Metagenome / Metatranscriptome Family F029537

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F029537
Family Type	Metagenome / Metatranscriptome
Number of Sequences	188
Average Sequence Length	42 residues
Representative Sequence	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVDALEPG
Number of Associated Samples	152
Number of Associated Scaffolds	188

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.24 %
% of genes near scaffold ends (potentially truncated)	99.47 %
% of genes from short scaffolds (< 2000 bps)	93.09 %
Associated GOLD sequencing projects	145
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.404 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.404 % of family members)
Environment Ontology (ENVO)	Unclassified (26.064 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.936 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.46% β-sheet: 0.00% Coil/Unstructured: 61.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 188 Family Scaffolds
PF03641	Lysine_decarbox	58.51
PF02113	Peptidase_S13	36.70
PF13191	AAA_16	0.53
PF12698	ABC2_membrane_3	0.53
PF04366	Ysc84	0.53
PF04389	Peptidase_M28	0.53
PF00440	TetR_N	0.53
PF00529	CusB_dom_1	0.53

COG ID	Name	Functional Category	% Frequency in 188 Family Scaffolds
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	58.51
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	36.70
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.94 %
Unclassified	root	N/A	1.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.40 %
Unclassified	root	N/A	1.06 %
Viruses	superkingdom	All Organisms → Viruses	0.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.40 %
Unclassified	root	N/A	1.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	44.68 %
Unclassified	root	N/A	1.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	42.02 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.13 %
Unclassified	root	N/A	1.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.96 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.06 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1.06 %
Unclassified	root	N/A	1.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.06 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1.06 %
Unclassified	root	N/A	1.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_106277920	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300001471\|JGI12712J15308_10129200	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	647	Open in IMG/M
3300001593\|JGI12635J15846_10527758	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300001867\|JGI12627J18819_10389826	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300002245\|JGIcombinedJ26739_101537778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300002908\|JGI25382J43887_10314863	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300002916\|JGI25389J43894_1043045	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300004080\|Ga0062385_10433433	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300004080\|Ga0062385_10774645	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300004091\|Ga0062387_100211001	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300004091\|Ga0062387_101639546	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005180\|Ga0066685_10563997	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005439\|Ga0070711_100731447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300005536\|Ga0070697_100862706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300005542\|Ga0070732_10836998	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005547\|Ga0070693_100005354	All Organisms → cellular organisms → Bacteria	6152	Open in IMG/M
3300005555\|Ga0066692_10330543	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300005566\|Ga0066693_10181790	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300005921\|Ga0070766_10301506	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300005921\|Ga0070766_10868369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300006172\|Ga0075018_10496935	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300006172\|Ga0075018_10529829	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300006796\|Ga0066665_11699842	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300006854\|Ga0075425_101419077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300006954\|Ga0079219_10269203	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300007788\|Ga0099795_10534035	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300009038\|Ga0099829_10479802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300009088\|Ga0099830_11613019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300009089\|Ga0099828_10241207	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300009089\|Ga0099828_10462454	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300009143\|Ga0099792_10590784	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300009792\|Ga0126374_10587937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300010322\|Ga0134084_10047044	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300010337\|Ga0134062_10043476	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300010361\|Ga0126378_12128452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300010362\|Ga0126377_12992648	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300010362\|Ga0126377_13603199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300010366\|Ga0126379_10465887	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300010366\|Ga0126379_10874312	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300010379\|Ga0136449_100736938	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300011270\|Ga0137391_10247905	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300011270\|Ga0137391_10335613	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300011271\|Ga0137393_10090538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2479	Open in IMG/M
3300011271\|Ga0137393_10181331	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300011271\|Ga0137393_10469018	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300012096\|Ga0137389_10457380	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300012096\|Ga0137389_10676885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300012189\|Ga0137388_10086984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2651	Open in IMG/M
3300012189\|Ga0137388_10341839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1378	Open in IMG/M
3300012202\|Ga0137363_10810613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300012205\|Ga0137362_10339221	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300012206\|Ga0137380_10590575	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300012211\|Ga0137377_10165791	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300012349\|Ga0137387_10769537	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012351\|Ga0137386_10428244	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300012351\|Ga0137386_10685817	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300012361\|Ga0137360_10941257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300012361\|Ga0137360_11436685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300012363\|Ga0137390_10290890	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300012363\|Ga0137390_10520844	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300012363\|Ga0137390_10597721	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300012683\|Ga0137398_10237372	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300012683\|Ga0137398_10557246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300012685\|Ga0137397_10306211	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300012922\|Ga0137394_10191270	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300012924\|Ga0137413_10602079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300012930\|Ga0137407_11891934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300012977\|Ga0134087_10094725	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300014157\|Ga0134078_10385484	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300016341\|Ga0182035_11897149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300016371\|Ga0182034_10807793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300016387\|Ga0182040_10037032	All Organisms → cellular organisms → Bacteria	2921	Open in IMG/M
3300016404\|Ga0182037_12118015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300017654\|Ga0134069_1293274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300017659\|Ga0134083_10525531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300017933\|Ga0187801_10003643	All Organisms → cellular organisms → Bacteria	4809	Open in IMG/M
3300017934\|Ga0187803_10470007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300017942\|Ga0187808_10328928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300017944\|Ga0187786_10108976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300017955\|Ga0187817_10004687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7400	Open in IMG/M
3300017961\|Ga0187778_10324714	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300017966\|Ga0187776_11007390	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300017975\|Ga0187782_10894143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300017994\|Ga0187822_10132751	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300017995\|Ga0187816_10576014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300018006\|Ga0187804_10305509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300018034\|Ga0187863_10690389	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300018062\|Ga0187784_11003993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300018090\|Ga0187770_10797743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300018090\|Ga0187770_11106141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300018090\|Ga0187770_11762097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300018468\|Ga0066662_10185799	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300018468\|Ga0066662_11096592	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300019789\|Ga0137408_1197233	All Organisms → cellular organisms → Bacteria	2360	Open in IMG/M
3300020170\|Ga0179594_10366062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300020199\|Ga0179592_10115884	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300020199\|Ga0179592_10381128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300020199\|Ga0179592_10486311	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300020579\|Ga0210407_10543955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300020580\|Ga0210403_11001111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300020581\|Ga0210399_10831814	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300020581\|Ga0210399_11367031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300021046\|Ga0215015_10956804	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300021088\|Ga0210404_10401021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300021168\|Ga0210406_10434155	All Organisms → Viruses → Predicted Viral	1047	Open in IMG/M
3300021168\|Ga0210406_10489767	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300021170\|Ga0210400_10416809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1108	Open in IMG/M
3300021170\|Ga0210400_10454174	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300021178\|Ga0210408_10162140	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300021180\|Ga0210396_10266893	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300021404\|Ga0210389_10193797	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300021406\|Ga0210386_11708727	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300021420\|Ga0210394_11779160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300021432\|Ga0210384_11810019	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300021433\|Ga0210391_11195140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300021475\|Ga0210392_11271051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300021478\|Ga0210402_10574795	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300021478\|Ga0210402_11726465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300021479\|Ga0210410_11840763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300023250\|Ga0224544_1053321	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300024290\|Ga0247667_1098580	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300025441\|Ga0208456_1064108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300025900\|Ga0207710_10105077	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300025905\|Ga0207685_10037428	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300025915\|Ga0207693_10466964	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300025915\|Ga0207693_10818518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300025939\|Ga0207665_10923634	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300026310\|Ga0209239_1175136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300026334\|Ga0209377_1337830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300026508\|Ga0257161_1143737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300026551\|Ga0209648_10498715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300027502\|Ga0209622_1072350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300027527\|Ga0209684_1026115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300027587\|Ga0209220_1123910	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300027590\|Ga0209116_1044582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300027643\|Ga0209076_1007970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2636	Open in IMG/M
3300027643\|Ga0209076_1172042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300027826\|Ga0209060_10360304	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300027842\|Ga0209580_10116698	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300027846\|Ga0209180_10258908	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300027846\|Ga0209180_10801726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300027874\|Ga0209465_10475075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300027882\|Ga0209590_10958065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300027884\|Ga0209275_10475601	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300028795\|Ga0302227_10260317	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300028806\|Ga0302221_10539095	Not Available	509	Open in IMG/M
3300028906\|Ga0308309_10511787	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300028906\|Ga0308309_10912061	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300028906\|Ga0308309_10921139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300028906\|Ga0308309_10962396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300029910\|Ga0311369_10987785	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300030013\|Ga0302178_10362321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300030399\|Ga0311353_10759309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300030490\|Ga0302184_10203960	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300030739\|Ga0302311_10507486	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300030763\|Ga0265763_1057336	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300030991\|Ga0073994_10069485	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300031128\|Ga0170823_11697390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300031543\|Ga0318516_10232456	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300031561\|Ga0318528_10758368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300031572\|Ga0318515_10404269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300031668\|Ga0318542_10085956	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300031718\|Ga0307474_10199157	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300031720\|Ga0307469_10338278	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300031753\|Ga0307477_10930302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300031777\|Ga0318543_10394420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300031794\|Ga0318503_10185763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300031796\|Ga0318576_10009580	All Organisms → cellular organisms → Bacteria	3523	Open in IMG/M
3300031796\|Ga0318576_10048429	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300031796\|Ga0318576_10398151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300031798\|Ga0318523_10199978	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300031820\|Ga0307473_11106471	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031820\|Ga0307473_11301734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300031833\|Ga0310917_10774692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300031879\|Ga0306919_10436851	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300031910\|Ga0306923_12521923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300031962\|Ga0307479_10940303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300031962\|Ga0307479_11780131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300032001\|Ga0306922_11353690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300032059\|Ga0318533_10250226	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300032063\|Ga0318504_10134383	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300032174\|Ga0307470_10285448	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300032180\|Ga0307471_102721222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300032782\|Ga0335082_10576214	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300032783\|Ga0335079_10061082	All Organisms → cellular organisms → Bacteria	4296	Open in IMG/M
3300032805\|Ga0335078_10085562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4584	Open in IMG/M
3300033480\|Ga0316620_10214143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1618	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.94%
Host-Associated	Host-Associated	1.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.96%
Aquatic	Environmental → Aquatic	7.98%
Plants	Host-Associated → Plants	1.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.70%
Freshwater	Environmental → Aquatic → Freshwater	6.91%
Peat	Environmental → Terrestrial → Peat	4.26%
Sediment	Environmental → Aquatic → Sediment	1.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.06%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.09%
Loam	Environmental → Terrestrial → Soil → Loam	12.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.06%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.26%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.06%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.53%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.15%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.26%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.72%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.19%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.13%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.06%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.53%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.53%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.53%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.53%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025441	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1062779201	3300000955	Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGQRTVKALEPGTN
JGI12712J15308_101292002	3300001471	Forest Soil	MSRTAEEVLEFDKLRELLRLRTTSAPGRRAVDALEFGTDRAAL
JGI12635J15846_105277581	3300001593	Forest Soil	MSRTAQDVLEFDKLLELLRQRTTCAPGRRFVDGLRPGMDR
JGI12627J18819_103898261	3300001867	Forest Soil	MSRTAQDVLEFDKLRELLRLRTTCVPGRRSVDALEPGTDREALDAAFAQ
JGIcombinedJ26739_1015377782	3300002245	Forest Soil	MSRTALDVLEFDKLLELLRQRTTCAPGRRFVDDLQ
JGI25382J43887_103148631	3300002908	Grasslands Soil	MSRTVQDVLEFDKLRELLRLRTTCAPGRRAVNDLEPRMDR
JGI25389J43894_10430452	3300002916	Grasslands Soil	MSRTAEEILEFEKLRELLRGRSTCAPGKRALDALQFSRDRAQLEK
Ga0062385_104334332	3300004080	Bog Forest Soil	MSRTAQDLLEFDKLRELLRLRTTCVPGRRAVDALEPGTDRE
Ga0062385_107746451	3300004080	Bog Forest Soil	MSRTAQDVLEFDKLRELLRLRTTCVPGRRAIDALEFGTDRA
Ga0062387_1002110011	3300004091	Bog Forest Soil	MSRSAQTVLEFDKLRELLRLRTTCVSGRRFIDVLEPGNERENLERSFALIR
Ga0062387_1016395462	3300004091	Bog Forest Soil	MSRRAEEVLEFDKLRDLLRQRTTCVPGRRFIDELNPTQDRKALENAFAQIKEAR
Ga0066685_105639971	3300005180	Soil	MARTAQEVLEFDKLRELLRLRTTCAPGRRAVDALEPGTNRAAL
Ga0070711_1007314471	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGHPKRRKTMSRSTQEVLEFDKLRELLRLRTTCVPGRRAVEALDF
Ga0070697_1008627063	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MARTALDVLEFDKLRELLRLRTTCAPGKRALDSLEFGGDQSSL
Ga0070732_108369982	3300005542	Surface Soil	MARSAQDVLEFDKLRELLRLRTTCAPGKRAAEALEPSTDRSALEGAF
Ga0070693_1000053547	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MARTALDVLEFDKLRELLRLRTTCAPGKRALDSLEFGGDQSSLEKSFAA
Ga0066692_103305433	3300005555	Soil	MPRTAEEILEFDKLRDILRRRTTCAPGRRAVDALGPSRDRARLEA
Ga0066693_101817903	3300005566	Soil	MTRTAEDLLEFDKLRELLRLRTTCAPGRRAVNGLEPGMERAALESAF
Ga0070766_103015061	3300005921	Soil	MSRTAQDVLEFDKLRELLRRKTTCVPGRRAVNALAFSTDRATLDAGN
Ga0070766_108683692	3300005921	Soil	MSRTTQEVLEFDKLRELLRLRTTCAPGRRFMAGLEPGQDQAALEGAFA
Ga0075018_104969351	3300006172	Watersheds	MSRTAQDVLEFDKLRELLRLRTTCTPGRRAVDGLEPQIERAALES
Ga0075018_105298292	3300006172	Watersheds	MSRTALEVLEFDNLRELLRQRTTCAPGRRHLDALKPGTNRVELE
Ga0066665_116998421	3300006796	Soil	MSRTAQDVLEFDKLRQLLRLKTTCAPGRRAVGELQPVTERAVLESVFA
Ga0075425_1014190771	3300006854	Populus Rhizosphere	MSRPAQDVLEFDKLRELLRLRTTCAPGRRRISALEPDT
Ga0079219_102692033	3300006954	Agricultural Soil	MARTAQEVLEFDKLRELLRLRTTCAPGRRAVDALDPGTNRAVLESAFA
Ga0099795_105340351	3300007788	Vadose Zone Soil	MGRSAQDVLEFDKLRELLRLRTTCVLGKRAVDALEPGTDRAGLESA
Ga0099829_104798022	3300009038	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNGLEPGKERAALELAFAL
Ga0099830_116130191	3300009088	Vadose Zone Soil	MSRTTQEVLEFDKLRELLRLRTTCAPGRRAVNALEP
Ga0099828_102412071	3300009089	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNGLEPGM
Ga0099828_104624543	3300009089	Vadose Zone Soil	MARSAQEVLEFDKLRELLRVRTTCAPGKRAVDALEPSTDRGALETSFAH
Ga0099792_105907841	3300009143	Vadose Zone Soil	MARSAQDVLEFDKLRELLRLRTTCAPGKRAVDALEPSTDR
Ga0126374_105879373	3300009792	Tropical Forest Soil	MSRKAEQILEFDKLRELLRGRSTCAPGKRALDALVFSQNRAELE
Ga0134084_100470443	3300010322	Grasslands Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVDELEPGKERAAL
Ga0134062_100434763	3300010337	Grasslands Soil	MSRTAQDVLEFDRLRELLRLRTTCASGRRAVNALEPGMERAALESAFAVIREA
Ga0126378_121284521	3300010361	Tropical Forest Soil	LEFDKLRDLLRLRTTCVPGKRYIGELEPNRNREALQAGFAL
Ga0126377_129926482	3300010362	Tropical Forest Soil	MSRRAQEVLEFDKLRELLRLRTTCAPGRRVINALEASRDR
Ga0126377_136031992	3300010362	Tropical Forest Soil	MSRSAQDILEFDKLRDLLRQRSTCVLGRRAIDALEF
Ga0126379_104658871	3300010366	Tropical Forest Soil	MSRSAEEVLEFDKLRELLRQRSTCVLGRRAVDALEF
Ga0126379_108743123	3300010366	Tropical Forest Soil	MSRTAEEILEFEKLRDLLRGRSTCAPGKRAVDTLGFSQQ
Ga0136449_1007369381	3300010379	Peatlands Soil	MSRSAQAVLEFDKLRELLRLRTTCAPGRRHVGELEPGTNRAAL
Ga0137392_106846541	3300011269	Vadose Zone Soil	MSRSAQEVLEFDKLRELLRLRTTCAPGQRAVEQLRFSRDAAFLQTQFA
Ga0137391_102479053	3300011270	Vadose Zone Soil	MARTAQDVLEFDKLRELLRLRTTCVLGKRAVGALEPGTDQPALEMAFAHIR
Ga0137391_103356133	3300011270	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVDALEPG
Ga0137393_100905383	3300011271	Vadose Zone Soil	MGRSAQEVLEFDKLRELLRLRTTCVLGNRAIDALEPGNDRVRLE
Ga0137393_101813311	3300011271	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNALEPAME
Ga0137393_104690181	3300011271	Vadose Zone Soil	MSRTTQEVLEFDKLRELLRLRTTCAPGRRAVNALEPGTERA
Ga0137389_104573801	3300012096	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVDDLGPGIDRAALESAF
Ga0137389_106768851	3300012096	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNGLEPAVDRAA
Ga0137388_100869844	3300012189	Vadose Zone Soil	MPRTAEEILEFDKLRDILRRRTTCAPGRRAVDALG
Ga0137388_103418392	3300012189	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNGLEPG
Ga0137363_108106131	3300012202	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNGLEP
Ga0137362_103392211	3300012205	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNGLEPGVERAALESAFAL
Ga0137380_105905753	3300012206	Vadose Zone Soil	MARTAQEVLEFDKLRELLRLRTTCAPGQRAVDALEPGTNRVVLESAFVLIRE
Ga0137377_101657911	3300012211	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNGLQPG
Ga0137387_107695372	3300012349	Vadose Zone Soil	MSRTAQDVLEFDKLRQLLRLRTTCAPGRRAVDELQP
Ga0137386_104282443	3300012351	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNGLQPGRQRPALESAF
Ga0137386_106858171	3300012351	Vadose Zone Soil	MARTAQEVLEFDKLRELLRLRTTCAPGQRAVDALEPGTNRV
Ga0137360_109412572	3300012361	Vadose Zone Soil	MSRSAQDVLEFDKLRELLRLRTTCAPGRRVIDGLEVSTSRAALEGAF
Ga0137360_114366852	3300012361	Vadose Zone Soil	MSRTAPDVLEFDKLRELLRLRTTCAPGRRAVNGLEPGLDRAAL
Ga0137390_102908901	3300012363	Vadose Zone Soil	MARTAQDVLEFDKLRELLRLRTTCAPGQRDVDALEPQMERAA
Ga0137390_105208441	3300012363	Vadose Zone Soil	MSRSAEEVLEFDKLRELLRQQTTCAPGRRGVAVLA
Ga0137390_105977212	3300012363	Vadose Zone Soil	MSRSTEEVLEFDKLRKLLRQRTTCAPGRRAVEQLVFSR
Ga0137398_102373721	3300012683	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTSAPGRRAVNGLEPGMDRAA
Ga0137398_105572462	3300012683	Vadose Zone Soil	MSRSAQDVLEFDQLRELLRLRTTCAPGRRVIDALEVSTNRG
Ga0137397_103062111	3300012685	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVDGLEP
Ga0137394_101912703	3300012922	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVSALEPGMDR
Ga0137413_106020792	3300012924	Vadose Zone Soil	MSRSAQDVLEFDKLRELLRLRTTCVPGRRVIDALE
Ga0137407_118919342	3300012930	Vadose Zone Soil	MSRSAQDVLEFDKLRELLRLRTTCAPGKRVIDALE
Ga0134087_100947253	3300012977	Grasslands Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVDDLEPGTARAALES
Ga0134078_103854841	3300014157	Grasslands Soil	MTRTAEDLLEFDKLRELLRLRTTCAPGRRAVNGLEPGMERAAL
Ga0182035_118971491	3300016341	Soil	MSRPAQEVLEFDKLRDLLRQRTTCAPGRRSVDGLGPANHRAEL
Ga0182034_108077931	3300016371	Soil	VIIEGTAHRGMSRRAEEVLEFDKLRELLRLRTTCAPGRRAIDALEVGRNR
Ga0182040_100370321	3300016387	Soil	MSRSAQEVLEFDKLRELLRLRTTCAPGRKFIHGLEPGTDRAALKSAF
Ga0182037_121180151	3300016404	Soil	MSRPAHEVLEFDKLRDLLRQRTTCAPGRRFVDGLEPGRNRAALELAF
Ga0134069_12932741	3300017654	Grasslands Soil	MSRTAEEILEFEKLRELLRGRSTCAPGKRALDALQFSRDRAQLEKGF
Ga0134083_105255312	3300017659	Grasslands Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNGLEPGMERAAL
Ga0187801_100036437	3300017933	Freshwater Sediment	MPRTALDVLEFDKLRELLRLRTTCAPGRRAVDALAPGTNRAGLEAAFALI
Ga0187803_104700071	3300017934	Freshwater Sediment	VSRSAQDVLEFDRVRELVRRETTCALGRRAVDALEFSTDRARLA
Ga0187808_103289282	3300017942	Freshwater Sediment	MPRTALEVLEFDKLRELLRLRTTCAPGRRAVDALQPGTNRA
Ga0187786_101089763	3300017944	Tropical Peatland	MARRAEEVLEFDRLSELLRQRTTCAPGRRAIDALE
Ga0187817_100046879	3300017955	Freshwater Sediment	MTGPNGKKMSRRAEEILEFDKLRELLRLRTTCAPGRRHIDGLE
Ga0187778_103247143	3300017961	Tropical Peatland	MPRTALDVLEFDKLRDLLRLRTTCAPGRRAVDALAPG
Ga0187776_110073901	3300017966	Tropical Peatland	MARTAQEVLEFDKLLELLRLRSTCAPGRRAIDAMTPTQDRGAL
Ga0187782_108941432	3300017975	Tropical Peatland	MSRRAEDVLEFDKLRELLRLRTTCAPGRREIDALEV
Ga0187822_101327513	3300017994	Freshwater Sediment	MARTAQEVLEFDKLRELLRLRTTCAPGRRAVTALEP
Ga0187816_105760142	3300017995	Freshwater Sediment	MSRSAHTVLEFDKLRELLRLRTTCAPGKRHVGELEPGTDRA
Ga0187804_103055092	3300018006	Freshwater Sediment	MSRPAQVVLEFDKLRELLRLRTTCAPGRRNVDELEPGTNRGALESAFAL
Ga0187863_106903891	3300018034	Peatland	MSRTAQDVLELDRLRDLVRGETTCALGRRAIDALAFSTDRA
Ga0187784_110039932	3300018062	Tropical Peatland	MAKRAEDVLEFDKLRELLRLRTTCAPGRRYIDGLEPGGKRDALERG
Ga0187770_107977432	3300018090	Tropical Peatland	MSRSAQAVLEFDKLRELLRQRTTCAPGRRNVDELEPGTN
Ga0187770_111061411	3300018090	Tropical Peatland	MSRSAQAVLEFDKLRELLRLRTTCAPGRRHAGELEPGRNRAALEGTFA
Ga0187770_117620971	3300018090	Tropical Peatland	MARPAEDVLEFDKLRELLRLRTTCAPGRRCVDALQPNNQR
Ga0066662_101857991	3300018468	Grasslands Soil	MPRTAEEILEFDKLRDILRRRTTCAPGRRAVDALGPSRDRARL
Ga0066662_110965922	3300018468	Grasslands Soil	MARSAQEVLEFDKLRELLRLRTTCVLGKRAVDALEPST
Ga0137408_11972333	3300019789	Vadose Zone Soil	MSRTAEEILEFEKLRELLRGRSTCAPGKRALDALQFS
Ga0179594_103660622	3300020170	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRFRTTCAPGRRAVDALEPGVERAA
Ga0179592_101158841	3300020199	Vadose Zone Soil	MARTAQDVLEFDKLRELLRLRTTCVLGKKAIDALGPGTD
Ga0179592_103811281	3300020199	Vadose Zone Soil	MSRSAQDVLEFDKLRELLRLRTTCAPGQRVIDGLEVSTNRAALE
Ga0179592_104863111	3300020199	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVDALQFG
Ga0210407_105439553	3300020579	Soil	MSRTAQDVLEFDKLRELLRLRTTCVPGRRSVDALEPSTDRE
Ga0210403_110011112	3300020580	Soil	MSRTAQDVLEFDKLRELLRLRTTCTPGRRAVNALEPGIERA
Ga0210399_108318142	3300020581	Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNELEPGMARAALESAF
Ga0210399_113670311	3300020581	Soil	MSRTAEDILEFDRLRDLLRRQTTCAPGRRAVDALS
Ga0215015_109568041	3300021046	Soil	MARTAQDVLEFDKLRELLRLRTTCAPGRRAVDALEPRVERAALEAV
Ga0210404_104010212	3300021088	Soil	MSRTAQDLLEFDKLRELLRLRTTCAPGRRAVNVLEPAVDR
Ga0210406_104341551	3300021168	Soil	MSRSAQDVLEFDKLRELLRLRTTCAPGRRVIDALEVSTNR
Ga0210406_104897672	3300021168	Soil	MPRSAEDVLEFDKLRELLRQRTTSVLGRRAVDALVF
Ga0210400_104168091	3300021170	Soil	MARSAQDVLEFDKLRELLRLRTTCAPGKRAVDALEPSTDRG
Ga0210400_104541743	3300021170	Soil	MARTAQDVLEFDKLRELLRLRTTCVLGKRAVSALEPGIDQPSL
Ga0210408_101621403	3300021178	Soil	MSRPAQDVLEFDKLRELLRLRTTCAPGRRRISALEPDTDRSS
Ga0210396_102668933	3300021180	Soil	MSRSAQDVLEFDKLRELLRLRTTCAPGKRVIDALEVSVNRAA
Ga0210389_101937973	3300021404	Soil	MSRTAQDVLEFDKLRELLRLRTTCVPGRRSVDALEPGTDRE
Ga0210386_117087271	3300021406	Soil	MARTAQDVLEFDKVRELLRLRTTCALGRRAVDAREPSTDRPA
Ga0210394_117791602	3300021420	Soil	MSRPAQDVLEFDKLRELLRLRTTCAPGRRRISALEPDTDRSSL
Ga0210384_118100191	3300021432	Soil	MSRTAQDVLEFDQLRELLRLRTTCVPGRRSVDALEPGVDR
Ga0210391_111951402	3300021433	Soil	MSRTALDVLEFDKLLELVRQRTTCAPGRRFVDGLQPGM
Ga0210392_112710512	3300021475	Soil	MSRTAQDVLEFDKLRELLRLRTTCPPGRRAVSLLEPVTDREA
Ga0210402_105747953	3300021478	Soil	MSRSAWDILEFDNLRELLRQRTTCAPGRRHLDLLAPGTNREAL
Ga0210402_117264652	3300021478	Soil	MSRSAEEVLEFDKLRELLRLRTTCRPGWRVVEELAFSRDAG
Ga0210410_118407632	3300021479	Soil	MARTAQDVLEFDKLRELLRLRTTCVLGKRAVDALEPGTDRPALETA
Ga0224544_10533211	3300023250	Soil	MSRTAEEVLEFDKLRELLRLRTTSATGRRSVDALQFSQDRHALEAEFA
Ga0247667_10985802	3300024290	Soil	MSRTAQDVLEFDKLRELLRLRTTCSPGRRAVDALEFATDRSTLEAA
Ga0208456_10641082	3300025441	Peatland	MSRSAQAVLEFDKLRELLRLRTTCAPGRRHVGELEPGTNRAALES
Ga0207710_101050773	3300025900	Switchgrass Rhizosphere	MSRTAQDVLEFDKLRELLRQRTTSVLGRRSVDALA
Ga0207685_100374281	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MARTAQDVLEFDKLRELLRLRTTCVLGKRAIDALERGTDRPSLE
Ga0207693_104669641	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSRSAQDVLEFDKLRELLRLQTTCAPGRRVIGALEVSTNRAALE
Ga0207693_108185182	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSRPAQDVLEFDKLRELLRLRTTCAPGRRRISALQPG
Ga0207665_109236342	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSRSAQDVLEFDKLRELLRLRTTCVPGRRNIDGLTPINDRVVLD
Ga0209239_11751363	3300026310	Grasslands Soil	MSRTAQGVLEFDKLRELLRLRTTCAPGRRAVNALEPGMERAALAS
Ga0209377_13378301	3300026334	Soil	MSRSAQDVLEFDKLRELLRLRTTCAPGRRVIDALEVNTNRGALE
Ga0257161_11437371	3300026508	Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVDGLEPGMDRAALESAF
Ga0209648_104987151	3300026551	Grasslands Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNALEP
Ga0209622_10723502	3300027502	Forest Soil	MSRPAQDVLEFDKLRDLLRQRTTCAPGRRFIGGLEPANNRAAL
Ga0209684_10261153	3300027527	Tropical Forest Soil	MSRPAHEVLEFDKLRDLLRQRTTCAPGRRFVDGLEPGRNRAALELA
Ga0209220_11239102	3300027587	Forest Soil	MARSAQDVLEFDKLRELLRLRTTCAPGKRAVDALEPSTDRAALEGGFA
Ga0209116_10445821	3300027590	Forest Soil	MSRSAQDVLEFDKLRELLRQRTTSAPGHRHIDALAPTTDRAALDSAFAL
Ga0209076_10079701	3300027643	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNALEPGMERATLES
Ga0209076_11720421	3300027643	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRHAVDGLEP
Ga0209060_103603042	3300027826	Surface Soil	MARRAEEVLEFAGLRELLRGRTTCAPGRRFVEGLKFGR
Ga0209580_101166981	3300027842	Surface Soil	MARSAQDVLEFDKLRELLRLRTTCAPGKRAAEALEP
Ga0209180_102589081	3300027846	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNALEPGMERAALESAF
Ga0209180_108017262	3300027846	Vadose Zone Soil	MARTAQDVLEFDKLRELLRLRTTCVLGKRAVGALEPG
Ga0209465_104750751	3300027874	Tropical Forest Soil	MSRSAEEVLEFDKLRELLRQRSTCVLGRRAVDALEFSRDAPFL
Ga0209590_109580652	3300027882	Vadose Zone Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNALEPGMERAAL
Ga0209275_104756012	3300027884	Soil	MSRSAQDVLEFDKLRELLRQRTTCAPGHRHIDALAPTTDRAA
Ga0302227_102603171	3300028795	Palsa	MPRTAEDVLEFDKVRELLRLRTTCVPGRRAVDALQFG
Ga0302221_105390952	3300028806	Palsa	MSRTAQDVLELDRLRDLVRGETTCALGRRAVEALAFSTDRAHL
Ga0308309_105117873	3300028906	Soil	MSRTAQDVLEFDKLRELLRQRTTCAPGRRYVDALEPGMDRAALE
Ga0308309_109120611	3300028906	Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAINALEPGTERAALESA
Ga0308309_109211391	3300028906	Soil	MQLPYLEETARRRMSRTTQEVLEFDKLRELLRLRTTCAPGRRFMAGLEPGQ
Ga0308309_109623961	3300028906	Soil	MSRSAQDVLEFDKLRELLRQRTTCVPGHRHIDALAPTTDRAALES
Ga0311369_109877852	3300029910	Palsa	MSRTAQDVLELDRLRDLVRGETTCALGRRAVDALAFSTDR
Ga0302178_103623212	3300030013	Palsa	MSRTAQDVLELDRLRDLVRGETTCALGRRAADALAFSTDR
Ga0311353_107593092	3300030399	Palsa	MSRTAQDVLELDRLRDLVRGETTCALGRRAVEALAFSTDRAHLE
Ga0302184_102039601	3300030490	Palsa	MPRTAEDVLEFDKVRELLRLRTTCVPGRRAVDALQFGLDRRALEAEFALVR
Ga0302311_105074862	3300030739	Palsa	VSRSAQDVLEFDKLRELLRLRSTSTLGRQAVDALQFRTDRAALETEFAH
Ga0265763_10573361	3300030763	Soil	MSRTAQDLLEFDKLRELFRLRTTSAPGRRAVDALEFSTNRAALEAAFR
Ga0073994_100694853	3300030991	Soil	MSRSAQDVLEFDKLRELLRLKTTCAPGRRAVNALDPGMERAPLESAFAL
Ga0170823_116973901	3300031128	Forest Soil	MSRSAQDVLEFDKLRELLRLRTTCVPGRRVIDALEVGTDRASLE
Ga0318516_102324561	3300031543	Soil	MSRPAHEVLEFDKLRDLLRQRTTCAPGRRFVDGLE
Ga0318528_107583682	3300031561	Soil	MSRPAHEVLEFDKLRDLLRQRTTCTPGRRFVDGLEPG
Ga0318515_104042692	3300031572	Soil	MSRPAQEVLEFDKLRDLLRQRTTCAPGRRFVDGLEPAN
Ga0318542_100859561	3300031668	Soil	MSRPAQEVLEFDKLRDLLRQRTTCAPGRRSVDGLGPANHRAELD
Ga0307474_101991572	3300031718	Hardwood Forest Soil	MARTAQDVLEFDKLRELLRLRTTSVLGKRAIDGLDVSAD
Ga0307469_103382781	3300031720	Hardwood Forest Soil	MARTAQDVLEFDKVRELLRLRTTCALGRRAVDAREPSTDQAAL
Ga0307477_109303021	3300031753	Hardwood Forest Soil	MSRTAQDILEFDKLRELLRLRTTCAPGRRAVNALEPGMDRVA
Ga0318543_103944201	3300031777	Soil	MSRPAHEVLEFDKLRDLLRQRTTCAPGRRFVDGLEPGRN
Ga0318503_101857631	3300031794	Soil	MSRSAQEVLEFDKLRELLRLRTTCAPGRKFIHGLE
Ga0318576_100095805	3300031796	Soil	MARAAQEVLEFDKLRELLRLRTTCAPGRRAVDVLE
Ga0318576_100484291	3300031796	Soil	MSRPAHEVLEFDKLRDLLRQRTTCAPGRRFVDGLEPGRNRAALELAFA
Ga0318576_103981512	3300031796	Soil	MSRSAQEVLEFDKLRELLRLRTTCAPGRKFIHGLEPG
Ga0318523_101999781	3300031798	Soil	MSRPAHEVLEFDKLRDLLRQRTTCAPGRRFVDGLEPGRNRAALE
Ga0307473_111064711	3300031820	Hardwood Forest Soil	MARSPQDVLEFDNLRELLRLRTTCAPGKRAVDALEPSTDRGILEGGFA
Ga0307473_113017341	3300031820	Hardwood Forest Soil	MSRTAQDVLEFDKLRELLRQRTTSVLGRRSVDALAF
Ga0310917_107746921	3300031833	Soil	MSRPAQEVLEFDKLRDLLRQRTTCAPGRRFVDGLEPANHRVVLEGV
Ga0306919_104368513	3300031879	Soil	MSRPAHEVLEFDKLRDLLRQRTTCAPGRRFVDGLEPGR
Ga0306923_125219231	3300031910	Soil	MSRPAQEVLEFDKLRDLLRQRTTCAPGRRSVDGLELANHRAG
Ga0307479_109403031	3300031962	Hardwood Forest Soil	MARTAQDVLEFDKVRELLRLRTTCALGRRAVDAREPSTDRPAL
Ga0307479_117801311	3300031962	Hardwood Forest Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVNALEPGM
Ga0306922_113536902	3300032001	Soil	MSRRAEEVLEFDKLRELLRLRTTCAPGRRVIDALEVGTNRVALER
Ga0318533_102502263	3300032059	Soil	MSRSAEDVLEFDKLKELLRLRTTCAPGRRQVEGLIFTRDRRTLE
Ga0318504_101343831	3300032063	Soil	MSRPAQEVLEFDKLRDLLRQRTTCAPGRRSVDGLGPANHRAELDGVFQLI
Ga0307470_102854483	3300032174	Hardwood Forest Soil	MSRSAQDVLEFDKLRELLRLRTTCPPGRREIDALEVSTNRAAL
Ga0307471_1027212221	3300032180	Hardwood Forest Soil	MARTAQDVLEFDKVRELLRLRTTCALGRRAVDAREPSTDRPALEAAFA
Ga0335082_105762141	3300032782	Soil	MARARRAEEILEFDRLRELLRLRTTCAPGRRSIDSLEPNG
Ga0335079_100610821	3300032783	Soil	MARTAQDVLEFDKLRELLRLRTTCALGRRAVDALAFSGNRPA
Ga0335078_100855621	3300032805	Soil	MSRSAQDVLELDRLRDLVRRETTCALGRRAVDALEFSTDRAHL
Ga0316620_102141431	3300033480	Soil	MSRTAQDVLEFDKLRELLRLRTTCAPGRRAVDALKFGSDRAAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F029537

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences