Metagenome / Metatranscriptome Family F029826

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F029826
Family Type	Metagenome / Metatranscriptome
Number of Sequences	187
Average Sequence Length	41 residues
Representative Sequence	MGLWESIIIVTLFSIGVIVMDEIIHARRRKRREREGAARVGH
Number of Associated Samples	126
Number of Associated Scaffolds	187

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.48 %
% of genes near scaffold ends (potentially truncated)	23.53 %
% of genes from short scaffolds (< 2000 bps)	82.35 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.722 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (21.390 % of family members)
Environment Ontology (ENVO)	Unclassified (40.107 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.497 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.29% β-sheet: 0.00% Coil/Unstructured: 45.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 187 Family Scaffolds
PF03176	MMPL	50.27
PF00005	ABC_tran	32.62
PF13180	PDZ_2	1.60
PF13551	HTH_29	0.53
PF00106	adh_short	0.53
PF02698	DUF218	0.53
PF13847	Methyltransf_31	0.53
PF10099	RskA	0.53
PF09822	ABC_transp_aux	0.53
PF02954	HTH_8	0.53
PF07044	DUF1329	0.53
PF14238	DUF4340	0.53
PF06537	DHOR	0.53
PF01546	Peptidase_M20	0.53
PF12679	ABC2_membrane_2	0.53

COG ID	Name	Functional Category	% Frequency in 187 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	50.27
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	50.27
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.53
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.53
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.72 %
Unclassified	root	N/A	4.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.72 %
Unclassified	root	N/A	4.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.72 %
Unclassified	root	N/A	4.28 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.75 %
Unclassified	root	N/A	4.28 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.53 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	42.78 %
Unclassified	root	N/A	4.28 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.07 %
bacterium HR30	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30	0.53 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	42.78 %
Unclassified	root	N/A	4.28 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.07 %
bacterium HR30	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30	0.53 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	21.39 %
Unclassified	root	N/A	4.28 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.07 %
bacterium HR30	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30	0.53 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	21.39 %
Unclassified	root	N/A	4.28 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.07 %
bacterium HR30	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30	0.53 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10373106	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	603	Open in IMG/M
3300003152\|Ga0052254_1167647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300004025\|Ga0055433_10112071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	630	Open in IMG/M
3300004114\|Ga0062593_100607612	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300004268\|Ga0066398_10095376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	682	Open in IMG/M
3300005166\|Ga0066674_10043876	All Organisms → cellular organisms → Bacteria → Proteobacteria	2004	Open in IMG/M
3300005166\|Ga0066674_10079170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1511	Open in IMG/M
3300005166\|Ga0066674_10566650	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005172\|Ga0066683_10007523	All Organisms → cellular organisms → Bacteria → Proteobacteria	5495	Open in IMG/M
3300005174\|Ga0066680_10749331	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	594	Open in IMG/M
3300005174\|Ga0066680_10878105	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300005177\|Ga0066690_10438861	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005180\|Ga0066685_10012152	All Organisms → cellular organisms → Bacteria → Proteobacteria	4880	Open in IMG/M
3300005180\|Ga0066685_10489251	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300005186\|Ga0066676_10232108	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1198	Open in IMG/M
3300005332\|Ga0066388_100587971	All Organisms → cellular organisms → Bacteria → Proteobacteria	1738	Open in IMG/M
3300005332\|Ga0066388_101880492	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300005332\|Ga0066388_102566973	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300005345\|Ga0070692_10951996	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005437\|Ga0070710_11535710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300005444\|Ga0070694_100964618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	706	Open in IMG/M
3300005444\|Ga0070694_101745574	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	530	Open in IMG/M
3300005445\|Ga0070708_100099479	All Organisms → cellular organisms → Bacteria	2661	Open in IMG/M
3300005445\|Ga0070708_100266452	All Organisms → cellular organisms → Bacteria → Proteobacteria	1611	Open in IMG/M
3300005445\|Ga0070708_101157888	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005446\|Ga0066686_10328132	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1042	Open in IMG/M
3300005446\|Ga0066686_11023562	Not Available	535	Open in IMG/M
3300005467\|Ga0070706_100121370	All Organisms → cellular organisms → Bacteria	2436	Open in IMG/M
3300005467\|Ga0070706_100847938	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300005467\|Ga0070706_100962198	Not Available	788	Open in IMG/M
3300005524\|Ga0070737_10002656	All Organisms → cellular organisms → Bacteria	20892	Open in IMG/M
3300005529\|Ga0070741_10000812	All Organisms → cellular organisms → Bacteria	104064	Open in IMG/M
3300005529\|Ga0070741_10003475	All Organisms → cellular organisms → Bacteria	39090	Open in IMG/M
3300005529\|Ga0070741_10069730	All Organisms → cellular organisms → Bacteria	3976	Open in IMG/M
3300005533\|Ga0070734_10000307	All Organisms → cellular organisms → Bacteria	116072	Open in IMG/M
3300005536\|Ga0070697_100176862	All Organisms → cellular organisms → Bacteria → Proteobacteria	1808	Open in IMG/M
3300005536\|Ga0070697_100837714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	815	Open in IMG/M
3300005536\|Ga0070697_101801221	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M
3300005540\|Ga0066697_10060272	All Organisms → cellular organisms → Bacteria → Proteobacteria	2166	Open in IMG/M
3300005540\|Ga0066697_10162062	All Organisms → cellular organisms → Bacteria → Proteobacteria	1323	Open in IMG/M
3300005540\|Ga0066697_10293283	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	957	Open in IMG/M
3300005545\|Ga0070695_100485070	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300005552\|Ga0066701_10345174	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300005552\|Ga0066701_10392573	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	859	Open in IMG/M
3300005555\|Ga0066692_11017959	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300005557\|Ga0066704_10876470	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	556	Open in IMG/M
3300005558\|Ga0066698_10019904	All Organisms → cellular organisms → Bacteria	3908	Open in IMG/M
3300005586\|Ga0066691_10733242	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005598\|Ga0066706_11015589	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300005713\|Ga0066905_100103533	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300005713\|Ga0066905_101566188	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	602	Open in IMG/M
3300005713\|Ga0066905_102204501	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	514	Open in IMG/M
3300005764\|Ga0066903_100702871	All Organisms → cellular organisms → Bacteria	1783	Open in IMG/M
3300005985\|Ga0081539_10033693	All Organisms → cellular organisms → Bacteria	3113	Open in IMG/M
3300006034\|Ga0066656_10129274	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300006034\|Ga0066656_10852893	All Organisms → cellular organisms → Bacteria → Proteobacteria	583	Open in IMG/M
3300006046\|Ga0066652_100723995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	948	Open in IMG/M
3300006175\|Ga0070712_101374493	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	616	Open in IMG/M
3300006755\|Ga0079222_10339683	All Organisms → cellular organisms → Bacteria → Proteobacteria	1007	Open in IMG/M
3300006755\|Ga0079222_12533946	Not Available	515	Open in IMG/M
3300006796\|Ga0066665_10054018	All Organisms → cellular organisms → Bacteria → Proteobacteria	2781	Open in IMG/M
3300006797\|Ga0066659_10320659	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300006797\|Ga0066659_10527870	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300006797\|Ga0066659_11455799	Not Available	573	Open in IMG/M
3300006844\|Ga0075428_102479622	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	531	Open in IMG/M
3300006852\|Ga0075433_10146145	All Organisms → cellular organisms → Bacteria → Proteobacteria	2102	Open in IMG/M
3300006871\|Ga0075434_101932089	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300006904\|Ga0075424_100021473	All Organisms → cellular organisms → Bacteria → Proteobacteria	6626	Open in IMG/M
3300006914\|Ga0075436_100865983	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	675	Open in IMG/M
3300007258\|Ga0099793_10630627	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	538	Open in IMG/M
3300009012\|Ga0066710_100328754	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300009012\|Ga0066710_100860805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1393	Open in IMG/M
3300009012\|Ga0066710_100887893	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300009012\|Ga0066710_102827525	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	685	Open in IMG/M
3300009038\|Ga0099829_11394655	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	579	Open in IMG/M
3300009089\|Ga0099828_10610953	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300009137\|Ga0066709_100407863	All Organisms → cellular organisms → Bacteria	1887	Open in IMG/M
3300009137\|Ga0066709_100513370	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300009137\|Ga0066709_100536053	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1655	Open in IMG/M
3300009137\|Ga0066709_102642510	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300009137\|Ga0066709_103395540	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300009137\|Ga0066709_104139322	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	528	Open in IMG/M
3300009147\|Ga0114129_12170902	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	669	Open in IMG/M
3300010046\|Ga0126384_10233978	All Organisms → cellular organisms → Bacteria → Proteobacteria	1475	Open in IMG/M
3300010046\|Ga0126384_10732997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	879	Open in IMG/M
3300010046\|Ga0126384_10922087	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	790	Open in IMG/M
3300010047\|Ga0126382_11179116	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300010047\|Ga0126382_12485270	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300010140\|Ga0127456_1017739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	505	Open in IMG/M
3300010303\|Ga0134082_10501502	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300010329\|Ga0134111_10205489	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300010335\|Ga0134063_10167785	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300010358\|Ga0126370_12141825	Not Available	550	Open in IMG/M
3300010362\|Ga0126377_12237530	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30	623	Open in IMG/M
3300010391\|Ga0136847_10386122	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300010391\|Ga0136847_11494592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	892	Open in IMG/M
3300010391\|Ga0136847_11578107	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300010391\|Ga0136847_12523971	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	590	Open in IMG/M
3300010391\|Ga0136847_13089060	All Organisms → cellular organisms → Bacteria → Proteobacteria	1014	Open in IMG/M
3300010397\|Ga0134124_11360935	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	735	Open in IMG/M
3300010400\|Ga0134122_10564611	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300010400\|Ga0134122_11078285	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	794	Open in IMG/M
3300010400\|Ga0134122_11080645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	793	Open in IMG/M
3300011271\|Ga0137393_10173595	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300011271\|Ga0137393_11127315	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	666	Open in IMG/M
3300012203\|Ga0137399_10739290	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	828	Open in IMG/M
3300012208\|Ga0137376_10073093	All Organisms → cellular organisms → Bacteria	2858	Open in IMG/M
3300012349\|Ga0137387_10009146	All Organisms → cellular organisms → Bacteria	5740	Open in IMG/M
3300012349\|Ga0137387_10109546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1934	Open in IMG/M
3300012354\|Ga0137366_10405768	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300012362\|Ga0137361_10489256	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300012374\|Ga0134039_1065233	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300012386\|Ga0134046_1277099	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300012410\|Ga0134060_1296714	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300012469\|Ga0150984_111971691	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	787	Open in IMG/M
3300012685\|Ga0137397_10299068	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300012922\|Ga0137394_10340688	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300012922\|Ga0137394_10925835	Not Available	727	Open in IMG/M
3300012927\|Ga0137416_11993607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300012930\|Ga0137407_10095091	All Organisms → cellular organisms → Bacteria → Proteobacteria	2541	Open in IMG/M
3300012930\|Ga0137407_10860721	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	857	Open in IMG/M
3300012930\|Ga0137407_11175380	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	728	Open in IMG/M
3300012948\|Ga0126375_11101210	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	654	Open in IMG/M
3300012957\|Ga0164303_11034157	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	587	Open in IMG/M
3300012971\|Ga0126369_13574483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300012972\|Ga0134077_10050760	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300014150\|Ga0134081_10298689	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300015359\|Ga0134085_10302752	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	703	Open in IMG/M
3300015374\|Ga0132255_101488393	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300017654\|Ga0134069_1317747	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300017947\|Ga0187785_10610611	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	561	Open in IMG/M
3300017973\|Ga0187780_10173313	All Organisms → cellular organisms → Bacteria → Proteobacteria	1500	Open in IMG/M
3300018058\|Ga0187766_10498062	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	820	Open in IMG/M
3300018058\|Ga0187766_11200630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300018431\|Ga0066655_10042984	All Organisms → cellular organisms → Bacteria	2285	Open in IMG/M
3300018431\|Ga0066655_10194914	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300018431\|Ga0066655_10296632	All Organisms → cellular organisms → Bacteria → Proteobacteria	1051	Open in IMG/M
3300018431\|Ga0066655_10462514	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	838	Open in IMG/M
3300018431\|Ga0066655_10652404	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	712	Open in IMG/M
3300018431\|Ga0066655_10748758	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	663	Open in IMG/M
3300018433\|Ga0066667_10008906	All Organisms → cellular organisms → Bacteria → Proteobacteria	4696	Open in IMG/M
3300018433\|Ga0066667_10821521	All Organisms → cellular organisms → Bacteria → Proteobacteria	792	Open in IMG/M
3300018468\|Ga0066662_12294456	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	567	Open in IMG/M
3300018482\|Ga0066669_12177918	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300019458\|Ga0187892_10137170	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300022724\|Ga0242665_10305523	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	558	Open in IMG/M
3300025324\|Ga0209640_11388453	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300025910\|Ga0207684_11677366	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	513	Open in IMG/M
3300025922\|Ga0207646_10519485	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1072	Open in IMG/M
3300025922\|Ga0207646_10826126	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	824	Open in IMG/M
3300026277\|Ga0209350_1137244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	550	Open in IMG/M
3300026297\|Ga0209237_1245228	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	550	Open in IMG/M
3300026307\|Ga0209469_1016454	All Organisms → cellular organisms → Bacteria	2659	Open in IMG/M
3300026308\|Ga0209265_1000247	All Organisms → cellular organisms → Bacteria	14245	Open in IMG/M
3300026313\|Ga0209761_1152711	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300026318\|Ga0209471_1224935	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300026326\|Ga0209801_1196036	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300026332\|Ga0209803_1149424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	905	Open in IMG/M
3300026332\|Ga0209803_1231903	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	646	Open in IMG/M
3300026334\|Ga0209377_1174407	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	767	Open in IMG/M
3300026335\|Ga0209804_1194525	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	856	Open in IMG/M
3300026480\|Ga0257177_1088750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	506	Open in IMG/M
3300026524\|Ga0209690_1068109	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300026532\|Ga0209160_1229757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	642	Open in IMG/M
3300026536\|Ga0209058_1047764	All Organisms → cellular organisms → Bacteria	2467	Open in IMG/M
3300027646\|Ga0209466_1058193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	780	Open in IMG/M
3300027671\|Ga0209588_1037203	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300027706\|Ga0209581_1011706	All Organisms → cellular organisms → Bacteria → Proteobacteria	5413	Open in IMG/M
3300027826\|Ga0209060_10001158	All Organisms → cellular organisms → Bacteria	31234	Open in IMG/M
3300027875\|Ga0209283_10959544	Not Available	513	Open in IMG/M
3300028536\|Ga0137415_10066961	All Organisms → cellular organisms → Bacteria	3457	Open in IMG/M
3300031114\|Ga0308187_10404014	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	540	Open in IMG/M
3300031720\|Ga0307469_10678142	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300031720\|Ga0307469_11032723	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	769	Open in IMG/M
3300031720\|Ga0307469_12456933	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300031740\|Ga0307468_100366156	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300031949\|Ga0214473_10211382	All Organisms → cellular organisms → Bacteria	2242	Open in IMG/M
3300031949\|Ga0214473_10409903	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300032001\|Ga0306922_11284846	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	741	Open in IMG/M
3300032180\|Ga0307471_102737754	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	626	Open in IMG/M
3300032782\|Ga0335082_10448791	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1153	Open in IMG/M
3300032829\|Ga0335070_10101959	All Organisms → cellular organisms → Bacteria	3002	Open in IMG/M
3300032893\|Ga0335069_10025461	All Organisms → cellular organisms → Bacteria → Proteobacteria	8108	Open in IMG/M
3300032893\|Ga0335069_11808583	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	649	Open in IMG/M
3300033433\|Ga0326726_10376553	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1344	Open in IMG/M
3300033433\|Ga0326726_11346724	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.65%
Host-Associated	Host-Associated	5.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.91%
Plants	Host-Associated → Plants	5.35%
Aquatic	Environmental → Aquatic	3.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.74%
Freshwater	Environmental → Aquatic → Freshwater	3.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.60%
Peat	Environmental → Terrestrial → Peat	1.07%
Marine	Environmental → Aquatic → Marine	0.53%
Cave	Environmental → Terrestrial → Cave	0.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.05%
Loam	Environmental → Terrestrial → Soil → Loam	14.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.21%
Lake	Environmental → Aquatic → Freshwater → Lake	2.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.07%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.53%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.53%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.53%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.21%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.60%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.07%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.07%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.53%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.53%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.53%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.21%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	2.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.14%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.07%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.07%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.53%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.53%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.53%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.53%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.53%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.53%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012374	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_103731062	3300002908	Grasslands Soil	MGLWESIIIVTLFSIGVIVMDEIIHARRRRRREREGAARVGH*
Ga0052254_11676471	3300003152	Sediment	VTIPQMSLWESVIIVVVFSIFVVVADEYIHARRRRRHEREDTARRAH*
Ga0055433_101120712	3300004025	Natural And Restored Wetlands	MTLWESVTIVTLFSVGVIVMDEIIHARRRKQREREGGGH*
Ga0062593_1006076122	3300004114	Soil	MGLWQSIITVTLFSVAVIVIDEIIHARRRRKREREGTARVGH*
Ga0066398_100953762	3300004268	Tropical Forest Soil	MGLWESVIIVTVFSIGVIVIDEYMHARRRKRREREGAARVGH*
Ga0066674_100438762	3300005166	Soil	MGLWESVIIVTVFSIGVIVIDEFIHARRRKRREREGAARVGH*
Ga0066674_100791701	3300005166	Soil	MGLWESIIIVTLFSIGVIVMDEIIHARRRKRREREGAARVGH*
Ga0066674_105666501	3300005166	Soil	MTLWESIIIVTLFSIAVIVMDEIIHARRRKRREREGAARVGH*
Ga0066683_100075236	3300005172	Soil	MTLWESVIIVTVFSIAVIVMDEIIHARRRKRREREGAARVGH*
Ga0066680_107493312	3300005174	Soil	MTLWESVIIVTVFSIAVIVMDEIIHARRRKRREREGATRVGH*
Ga0066680_108781051	3300005174	Soil	MTLWESIIIVTLFSIAVIVMDEIIHARRRRRREREGAARVGH*
Ga0066690_104388612	3300005177	Soil	MTLWESIIIVTVFSIAVIVMDEIIHGRRRRRREREGAARVGH*
Ga0066685_100121526	3300005180	Soil	GQQEATMGLWESIAIVVVFSIGVIVADEIIHARRRKRREREGAH*
Ga0066685_104892512	3300005180	Soil	AAMGLWESVAIVVVFSIGVIVADEIIHARRRKRREREGAH*
Ga0066676_102321081	3300005186	Soil	AMGLWESIIIVTLFSIGVIVMDEIIHARRRKRREREGAARVGH*
Ga0066388_1005879712	3300005332	Tropical Forest Soil	MGLWESVIIVTVFSIAVIVIDEFLHARRRRKREREGAARTGH*
Ga0066388_1018804922	3300005332	Tropical Forest Soil	MSLWQSIITVTLFSVAVIVIDEIIHARRRRKREREGTARVGH*
Ga0066388_1025669732	3300005332	Tropical Forest Soil	MTIWESIIIVTLFSVAVIVIDEIIHARRRKRREREGGVRAGH*
Ga0070692_109519962	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MGLWESVIIVTVFSIVVIAADEWMHARRRKRHEREGTARTTH*
Ga0070710_115357101	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGLWQSIITVTLFSIAVIVIDEIIHARRRRKREREGTARVGH*
Ga0070694_1009646181	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MGLWESVAIVTVFSIAVIVADEYMHARRRRKREREGAARSGH*
Ga0070694_1017455741	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MGLWQSVIIITLFSIFVIVTDEWLHARRRKKRQREGAARVGH*
Ga0070708_1000994792	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGLWESVIIVTLFSIAVIVMDEIIHARRRKRREREGAARVGH*
Ga0070708_1002664522	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGLWESVVIVTVFSIGVIVMDEIIHARRRRRREREGSTRVGH*
Ga0070708_1011578881	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTIWESIIIVTLFSVAVIVIDEIIHARRRKKREREGGVRVPGH*
Ga0066686_103281321	3300005446	Soil	ATMGLWESIGIVVIFSIGVIVADEIIHARRRKRREREGAH*
Ga0066686_110235621	3300005446	Soil	MTLWTSIIIVTLFSIAVIVVDEIIHARRRKKREREGGVRVGH*
Ga0068867_1005933281	3300005459	Miscanthus Rhizosphere	MGLWECVITVTIFSIIVIAADEWMHARRRKRHEREGTARTTH*
Ga0070706_1001213703	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTIWESIIIVTLFSVAVIVIDEIIHARRRRKREREGGVRVPGH*
Ga0070706_1008479382	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGLWQSIITVTLFSIAVIVIDEIIHARRRKRREREGGARVGH*
Ga0070706_1009621982	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTLWESIIIVTLFSIGVIVMDEIIHARRRRRREREGAARVGH*
Ga0070737_1000265621	3300005524	Surface Soil	MTLWQSVAIVVLFSIGVIVADEVMHARRRRRREREQAAREGH*
Ga0070741_1000081226	3300005529	Surface Soil	MGLWESIAIVTVFSIAVIVIDEIIHARRRKRREGAGAARAGH*
Ga0070741_100034757	3300005529	Surface Soil	MTIPQMGLWESIIIVILFSIGVIAMDEVIHARRRKAKEREGGGRPTN*
Ga0070741_100697302	3300005529	Surface Soil	MGLWESVIIVVVFSIGVIVADEMMHARRRKKREREGAARIGH*
Ga0070734_1000030780	3300005533	Surface Soil	MTLWESVTIVVLFSIGVIVADEVIHARRRRRREREQAAREGH*
Ga0070697_1001768623	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGLWESVIIVTLFSIGVIVIDEYMHARRRKRREREGAARVGH*
Ga0070697_1008377142	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTLWQSVITVTLFSIAVIVIDEIIHARRRKRREREGGARVGH*
Ga0070697_1018012211	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTIWESIIIVTLFSVAVIVIDEIIHARRRKRREREGGVRVGH*
Ga0066697_100602722	3300005540	Soil	MGLWESIAIVVVFSIGVIVADEIIHARRRKRREREGAH*
Ga0066697_101620622	3300005540	Soil	MGLWESIAIVVLFSIGVIVTDEIIHARRRKRREREGAH*
Ga0066697_102932832	3300005540	Soil	MGLWESVAIVVVFSIGVIVADELIHARRRKRREREGAH*
Ga0070695_1004850702	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSLWESVIIVSLFSVAVIVIDEIIHARRRKRREREGVTRVAH*
Ga0066701_103451742	3300005552	Soil	MTLWESIIIVTLFSVAVIVMDEIIHARRRKRREREGAARVGH*
Ga0066701_103925732	3300005552	Soil	MGLWESVAIVVVFSIGVIVADEIIHARRRKRREREGAH*
Ga0066692_110179591	3300005555	Soil	MGLWESIGIVVIFSIGVIVADEIIHARRRKRREREGAH*
Ga0066704_108764702	3300005557	Soil	MGLWESVAIVVVFSIGVIVADEIMHARRRKRREREGAH*
Ga0066698_100199042	3300005558	Soil	MGLWESIAIVVVFSIGVIVTDEIIHARRRKRREREGAH*
Ga0066691_107332422	3300005586	Soil	MGLWDSIIIVTLFSIFVIVTDEIIHARRRKRREREGAARVGH*
Ga0066706_110155892	3300005598	Soil	MGLWESIIIVTLFSIAVIVMDEIIHARRRRRREREGAARVGH*
Ga0066905_1001035332	3300005713	Tropical Forest Soil	MTIWESIIIVTLFSVAVIVIDEIIHARRRKKREQEGGVRAGH*
Ga0066905_1015661882	3300005713	Tropical Forest Soil	MGLWQSIITVTLFSIAVIVIDEIIHARRRRRREREGTARVGH*
Ga0066905_1022045011	3300005713	Tropical Forest Soil	MGLWESVVIVVLFSIGVIVMDEVIHARRRKRREREGGA
Ga0066903_1007028712	3300005764	Tropical Forest Soil	MTIWESIIIVTLFSVAVVVIDEIIHARRRKRREREGGVRAGH*
Ga0081539_100336932	3300005985	Tabebuia Heterophylla Rhizosphere	MGLWESVIIVTVFSILVIVADEVIHARRRRKREQEGVARLPH*
Ga0066656_101292741	3300006034	Soil	LMGLWESIIIVTLFSIGVIVMDEIIHARRRKRREREGAARVGH*
Ga0066656_108528932	3300006034	Soil	MTLWTSIIIVTLFSIAVIVVDEIIHARRRKTREREGGVRVGH*
Ga0066652_1007239952	3300006046	Soil	MGLWESIAIVVLFSIGVIVTDEIIHARRRKRRERE
Ga0070712_1013744931	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTIWESIIIVTLFSVAVIVIDEIIHARRRKKREREGGLRVPGH*
Ga0079222_103396832	3300006755	Agricultural Soil	MGLWSSIITVTVFSIAVIVIDEIIHARRRKRREREGAARVGH*
Ga0079222_125339461	3300006755	Agricultural Soil	MTIWESIIIVTLFSVAVIVIDEIIHARRRKKREREGGVRVGGH*
Ga0066665_100540182	3300006796	Soil	MGLWESIAIVVVFSIGVIITDEIIHARRRKRREREGAH*
Ga0066659_103206592	3300006797	Soil	MGLWESIAIVVLFSIGVIVADEIIHARRRKRREREGAH*
Ga0066659_105278702	3300006797	Soil	MTLWESVIIVTLFSIAVIVMDEIIHARRRRRREREGAARVGH*
Ga0066659_114557991	3300006797	Soil	MTIWESIIIVTLFSVAVIVIDEIIHARRRRKREREGVRVPGH*
Ga0075428_1024796221	3300006844	Populus Rhizosphere	MGLWESVIIVTIFSIIVIAADEWMHARRRKRHEREGTARTTH*
Ga0075433_101461452	3300006852	Populus Rhizosphere	MGLWQSVITVTLFSVAVIVIDEIIHARRRRKREREGTARVGH*
Ga0075434_1019320892	3300006871	Populus Rhizosphere	MGLWSSIITVTLFSIAVIVIDEIIHARRRKRRAREGAARVGH*
Ga0075424_1000214736	3300006904	Populus Rhizosphere	MGLWQSVITVTLFSIAVIVIDEIIHARRRRKREREGTARVGH*
Ga0075436_1008659832	3300006914	Populus Rhizosphere	MGLWSSIITVTLFSIAVIVIDEIIHARRRRKREREGTARVGH*
Ga0099793_106306272	3300007258	Vadose Zone Soil	MMGLWESIGIVVLFSIGVIVTDEIIHARRRKRREREGAH*
Ga0066710_1003287542	3300009012	Grasslands Soil	MGLWESVIIVTVFSIGVIVIDEFIHARRRKRREREASACVGH
Ga0066710_1008608053	3300009012	Grasslands Soil	MTLWTSIIIVTLFSIAVIVVDEIIHARRRKTREREGGVRVGGH
Ga0066710_1008878931	3300009012	Grasslands Soil	MGLWESVAIVVVFSIGVIVADELIHARRRKRREREGAH
Ga0066710_1028275252	3300009012	Grasslands Soil	MGLWESIIIVTLFSIAVIVMDEIIHARRRRRREREGAARVGH
Ga0099829_113946551	3300009038	Vadose Zone Soil	MTLWESIIIVTLFSIAVIVMDEVIHARRRKRREREGAARVGH*
Ga0099828_106109532	3300009089	Vadose Zone Soil	MGLWESIIIVTLFSIGVIVMDEIIHARRRRRREREGA
Ga0066709_1004078631	3300009137	Grasslands Soil	MGLWESVIIVTVFSIGVIVIDEFIHARRRKRREREGAARV
Ga0066709_1005133701	3300009137	Grasslands Soil	MGLWESIAIVVVFSIGVIVMDEIIHARRRKRREREGAH*
Ga0066709_1005360533	3300009137	Grasslands Soil	ESVIIVTVFSIGVIVIDEFIHARRRKRREREGAARVGH*
Ga0066709_1026425101	3300009137	Grasslands Soil	MTLWESVIIVTLFSIAVIVMDEIIHARRRKRREREGAARVGH*
Ga0066709_1033955402	3300009137	Grasslands Soil	MGLWQSVVIVTLFSIFVIVTDEIIHARRRKRREREGAARVGH*
Ga0066709_1041393222	3300009137	Grasslands Soil	LWESIIIVTLFSIAVIVMDEIIHARRRRRREREGAARVGH*
Ga0114129_121709022	3300009147	Populus Rhizosphere	MGLWQSVITVTLFSIAVIVIDEIIHARRRRKREREGTARVG
Ga0126384_102339782	3300010046	Tropical Forest Soil	MTMWESIIIVTLFSIGVIVADEIMHARRRRAKERQQGARQGH*
Ga0126384_107329972	3300010046	Tropical Forest Soil	MTIWESIIIVTLFSVAVIVIDEIIHARRRRKREREGGVRVGGH*
Ga0126384_109220871	3300010046	Tropical Forest Soil	IIIVTLFSVAVIVIDEIIDARRRKKREQEGGVRAGH*
Ga0126382_111791162	3300010047	Tropical Forest Soil	MPQMTMWESIIIVTLFSIGVIVADEIMHARRRRAKERQQGARQGH*
Ga0126382_124852702	3300010047	Tropical Forest Soil	MGLWSSIITVTVFSIAVIVIDEIIHARRRKRRAREGAARVGH*
Ga0127456_10177392	3300010140	Grasslands Soil	MTLWESIIIVTLFSIAVIVMDEIIHARRRKRREREGAARVG
Ga0134082_105015022	3300010303	Grasslands Soil	AMGLWESIIIVTLFSIGVIVMDEIIHARRRRRREREGAARVGH*
Ga0134111_102054892	3300010329	Grasslands Soil	MTLWESVIIVTVFSIAVIVMDEIIHARRRKRREREG
Ga0134063_101677852	3300010335	Grasslands Soil	AAMTLWESIIIVTLFSIAVIVMDEIIHARRRKRREREGAARVGH*
Ga0126370_121418251	3300010358	Tropical Forest Soil	MTIWESIIIVTLFSVAVIVIDEIIHARRRKKREREGGVRVGH*
Ga0126377_122375301	3300010362	Tropical Forest Soil	GPPMGLWESVIIVTVFSIGVIVIDEYMHARRRKRREREGAARVGH*
Ga0136847_103861222	3300010391	Freshwater Sediment	MGLWESIIIVVLFSVGVIIMDEIIHARRRKRREREGAARVGH*
Ga0136847_114945922	3300010391	Freshwater Sediment	MGLWDSIVIVLVFSVVVIVADEIFHARRRRRREREHATHEGH*
Ga0136847_115781071	3300010391	Freshwater Sediment	MGLWESVVIVVLFSIGVIVMDEIIHARRRKRREREGTGH*
Ga0136847_125239712	3300010391	Freshwater Sediment	MGLWDSVIIVVVFSIAVIVMDEIIHARRRKRREREGTGH*
Ga0136847_130890602	3300010391	Freshwater Sediment	MSLWESVIIVTVFSIVVIVADEYMHARRRKRREREGAARVSH*
Ga0134124_113609351	3300010397	Terrestrial Soil	MTIWESIIIVTLFSVAVIVIDEIIHARRRKQREREGGLRVGGH*
Ga0134122_105646111	3300010400	Terrestrial Soil	MGLWESVIIVTVFSIVVIVADEFMHARRRKRRGGAL
Ga0134122_110782851	3300010400	Terrestrial Soil	MSLWESVIIVSLFSVAVIVIDEIIHARRRKRREREGAVRVGH*
Ga0134122_110806452	3300010400	Terrestrial Soil	MTLWESVIITVLFSVGVIVMDEVIHARRRKRKEREGQGHPGH*
Ga0137393_101735951	3300011271	Vadose Zone Soil	MGLWESVIIVTLFSIAVIVMDEIIHARRRKRREREGAARVG
Ga0137393_111273152	3300011271	Vadose Zone Soil	MTLWESIIICTLFSIAVIVMDEIIHARRRRRREREGAARVGH*
Ga0137399_107392902	3300012203	Vadose Zone Soil	MGLWSSIITVTLFSIAVIVIDEIIHARRRKRREREGAARVGH*
Ga0137376_100730931	3300012208	Vadose Zone Soil	MTLWESIIIVTLFSIAVIVMDEIIHARRRRRREREG
Ga0137387_100091462	3300012349	Vadose Zone Soil	MTLWESIIIVTLFSIAVIVMDEIIHARRRRRRERGGAARVGH*
Ga0137387_101095463	3300012349	Vadose Zone Soil	MGLWESIIIVTLFSIGVIVMDEIIHARRRRRREREG
Ga0137366_104057682	3300012354	Vadose Zone Soil	MGLWESIIIVTLFSIAVIVMDEIIHARRRKRREREG
Ga0137361_104892561	3300012362	Vadose Zone Soil	MTLWESIIIVTLFSVAVIVMDEIIHARRRRRREREGAARVGH*
Ga0134039_10652332	3300012374	Grasslands Soil	MTLWESVIIITVFSIAVIVMDEIIHARRRKRREREGAARVG
Ga0134046_12770991	3300012386	Grasslands Soil	MGLWESIIIVTLFSIAVIVMDEIIHARRRKRREREGAARVG
Ga0134060_12967142	3300012410	Grasslands Soil	MGLWESVIIVTLFSIAVIVMDEIIHARRRRRREREGAARVGH*
Ga0150984_1119716912	3300012469	Avena Fatua Rhizosphere	MTLWESVIIVTVFSIGVIVMDELIHARRRKRREREGTGH*
Ga0137397_102990681	3300012685	Vadose Zone Soil	MGLWSSIITVTLFSIAVIVIDEIIHARRRKRREREGITRVAH*
Ga0137394_103406882	3300012922	Vadose Zone Soil	MGLWSSIITVTLFSIAVIVIDEIIHARRRRRREREGAARVGH*
Ga0137394_109258352	3300012922	Vadose Zone Soil	MGLWESVIIVTVFSIVVIVIDEFIHARRRKRREREGAVRVSH*
Ga0137416_119936071	3300012927	Vadose Zone Soil	MGLWESVIIVTVFSIGVIVIDEFMHARRRKRREREGAARVGH*
Ga0137407_100950912	3300012930	Vadose Zone Soil	MGLWESIGIVVLFSIGVIVTDEIIHARRRKRREREGAH*
Ga0137407_108607211	3300012930	Vadose Zone Soil	IIIVTLFSIAVIVMDEIIHARRRKRREREGAARVGH*
Ga0137407_111753802	3300012930	Vadose Zone Soil	MGLWESVIIVSVFSVAVIVIDEFIHARRRKRREREGITHVAH*
Ga0126375_111012102	3300012948	Tropical Forest Soil	MGLWESVTIVVVFSIGVIVMDEIIHARRRKRREREGAARVGH*
Ga0164303_110341572	3300012957	Soil	MGLWSSIITVTLFSIAVIVIDVIIHARRRKRREREGAVRVGH*
Ga0126369_135744832	3300012971	Tropical Forest Soil	MPQMTMWESIVIVTLFSIGVIVADEIMHAQRRRAKERQHGARQGH*
Ga0134077_100507603	3300012972	Grasslands Soil	IVTLFSIAVIVMDEIIHARRRKRREREGAARVGH*
Ga0134081_102986891	3300014150	Grasslands Soil	SVIIVTVFSIGVIVMDELIHARRRKRREREGTGH*
Ga0134085_103027521	3300015359	Grasslands Soil	MGLWESIGIVVIFSIGVIVADEIIHARRRKRREREGA
Ga0132255_1014883932	3300015374	Arabidopsis Rhizosphere	MTIWESIIIVTLFSVAVIVIDEIIHARRRRKREREGTARVGH*
Ga0134069_13177471	3300017654	Grasslands Soil	EALMGLWESIIIVTLFSIGVIVMDEIIHARRRKRREREGAARVGH
Ga0187785_106106112	3300017947	Tropical Peatland	MGLWESVVIVVVFSIGVIVADEIIHARRHRRRERQ
Ga0187780_101733133	3300017973	Tropical Peatland	MTIPQMGLWESLIIVVAFSIFVVVADEYIHARRKRQHEREDAARRGH
Ga0187766_104980621	3300018058	Tropical Peatland	MGLWSSIITVTVFSIAVIVIDEIIHARRRKRREREGAARAGH
Ga0187766_112006302	3300018058	Tropical Peatland	MGLWSSIITVTVFSIAVIVIDEIIHARRRKRREREGGARAGH
Ga0066655_100429842	3300018431	Grasslands Soil	MTLWESVIIVTVFSIAVIVMDEIIHARRRKRREREGAARVGH
Ga0066655_101949142	3300018431	Grasslands Soil	MGLWESIAIVVVFSIGVIVTDEIIHARRRKRREREGAH
Ga0066655_102966322	3300018431	Grasslands Soil	MGLWESVIIVTVFSIGVIVIDEFIHARRRKRREREGAARVGH
Ga0066655_104625142	3300018431	Grasslands Soil	TMGLWESIGIVVIFSIGVIVADEIIHARRRKRREREGAH
Ga0066655_106524041	3300018431	Grasslands Soil	MTLWESIIIVTLFSIAVIVMDEIIHARRRKRREREGAARVGH
Ga0066655_107487582	3300018431	Grasslands Soil	MGLWESIIIVTLFSIGVIVMDEIIHARRRKRREREGAARVGH
Ga0066667_100089062	3300018433	Grasslands Soil	MGLWESIAIVVVFSIGVIITDEIIHARRRKRREREGAH
Ga0066667_108215212	3300018433	Grasslands Soil	MTLWESVIIVTVFSIAVIVMDEIIHARRRKRREREGATRVGH
Ga0066662_122944561	3300018468	Grasslands Soil	MGLWESIIIVTLFSIGVIVMDEIIHARRRKRREREGAAR
Ga0066669_121779181	3300018482	Grasslands Soil	SIIIVTLFSIGVIVMDEIIHARRRKRREREGAARVGH
Ga0187892_101371702	3300019458	Bio-Ooze	MGLWDSVVIVVVFSIAVIVIDEMIHARRRKRRERERGAASGH
Ga0242665_103055232	3300022724	Soil	MGLWESVIIVTLFSIAVIVMDEIIHARRRKRREREGAARVGH
Ga0209640_113884531	3300025324	Soil	MLEQWGLWESIIVVLGFSIIVIVADEWLHARRRKRREREGAARAGH
Ga0207684_116773662	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGLWQSIITVTLFSIAVIVIDEIIHARRRRKREREG
Ga0207646_105194852	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGLWESVAIVVVFSIGVIVADEIMHARRRKRREREGAH
Ga0207646_108261262	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGLWESVVIVTLFSIGVIVMDEIIHARRRRRREREGSTRVGH
Ga0209350_11372441	3300026277	Grasslands Soil	MGLWESIIIVTLFSIGVIVMDEIIHARRRKRRERE
Ga0209237_12452281	3300026297	Grasslands Soil	MTLWESIIIVTLFSIAVIVMDEIIHARRRKRREREGAAR
Ga0209469_10164544	3300026307	Soil	MTLWESVIIVTLFSIAVIVMDEIIHARRRKRREREGAARVGH
Ga0209265_10002472	3300026308	Soil	MGLWESIAIVVVFSIGVIVADEIIHARRRKRREREGAH
Ga0209761_11527111	3300026313	Grasslands Soil	MGLWESIIIVTLFSIGVIVMDEIIHARRRKRREREG
Ga0209471_12249352	3300026318	Soil	MGLWESIAIVVLFSIGVIVADEIIHARRRKRREREGAH
Ga0209801_11960362	3300026326	Soil	MTLWESVIIVTLFSIAVIVMDEIIHARRRRRREREGAARVGH
Ga0209803_11494242	3300026332	Soil	TLWESIIIVTLFSIAVIVMDEIIHARRRKRREREGAARVGH
Ga0209803_12319031	3300026332	Soil	MGLWESIIIVTLFSIGVIVMDEIIHARRRKRREREGA
Ga0209377_11744072	3300026334	Soil	MGLWESIGIVVIFSIGVIVADEIIHARRRKRREREGAH
Ga0209804_11945252	3300026335	Soil	MGLWESIAIVVVFSIGVIVMDEIIHARRRKRREREGAH
Ga0257177_10887501	3300026480	Soil	MGLWESIIIVTLFSIGVIVMDEIIHARRRRRREREGAARV
Ga0209690_10681092	3300026524	Soil	MTLWESIIIVTLFSVAVIVMDEIIHARRRKRREREGAARVGH
Ga0209160_12297572	3300026532	Soil	MGLWESIIIVTLFSIGVIVMDEIIHARRRKRREREGAARVG
Ga0209058_10477642	3300026536	Soil	MGLWESVIIVTLFSIAVIVMDEIIHARRRRRREREGAARVGH
Ga0209466_10581931	3300027646	Tropical Forest Soil	MPQMTMWESIVIVTLFSVGVIVADEIMHARRRRAKERQQGARQGH
Ga0209588_10372032	3300027671	Vadose Zone Soil	MGLWESIIIVTLFSIGVIVMDEIIHARRRRRREREGAARVGH
Ga0209581_10117066	3300027706	Surface Soil	MTLWQSVAIVVLFSIGVIVADEVMHARRRRRREREQAAREGH
Ga0209060_1000115829	3300027826	Surface Soil	MTLWESVTIVVLFSIGVIVADEVIHARRRRRREREQAAREGH
Ga0209283_109595441	3300027875	Vadose Zone Soil	MGLWSSIITVTLFSIAVIVIDEIIHARRRKRRAPG
Ga0137415_100669612	3300028536	Vadose Zone Soil	MGLWESVIIVTVFSIGVIVIDEFMHARRRKRREREGAARVGH
Ga0308187_104040142	3300031114	Soil	MGLWESVIIVTVFSVIVIVADEIIHARRRKRREREGAVR
Ga0307469_106781422	3300031720	Hardwood Forest Soil	MGLWDSVIIVLVFSVAVIVADEIFHARRRRRREREHATHEGH
Ga0307469_110327231	3300031720	Hardwood Forest Soil	MTLWTSIITVTLFSIAVIVIDEIIHTRRRKRREREGGMRVGH
Ga0307469_124569331	3300031720	Hardwood Forest Soil	MGLWESVIIVTVFSIGVIVMDEIIHARRRKRREREGAARVGH
Ga0307468_1003661561	3300031740	Hardwood Forest Soil	MGLWESVIIVTVFSIVVIVADEFMHARRRKRREREGAVRVSH
Ga0214473_102113822	3300031949	Soil	MGLWESIIIVVLFSAGVIIMDEIIHARRRKRREREGAARVGH
Ga0214473_104099032	3300031949	Soil	MGLWESVIIVTVFSIVVIAADEYIHARRRKRRAREGAVRVSH
Ga0306922_112848461	3300032001	Soil	MTIPQMGLWESVIIVVAFSIFVVVADEYIHARRKRQHEREDAARRGH
Ga0307471_1027377542	3300032180	Hardwood Forest Soil	MGLWESVVIVVLFSIGVIVMDEVIHARRRKRREREGSH
Ga0335082_104487912	3300032782	Soil	VTIPQMSLWESVIIVVVFSIFVVVADEYIHARRRRRHEREDTARRAH
Ga0335070_101019592	3300032829	Soil	VTIPQMSLWESVSIVVVFSIFVVVADEYIHARRRRRHEREDTARRAH
Ga0335069_100254616	3300032893	Soil	VTIPQMSLWESVIIVLVFSIFVVVADEYIHARRRRKHEREDTARRAH
Ga0335069_118085831	3300032893	Soil	MTIPQMGLWESVIIVLAFSLFVIVADEYIHARRKRRHEREDAARRGH
Ga0326726_103765532	3300033433	Peat Soil	MGLWDSVVIVLVFSVAVIVADEIFHARRRRRREREQATHEGH
Ga0326726_113467242	3300033433	Peat Soil	MGLWESVAIVTLFSIGVIVMDEIIHARRRKRREREGTGH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F029826

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences