NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F029706

Metagenome Family F029706

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F029706
Family Type Metagenome
Number of Sequences 187
Average Sequence Length 46 residues
Representative Sequence MKYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILAKPATTQ
Number of Associated Samples 166
Number of Associated Scaffolds 187

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 98.40 %
% of genes near scaffold ends (potentially truncated) 99.47 %
% of genes from short scaffolds (< 2000 bps) 88.24 %
Associated GOLD sequencing projects 158
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (88.235 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(11.230 % of family members)
Environment Ontology (ENVO) Unclassified
(27.273 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(36.364 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 22.97%    β-sheet: 8.11%    Coil/Unstructured: 68.92%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 187 Family Scaffolds
PF00296Bac_luciferase 13.37
PF01596Methyltransf_3 10.16
PF01266DAO 9.63
PF04343DUF488 9.09
PF01264Chorismate_synt 5.35
PF00903Glyoxalase 3.74
PF03992ABM 3.74
PF02142MGS 3.74
PF07690MFS_1 2.14
PF02653BPD_transp_2 2.14
PF00326Peptidase_S9 2.14
PF04392ABC_sub_bind 2.14
PF08402TOBE_2 1.60
PF09723Zn-ribbon_8 1.60
PF02661Fic 1.07
PF00561Abhydrolase_1 1.07
PF10604Polyketide_cyc2 1.07
PF00355Rieske 1.07
PF00005ABC_tran 1.07
PF00892EamA 1.07
PF12695Abhydrolase_5 1.07
PF00300His_Phos_1 0.53
PF05544Pro_racemase 0.53
PF13823ADH_N_assoc 0.53
PF02310B12-binding 0.53
PF05360YiaAB 0.53
PF04909Amidohydro_2 0.53
PF02784Orn_Arg_deC_N 0.53
PF00154RecA 0.53
PF02776TPP_enzyme_N 0.53
PF06146PsiE 0.53
PF03404Mo-co_dimer 0.53
PF003892-Hacid_dh 0.53
PF028262-Hacid_dh_C 0.53
PF14579HHH_6 0.53
PF04454Linocin_M18 0.53
PF01738DLH 0.53
PF00583Acetyltransf_1 0.53
PF13489Methyltransf_23 0.53
PF03795YCII 0.53
PF11746DUF3303 0.53
PF13091PLDc_2 0.53
PF02627CMD 0.53
PF00072Response_reg 0.53

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 187 Family Scaffolds
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 13.37
COG4123tRNA1(Val) A37 N6-methylase TrmN6Translation, ribosomal structure and biogenesis [J] 10.16
COG4122tRNA 5-hydroxyU34 O-methylase TrmR/YrrMTranslation, ribosomal structure and biogenesis [J] 10.16
COG2518Protein-L-isoaspartate O-methyltransferasePosttranslational modification, protein turnover, chaperones [O] 10.16
COG3189Uncharacterized conserved protein YeaO, DUF488 familyFunction unknown [S] 9.09
COG0082Chorismate synthaseAmino acid transport and metabolism [E] 5.35
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 2.14
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.53
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.53
COG1166Arginine decarboxylase (spermidine biosynthesis)Amino acid transport and metabolism [E] 0.53
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.53
COG3223Phosphate starvation-inducible membrane PsiE (function unknown)General function prediction only [R] 0.53
COG3938Proline racemase/hydroxyproline epimeraseAmino acid transport and metabolism [E] 0.53
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 0.53
COG0019Diaminopimelate decarboxylaseAmino acid transport and metabolism [E] 0.53
COG4298Uncharacterized conserved protein, YiaAB domainFunction unknown [S] 0.53
COG4682Uncharacterized membrane protein YiaAFunction unknown [S] 0.53


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.24 %
UnclassifiedrootN/A11.76 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000559|F14TC_100074658All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300000891|JGI10214J12806_10296998All Organisms → cellular organisms → Bacteria2186Open in IMG/M
3300002558|JGI25385J37094_10012379All Organisms → cellular organisms → Bacteria3051Open in IMG/M
3300002561|JGI25384J37096_10064259All Organisms → cellular organisms → Bacteria → Proteobacteria1361Open in IMG/M
3300002912|JGI25386J43895_10000787All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia6941Open in IMG/M
3300003324|soilH2_10019475All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1554Open in IMG/M
3300004013|Ga0055465_10068722All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300004019|Ga0055439_10295328All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300004156|Ga0062589_100633405All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300004480|Ga0062592_101726098All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300005093|Ga0062594_100036591All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2337Open in IMG/M
3300005175|Ga0066673_10862409All Organisms → cellular organisms → Bacteria → Proteobacteria516Open in IMG/M
3300005178|Ga0066688_10020414All Organisms → cellular organisms → Bacteria3501Open in IMG/M
3300005180|Ga0066685_10367945All Organisms → cellular organisms → Bacteria → Proteobacteria998Open in IMG/M
3300005289|Ga0065704_10652458All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium582Open in IMG/M
3300005293|Ga0065715_11157902All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005332|Ga0066388_101750585All Organisms → cellular organisms → Bacteria1102Open in IMG/M
3300005339|Ga0070660_101742278All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300005364|Ga0070673_101366356All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria666Open in IMG/M
3300005439|Ga0070711_101644581All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300005451|Ga0066681_10437828All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium803Open in IMG/M
3300005458|Ga0070681_11503168All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300005467|Ga0070706_100292700All Organisms → cellular organisms → Bacteria1519Open in IMG/M
3300005468|Ga0070707_100198353All Organisms → cellular organisms → Bacteria1956Open in IMG/M
3300005545|Ga0070695_101667335All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300005546|Ga0070696_101605537All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300005552|Ga0066701_10002277All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales7086Open in IMG/M
3300005577|Ga0068857_100069902All Organisms → cellular organisms → Bacteria3126Open in IMG/M
3300005713|Ga0066905_101662388All Organisms → cellular organisms → Bacteria → Proteobacteria586Open in IMG/M
3300005937|Ga0081455_10926237All Organisms → cellular organisms → Bacteria → Proteobacteria541Open in IMG/M
3300006032|Ga0066696_10274679All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300006046|Ga0066652_100077684All Organisms → cellular organisms → Bacteria → Proteobacteria2610Open in IMG/M
3300006058|Ga0075432_10137103All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300006755|Ga0079222_10560301All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300006794|Ga0066658_10788369All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300006806|Ga0079220_10064155All Organisms → cellular organisms → Bacteria1785Open in IMG/M
3300006844|Ga0075428_100785034All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300006844|Ga0075428_102142095All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria578Open in IMG/M
3300006845|Ga0075421_101205709All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300006845|Ga0075421_102816289All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300006847|Ga0075431_101044238All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300006847|Ga0075431_101113650All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300006852|Ga0075433_11772317All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300006853|Ga0075420_100359014All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300006876|Ga0079217_11192805All Organisms → cellular organisms → Bacteria → Proteobacteria578Open in IMG/M
3300006880|Ga0075429_100819588All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300006880|Ga0075429_100865611All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300006904|Ga0075424_100286382All Organisms → cellular organisms → Bacteria1753Open in IMG/M
3300006904|Ga0075424_100535040All Organisms → cellular organisms → Bacteria → Proteobacteria1251Open in IMG/M
3300007076|Ga0075435_100143355All Organisms → cellular organisms → Bacteria2005Open in IMG/M
3300007076|Ga0075435_102034648All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300009012|Ga0066710_100138795All Organisms → cellular organisms → Bacteria3354Open in IMG/M
3300009012|Ga0066710_101214696All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300009012|Ga0066710_101766470All Organisms → cellular organisms → Bacteria → Proteobacteria936Open in IMG/M
3300009012|Ga0066710_103417654Not Available603Open in IMG/M
3300009012|Ga0066710_104199878All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300009089|Ga0099828_10478619All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300009090|Ga0099827_10299084All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1361Open in IMG/M
3300009094|Ga0111539_10830049All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1075Open in IMG/M
3300009137|Ga0066709_101959856All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium813Open in IMG/M
3300009137|Ga0066709_104453701All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium511Open in IMG/M
3300009147|Ga0114129_11252106All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300009148|Ga0105243_13103532All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300009444|Ga0114945_10388142All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria831Open in IMG/M
3300009538|Ga0129287_10585195All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300009814|Ga0105082_1027441All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300010046|Ga0126384_10603600All Organisms → cellular organisms → Bacteria → Proteobacteria961Open in IMG/M
3300010047|Ga0126382_11638869All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300010047|Ga0126382_12549071All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300010320|Ga0134109_10013787All Organisms → cellular organisms → Bacteria2381Open in IMG/M
3300010322|Ga0134084_10139536All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium807Open in IMG/M
3300010358|Ga0126370_11140562All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300010360|Ga0126372_12968462All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Azotobacter group → Azotobacter → Azotobacter beijerinckii526Open in IMG/M
3300010361|Ga0126378_10942035All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300010362|Ga0126377_10265706All Organisms → cellular organisms → Bacteria1677Open in IMG/M
3300010362|Ga0126377_10521701Not Available1222Open in IMG/M
3300010366|Ga0126379_11653969Not Available745Open in IMG/M
3300011119|Ga0105246_11324483All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300011429|Ga0137455_1062181Not Available1064Open in IMG/M
3300012164|Ga0137352_1097763All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300012189|Ga0137388_11042273All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria754Open in IMG/M
3300012199|Ga0137383_10980799Not Available616Open in IMG/M
3300012208|Ga0137376_10371550All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1242Open in IMG/M
3300012354|Ga0137366_10173485All Organisms → cellular organisms → Bacteria1619Open in IMG/M
3300012361|Ga0137360_10942949All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300012362|Ga0137361_11551126All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300012363|Ga0137390_10622959All Organisms → cellular organisms → Bacteria1045Open in IMG/M
3300012683|Ga0137398_11224768All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300012917|Ga0137395_10079211All Organisms → cellular organisms → Bacteria → Proteobacteria2140Open in IMG/M
3300012922|Ga0137394_11593619All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300012929|Ga0137404_11862909All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300012930|Ga0137407_11858611All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium574Open in IMG/M
3300012971|Ga0126369_13217599All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300012971|Ga0126369_13652090All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300013297|Ga0157378_12747418Not Available545Open in IMG/M
3300014255|Ga0075320_1026706All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300014326|Ga0157380_10548887All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1133Open in IMG/M
3300014885|Ga0180063_1122802Not Available806Open in IMG/M
3300017656|Ga0134112_10229604All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium732Open in IMG/M
3300017659|Ga0134083_10050853All Organisms → cellular organisms → Bacteria1560Open in IMG/M
3300017659|Ga0134083_10178100All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium870Open in IMG/M
3300017659|Ga0134083_10323576Not Available659Open in IMG/M
3300018028|Ga0184608_10146309All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300018031|Ga0184634_10474885All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300018076|Ga0184609_10202441All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300018089|Ga0187774_11289315All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria529Open in IMG/M
3300019377|Ga0190264_10605334Not Available783Open in IMG/M
3300019487|Ga0187893_10194622All Organisms → cellular organisms → Bacteria1568Open in IMG/M
3300019883|Ga0193725_1148850All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300019890|Ga0193728_1340007Not Available545Open in IMG/M
3300019998|Ga0193710_1019526All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300021073|Ga0210378_10204548Not Available753Open in IMG/M
3300021344|Ga0193719_10473771All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300022694|Ga0222623_10024983All Organisms → cellular organisms → Bacteria2249Open in IMG/M
3300024181|Ga0247693_1023464All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300025160|Ga0209109_10072829All Organisms → cellular organisms → Bacteria1796Open in IMG/M
3300025165|Ga0209108_10481207All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium598Open in IMG/M
3300025173|Ga0209824_10296389All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300025324|Ga0209640_11169756All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium580Open in IMG/M
3300025325|Ga0209341_10642309All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300025327|Ga0209751_10205409All Organisms → cellular organisms → Bacteria → Proteobacteria1686Open in IMG/M
3300025567|Ga0210076_1052591All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium882Open in IMG/M
3300025885|Ga0207653_10270671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria654Open in IMG/M
3300025907|Ga0207645_10909389Not Available598Open in IMG/M
3300025915|Ga0207693_10325891All Organisms → cellular organisms → Bacteria1202Open in IMG/M
3300025922|Ga0207646_10766955All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium860Open in IMG/M
3300025923|Ga0207681_10413479Not Available1091Open in IMG/M
3300025930|Ga0207701_10362830All Organisms → cellular organisms → Bacteria1251Open in IMG/M
3300025938|Ga0207704_10447516All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300025940|Ga0207691_10067836All Organisms → cellular organisms → Bacteria3224Open in IMG/M
3300025942|Ga0207689_10280190All Organisms → cellular organisms → Bacteria1381Open in IMG/M
3300025942|Ga0207689_11220993All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300026029|Ga0208002_1009863All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium918Open in IMG/M
3300026075|Ga0207708_10505859All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300026277|Ga0209350_1020309All Organisms → cellular organisms → Bacteria2051Open in IMG/M
3300026310|Ga0209239_1116253All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1115Open in IMG/M
3300026318|Ga0209471_1065805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1635Open in IMG/M
3300026507|Ga0257165_1043557Not Available800Open in IMG/M
3300026524|Ga0209690_1030668All Organisms → cellular organisms → Bacteria2587Open in IMG/M
3300026529|Ga0209806_1299425All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium540Open in IMG/M
3300026530|Ga0209807_1211274All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300026540|Ga0209376_1005752All Organisms → cellular organisms → Bacteria → Proteobacteria10190Open in IMG/M
3300026548|Ga0209161_10003369All Organisms → cellular organisms → Bacteria12913Open in IMG/M
3300026550|Ga0209474_10737102All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium513Open in IMG/M
3300026551|Ga0209648_10464123All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300027273|Ga0209886_1039916All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium727Open in IMG/M
3300027636|Ga0214469_1155098All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300027651|Ga0209217_1173329Not Available590Open in IMG/M
3300027655|Ga0209388_1135994All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium698Open in IMG/M
3300027846|Ga0209180_10581917Not Available620Open in IMG/M
3300027907|Ga0207428_10698920All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium725Open in IMG/M
3300027907|Ga0207428_10936288All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300027909|Ga0209382_10817816All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300027909|Ga0209382_11156181All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium795Open in IMG/M
3300027910|Ga0209583_10793973All Organisms → cellular organisms → Bacteria503Open in IMG/M
(restricted) 3300028043|Ga0233417_10080542All Organisms → cellular organisms → Bacteria1348Open in IMG/M
3300028380|Ga0268265_10153005All Organisms → cellular organisms → Bacteria1948Open in IMG/M
3300028592|Ga0247822_10780045All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium777Open in IMG/M
3300028673|Ga0257175_1004243Not Available1882Open in IMG/M
3300028792|Ga0307504_10419415Not Available530Open in IMG/M
3300028809|Ga0247824_10052089All Organisms → cellular organisms → Bacteria2115Open in IMG/M
3300030006|Ga0299907_10545119All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300030620|Ga0302046_10593971All Organisms → cellular organisms → Bacteria902Open in IMG/M
(restricted) 3300031197|Ga0255310_10127228Not Available693Open in IMG/M
3300031229|Ga0299913_11137611All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi742Open in IMG/M
(restricted) 3300031248|Ga0255312_1098876All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300031572|Ga0318515_10521294All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium → Janthinobacterium sp. CG3634Open in IMG/M
3300031716|Ga0310813_10092375All Organisms → cellular organisms → Bacteria2336Open in IMG/M
3300031720|Ga0307469_10419095All Organisms → cellular organisms → Bacteria1149Open in IMG/M
3300031740|Ga0307468_102281487All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300031820|Ga0307473_11045343All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Azotobacter group → Azotobacter → Azotobacter beijerinckii599Open in IMG/M
3300031859|Ga0318527_10047455All Organisms → cellular organisms → Bacteria → Proteobacteria1662Open in IMG/M
3300031903|Ga0307407_11454609All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium541Open in IMG/M
3300031911|Ga0307412_10555364All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria965Open in IMG/M
3300031943|Ga0310885_10395082All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300032000|Ga0310903_10576716All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300032017|Ga0310899_10697730All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Azotobacter group → Azotobacter → Azotobacter beijerinckii515Open in IMG/M
3300032094|Ga0318540_10298611All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300032122|Ga0310895_10394575Not Available676Open in IMG/M
3300032180|Ga0307471_102340657All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium → Janthinobacterium sp. CG3674Open in IMG/M
3300032205|Ga0307472_102200982All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Azotobacter group → Azotobacter → Azotobacter beijerinckii556Open in IMG/M
3300032205|Ga0307472_102246215All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300033550|Ga0247829_10043535All Organisms → cellular organisms → Bacteria3107Open in IMG/M
3300033550|Ga0247829_11372300Not Available584Open in IMG/M
3300033551|Ga0247830_10326079All Organisms → cellular organisms → Bacteria1182Open in IMG/M
3300033811|Ga0364924_135269Not Available575Open in IMG/M
3300034177|Ga0364932_0007865All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4011Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere11.23%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.02%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.95%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.21%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.21%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.60%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.60%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.60%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.07%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.07%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.07%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.07%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.07%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.07%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.07%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.07%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.07%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.07%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.07%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.53%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.53%
WastewaterEnvironmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater0.53%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.53%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.53%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.53%
Beach Aquifer PorewaterEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater0.53%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.53%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.53%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.53%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.53%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.53%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.53%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.53%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.53%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.53%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.53%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.53%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.53%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.53%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.53%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004013Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2EnvironmentalOpen in IMG/M
3300004019Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009538Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - H-2WEnvironmentalOpen in IMG/M
3300009814Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300012164Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014255Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300019998Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m1EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300024181Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34EnvironmentalOpen in IMG/M
3300025160Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2EnvironmentalOpen in IMG/M
3300025165Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1EnvironmentalOpen in IMG/M
3300025173Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water (SPAdes)EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025325Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025567Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026029Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026507Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-BEnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027273Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027636Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeqEnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300028043 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MGEnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300033811Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17EnvironmentalOpen in IMG/M
3300034177Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10007465813300000559SoilMKYGVVLPIWQLTVADAESLATKAEALGLDGVFVPDHILAKPA
JGI10214J12806_1029699843300000891SoilMKYGVVLPIWQLTVAEAESLATKAEALGLDGVFVPDHILAKP
JGI25385J37094_1001237943300002558Grasslands SoilMNYGVVLPIWQLTIADAESLTTRAEQLGLDGVFVPDHILAKPATTQHYG
JGI25384J37096_1006425913300002561Grasslands SoilMNYGVVLPIWQLTIADAESLTTRAEQLGLDGVFVPDHILAKP
JGI25386J43895_1000078713300002912Grasslands SoilMNYGVVLPIWQLTVAQAESLAARAEQLGLDGVFVPDHILAKPA
soilH2_1001947513300003324Sugarcane Root And Bulk SoilMKYGVVLPIWQLTIAEAESLAVRAEDAGLDGVFVPDHILAKPATTQH
Ga0055465_1006872213300004013Natural And Restored WetlandsMNYGIVLPIWQLSAAEAESLTVRAEELGLDGVFVPDHILAKPATTQHYGGHW
Ga0055439_1029532823300004019Natural And Restored WetlandsMKYGVVLPIWQLTVAEAETLATRAESLGLDGVFVPDHILAKPATTQHYG
Ga0062589_10063340513300004156SoilMNYGVVLPIWQLSAREAESLTVRAEALGLDGVFVPDHILAKP
Ga0062592_10172609823300004480SoilMKYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILAKPATTQHYGGHWPD
Ga0062594_10003659113300005093SoilMKYGVVLPIWQLTVAEAESLATRAEQLGLDGVFVPDHILAKPATTQHYGGHWP
Ga0066673_1086240913300005175SoilMNYGVVLPIWQLTIADAESLTTRAEQLGLDGVFVPDHILAKPATTQ
Ga0066688_1002041413300005178SoilMNYGVVLPIWQLTVAQAESLAARAEQLGLDGVFVPDNILAKPATTQHY
Ga0066685_1036794533300005180SoilMKLGVVLPIWQISVTDAEKLTLKAEELGLDGVFVPDHILAKPATTQHYGPS
Ga0065704_1065245813300005289Switchgrass RhizosphereMNYGVVLPIWQLTTADAESLTVRAEELGLDGVFVPDHILAK
Ga0065715_1115790213300005293Miscanthus RhizosphereMKYGVVLPIWQLTVAEAESLATKAEALGLDGVFVPDHILAKPAT
Ga0066388_10175058533300005332Tropical Forest SoilMKYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILAKP
Ga0070660_10174227823300005339Corn RhizosphereMKYGVVLPIWQLTVAEAESLATRAEQLGLDGVFVPDHILAKPATTQHYGGHWPD
Ga0070673_10136635613300005364Switchgrass RhizosphereMKYGVVLPIWQLTVAEAESLATRAEELGIDGVFVPDHILAK
Ga0070711_10164458113300005439Corn, Switchgrass And Miscanthus RhizosphereMKYGVILPIWQLTVAEAESLATKAETLGLDGVFVPDHILAKPATTQ
Ga0066681_1043782813300005451SoilMKFGAVLPIWQLTVGEAESLALRAEEVGLDGVFVPDHILAKPA
Ga0070681_1150316823300005458Corn RhizosphereMMYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILA
Ga0070706_10029270033300005467Corn, Switchgrass And Miscanthus RhizosphereMNYGVVLPIWQLTIAEAESLATRAESLGLDGVFVPDHILAKPATTQHY
Ga0070707_10019835313300005468Corn, Switchgrass And Miscanthus RhizosphereMNYGVVLPIWQLTIAEAESLATRAESLGLDGVFVPDHILAKPATT
Ga0070695_10166733513300005545Corn, Switchgrass And Miscanthus RhizosphereMKYGVILPIWQLSVRDAETLALRAEDLGLDGVFVPDHILAP
Ga0070696_10160553713300005546Corn, Switchgrass And Miscanthus RhizosphereMKYGVILPIWQLTVAEAESLATRAEALGLDGVFVPDHILAKPATTQHYGGHWPDPF
Ga0066701_10002277103300005552SoilMNYGVVLPIWQLTVADAESLTTRAEELGLDGVFVPDHILAKPATTQHYG
Ga0068857_10006990253300005577Corn RhizosphereMKYGVVLPIWQLTVAEAESLATKAEALGLDGVFVPDHILAKPATTQHYGGHWP
Ga0066905_10166238823300005713Tropical Forest SoilMKFGAVLPIWQLTVAEAETLTVRAEDLGLDGIFVPDHILAKPATTQHYG
Ga0081455_1092623723300005937Tabebuia Heterophylla RhizosphereMNYGVVLPIWQLTIAEAESLTARAEELGIDGVFVPDHILAKPAT
Ga0066696_1027467913300006032SoilMNYGVVLPIWQLTIAEAESLATRAESLGLDGVFVPDHILAKPATTQH
Ga0066652_10007768443300006046SoilMKLGVVLPIWQISVTDAEKLTLKAEELGLDGVFVPDHILAKPA
Ga0075432_1013710323300006058Populus RhizosphereMKYGVVLPIWQLTIAEAESLTTRAESLGLDGVFVPDHILAK
Ga0079222_1056030133300006755Agricultural SoilMKYGVVLPIWQLTVAEAESLATKAEALGLDGVFVPDHILAKPATTQHYGG
Ga0066658_1078836923300006794SoilMKYGVILPIWQLSVRDAETLSLKAEDLGLDGVFVPDHILAPPA
Ga0079220_1006415533300006806Agricultural SoilMKYGVVLPIWQLTIADAESLTMRAEALGLDGVFVPDHILAKPATTQHYGGHWPDPFALL
Ga0075428_10078503413300006844Populus RhizosphereMNYGVVLPIWQLTVADAEALTLRAEALGLDGVFVPDHILAKPATTQHYGGHWPDPFSLL
Ga0075428_10214209523300006844Populus RhizosphereMKYGVVLPIWQLTVAEAEALATRAEELGLDGVFVPDHILAK
Ga0075421_10120570913300006845Populus RhizosphereMNYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILAKPA
Ga0075421_10281628923300006845Populus RhizosphereMNYGVVLPIWQLTAREAESLTVRAEALGLDGVFVPDHILAKPATTQHYGGHWPD
Ga0075431_10104423823300006847Populus RhizosphereMNYGVVLPIWQLTIAEAESLALRTEELGLDGVFVPDHILAKPATTQHYG
Ga0075431_10111365033300006847Populus RhizosphereMKFGAVLPIWQLTMSEAETLALRAEEVGLDGVFVPDHILAKPATTQHYG
Ga0075433_1177231723300006852Populus RhizosphereMKLGVVLPIWQLTSGEAESLAVNADELGLDGVFVPDHILAKPATTQ
Ga0075420_10035901423300006853Populus RhizosphereMDYGVVLPIWQLTIADAEALTTHAEALGLDGVFVPDHILAKPATTQHYGGHWPDPF
Ga0079217_1119280513300006876Agricultural SoilMNYGVVLPIWQLTVADAASLTTRAEELGLDGVFVPDHILA
Ga0075429_10081958813300006880Populus RhizosphereMKYGVVLPIWQLTVAEAESLATKAEALGLDGVFVPDHILAKPATTQHYGGHW
Ga0075429_10086561113300006880Populus RhizosphereMNYGVVLPIWQLTVAEAESLTTRAEELGIDGVFVPDHILAKPATTQHYGGHWPDPFALL
Ga0075424_10028638213300006904Populus RhizosphereMNYGVVLPIWQLTAREAESLTVRAEALGLDGVFVP
Ga0075424_10053504043300006904Populus RhizosphereMHYGVVLPIWQLTIADAESLTVRAEELGLDGVFVPDHILAKPATTQHYGGHWPD
Ga0075435_10014335533300007076Populus RhizosphereMKYGVVLPIWQLTVAEAESLATKAEALGLDGVFVPDHILAKPATT
Ga0075435_10203464813300007076Populus RhizosphereMKYGVILPIWQLSVRDAETLALRAEALGLDGVFVPDHILAPPATTQHYGPNWPD
Ga0066710_10013879513300009012Grasslands SoilMNYGVVLPIWQLTIAEAESLATRAESLGLDGVFVPDHILAKPATTQHYG
Ga0066710_10121469613300009012Grasslands SoilMNYGVVLPIWQLTVAQAESLAARAEQLGLDGVFVPDHILAKPATTQHYGGHWPDPF
Ga0066710_10176647013300009012Grasslands SoilMNYGVVLAIWQLTIAEAEALTARAEELGIDGVFVPDHILAKPATTQHY
Ga0066710_10341765413300009012Grasslands SoilMKFGVVLPIWQLTIGEAESLTLRAEELGLDGIFVPDHILAKPA
Ga0066710_10419987813300009012Grasslands SoilMNYGVVLPIWQLTIAEAEALTARAEELGIDGVFVPDHILAKPATTQHY
Ga0099828_1047861953300009089Vadose Zone SoilMNYGVVLPIWQLTVTDAESLTTRAEELGLDGVFVPDHILAKPATTQHYGSHW
Ga0099827_1029908423300009090Vadose Zone SoilMNYGVVLPIWQLTIAEAESLTARAETLGLDGVFVPDH
Ga0111539_1083004913300009094Populus RhizosphereVVLPIWQLTAADAESLTVRAEELGLDGVFVPDHILAKPATTQHYG
Ga0066709_10195985613300009137Grasslands SoilMKFGVVLPIWQLTIGEAESLTLRAEELGLDGIFVPDHILAKPATTQHY
Ga0066709_10445370123300009137Grasslands SoilMKYGVVLPIWQLTIAEAESLAVKAEEAGLDGVFVPDHILA
Ga0114129_1125210633300009147Populus RhizosphereMKYGVILPIWQLTVAEAASLATRAEELGLDGVFVPDHILAKPA
Ga0105243_1310353223300009148Miscanthus RhizosphereMNYGVVLPIWQLTIAEAESLALKAEELGLDGVFVPDHILAKPA
Ga0114945_1038814223300009444Thermal SpringsMNFGVVLPIWQLTVADAESLTARAEELGLDGVFVPDHILAKPATSQHYGGHWP
Ga0129287_1058519523300009538Beach Aquifer PorewaterMNYGVVLPIWQLTVAEAESLTVRAEELGLDGVFVPDHILAKPATTQHYGGH
Ga0105082_102744113300009814Groundwater SandMKYGVVLPIWQLSIREAETLALKAEEVGLDGVFVPDHI
Ga0126384_1060360033300010046Tropical Forest SoilMKYGVILPIWQLSVRDAETLALRAEALGLDGVFVPDHILAPPA
Ga0126382_1163886913300010047Tropical Forest SoilMKFGVVLPIWQLTVGEAESLAVRAEELGVDGVFVPDH
Ga0126382_1254907123300010047Tropical Forest SoilMKYGVVLPIWQLTIADAEALTLKAEELGLDGVFVPDHILA
Ga0134109_1001378713300010320Grasslands SoilMNYGVVLPIWQLTIADAESLTTRAEQLGLDGVLVPDHILAKPATTQH
Ga0134084_1013953613300010322Grasslands SoilMNYGVVLPIWQLTIADAESLTARAEQLGLDGVFVPDHILAKPATTQHYG
Ga0126370_1114056223300010358Tropical Forest SoilMKYGVILPIWQLSVRDAEALALRAEDLGLDGVFVPDHILAPPATTQPYGRNWPDPF*
Ga0126372_1296846213300010360Tropical Forest SoilMKYGVILPIWQLSVRDAETLALRAEDLGLDGVFVPDHILAPPATTQHY
Ga0126378_1094203523300010361Tropical Forest SoilMNYGVVLPIWQLSVAEAESLTMRAEELGIDGVFVPDHILAKPATTQH
Ga0126377_1026570613300010362Tropical Forest SoilMKYGVVLPIWQLTVADAESLATKAEALGLDGVFVPDHILAKPAT
Ga0126377_1052170113300010362Tropical Forest SoilMKFGAVLPIWQLTMAEAESLTLRAEEVGLDAVFVPDHILAKP
Ga0126379_1165396923300010366Tropical Forest SoilMKFGAVLPIWQLTMSEAEALALRAEEVGLDGVFVPDHILAKPATTQ
Ga0105246_1132448323300011119Miscanthus RhizosphereMAMKYGVVLPIWQLTVAEAESLATRAEELGIDGVFVPDHILAKPATTQHYGGHWPD
Ga0137455_106218113300011429SoilMKYGVVLPIWQLTVAEAESLATRAEELGLDGVFVP
Ga0137352_109776323300012164SoilMKYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILA
Ga0137388_1104227313300012189Vadose Zone SoilMNYGVVLPIWQLSVAEAESLAVRAEALGLAGVFVPDHILAKPATTQHYGG
Ga0137383_1098079923300012199Vadose Zone SoilMKYGVVLPIWQLTVAEAESLATRAEALGLDGVFVPDHILAKP
Ga0137376_1037155023300012208Vadose Zone SoilMNYGVFLPIWQLTIAEAESLTARAEALGLDGVFVPDHILA
Ga0137366_1017348543300012354Vadose Zone SoilMKFGVVLPIWQLTIGEAESLTLRAEELGLDGIFVPDHILAKPATT
Ga0137360_1094294933300012361Vadose Zone SoilMKYGVVLPIWQLTVAEAESLATRAEALGLDGVFVPDHILAKPATT
Ga0137361_1155112623300012362Vadose Zone SoilMKYGVIVPIWQLSVRDAETLALRAEDLGLDGVFVPDHILA
Ga0137390_1062295913300012363Vadose Zone SoilMNYGVVLPIWQLTVGQAEALTARAEELGLEGVFVP
Ga0137398_1122476813300012683Vadose Zone SoilMKYGVVLPIWQLTVTEAESLATKAEALGLDGVFVPDHILAKPATTQHYGGHWP
Ga0137395_1007921113300012917Vadose Zone SoilMKYGVILPIWQLSVRDAETLALRAEDLGLDGVFVPDHILAPPATTQHYGPNWPD
Ga0137394_1159361913300012922Vadose Zone SoilMKLGVVLPIWQLSVTDAEKLTLKAEELGLDGVFVPDHILAKP
Ga0137404_1186290913300012929Vadose Zone SoilMNYGVVLPIWQLTVADAESLTTRAEELGLDGVFVPDHILAKPATTQHYGGHW
Ga0137407_1185861123300012930Vadose Zone SoilMNYGVVLPIWQLTVAEAESLTTRAEELGLDAVFVPDHILAKPATTQH
Ga0126369_1321759923300012971Tropical Forest SoilMKLGAIIPIWQLTIAEAEEITVASEGLGLDAVFVPDHILAKPATTQHYGPHWPDPFSL
Ga0126369_1365209023300012971Tropical Forest SoilMKYGVVLPIWQLTITEAESLALKAETLGLDRVFVPDHILAKPATTEHYGGHWP
Ga0157378_1274741823300013297Miscanthus RhizosphereMKYGVVLPIWQLTVAEAESLATKAEALGLDGVFVPDHILAKPATTQHYGGHWPDP
Ga0075320_102670633300014255Natural And Restored WetlandsMNYGVVLPIWQLTVAEAESLATRAEELGLDGVFVP
Ga0157380_1054888713300014326Switchgrass RhizosphereMKYGVILPIWQLSVRDAETLALRAEDLGLDGVFVPDHILAPPATTQHYGPNWPDPF
Ga0180063_112280213300014885SoilMKFGAVLPIWQLTVAEAEILAVRAEDLGLDGVFVPDHILAKPATTQHYGPHWPDPFA
Ga0134112_1022960423300017656Grasslands SoilMNYGVVLPIWQLTIAEAESLATRAESLGLDGVFVPDHIL
Ga0134083_1005085323300017659Grasslands SoilMKFGVVLPIWQLTIGEAESLTLRAEEVGLDAVFVPDHILAKPATT
Ga0134083_1017810013300017659Grasslands SoilMNYGVVLPIWQLTVAEAESLAVRAEELGLDGVFVPDHILAKPATTQHY
Ga0134083_1032357613300017659Grasslands SoilMKFGAVLPIWQLTVAEAESLTLRAEELGLDGVFVPDHILAKPATTQHY
Ga0184608_1014630943300018028Groundwater SedimentMKYGVILPIWQLTVAEAASLATRAEELGLDGVFVPDHILAKP
Ga0184634_1047488513300018031Groundwater SedimentVKYGVVLPIWQLTIAEAESLTTRAEELGLDGVFVPDHILAKPATTQHYGGHWPD
Ga0184609_1020244133300018076Groundwater SedimentMKYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILAKPATTQ
Ga0187774_1128931523300018089Tropical PeatlandMQFGVVLPIWQLTVSEAESLTLHAEEIGLDGVFVPDHILAKPATIEHYGAHWPDPFSLL
Ga0190264_1060533423300019377SoilMKYGVVLPIWQLTIAEAESLATRAEELGLDGVFVPDHILAKPATT
Ga0187893_1019462213300019487Microbial Mat On RocksMKYGVVLPIWQLTVAEAESLATRAETLGLDGVFVPDHILAKPATTQHYG
Ga0193725_114885013300019883SoilMKYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILAKPAT
Ga0193728_134000723300019890SoilMKYGVVLPIWQLTVAEAESLATKAEALGLDGVFVPD
Ga0193710_101952613300019998SoilMKYGVVLPIWQLTVADAASLATRAEELGLDGVFVPDHILAKP
Ga0210378_1020454813300021073Groundwater SedimentMKYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPD
Ga0193719_1047377113300021344SoilMKYGVILPIWQLTVAEAASLATRAEELGLDGVFVPDHI
Ga0222623_1002498313300022694Groundwater SedimentMNYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILAKPATT
Ga0247693_102346423300024181SoilMKYGVILPIWQLSVREAETLALRAEDLGLDGVFVPDHILAPPATTQHYGPN
Ga0209109_1007282913300025160SoilMKYGVVLPIWQLTVAEAESLATRAEALGLDTGIFNACFD
Ga0209108_1048120723300025165SoilMNYGVVLPIWQLTVAEAESLAARAEELGLDGVFVPDHILAKPATTQ
Ga0209824_1029638923300025173WastewaterMNYGVVLPIWQLTVTEAESLTVRAEELGLDGVFVPDHILAKPATTQHYGGHWPDPFSLL
Ga0209640_1116975623300025324SoilMNYGIVLPIWQLTAAEEESLAVRAEELGLDGVFVPDHILAK
Ga0209341_1064230933300025325SoilMNYGVVLPIWQLTVAEAEALAVRAEALGLDGVFVPDHILAKPATTQHYGGHW
Ga0209751_1020540913300025327SoilMNYGVVLPIWQLTVAEADSLAARAEELGLDGVFVPDHILAKPATTQHYGGHWPD
Ga0210076_105259113300025567Natural And Restored WetlandsMNYGIVLPIWQLSAAEAESLTVRAEELGLDGVFVPDHILAKPATTQH
Ga0207653_1027067113300025885Corn, Switchgrass And Miscanthus RhizosphereMKYGVVLPIWQLTVAEAESLATRAEQLGLDGVFVPDHIL
Ga0207645_1090938913300025907Miscanthus RhizosphereMKYGVVLPIWQLTVADAESLATKAEALGLDGVFVPDHILAKPATTQ
Ga0207693_1032589113300025915Corn, Switchgrass And Miscanthus RhizosphereMKYGVILPIWQLTVAEAESLATRAEALGLDGVFVP
Ga0207646_1076695513300025922Corn, Switchgrass And Miscanthus RhizosphereMNYGVVLPIWQLTIAEAESLATRAESLGLDGVFVPDHILA
Ga0207681_1041347923300025923Switchgrass RhizosphereMKYGVVLPIWQLTIAEAESLALKAEELGLDGVFVPDHILAKPATT
Ga0207701_1036283033300025930Corn, Switchgrass And Miscanthus RhizosphereMKYGVVLPIWQLTVAEAESLATRAEELGLDGGFVPDH
Ga0207704_1044751613300025938Miscanthus RhizosphereMKYGVVLPIWQLTVAEAESLATKAEALGLDGVFVPDHILAKPATTQHYGGHWPDPFS
Ga0207691_1006783613300025940Miscanthus RhizosphereMKYGVVLPIWQLTVAEAESLATKAEALGLDGVFVPDHILAKPATTQ
Ga0207689_1028019053300025942Miscanthus RhizosphereMKYGVVLPIWQLTVAEAESLATRAEQLGLDGVFVPDHILAKPATTQHYGGH
Ga0207689_1122099313300025942Miscanthus RhizosphereMKYGVILPIWQLSVRDAETLALRAEDLGLDGVFVPDHILAPPATTQPYG
Ga0208002_100986313300026029Natural And Restored WetlandsMNYGIVLPIWQLSAAEAESLTVRAEELGLDGVFVPDHILAKPATTQHYGGHWPD
Ga0207708_1050585933300026075Corn, Switchgrass And Miscanthus RhizosphereMKYGVVLPIWQLTVAEAESLATKAEALGLDGVFVPDHIL
Ga0209350_102030913300026277Grasslands SoilMNYGVVLPIWQLTIADAESLTTRAEQLGLDGVFVPDHILAKPA
Ga0209239_111625323300026310Grasslands SoilMNYGVVLPIWQLTVAQAESLAARAEQLGLDGVFVPDHILA
Ga0209471_106580533300026318SoilMNYGVVLPIWQLTIADAESLTARAEQLGLDGVFVPDHILAKPAT
Ga0257165_104355733300026507SoilMKYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILAKPATTQHYGGH
Ga0209690_103066833300026524SoilMNYGVVLPIWQLTIADAESLTTRAEQLGLDGVFVPDHILA
Ga0209806_129942523300026529SoilMNYGVVLPIWQLTIADAESLTARAEQLGLDGVFVPDHILAKPATTQHYGGHWPDPFSL
Ga0209807_121127413300026530SoilMKLGVVLPIWQISVTDAEKLTLKAEELGLDGVFVPDHI
Ga0209376_1005752103300026540SoilMKYGVILPIWQLSVRDAETLSLKAEDLGLDGVFVPDHILAPPATTQHYGPNWPDPF
Ga0209161_10003369173300026548SoilMNYGVVLPIWQLTVADAESLTTRAEALGLDGVFVPDHILAKPATTQHYGGHWPDPFALLA
Ga0209474_1073710223300026550SoilMNYGVVLPIWQLTVADAESLAMRAESLGLDGVFVPDHI
Ga0209648_1046412313300026551Grasslands SoilMKYGVVLPIWQLTVAEAESLATRAEALGLDGVFVPDHILAKPATTQHYGGHWPD
Ga0209886_103991623300027273Groundwater SandMNYGVVLPIWQLTIAEAESLTARADQLGLDGVFVPDHILAKPATTQRYGG
Ga0214469_115509813300027636SoilMQYGVVLPIWQLTVAEAETLATRAEELGLDGVFVPDHILAKPATMQHYGGHWP
Ga0209217_117332913300027651Forest SoilMKYGVILPIWQLTVAEAESLATRAEALGLDGVFVPDHIL
Ga0209388_113599413300027655Vadose Zone SoilMNYGVVLPIWQLTIADAESLTSRAEQLGLDGVFVPDHILAKP
Ga0209180_1058191723300027846Vadose Zone SoilMKYGVVLPIWQLTVAEAESLATRAEALGLDGVFVPDHILAKPAT
Ga0207428_1069892023300027907Populus RhizosphereMQYGVVLPIWQLTVADAEALTTRAEALGLDAVFVPDHILAKPATTQHYGG
Ga0207428_1093628813300027907Populus RhizosphereVKYGVVLPIWQLTIAEAESLAVRAEELGLDGVFVPDHILAKPATTQHYGGHWPDPFS
Ga0209382_1081781613300027909Populus RhizosphereMNYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILASPPQ
Ga0209382_1115618113300027909Populus RhizosphereMNYGVVLPIWQLTTADAESLTVRAEELGLDGVFVPDHILAKPATTQHYGGHWPDP
Ga0209583_1079397323300027910WatershedsMKYGVVLPIWQLTVAEAASLATRAEELGLDGVFVPDHILAKPAT
(restricted) Ga0233417_1008054213300028043SedimentMKYGVVLPIWQLTVADAESLATRAEELGLDGVFVPDHILAKPATTQHYG
Ga0268265_1015300543300028380Switchgrass RhizosphereMKYGVILPIWQLSVRDAETLALRAEDLGLDGVFVPDHIL
Ga0247822_1078004513300028592SoilMNYGVVLPIWQLTTADAESLTVRAEELGLDGVFVPDHILAKPATTQHY
Ga0257175_100424313300028673SoilMKYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILAKPATTQHYGGHWPDP
Ga0307504_1041941523300028792SoilMKYGVVLPIWQLTVTEAESLAIQAEAVGLDGVFVPDHILAKPATTQHYGGHWPDPYS
Ga0247824_1005208943300028809SoilMNYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHI
Ga0299907_1054511933300030006SoilMQYGVVLPIWQLTVAEAETLATRAEELGLDGVFVPDHILAKPATM
Ga0302046_1059397133300030620SoilMKYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHI
(restricted) Ga0255310_1012722813300031197Sandy SoilMKYGVVLPIWQLTIAEAESLAVRAEQVGVDGVFVPDHILAKPATTE
Ga0299913_1113761113300031229SoilMKYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILAKPATTQHYGGHWPDPF
(restricted) Ga0255312_109887613300031248Sandy SoilMKYGVVLPIWQLTIAEAESLAVRAEQVGVDGVFVPDHILAKPATTEHYGGHWPDPFAFL
Ga0318515_1052129413300031572SoilMKYGVILPIWQLSVRDAETLALRAEDLGLDGVFVPDHILAPPATTQHYGPNWP
Ga0310813_1009237533300031716SoilMKYGVVLPIWQLTIAEAESLTLRAETLGLDGVFVPDHILAKPATTQHYGGHW
Ga0307469_1041909513300031720Hardwood Forest SoilMKYGVVLPIWQLTVAEAESLATKAESLGLDGVFVPDHILAKPATTQHYGGNWPDPFS
Ga0307468_10228148713300031740Hardwood Forest SoilMKYGVILPIWQLSVRDAETLALRAEDLGVDGVFVPDHILAPPATTQHY
Ga0307473_1104534323300031820Hardwood Forest SoilMKYGVILPIWQLSVRDAETLALRAEALGLDGVFVPDHILAPPATTQHYGPNW
Ga0318527_1004745533300031859SoilMKYGVILPIWQLSVRDAETLALRAEDLGLDGVFVPDHILAPP
Ga0307407_1145460923300031903RhizosphereMNYGIVLPIWQLSAAEAESLTVRAEQLGLDGVFVPDHILAKPATTQHYGGHW
Ga0307412_1055536413300031911RhizosphereMKYGVVLPIWQLTIAEAESLTTRAEALGLDGVFVPDHILA
Ga0310885_1039508223300031943SoilMKYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILAKPATTQH
Ga0310903_1057671623300032000SoilMKYGVVLPIWQLTIAEAESLATRAESLGLDGVFVPDHILAKPATTQHYGG
Ga0310899_1069773013300032017SoilMKYGVILPIWQLSVRDAETLALRAEDLGLDGVFVPDHILAPPATTQH
Ga0318540_1029861113300032094SoilMKYGVILPIWQLSVRDAETLALRAEDLGLDGVFVPDHILA
Ga0310895_1039457523300032122SoilMNYGVVLPIWQLTIAEAESLTMKAEELGLDGVFVPD
Ga0307471_10234065713300032180Hardwood Forest SoilMKYGVILPIWQLSVRDAETLALRAEALGLDGVFVPDHILAPPATTQ
Ga0307472_10220098213300032205Hardwood Forest SoilMKYGVVLPIWQLSVRDAETLALRAEDLGLDGVFVPDHILAPPLT
Ga0307472_10224621523300032205Hardwood Forest SoilMKYGVVLPIWQLTVAEAASLATRAEELGLDGVFVPDHILAKPATTQHYGGHWP
Ga0247829_1004353543300033550SoilMNYGVVLPIWQLTVAEAESLATRAEELGLDGVFVPDHILAKPATTQHGGDDPVLSR
Ga0247829_1137230023300033550SoilMKYGVVLPIWQLTVAEAESLATKAEALGLDGVFVPDHILAKPATTQHY
Ga0247830_1032607913300033551SoilMKYGVVLPIWQLTVAEAESLATKAEALGLDGVFVPDHILAKPATTQHYGGHWPD
Ga0364924_135269_446_5743300033811SedimentMNYGVVLPIWQLTIAEAESLTARAEALGLDGVFVPDHILAKPA
Ga0364932_0007865_3906_40103300034177SedimentMGGEETRMNYGVVLPIWQLTIAEAEALTVRAEALG


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