NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F029918

Metagenome / Metatranscriptome Family F029918

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F029918
Family Type Metagenome / Metatranscriptome
Number of Sequences 187
Average Sequence Length 54 residues
Representative Sequence MIQEIGSVLGPRATARIATSALPGAPVLPDCQRRQYAVTRRLLGVLTGRSRSRA
Number of Associated Samples 131
Number of Associated Scaffolds 187

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.49 %
% of genes near scaffold ends (potentially truncated) 24.06 %
% of genes from short scaffolds (< 2000 bps) 86.10 %
Associated GOLD sequencing projects 122
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (58.289 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.439 % of family members)
Environment Ontology (ENVO) Unclassified
(26.203 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(37.968 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.
1cont_0489.00006700
2FI_00476110
3FD1_07880330
4Ga0066672_109691412
5Ga0066683_102540262
6Ga0070683_1010587523
7Ga0066388_1014273521
8Ga0066388_1023993822
9Ga0066388_1037164291
10Ga0070709_104462441
11Ga0070709_104564312
12Ga0070709_107632552
13Ga0070709_107781412
14Ga0070714_1000471261
15Ga0070714_1006961142
16Ga0070714_1009200983
17Ga0070714_1020383531
18Ga0070713_1023097892
19Ga0070710_100431984
20Ga0070711_1015899251
21Ga0070705_1001377753
22Ga0070708_1001017792
23Ga0066681_101512074
24Ga0066681_107142893
25Ga0070706_1000530934
26Ga0070741_1002344012
27Ga0068855_1017738622
28Ga0066691_101389261
29Ga0066654_105690792
30Ga0066903_1067309382
31Ga0070717_102082454
32Ga0070717_110596763
33Ga0066652_1002623754
34Ga0075015_1005681131
35Ga0070715_101053742
36Ga0075018_104665973
37Ga0070716_1005145901
38Ga0070712_1009079542
39Ga0070712_1009815621
40Ga0070712_1012091283
41Ga0070765_1010956832
42Ga0070765_1017080272
43Ga0070765_1017551202
44Ga0068871_1008355711
45Ga0079222_101333902
46Ga0079222_115970802
47Ga0066665_112149471
48Ga0079221_101588502
49Ga0079220_103951183
50Ga0079220_106320342
51Ga0079220_108827671
52Ga0079220_110350022
53Ga0079220_110597853
54Ga0075434_1012266452
55Ga0073928_102901761
56Ga0075424_1007598664
57Ga0075424_1018963542
58Ga0079219_109173541
59Ga0079219_110828452
60Ga0079219_113649242
61Ga0099795_102366882
62Ga0066710_1003439443
63Ga0105247_103493942
64Ga0105241_109249771
65Ga0105241_112986801
66Ga0126318_107756564
67Ga0127503_111312251
68Ga0126370_105287153
69Ga0126378_106475353
70Ga0126379_109571521
71Ga0126379_124806031
72Ga0134128_119425273
73Ga0134128_130543853
74Ga0126381_1013236132
75Ga0126381_1018608271
76Ga0126381_1039170912
77Ga0134126_110668114
78Ga0134126_118049292
79Ga0137776_11899831
80Ga0137364_104487503
81Ga0137365_101054253
82Ga0137365_101692165
83Ga0137381_117421651
84Ga0137379_101418813
85Ga0137384_100833563
86Ga0137397_103279111
87Ga0137413_110673821
88Ga0137407_101659022
89Ga0157369_107650902
90Ga0163163_105145171
91Ga0132258_101228586
92Ga0182041_102871492
93Ga0182034_103267833
94Ga0187809_100253162
95Ga0187785_100825854
96Ga0187765_108282591
97Ga0187765_110796311
98Ga0066667_105340381
99Ga0066667_109961781
100Ga0066669_102110134
101Ga0206353_100389622
102Ga0210407_107294952
103Ga0210399_101458692
104Ga0213881_100751322
105Ga0213875_100238253
106Ga0210397_100096124
107Ga0210397_100589494
108Ga0210389_105225944
109Ga0210386_101004364
110Ga0210390_108249812
111Ga0210402_101194893
112Ga0210402_103885664
113Ga0126371_107647352
114Ga0126371_112304201
115Ga0126371_128210481
116Ga0126371_137973252
117Ga0224712_102401021
118Ga0242662_102300513
119Ga0212123_103028042
120Ga0179589_102459364
121Ga0207692_101280302
122Ga0207692_101908173
123Ga0207692_103170812
124Ga0207692_107860741
125Ga0207685_100699713
126Ga0207684_100343633
127Ga0207693_104759774
128Ga0207693_107640241
129Ga0207663_107826341
130Ga0207661_101722295
131Ga0207661_119765831
132Ga0207674_115572502
133Ga0209239_10916222
134Ga0179593_10367324
135Ga0179587_103321062
136Ga0209178_11116462
137Ga0318516_100246983
138Ga0318516_102199181
139Ga0318534_100278674
140Ga0318534_104271962
141Ga0318571_102180801
142Ga0318573_104216572
143Ga0318555_102296432
144Ga0318560_101255941
145Ga0307476_100900082
146Ga0318494_107412842
147Ga0318509_107839791
148Ga0318498_100862591
149Ga0318566_100965951
150Ga0318523_101140331
151Ga0318536_102822291
152Ga0306923_105716732
153Ga0306921_106921821
154Ga0308175_1002937303
155Ga0308174_102745352
156Ga0306926_118150753
157Ga0306922_117409192
158Ga0318563_102020424
159Ga0318558_100791022
160Ga0318570_105307361
161Ga0307471_1003536713
162Ga0335085_1001416311
163Ga0335085_101828076
164Ga0335085_102088403
165Ga0335085_103498604
166Ga0335085_104170884
167Ga0335085_107190054
168Ga0335085_114471783
169Ga0335085_118103761
170Ga0335082_106678993
171Ga0335079_100297861
172Ga0335079_105298852
173Ga0335079_115544302
174Ga0335078_108317392
175Ga0335078_110135231
176Ga0335078_125538791
177Ga0335080_109154672
178Ga0335070_116438352
179Ga0335081_102671101
180Ga0335069_104475394
181Ga0335075_113512601
182Ga0335071_110105962
183Ga0335083_100381524
184Ga0335083_102951914
185Ga0335083_110484322
186Ga0335073_104543722
187Ga0335077_106216951
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 26.83%    β-sheet: 0.00%    Coil/Unstructured: 73.17%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550MIQEIGSVLGPRATARIATSALPGAPVLPDCQRRQYAVTRRLLGVLTGRSRSRASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.26
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
58.3%41.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Soil
Sediment
Iron-Sulfur Acid Spring
Watersheds
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grass Soil
Surface Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Soil
Grasslands Soil
Grass Soil
Soil
Soil
Hardwood Forest Soil
Soil
Soil
Tropical Peatland
Tropical Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Agricultural Soil
Exposed Rock
Arabidopsis Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Plant Roots
Populus Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Simulated
7.0%5.9%6.4%4.3%14.4%3.2%13.9%13.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
cont_0489.000067002166559005SimulatedMIQEIGSVLGPRATARIATSALPYAPVLPVPQRRQYTVTRRLLGVLTGRGRSRS
FI_004761102166559006Grass SoilMIQEIGSVLGPRATARIATSALPCAPVLPVPQRRQYTVTRRLLGVLTGRGRSRS
FD1_078803302170459024Grass SoilMIQEIGSVLGPRATARIATSALPYAPVLPVPQRRQYTVTRRLLGVLPGRGRSRS
Ga0066672_1096914123300005167SoilMIQEIGSVLGPRATARIATSALPGAPVLPFCQRRQYAVTRRILGVLTGRGRSRA*
Ga0066683_1025402623300005172SoilMACYPGHSLDKEIVMIQEIGSVLGPRATARIATSALPCAPVLPEPRQRYAVTRRLLGVLTGRSRSRA*
Ga0070683_10105875233300005329Corn RhizosphereMMQEIGHVIGSQATGRLATSALPNAPVLPECPRRYGVARRLLGALTGRGRARA*
Ga0066388_10142735213300005332Tropical Forest SoilMEIGSVLGMHATTRLATSALPCAPVLPEPRRREHAVTRRLLSALTGRGRSRD*
Ga0066388_10239938223300005332Tropical Forest SoilMIQEIGSVLGPRATARIATSALPCAPVLPVPQRRQRGVTRRLRSLLTGSGRSQA*
Ga0066388_10371642913300005332Tropical Forest SoilMTQEIGSVLGLRATTRLATSALPCAPVLPEPRRQTRGVTRRLLGALAGRDRA*
Ga0070709_1044624413300005434Corn, Switchgrass And Miscanthus RhizosphereMLQEIGHVIGSQATARIATSALPGAPVMPECQPRHRVARRLLGALTSRTRSRA*
Ga0070709_1045643123300005434Corn, Switchgrass And Miscanthus RhizosphereMSLEIGHVIGSRATARIATSALPCAPVLPEPQPGVARRLLGALTGRGRARA*
Ga0070709_1076325523300005434Corn, Switchgrass And Miscanthus RhizosphereMIQEIGSVLGPRATARIATSALPGAPVLPDCQRRQYAVTRRLLGVLTGRSRSRA*
Ga0070709_1077814123300005434Corn, Switchgrass And Miscanthus RhizosphereMIQEIGSVLGPRATARIATSALPGAPVLPYCQRRQHAVTRRLLGVLTGRSRSRA*
Ga0070714_10004712613300005435Agricultural SoilMSLEIGHVIGSRATARIATSALPGAPVQPVCQQRPGIARRLLGALTGRGRARA*
Ga0070714_10069611423300005435Agricultural SoilMMQEFGHVIGSQATGRLATSALPNAPVLPECPRRYGVARRLLGALTGRGRARA*
Ga0070714_10092009833300005435Agricultural SoilIGHVIGSRATARIATSALPCAPVLPEPQPGVARRLLGALTGRGRARA*
Ga0070714_10203835313300005435Agricultural SoilMIQEFGHVIGSQAMGRLATSALPNAPVLPECPRRYGVARRLLGALTGRGRARA*
Ga0070713_10230978923300005436Corn, Switchgrass And Miscanthus RhizosphereMIQEIGHVIGSQATSRLATSALPGAPVLPVCDPRPGVARRLLGALTGRGRARA*
Ga0070710_1004319843300005437Corn, Switchgrass And Miscanthus RhizosphereMIQEIGSVLGPQATARIATSALPGAPVLPDCQRRQYAATRRILGVLTGRSRSRA*
Ga0070711_10158992513300005439Corn, Switchgrass And Miscanthus RhizosphereIGHVVGSQATGRLATSALPNAPVLPECPRRYGVARRLLGALTGRGRARA*
Ga0070705_10013777533300005440Corn, Switchgrass And Miscanthus RhizosphereMIQEIGSVLGPRSTARIATSARPCAPALPEPQRRLQHAVSLRLLSVLTGRGRSRD*
Ga0070708_10010177923300005445Corn, Switchgrass And Miscanthus RhizosphereMIQEIGSVLGPRLTARIATSARPCAPALPEPQRRLQHAVSLRLLSVLTGRGRSRD*
Ga0066681_1015120743300005451SoilMIQEIGSVLGPRATARIATSALPGAPVLPFCQRRQYAVTRRILGVLTGRGRSRG*
Ga0066681_1071428933300005451SoilMTQEIGSVLGLQATTSLATSARPCAPVLPVPQRRQYAVTRRLLGVLTGRGRSRA*
Ga0070706_10005309343300005467Corn, Switchgrass And Miscanthus RhizosphereMIQEIGSVLGPRATARIATSARPGAPVLPDCPRRQHAVTRRLLGVLTGRSRSRA*
Ga0070741_10023440123300005529Surface SoilMIQEIGHVIGARATARIATSALPCAPVLPEPRPGVARRLLGRLTGR*
Ga0068855_10177386223300005563Corn RhizosphereMIQEIGSVLGPRATARIATSALPGALVLPYCQRRQHAVTRRLLGVLTGRSRSRA*
Ga0066691_1013892613300005586SoilMACYPGHSLDKEIVMIQEIGSVLGPRATARIATSALPGAPVLPYCQRRQHAVTRRLLGVLTGRSRSRA*
Ga0066654_1056907923300005587SoilMIQEIGHVIGSRATARIATSALPCAPVLPEPRPGVARRLLGALTGRARA*
Ga0066903_10673093823300005764Tropical Forest SoilMVQDMGPVIGLQATTRIATSALPCAPVLPVPERRQRRAATRRLLSRLTGSG
Ga0070717_1020824543300006028Corn, Switchgrass And Miscanthus RhizosphereMIQEIGSVLGPRATARIATSALPGAPVLPDCQRRQYAVTRRILGVLTGRSRSRA*
Ga0070717_1105967633300006028Corn, Switchgrass And Miscanthus RhizosphereMIQEIGHVIGSQATSRLATSALPGAPVLPVCEPRPGVARRLFGALTGRGRARA*
Ga0066652_10026237543300006046SoilMIQEIGSVLGPRATAQIATSALPWAPVLPDCPRRHYPVTRRVLGVLSGRSRSRA*
Ga0075015_10056811313300006102WatershedsMFPEMGSVLGHQATTRLATSALPWAPVLPESRRQHTVTRRLVSVLT
Ga0070715_1010537423300006163Corn, Switchgrass And Miscanthus RhizosphereMIQEIGSVLGPRATAQIATSALPGAPVLPDCQRRQYPVTRRILGVLTGRGRSRA*
Ga0075018_1046659733300006172WatershedsMIQEIGSVLGPRATARIATSALPCAPVLPEPQQRYAVTRRLLGVLTGRSRSRA*
Ga0070716_10051459013300006173Corn, Switchgrass And Miscanthus RhizosphereMVYEIGPVLGRQATSRLATSALPWAPVLPEPRRPQHTVTRRLLSVLTGHGRGQA*
Ga0070712_10090795423300006175Corn, Switchgrass And Miscanthus RhizosphereMIQEIGHVIGSQATSRLATSALPGAPVLPVCEPRPGVARRLLGALTGRARA*
Ga0070712_10098156213300006175Corn, Switchgrass And Miscanthus RhizosphereMAYEQAAGPVKEVVMMQEIGHVVGSQATGRLATSALPNAPVLPECPRRYGVARRL
Ga0070712_10120912833300006175Corn, Switchgrass And Miscanthus RhizosphereGSQATGRLATSALPNAPVLPECPRRYGVARRLLGALTGRGRARA*
Ga0070765_10109568323300006176SoilMIQEMGSVLGSRATARIATSALPWAPVLPVPQRRQYAATRWLLGALTGRGRSRA*
Ga0070765_10170802723300006176SoilMFPEMGSVLGHQATTRLATSALPWAPVLPESRRQHTVTRRLVSVLTGHGRG*
Ga0070765_10175512023300006176SoilMIQEIGSVLGSRATGRIATSALPCAPVLPGQPRRTHPVARRLRTALSGRGRHHG*
Ga0068871_10083557113300006358Miscanthus RhizosphereMVPEIGHVIGSRATARIATSALPCAPVLPEPQPGVARRLLGALTGRGRARA*
Ga0079222_1013339023300006755Agricultural SoilMAYEQAASPVKEVVMVPEIGHVIGSRATARIATSALPCAPVLPEPQPGVARRLLGALTGRGRARA*
Ga0079222_1159708023300006755Agricultural SoilMIQEIGHVIGSQATSRLATSALPGAPVLPVCEPRPGVARRLLGALTGRGRARA*
Ga0066665_1121494713300006796SoilMIQEIGSVLGPRATARIATSALPCAPVLPEPRQRYAVTRRLLGVLTGRSRSRA*
Ga0079221_1015885023300006804Agricultural SoilMACYPGHSLDKEIVMIQEIGSVLGPRATARIATSALPGAPVLPYCQRRQYAVTRRLLGVLTGRSRSRA*
Ga0079220_1039511833300006806Agricultural SoilMSLEIGHVIGSRATARIATSALPGAPVLPECPQRRGVARRLLGALTGHSRTRA*
Ga0079220_1063203423300006806Agricultural SoilMIQEIGHVVGSRATSRLATSALPNAPVLPEPQPGVARRLLSALTGRGRARA*
Ga0079220_1088276713300006806Agricultural SoilATTRMATSALPWAPVLPVRQRRQHAVTRRLLSVVTARGRSRD*
Ga0079220_1103500223300006806Agricultural SoilMIQEIGHVIGSQATSRLATSALPNAPVLPECPRRYGVARRLLGALTGRGRARA*
Ga0079220_1105978533300006806Agricultural SoilMMQEMGSVLGSRATARLATSALPSAPVLPVCQRRQYAVTRRILGVLSGRGRSRA*
Ga0075434_10122664523300006871Populus RhizosphereMACYPGHSLDKEIVMIQEIGSVLGPRATARIATSALPGAPVLPYCQRRQYAVTRRLLGVLTGRSRSRG*
Ga0073928_1029017613300006893Iron-Sulfur Acid SpringMTQEVGSHLGLQATTRIATSALPCAPVLPVPERRQHAVTRRLLGALTGRSRSRA*
Ga0075424_10075986643300006904Populus RhizosphereIGHVIGFQATARIATSALPCAPVLPEPRPGVARRLLGALTGRGRARA*
Ga0075424_10189635423300006904Populus RhizosphereMIQEIGHVIGSQATSRLATSALPNAPVLPECPRRHGVARRLLGALTGRGRARA*
Ga0079219_1091735413300006954Agricultural SoilMVQEIGPVFGQHATTRMTTSALPWAPVLPVRQRRQHAVTRRLLSVVTARGRSRD*
Ga0079219_1108284523300006954Agricultural SoilMAYEQAASPVREVVMVPEIGHVTGSRATARIATSALPCAPVLPEPQPGAARRLLGALTGRGRARA*
Ga0079219_1136492423300006954Agricultural SoilMMQEIGHVIGSQATVRLATSALPGAPVLPECPQRRGVARRLLGALTGRSRTRA*
Ga0099795_1023668823300007788Vadose Zone SoilMIQEIGSVLGPRATARIATSALPCAPVLPEPRQRYAVTHRLLGVLTGRSRSRA*
Ga0066710_10034394433300009012Grasslands SoilMIQEIGSVLGPRATAQIATSALPWAPVLPDCPRRHYPVTRRVLGVLSGRSRSRA
Ga0105247_1034939423300009101Switchgrass RhizosphereMIQEIGSVLGPRATARIATSALQGAPVLPDCQRRQYAVTRRLLGVLTGRSRSRA*
Ga0105241_1092497713300009174Corn RhizosphereMIQEIGHVIGSQATARIATSALPGAPVLPECQPRHRVARRLLGALTGRSRTRA*
Ga0105241_1129868013300009174Corn RhizosphereMIQEIGSVLGPRATARIATSALPGAPVLPYCQRPQHAVTRRLLGVLTGRNRSRA*
Ga0126318_1077565643300010152SoilVIGSQATSRLATSALPGAPVLPVCEPRPGVARRLLGALTGRGRARA*
Ga0127503_1113122513300010154SoilMIQEIGSVLGPRATARIATSALPCAPVLPVPQRRQYAATRRLLGALTGRGRSRA*
Ga0126370_1052871533300010358Tropical Forest SoilMIQEIGHVVGSQAMGRLATSALPNAPVLPECPQRYGVARRLLGALTGRGRARA*
Ga0126378_1064753533300010361Tropical Forest SoilMFQEIGSVLGPQATARIATSALPCAPVLPEPRRRQQTVTRRLLGVVTGRGRSRA*
Ga0126379_1095715213300010366Tropical Forest SoilMIQEIGSVLGPQATARIATSALPCAPVLPVPQRRQYAITRRLRTLLSGSGRSGA*
Ga0126379_1248060313300010366Tropical Forest SoilMTQEIGSVLGLRATTRLATSALPCAPVLPEPRRQTRGVTRRLLGALAGRGRA*
Ga0134128_1194252733300010373Terrestrial SoilLSGILEGAGMAREQAAGPSRRFVMVPEIGHVIGSRATARIATSALPGAPVLPECPQRRGVARRLLGALTGRGRARA*
Ga0134128_1305438533300010373Terrestrial SoilQAAGPVKEVVMIHEIGYVIGSRATTRIATSALPGAPVLPEPRPGVTRRLLGALTGRSRARA*
Ga0126381_10132361323300010376Tropical Forest SoilMFQEIGSVLGPQATARIATSARPCAPVLPEPRRRQQTVTRRLLGVVTGRGRSRA*
Ga0126381_10186082713300010376Tropical Forest SoilYVLGLRATARLATSALPCAPVLPKPRRRARGVTRRLLGALTGRGRA*
Ga0126381_10391709123300010376Tropical Forest SoilMIQEIGSVLGPQATARIATSALPCAPVLPVPQRRQRGVTRRLRSLLTGSSRSRA*
Ga0134126_1106681143300010396Terrestrial SoilMIQEIGSVLGPRATTRIATSALPGAPVLPYCQRRQHAVTRRLLGVLTGRSRSRA*
Ga0134126_1180492923300010396Terrestrial SoilMSLEIGHVIGSRATARIATSALPGAPVQPVCQQRPGVARRLLGALTGRGRARA*
Ga0137776_118998313300010937SedimentMVQEIGPVFGQHATTRLATSALPWAPVLPVPQRRQHAVTRRLLSVLTARGRSRD*
Ga0137364_1044875033300012198Vadose Zone SoilMIQEIGSVLGPRATARIATSALPWAPVLPDCQRRHYAVTRRVLGVLTGRSRSRA*
Ga0137365_1010542533300012201Vadose Zone SoilMACYPGHSLDKEIVMIQEIGSVLGPRATARIATSALPCAPVLPEPRQRYAVTRRLLGVLTGRSRSRP*
Ga0137365_1016921653300012201Vadose Zone SoilMMIQEIGSVLGSRATARIATSALPWAPVLPDCQRRHYAVTRRVLGVLTGRSRSRA*
Ga0137381_1174216513300012207Vadose Zone SoilMMIQEIGSVLGPRATARIATSALPCAPVLPEPRQRYAVTRRLLGVLTGRSRSRA*
Ga0137379_1014188133300012209Vadose Zone SoilMMIQEIGSVLGPRATARIATSALPWAPVLPDCQRRHYAVTRRVLGVLTGRSRSRA*
Ga0137384_1008335633300012357Vadose Zone SoilMTQEIGSVLGLQATTSLATSARPCAPVLPVPQRRQYAVTRRLLGVLTGRSRSRA*
Ga0137397_1032791113300012685Vadose Zone SoilMIQEIGSGLGARATARIATSALPCAPVLPEPRQRYAVTHRLLGVLTGRSRSRA*
Ga0137413_1106738213300012924Vadose Zone SoilMIQEIGSVLGPRATARIATSALPCAPVLPEPRQRYAVTHRLLGVL
Ga0137407_1016590223300012930Vadose Zone SoilMIQEIGHVIGSQATARIATSALPGAPVMPECQPRHRVARRLLGALTSRSRSRD*
Ga0157369_1076509023300013105Corn RhizosphereMSLEIGHVIGSRATARIATSALPGAPVLPEPRPGVTRRLLGALTGRGRARA*
Ga0163163_1051451713300014325Switchgrass RhizosphereMAREQAAGPSRRFVMVPEIGHVIGSRATARIATSALPGAPVLPECPQRRGVARRLLGALTGHSRTRA*
Ga0132258_1012285863300015371Arabidopsis RhizosphereMIQEIGSVLGPRATARIATSALPCAPVLPVPQRRQRGATRRLRSLLTGSGRSQA*
Ga0182041_1028714923300016294SoilMIQEIGSVLGPRATARIATSALPGAPVLPVPQRRQRGVTRRLRNLLTGSGRSQA
Ga0182034_1032678333300016371SoilMLQEIAAVLGPRATHGIATSALPCAPVLPVSQRRQHMVTRRLLSMLTGRGRSRG
Ga0187809_1002531623300017937Freshwater SedimentMFPEMGSVLGHRATTRLATSALPWAPVLPESRRQHTVTRRLVSLLTGRGRSWV
Ga0187785_1008258543300017947Tropical PeatlandMIQEIGSVLGPRATARIATSALPCAPVLPVPQRRQRGVTRRLRSLLTGSGRSQA
Ga0187765_1082825913300018060Tropical PeatlandMIQEIGSVLGPQATPRIATSALPWAPVLPEPRRRQYAVTRRVLSALTGRGSAGD
Ga0187765_1107963113300018060Tropical PeatlandMIQEIGSVLGPRATGRIATSALPCAPVLPVPQRRQRAVTRRLRSLLTGNGRSRA
Ga0066667_1053403813300018433Grasslands SoilMACYPGHSLDKEIVMIQEIGSVLGPRATAQIATSALPWAPVLPDCPRRHYPVTRRVLGVLSGRSRSRA
Ga0066667_1099617813300018433Grasslands SoilMTQEIGSVLGLQATTSLATSARPCAPVLPVPQRRQYAVTRRLLGVLTGRGRSRA
Ga0066669_1021101343300018482Grasslands SoilEIGHVIGSRATARIATSALPCAPVLPEPRPGVARRLLGALTGRGRARA
Ga0206353_1003896223300020082Corn, Switchgrass And Miscanthus RhizosphereMIQEIGSVLGPRATARIATSALPGAPVLPYCQRRQHAVTRRLLGVLTGRSRSRA
Ga0210407_1072949523300020579SoilMFPEMGSVLGHQATTRLATSALPWAPVLPESRRRQHTVTRRLV
Ga0210399_1014586923300020581SoilMIQEIGSVLGPRATARIATSALPYAPVLPEPQQRYAVTRRLLGVLTGHSRSRA
Ga0213881_1007513223300021374Exposed RockMSLEIGHVIGSQATARIATSALPGAPVQPVCEQRPGGARRLLGALTGRGRARA
Ga0213875_1002382533300021388Plant RootsMIQEMGHVMGSQATARIATSALPCAPVQPEPRRRQHAVTRRLLGALTGRGRSRA
Ga0210397_1000961243300021403SoilMIQEIGSVLGPRATARIATSALPGAPVLPDCQRRQYAVTRRILGVLTGRSRSRA
Ga0210397_1005894943300021403SoilMFPEMGSVLGHQATTRLATSALPWAPVLPESRRQHTVTRRLVSVLTGHGRG
Ga0210389_1052259443300021404SoilLPPGHSLDKEIVMIQEIGSVLGPRATARIATSALPGAPVLPDCQRRQYAVTRRILGVLTGRSRSRA
Ga0210386_1010043643300021406SoilMIQEIGSVLGSRATGRIATSALPCAPVLPGQPRRTHPVARRLRTALSGRGRHHG
Ga0210390_1082498123300021474SoilMTQEVGSHLGLRATTRIATSALPCAPVLPVPERRQHAVTRRLLGALTRHSHSRA
Ga0210402_1011948933300021478SoilMVQEIGSVFGLHATTRIATSALPWAPVLPEPRRRQHAVTRRLLSVLTARGRSRD
Ga0210402_1038856643300021478SoilMFPEMGSVLGHQATTRLATSALPWAPVLPESRRRQHTVTRRLVSALTGHSRGQA
Ga0126371_1076473523300021560Tropical Forest SoilMSLEIGHVIGSRATARIATSALPGAPVQPVCQQRPGVARRLLGALTGRGRGRA
Ga0126371_1123042013300021560Tropical Forest SoilMIQEIGSVLGPRATARIATTALPCAPVLPVPQRRQRGVTRRLRSLLTGSGR
Ga0126371_1282104813300021560Tropical Forest SoilMVQDFGAVVGLHATTRLATSALPCAPVLPVSQPRQHVITRRLLSVLTGRGRSGH
Ga0126371_1379732523300021560Tropical Forest SoilMEIGSVLGMHATTRLATSALPCAPVLPEPRRREHAVTRRLLSVLTGRGRSRD
Ga0224712_1024010213300022467Corn, Switchgrass And Miscanthus RhizospherePLPGHSLDKEIVMIQEIGSVLGPRATARIATSALPGAPVLPYCQRRQHAVTRRLLGVLTGRSRSRA
Ga0242662_1023005133300022533SoilFPEMGSVLGHQATTRLATSALPWAPVLPESRRQHTVTRRLVSVLTGHGRG
Ga0212123_1030280423300022557Iron-Sulfur Acid SpringMTQEVGSHLGLQATTRIATSALPCAPVLPVPERRQHAVTRRLLGALTGRSRSRA
Ga0179589_1024593643300024288Vadose Zone SoilMIQEIGSVLGPRATARIATSALPCAPVLPEPRQRYAVTHRLLGVLTGRSRSRA
Ga0207692_1012803023300025898Corn, Switchgrass And Miscanthus RhizosphereMIQEIGSVLGPRATAQIATSALPGAPVLPDCQRRQYPVTRRILGVLTGRGRSRA
Ga0207692_1019081733300025898Corn, Switchgrass And Miscanthus RhizosphereMIQEIGSVLGPQATARIATSALPGAPVLPDCQRRQYAATRRILGVLTGRSRSRA
Ga0207692_1031708123300025898Corn, Switchgrass And Miscanthus RhizosphereMLQEIGHVIGSQATARIATSALPGAPVMPECQPRHRVARRLLGALTSRTRSRA
Ga0207692_1078607413300025898Corn, Switchgrass And Miscanthus RhizosphereDGLPPGRSFDKEIVMIQEIGSVLGPRATARIATSALPGAPVLPDCQRRQYAVTRRILGVLTGRSRSRA
Ga0207685_1006997133300025905Corn, Switchgrass And Miscanthus RhizosphereMAYEQAAGPVKEVVMMQEIGHVVGSQATGRLATSALPNAPVLPECPRRYGVARRLLGALTGRGRARA
Ga0207684_1003436333300025910Corn, Switchgrass And Miscanthus RhizosphereMIQEIGSVLGPRATARIATSARPGAPVLPDCPRRQHAVTRRLLGVLTGRSRSRA
Ga0207693_1047597743300025915Corn, Switchgrass And Miscanthus RhizosphereRDGLPPGRPFDKEIVMIQEIGSVLGPRATAQIATSALPGAPVLPDCQRRQYPVTRRILGVLTGRGRSRA
Ga0207693_1076402413300025915Corn, Switchgrass And Miscanthus RhizosphereMMQEIGHVVGSQATGRLATSALPNAPVLPECPRRYGVARRLLGALTGRGRARA
Ga0207663_1078263413300025916Corn, Switchgrass And Miscanthus RhizosphereAYEQAAGPVKEVVMMQEIGHVVGSQATGRLATSALPNAPVLPECPRRYGVARRLLGALTGRGRARA
Ga0207661_1017222953300025944Corn RhizosphereMMQEIGHVIGSQATGRLATSALPNAPVLPECPRRYGVARRLLGALTGRGRARA
Ga0207661_1197658313300025944Corn RhizosphereMVPEIGHVIGSRATARIATSALPGAPVLPECPQRRGVARRLLGALTGHSRTRA
Ga0207674_1155725023300026116Corn RhizosphereMMQEFGHVIGSQATGRLATSALPNAPVLPECPRRYGVARRLLGALTGRGR
Ga0209239_109162223300026310Grasslands SoilMACYPGHSLDKEIVMIQEIGSVLGPRATARIATSALPCAPVLPEPRQRYAVTRRLLGVLTGRSRSRA
Ga0179593_103673243300026555Vadose Zone SoilMVQEIGHVIGSQATARIATSALPGAPVMPACQPRHGVARRLLGALTSRSSSRD
Ga0179587_1033210623300026557Vadose Zone SoilMIQEIGSVLGPRATARIATSALPCAPVLPEPRQRYAVTHRLLSVLTGRSRSRA
Ga0209178_111164623300027725Agricultural SoilMACYPGHSLDKEIVMIQEIGSVLGPRATARIATSALPGAPVLPYCQRRQYAVTRRLLGVLTGRSRSRA
Ga0318516_1002469833300031543SoilMTQEIGSVLGLRATTRLATSALPCAPVLPEPRRRTRGVTRRLLGALAGRDRA
Ga0318516_1021991813300031543SoilMVQEIGHVLGYQATTRIATSALPCAPVLPESRRRQPAVTRRLLSALSGRGRSRD
Ga0318534_1002786743300031544SoilMIQEIGSVLGPRATARIATSALPCAPVLPVPQRRQHAITRRLRSLLTGSGRSQA
Ga0318534_1042719623300031544SoilMEIGSVLGMHATTRLATSALPCAPVLPEPQRRQHAVTRRLLSALTGRGRSRD
Ga0318571_1021808013300031549SoilVMTQEIGSVLGLRATTRLATSALPCAPVLPEPRRRTRGVTRRLLGALAGRDRA
Ga0318573_1042165723300031564SoilMVQDMGSVLGLHATTRIATSALPCAPVLPVPERRQRRAAPRRLLSRLTGSGRTRA
Ga0318555_1022964323300031640SoilMVQEIGHVLGYQATTRIATSALPCAPVLPEPKRRQYAVTRRVLSVLSGRGSSRD
Ga0318560_1012559413300031682SoilYLALPRFLRVSGRPLPGRPLIKEIVMTQEIGSVLGLRATTRLATSALPCAPVLPEPRRRTRGVTRRLLGALAGRDRA
Ga0307476_1009000823300031715Hardwood Forest SoilMIQEIGSVLGPRATAQIATSALPCAPVLPVPQRRQYAATRRLLGVLTGRGRFR
Ga0318494_1074128423300031751SoilMEIGSVLGMHATTRLATSALPCAPVLPEPQRRQHAVTRRLLSAL
Ga0318509_1078397913300031768SoilLIKEIVMTQEIGSVLGLRATTRLATSALPCAPVLPEPRRRTRGVTRRLLGALAGRDRA
Ga0318498_1008625913300031778SoilLPGRPLIKEIVMTQEIGSVLGLRATTRLATSALPCAPVLPEPRRRTRGVTRRLLGALAGRDRA
Ga0318566_1009659513300031779SoilIKEIVMTQEIGSVLGLRATTRLATSALPCAPVLPEPRRRTRGVTRRLLGALAGRDRA
Ga0318523_1011403313300031798SoilPLIKEIVMTQEIGSVLGLRATTRLATSALPCAPVLPEPRRRTRGVTRRLLGALAGRDRA
Ga0318536_1028222913300031893SoilSVLGLRATTRLATSALPCAPVLPEPRRRTRGVTRRLLGALAGRDRA
Ga0306923_1057167323300031910SoilMVQEIGHVLGYQATTRIATSALPCAPVLPELKRRQFAVTRRVLGVLSGRGSSRD
Ga0306921_1069218213300031912SoilMVQEIGHVLGYQATTRIATSALPCAPVLPEPKRRQYAVTRRVLSVL
Ga0308175_10029373033300031938SoilMIQEIGHVIGSRATARIATSALPCAPVLPEPRPGIARRLLGALTGRARA
Ga0308174_1027453523300031939SoilMIQEIGYVVGSQATSRLATSALPGAPVLPECPQRRGVARRLLGALTGRSRTRA
Ga0306926_1181507533300031954SoilPLVKEVVMFPEMGAVLGHQATTRLATSALPWAPVLPESRRRQHMVTRRLVSVLTGHGRG
Ga0306922_1174091923300032001SoilMVQEIGHVLGFQATTRIATSALPCAPVLPESRRRQPAVTRRLLSALSGRGR
Ga0318563_1020204243300032009SoilIGSVLGLRATTRLATSALPCAPVLPEPRRRTRGVTRRLLGALAGRDRA
Ga0318558_1007910223300032044SoilMIQEIGSVLGPRATARIATSALPCAPVLPVPQRRQYAITRRLRSLLTGSGRSQA
Ga0318570_1053073613300032054SoilMVQDMGPVLGLHATTRIATSALPCAPVLPVPERRQRRAATRRLLS
Ga0307471_10035367133300032180Hardwood Forest SoilMIREIGSVLGPRATARIATSALPGAPVLPYCQRRQHAVTRRLLGVLTGRSRSRA
Ga0335085_10014163113300032770SoilMSLEIGHVIGSRATARIATSALPGAPVQPVCQQRPGVARRLLGALTSRGRARA
Ga0335085_1018280763300032770SoilMIQEIGSVLGPRATARIATSALPCAPVLPVPQRRQRAVTRRLRSLLTGNGRSRA
Ga0335085_1020884033300032770SoilMIQEIGSVLGPRATARIATSALPWAPVLPVPQRRQHAVTRRLRSLLTGTGRSGA
Ga0335085_1034986043300032770SoilMIQEIGSVLGPQATARIATSALPCAPVLPVPQRRQHAITRRLRTLLTGSGRSGA
Ga0335085_1041708843300032770SoilMFPEMGSVLGQHATARIATSALPCAPVLPEPRRRQYAITRRVLSVLSGRGRSGH
Ga0335085_1071900543300032770SoilVKEVVMVQEIGHVLGHQATNRLATSALPCAPVLSESPRRQHAVTRRLRSVLARRGHDQA
Ga0335085_1144717833300032770SoilMEIGSVLGMHATNRLATSALPCAPVLPEPRRRQHAVTRRLLSVLAARGRSRD
Ga0335085_1181037613300032770SoilMIPEIGHVIGSRATARIATSALPCAPVLPEPRPGVARRLLGTLTGRGRARG
Ga0335082_1066789933300032782SoilMFPEMGTVLGQHATTRIATSALPCAPVLPEPRRRQYAITRRVLSVLTGRGRGGH
Ga0335079_1002978613300032783SoilMIQEIGSVLGPQATARIATSALPCAPVLPVPQRRQRAVTRRLRSLLTGNGRSRA
Ga0335079_1052988523300032783SoilMIQEIGSVLGPRATARIATSALPCAPVLPVPQRRQRAVTRRLRSLLTGNGRSPA
Ga0335079_1155443023300032783SoilMFPEMGSVLGQHATARIATSALPCAPVLPEPRRRQYAITRRMVSVLIGRGRSGH
Ga0335078_1083173923300032805SoilMEIGSVLGMHATTRLATSALPCAPVLPEPQRRQHAVTRRLLSVLAARGRSRD
Ga0335078_1101352313300032805SoilEVVMFQEIGAVLGHQATTRIATSALPCAPVLPEPRRQHTVTRRLLSVLTGRGHGQA
Ga0335078_1255387913300032805SoilMSLEIGHVIGSRATARIATSALPGAPVQPVCQQRPGVARRLLGALTGRGRARA
Ga0335080_1091546723300032828SoilMIQEIGHVLGSRATVRLATSALPCAPVLPEPRRRPRAAARRVLGALTRRRPDLPVS
Ga0335070_1164383523300032829SoilMIQEIGHVIGSQATGRLATSALPGAPVLPECPQRRGVARRLLAALTGRSRTRA
Ga0335081_1026711013300032892SoilMVQDMGPVLGLQATTRIATSALPCAPVLPVRERRQRRAATRRLLSRLTG
Ga0335069_1044753943300032893SoilMIQEMGSVMGMQATTRLATSALPCAPVLPVPQPRQHVVTRRLLSVLTGRGRSRA
Ga0335075_1135126013300032896SoilGHVIGSQATGRIATSALPCAPVLPERQPRHGGVARRVLGVLTGRGRARG
Ga0335071_1101059623300032897SoilMGPEIGSVIGLQATTRIATSALPCAPVMPESRRRQYAATRRLLRVLSGRGHSRD
Ga0335083_1003815243300032954SoilMVQEIGHVLGHQATNRLATSALPCAPVLSESPRRQHAVTRRLRSVLARRGHDQA
Ga0335083_1029519143300032954SoilMFPEMGSVLGQHATARIATSALPCAPVLPEPRRRQYAITRRVLSVLTGRGR
Ga0335083_1104843223300032954SoilMFPEMGTVLGQHATTRIATSALPCAPVLPETQRRQYAITRRVLSVLTGRGRSGH
Ga0335073_1045437223300033134SoilMFPEIGSVLGHQATTRLATSALPWAPVLPECRRRQHTVTRRLVSVLTGHGRG
Ga0335077_1062169513300033158SoilMIQEIGSVLGPRATARIATSALPGAPVLPVCERRQYAVTRRILGVLTGRGRSRG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.