEQPLTPERGEEIGNTLKVAGCTAKLPAH*
Ga0070699_10150257523300005518Corn, Switchgrass And Miscanthus RhizospherePDRQFQKQVKRAQECRELQDKLVGNQPLTAERAEEITKTMDRTGCTAQLPAH*
Ga0070697_10074181123300005536Corn, Switchgrass And Miscanthus RhizospherePDRQFQKQVKRAQECRELQDKLVGNQPLTAERAEEITKTMDRTGCTTQLPAH*
Ga0066695_1040431113300005553SoilLSNLIGCESSRSPDPQFQKQVMRAQECRQLQDKLVGDQPLTPERAEEMAKTMDRSGCTARLPAH*
Ga0066707_1025964223300005556SoilPNLIGCESSRDSPDRQFQKQVKRAQECRELQDKLVGDRLLTAERAEEITKTMDRTGCTARLPAH*
Ga0066703_1070681413300005568SoilQECRELQDKLVGDRLLTAERAEEITKTMDRTGCTAQLPAH*
Ga0068864_10007137513300005618Switchgrass RhizosphereAQECRQIQAKLVGDHPVTPERAEEIAKTMTPTGCAARLPGYY*
Ga0066905_10072357923300005713Tropical Forest SoilRGQDYQFEKQVKRAQECRQLQDKLVGDQPLTPERGEEIAKTMDRSGCTARLPAH*
Ga0066903_10047654753300005764Tropical Forest SoilMPNLVGCESSRSQDYQFEKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRSGCTARLLAH*
Ga0066903_10145067113300005764Tropical Forest SoilAQECRQLQDKLVGDQPLTPERGEEIAKTMSRTGCTARFHDQ*
Ga0066903_10285327333300005764Tropical Forest SoilQFQKQVKRAQECRQLQDKLVGDQPITPERAEEIAKTMDRAGCTARLPTH*
Ga0066903_10317225933300005764Tropical Forest SoilKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTARLPAH*
Ga0066903_10431130913300005764Tropical Forest SoilQLQDKLVGDQPLTPERAEEIAKTMDRSGCTARLPAH*
Ga0066903_10510627223300005764Tropical Forest SoilRHLQDKLIGDQAVTPQRGEEIAHTMAGAGCTARLPSS*
Ga0066903_10573762823300005764Tropical Forest SoilDRQFQKQVKRAEECRQLQDKLVGDKPLTPERTEEIAKTMDQSGCTARFPAH*
Ga0066903_10810411313300005764Tropical Forest SoilSQSHDYQFEKQVKRAQECRQLQDKLIGDQPLTPERGEEIADTLKVAGCTASLPVR*
Ga0066903_10852536013300005764Tropical Forest SoilNLIGCESSRDSPDRQFQKQVKRAQECHELQDKLVGDQPLTPERVEEITKTMDRTGCTAQLPAH*
Ga0066903_10888439613300005764Tropical Forest SoilTLVGCESSRSQEDYQFQKQVTRAQECRQLQDKLVGDRPLTSERREEIVNTMEGTGCTARLP*
Ga0075018_1078631213300006172WatershedsQKQVMRAQECRQLQDKLVGDQPLTPERGEEIAETMNRTGCTARLPIR*
Ga0070712_10024423313300006175Corn, Switchgrass And Miscanthus RhizosphereNSRSQDYQFEKQAKRAQECRQLQDKLVRDQPLTPERGEEIAKTMRRTGCTARLPDQ*
Ga0074062_1276578413300006606SoilRAQECRQLQDKLVGDQPLTPERAEEITKTMDRTGCTARLPAH*
Ga0075433_1153729813300006852Populus RhizosphereLQDKLVGDQPLTPERAEEITKTMDRTGCTARLPAH*
Ga0075423_1027908243300009162Populus RhizosphereQECRQFQEKLVGDQPLTPERSEKIANAMEAAGCTARFPSAVAGSQ*
Ga0126382_1247439313300010047Tropical Forest SoilYQFEKQVKRAQECRQLQDKLVGDQPLTREGGEEIAMAGAGCTA*
Ga0105246_1020837613300011119Miscanthus RhizosphereKQVKRAQECQQLQDKLVGNQPLTPERRKEITNTLSRNGCTARLP*
Ga0137365_1074729823300012201Vadose Zone SoilRSQDYQFEKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRSGCTARLPAR*
Ga0137362_1059461813300012205Vadose Zone SoilDPQFQKQVMRAQECRQLQDKLVGDQPLTPERGEEIAETMNRTGCTARLPVR*
Ga0137362_1120190013300012205Vadose Zone SoilMRAQACRQLQDKLVGDQPLTPERGQEIAKTMDQSGCAARLPAY*
Ga0137373_1105588223300012532Vadose Zone SoilGCESLRSPEPQFQKQVMRAQECRQLQDKLVGDQPLTPERGEEIAETMNRTGCTARLPVR*
Ga0137359_1068092513300012923Vadose Zone SoilKRAQECRELQDKLVGDQPLTPERAEEITKTMDRTGCTARLPAY*
Ga0164299_1047107233300012958SoilRQIQAKLVGDQPVTPERAEEIAKTMTPTGCAARLPGYY*
Ga0126369_1032256113300012971Tropical Forest SoilQVKRAQECRQLQDKLIGDQPLTPERGEEIANTLKVSGCNASPPVR*
Ga0164307_1065341413300012987SoilMPHLLGCGSSGSQDYQFEKQVRRAQECRQFQEKLVGDQPLTPRRSEKIANAMEAAGCT
Ga0164305_1101566123300012989SoilQRAQECRQLQDKLVGDQPLTPERAAEITKAMNPTGCAARLPGYY*
Ga0132258_1332869113300015371Arabidopsis RhizosphereQVQRAQECRALQDKLVGDQPITPERAKEITASMNPAGCAARLPGYY*
Ga0132255_10356636513300015374Arabidopsis RhizosphereLQAKLVGNQPVTPERAEEIAKTMTPTGCAARLPGYY*
Ga0182036_1101881123300016270SoilQFQKQVKRAQECRQLQDKLVGDQPLTPERGEEITNTMKGAGCTARLP
Ga0182036_1107716713300016270SoilYQFEKQVKRAQECRQLQDKLVGDQPLTPERGEEIAKTMNRSGCTARLPAH
Ga0182036_1108671023300016270SoilCRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0182036_1147654313300016270SoilNLIGCESSRSQDYQFQKQVKRAQECRQLQDKLIGDQPLTPERGEEITNILKVAGCTARLSVH
Ga0182041_1031111513300016294SoilSSRDSPDRQFQKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0182041_1046935023300016294SoilAQECRQLQDKLVGDQPLTPERREEIVNTMEGTGCTARLP
Ga0182041_1094069923300016294SoilIGCESSRDSPDRQFQKQVKRAQECRQLQDKLVGDQPPTPERAEETAKTMDRAGCTARLPA
Ga0182041_1116559323300016294SoilESSLGQDYQFQKQVKRAQECRQLQDKLVGDQPLTPERREEIANTMEGTGCTARLP
Ga0182033_1032862213300016319SoilPDRQFQKQVKRAQECRQLQDKLVGDQPLTPERAEETAKTMDRAGCTARLPAH
Ga0182033_1074911123300016319SoilATPNLIGCESSRDSPDRQFQKQLKRAEECRQLQDKLVGDQPLTPERAEEIAKSMDRAGCTARLPDH
Ga0182033_1090558923300016319SoilESSRDSPDRQFQKQVKRAQECRELQDKLVGDQPLTPERAEEITKTMDRTGCIARLPAH
Ga0182033_1093872513300016319SoilFEKQVKRAQECRQLQDKLVGEQPLTPERREEIANTMNGFECTARLP
Ga0182033_1159839713300016319SoilQVKRAQECRQLQDKLIGEQPLTPERGEEIANTLKVAGCTARLPGQ
Ga0182035_1029392613300016341SoilSSRDSPDRQFQKQVKRAQECRQLQDKLVGDQPLTPERAEETAKTMDRAGCTAWLPAH
Ga0182035_1034894813300016341SoilRDSPDRQFQKQVKRAQECRELQDKLVGDQPLTPERAEEITKTMDRTGCIARLPAH
Ga0182035_1116379023300016341SoilGCESSLGQDYQFQKQVKRAQECRQLQDKLVGDQPLTPERGEEITNTMKGAGCTARLP
Ga0182035_1126543713300016341SoilQECRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSARFHDQ
Ga0182032_1007608053300016357SoilQKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0182034_1008804243300016371SoilQGYQFEKQVRRAQECRQLQDKLVGDQTLTPERGEGIANTMSGFGCTARLP
Ga0182034_1089486413300016371SoilDSPDRQFQKQVKRAQECRELQDKLVGDRLITAERAEEITKTMDRTGCTARLPAH
Ga0182040_1060624613300016387SoilRDSADRQFQKQLKRAEECRQLQDKLVGDQPLTPERAEEIAKSMDRAGCTARLPDH
Ga0182039_1009088213300016422SoilSLAGCESSQGQDYQFQKQVQRAQECRRLQDKLVGDQPLTPERGEEITNTMKGAGCTARLP
Ga0182039_1016347713300016422SoilQFQKQVQRAQECRQLQDKLVGDQPLTPERREEIVNTMEGTGCTARLP
Ga0182039_1032618133300016422SoilDRQFQKQVKRAQECRQLQDKLVGDQPLTPERAEETAKTMDRAGCTAWLPAH
Ga0182039_1157060513300016422SoilQVKRAQECRQLQDKLIGDQPLTPERGEEIAKTMNRSGCTARLPAH
Ga0182038_1075346523300016445SoilDRQFQKQLKRAEECRQLQDKLVGDQPLTPERAEEIAKSMDRAGCTARLPDH
Ga0182038_1097612423300016445SoilQFEKQVKRAQECRELQDKLVGDQPLTPERADEITKTMDRTGCTARLPAH
Ga0184624_1037712123300018073Groundwater SedimentQECRQLQAKLVGDQPLTPERAAEITKAMNPTGCAARLPGYY
Ga0066667_1227012113300018433Grasslands SoilTLNLIGCESSRDSPDRQFQKQVKRAQECRELQDKLVGDQPLTAERAEEITKTMDRTGCTARLPAH
Ga0173482_1023231913300019361SoilSSSGSEDLQFQKQVKRAQECRQLQDNLVRDQPLTPERRKEIVKTMNGNGCTAGEAVDPR
Ga0210403_1073456623300020580SoilSARSQDYQFDKQVKRAQECRQLQDKLVGDQPLTPERGEEIAKITGRNGCSARFHDQ
Ga0210381_1027300023300021078Groundwater SedimentKRAQECRQLQDKLVGDQPLTPERGEEIAKTMGRTGCTARFPVL
Ga0210404_1010477023300021088SoilQDYQFEKQVKRAQECRELQDKLVGDQPLTPERADEITKTMDRTGCTARLPAH
Ga0210406_1045488433300021168SoilIGCESSRDSPDRQFQKQVKRARECRELQDKLVGDQPLTPERAEEITKTMDRTGCTARLPA
Ga0126371_1170802713300021560Tropical Forest SoilSQDYQFEKQVKRAQECRQLQDKLVGDQPLTPERGEEIAKTMGRAGCIARFHDH
Ga0207685_1028602713300025905Corn, Switchgrass And Miscanthus RhizosphereMQDKLVGDQPLTPERGEEIAKIMGRNGCSARFHDQ
Ga0207684_1145070923300025910Corn, Switchgrass And Miscanthus RhizosphereCESSRDSPDRQFQKQVKRAQECRELQDKLVGDQPLTAERAEEITKTMDRTGCTARLPAH
Ga0207693_1022652643300025915Corn, Switchgrass And Miscanthus RhizosphereRAQECRQLQDKLVGDQPLTPERGEEIAKTMGRNGCTARFHDQ
Ga0207693_1110759213300025915Corn, Switchgrass And Miscanthus RhizosphereQVKRAQECRQLQDKLVGDQPLTPERSEEIAKTMSRNGCTARFHDQ
Ga0207646_1011730163300025922Corn, Switchgrass And Miscanthus RhizosphereKQVKRAQECRELQDKLVGDQPLTPERAEEITKTMDRTGCTARLPAH
Ga0207674_1224422023300026116Corn RhizosphereLQFQKQVKRAQECRQLQDTLIRDQPLTPERREEIVKTMNGNGCTPGEAVDPR
Ga0209154_127476723300026317SoilGCESSRSEDYQFEKQVKRAQECRQLQDKLVGDQPLTPERGEEIAKTMGRNVCPVPRPVML
Ga0209058_135340613300026536SoilCRQLQDKLVGDQPLTPERAEEMAKTMDRSGCTARLPAH
Ga0179587_1088502423300026557Vadose Zone SoilMKVGCESSWSQDHQFEKQVKRAQECRQLQDKLVGDQPLAPERGEEVAKTMGRTGCTARFHDQ
Ga0207839_103270013300027010Tropical Forest SoilCESSRSQDYQFDKQVKRAQECRQLQDKLVGDQPLTPERGEEITNTMKGFGCTARLP
Ga0209622_104354213300027502Forest SoilPNVIGCESSRDSPDRQFQKQVKRAQECRELQDKLVGDQPLTPERADEITKTMDRTGCTARLPAH
Ga0307288_1007043133300028778SoilQVKRVQECRQLQDKLVGDQPLTPERGEEIAKTMGRTGCTARFPVL
Ga0307282_1062853523300028784SoilQDYQFEKQVKRAQECRQLQDKLVGDQPLTPERGEEIAKTMGRTGCTARFPAL
Ga0307314_1004617423300028872SoilPNLVGCESARSQDYQFEKQVKRAQECRQLQDKLVGDQPLTPERGEEIAKTMGRTGCTARFPAL
Ga0307289_1013313533300028875SoilVKRVQECRQLQDKLVGDQPLTPERGEEIAKTMGRTGCTARFPVL
Ga0318541_1046396233300031545SoilAQECRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSARFHDQ
Ga0318528_1051135613300031561SoilRAEECRQLQDKLVGDQPLTPERAEEIAKTMDRSGCTARLPAH
Ga0318528_1078630113300031561SoilAQECRQLQDKLIGDQPLTPERGEEITNILKVAGCTARLSVH
Ga0318573_1022023533300031564SoilSQDYQFEKQVKRAQKCRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSTRFHDQ
Ga0318515_1068615423300031572SoilFQKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0310915_1010809713300031573SoilKQVKRAQECRQLQDKLVGDQPLTPERAEETAKTMDRAGCTARLPAH
Ga0310915_1019107613300031573SoilKRAQECRQLQDKLIGDQPLTPERGEEITNILKVAGCTARLSVH
Ga0310915_1096729013300031573SoilSQEDYQFQKQVKRAQECRQLQDKLVGDQPLTPERREEIANTMEGTGCSARLP
Ga0318555_1074704623300031640SoilDYQFEKQVKRAQECRQLQGKLVGEQPLTPERREEIANTMNGFGCTARLP
Ga0318542_1032383613300031668SoilVKRAQECRELQDKLVGDQPLTPERGEEIAKTMGRNGCSARFHDQ
Ga0318542_1066011013300031668SoilSRDSPDRQFQKQLKRAEECRQLQDKLVGDQPLTPERAEEIAKSMDRAGCTARLPDH
Ga0318560_1023146433300031682SoilRVRDDLCLACRHADLVGCESSRSQEDYQFQKQVTRAQECRQLQDKLVGDQPLTPERREEIVNTMEGTGCTARLP
Ga0318560_1023681413300031682SoilPDRQFQKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0306917_1002811083300031719SoilKQVQRAQECRQLQDKLVGDQPLTPERREEIVNTMEGTGCTARLP
Ga0306917_1008950113300031719SoilNLIGCESSRSEDYQFQKQVKRAQECRELQDKLVGDQPLTPERGEEIATIMDRSGCSAQLSTN
Ga0306917_1021642343300031719SoilRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSTRFHDQ
Ga0306917_1050307333300031719SoilQFEKQVKRAQECRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSARFHDQ
Ga0306917_1087472213300031719SoilARECRQLQDKLIGDQPLTPERGEEIANTLKVAGCNASPPVR
Ga0306917_1130632413300031719SoilGCESSRSQSHDYQFEKQVKRARECRQLQDKLIGDQPLTPERGEEIANTLKVAGCNASPPV
Ga0318493_1042631713300031723SoilESSRSQSHDYQFEKQVKRAQECRQLQDKLIGDQPLTPERGEEIANTLKVAGCTASLPVR
Ga0306918_1083556913300031744SoilQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0306918_1118012113300031744SoilAQECRELQDKLVGDQPLTPERADEITKTMDRTGCTARLPAH
Ga0318554_1051087823300031765SoilSRDSPDRQFQKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRSGCTARLPAH
Ga0318509_1011233633300031768SoilPNLVGCESARSQDYQFEKQVKRAQKCRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSTRFHDQ
Ga0318509_1045677923300031768SoilSSRDSPDRQFQKQVKRAQECRQLQDKLVGDQPPTPERAEETAKTMDRAGCTARLPAH
Ga0318546_1128782623300031771SoilARSQDYQFEKQVKRAQECRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSARFHDQ
Ga0318498_1024702513300031778SoilVKRAQECRQLQDKLVGDQPLTPERAEETAKTMDRAGCTARLPAH
Ga0318508_103383623300031780SoilHDYQFEKQVKRAQECRQLQDKLIGDQPLTPERGEEIANTLKVAGCTASLPVR
Ga0318547_1014911113300031781SoilNLIGCESSQDSPDRQFQKQVKRAQECRELQDKLVGDQPLTPERAEEITKTMDRTGCIARLPAH
Ga0318552_1005844343300031782SoilLEKQVKRAQECRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSARFHDQ
Ga0318503_1009884633300031794SoilQLQDKLVGDQPLTPERGEEIAKTMGRNGCSARFHDR
Ga0318568_1003926513300031819SoilQLQDKLVGDQPLTPERAEEIAKTMDRAGCTARLPAH
Ga0318567_1032286523300031821SoilCRQLQDKLIGDQPLTPERGEEIANTLKVAGCTASLPVR
Ga0318567_1064096833300031821SoilKQVKRAQECRQLQDKLIGDQPLTPERGEEIAKTMGRNGCSARFHDQ
Ga0318499_1007475213300031832SoilESARSQDYQFEKQVKRAQECRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSTRFHDQ
Ga0318499_1011098413300031832SoilCESSRSQDYQFEKQVKRAQECRQLQDKLVGDQPLTPERGEEIANTLKGAGCTARLPVH
Ga0310917_1000637513300031833SoilDRQFQKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0310917_1009886413300031833SoilQSHDYQFEKQVKRARECRQLQDKLIGDQPLTPERGEEIANTLKVAGCNASPPVR
Ga0318495_1013931913300031860SoilSSRSQDYQFQKQVKRAQECRELQDKLVGDQPLTPERGEEIAKTMGRNGCSARFRDQ
Ga0306919_1007468513300031879SoilAQECRQLQDKLVGDQPLTPERREEIVNTMEGAGCTARLP
Ga0306925_1048697813300031890SoilESSRSEDYQFQKQVKRAQECRELQDKLVGDQPLTPERGEEIATIMDRSGCSAQLSTN
Ga0306925_1168138113300031890SoilQKQVKRAQECRELQDKLVGDRLITAERAEEITKTMDRTGCTGRLPAH
Ga0318536_1070685133300031893SoilESARSQDYQFEKQVTQECRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSARFHDQ
Ga0318522_1020627223300031894SoilCESARSQDYQFEKQVKRAQKCRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSTRFHDQ
Ga0318551_1039682223300031896SoilAQKCRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSTRFHDQ
Ga0318520_1095980723300031897SoilESSLGQNYQFEKQVKRAQECRQLQGKLVGEQPLTPERREEIANTMNGFGCTARLP
Ga0306923_1024017443300031910SoilSQEDYQFQKQVQRAQECRQLQDKLVVDQPLTPERREEIVNTMEGTGCTARLP
Ga0306921_1000937913300031912SoilKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0306921_1041643113300031912SoilCESSRSPDAQFQKQVKRAQECRQLQDKLVGDQPLTPERGEEIANTLKGAGCTARLPVH
Ga0306921_1053954013300031912SoilQFQKQVKRAQECRQLQDKLVGDQPLTPERAEETAKTMDRAGCTAWLPAH
Ga0310912_1022749043300031941SoilDYQFRKQVQRAREGRQLQDKLVGDQPLTPERREEIANTMEGTGCTARLP
Ga0310912_1113131413300031941SoilKQVKRAQECRELQDKLVGDQPLTPERGEEIAKTMGRNGCSARFRDQ
Ga0310916_1000812913300031942SoilDYQFQKQVQRAQECRQLQDKLVGDQPLTPERREEIVNTMEGTGCTARLP
Ga0310916_1000982913300031942SoilTPNLIGCESSRDSPDRQFQKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0310916_1041094623300031942SoilCESSRSPDAQFQKQVKRAQECRQLQDKLVGDQPLTPERGEEITNTMKGAGCTARLP
Ga0310913_1000068113300031945SoilVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0310913_1091618913300031945SoilLQFEKQVKRAQECRQLQDNLVRDQPLTLERREEITNTMGGMGCTARLP
Ga0310910_1002341583300031946SoilESSRDSPDRQFQKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0310910_1140308423300031946SoilATLILIGCESSRDSPDRQFQKQVKRAQECRELQDKLVGDRLITAERAEEITKTMDRTGCTGRLPAH
Ga0310909_1091536513300031947SoilPDAQFQKQVKRAQECRQLQDKLVGDQPLTPERGEEIANTLKGAGCTARLPVH
Ga0310909_1100224513300031947SoilLQDKLVGDQPLTPERAEEITKTMDRSGCTARLPAH
Ga0306926_1108496913300031954SoilRASSRSQDSQFEKQVKRAQECRQLQDKLVGDQPLTPERAEEITKTMDRSGCAARLPAH
Ga0306926_1247246713300031954SoilVESQRSQDYQFQKQVKRAQECRQLQDKLIGEQPLTPERAEEIAKTMDRSGCTARLPAH
Ga0318531_1044037613300031981SoilQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0306922_1000287613300032001SoilQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0306922_1090320033300032001SoilCRELQDKLVGDQPLTPERAEEITKTMDRTGCIARLPAH
Ga0306922_1182718313300032001SoilPTLVGCESSRSQEDYQFQKQVTRAQECRQLQDKLVGDQPLTPERREEIVNTMEGTGCTARLP
Ga0318569_1058901023300032010SoilKQVKRAQECRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSARFHDQ
Ga0310911_1078933613300032035SoilFQKQVKRAQECRQLQDKLIGDQPLTPERGEEITNILKVAGCTTRLSVN
Ga0318558_1025648923300032044SoilRARECRQLQDKLIGDQPLTPERGEEIANTLKVAGCNASPPVR
Ga0318506_1007800713300032052SoilVKRAQECRQLQDKLIGDQPLTPERGEEIANTLKVAGCNASPPVR
Ga0318504_1006696413300032063SoilDYQFEKQVKRAQKCRQLQDKLVGDQPLTPERGEEIAKTMGRNGCSTRFHDQ
Ga0318514_1036395213300032066SoilGCESSRSPDAQFQKQVKRAQECRQLQDKLVGDQPLTPERGEEIANTLKGAGCTARLPVH
Ga0318514_1069692613300032066SoilEKQVKRAQECRQLQGKLVGEQPLTPERREEIANTMNGFGCTARLP
Ga0318524_1028524813300032067SoilQFQKQVKRAQECRELQDKLVGDQPLTPERGEEIAKTMGRNGCSARFRDQ
Ga0306924_1000268813300032076SoilRQFQKQVKRAQECRQLQDKLVGDQPLTPERAEEIAKTMDRTGCTAGLPAH
Ga0306924_1195928013300032076SoilFEKQVKRAQECRQLQDKLVGDQPLTPERGEEITNTMKGAGCTARLP
Ga0318525_1059418923300032089SoilSSRSPDAQFQKQVKRAQECRQLQDKLVGDQPLTPERGEEIANTLKGAGCTARLPVH
Ga0318540_1064032213300032094SoilKQLKRAEECRQLQDKLVGDQPLTPERAEEIAKSMDRAGCTARLPDH
Ga0306920_10224574813300032261SoilAQECRQLQDKLIGDQPLTPERGEEITNILKVAGCTTRLSVN
Ga0306920_10269376813300032261SoilYQFQKQVKRAQECRQLQDKLVGDQPLTPERGEEITNTMKGAGCTARLP
Ga0310914_1089622413300033289SoilEKQVKRAQECRQLQDKLVGDQPLTPERGEEITNTMTGAGCTARLPSADAGVPPRL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.