NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F029484

Metagenome / Metatranscriptome Family F029484

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F029484
Family Type Metagenome / Metatranscriptome
Number of Sequences 188
Average Sequence Length 80 residues
Representative Sequence MAQANPNAAVRAANGFVGQTHILSVDDVSVVSVEAACLEAQNEGFVVVAVEDDVASDGCHIALQGAQATPSITGTTLVVTFG
Number of Associated Samples 143
Number of Associated Scaffolds 188

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 85.64 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 59.57 %
Associated GOLD sequencing projects 131
AlphaFold2 3D model prediction Yes
3D model pTM-score0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (77.660 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(18.085 % of family members)
Environment Ontology (ENVO) Unclassified
(51.596 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(92.553 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 14.55%    β-sheet: 28.18%    Coil/Unstructured: 57.27%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.77
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.58.56.0: automated matchesd5diib15dii0.65327
d.58.14.1: Ribosomal protein S6d2j5aa12j5a0.64513
d.58.6.0: automated matchesd4dz6a14dz60.63978
d.58.14.1: Ribosomal protein S6d1vmba_1vmb0.63973
d.58.34.1: Formiminotransferase domain of formiminotransferase-cyclodeaminase.d1qd1a11qd10.63971


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 188 Family Scaffolds
PF03796DnaB_C 4.79
PF02195ParBc 4.79
PF12224Amidoligase_2 1.60
PF137592OG-FeII_Oxy_5 1.06
PF02773S-AdoMet_synt_C 1.06
PF00082Peptidase_S8 0.53
PF00154RecA 0.53
PF13671AAA_33 0.53
PF03477ATP-cone 0.53
PF06035Peptidase_C93 0.53
PF01341Glyco_hydro_6 0.53
PF03819MazG 0.53
PF13155Toprim_2 0.53
PF00080Sod_Cu 0.53
PF16473Rv2179c-like 0.53
PF04055Radical_SAM 0.53
PF13203DUF2201_N 0.53
PF06941NT5C 0.53
PF02511Thy1 0.53

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 188 Family Scaffolds
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 4.79
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 4.79
COG0192S-adenosylmethionine synthetaseCoenzyme transport and metabolism [H] 1.06
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 0.53
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 0.53
COG2032Cu/Zn superoxide dismutaseInorganic ion transport and metabolism [P] 0.53
COG3672Predicted transglutaminase-like proteinPosttranslational modification, protein turnover, chaperones [O] 0.53
COG45025'(3')-deoxyribonucleotidaseNucleotide transport and metabolism [F] 0.53
COG5297Cellulase/cellobiase CelA1Carbohydrate transport and metabolism [G] 0.53


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A77.66 %
All OrganismsrootAll Organisms22.34 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000117|DelMOWin2010_c10007322Not Available6514Open in IMG/M
3300000117|DelMOWin2010_c10011370Not Available5001Open in IMG/M
3300000117|DelMOWin2010_c10020284Not Available3478Open in IMG/M
3300000159|LPaug08P2610mDRAFT_c1002033All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2733573Open in IMG/M
3300000168|LPjun09P1210mDRAFT_c1002005Not Available2083Open in IMG/M
3300000928|OpTDRAFT_10003258Not Available13611Open in IMG/M
3300000929|NpDRAFT_10304565Not Available610Open in IMG/M
3300000947|BBAY92_10046483Not Available1183Open in IMG/M
3300000949|BBAY94_10008317All Organisms → Viruses → Predicted Viral2864Open in IMG/M
3300001472|JGI24004J15324_10000213Not Available23366Open in IMG/M
3300001589|JGI24005J15628_10001211All Organisms → cellular organisms → Bacteria13941Open in IMG/M
3300001589|JGI24005J15628_10005054Not Available6503Open in IMG/M
3300001940|GOS2222_1013697Not Available1792Open in IMG/M
3300001947|GOS2218_1033594All Organisms → Viruses → Predicted Viral1568Open in IMG/M
3300004097|Ga0055584_101320030Not Available751Open in IMG/M
3300004097|Ga0055584_101866423Not Available618Open in IMG/M
3300004097|Ga0055584_102168114Not Available567Open in IMG/M
3300004369|Ga0065726_12483Not Available24773Open in IMG/M
3300004448|Ga0065861_1023620Not Available9607Open in IMG/M
3300005837|Ga0078893_10083774Not Available40548Open in IMG/M
3300005837|Ga0078893_10652252Not Available541Open in IMG/M
3300005941|Ga0070743_10083160All Organisms → Viruses → Predicted Viral1080Open in IMG/M
3300005941|Ga0070743_10303313Not Available514Open in IMG/M
3300005942|Ga0070742_10115876Not Available742Open in IMG/M
3300006025|Ga0075474_10031084Not Available1878Open in IMG/M
3300006026|Ga0075478_10273352Not Available503Open in IMG/M
3300006193|Ga0075445_10000122Not Available40716Open in IMG/M
3300006400|Ga0075503_1648016Not Available1462Open in IMG/M
3300006403|Ga0075514_1791960All Organisms → Viruses → Predicted Viral4785Open in IMG/M
3300006404|Ga0075515_10814157Not Available1299Open in IMG/M
3300006752|Ga0098048_1000006All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales199541Open in IMG/M
3300006752|Ga0098048_1000163Not Available33600Open in IMG/M
3300006789|Ga0098054_1216347Not Available696Open in IMG/M
3300006793|Ga0098055_1005118All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae6344Open in IMG/M
3300006793|Ga0098055_1022631Not Available2669Open in IMG/M
3300006793|Ga0098055_1030484Not Available2239Open in IMG/M
3300006802|Ga0070749_10005036All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED1568718Open in IMG/M
3300006868|Ga0075481_10001460Not Available9290Open in IMG/M
3300006870|Ga0075479_10027977Not Available2457Open in IMG/M
3300006870|Ga0075479_10321570Not Available605Open in IMG/M
3300006874|Ga0075475_10030208All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.2619Open in IMG/M
3300006921|Ga0098060_1071130Not Available1006Open in IMG/M
3300006924|Ga0098051_1002711Not Available6167Open in IMG/M
3300007539|Ga0099849_1007585Not Available4918Open in IMG/M
3300007692|Ga0102823_1092599Not Available802Open in IMG/M
3300007954|Ga0105739_1116306Not Available620Open in IMG/M
3300007962|Ga0102907_1119337Not Available684Open in IMG/M
3300009000|Ga0102960_1275722Not Available595Open in IMG/M
3300009002|Ga0102810_1102111Not Available893Open in IMG/M
3300009071|Ga0115566_10069429Not Available2331Open in IMG/M
3300009086|Ga0102812_10146139Not Available1294Open in IMG/M
3300009433|Ga0115545_1311056Not Available523Open in IMG/M
3300009436|Ga0115008_10000176Not Available42713Open in IMG/M
3300009436|Ga0115008_10014496Not Available6431Open in IMG/M
3300010296|Ga0129348_1017599All Organisms → Viruses → Predicted Viral2602Open in IMG/M
3300010883|Ga0133547_11338365Not Available1356Open in IMG/M
3300012525|Ga0129353_1798275Not Available643Open in IMG/M
3300012528|Ga0129352_10760345Not Available1807Open in IMG/M
3300012920|Ga0160423_10005981All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2739866Open in IMG/M
3300012936|Ga0163109_10077772All Organisms → Viruses → Predicted Viral2430Open in IMG/M
3300012953|Ga0163179_10176967Not Available1616Open in IMG/M
3300012954|Ga0163111_10190569Not Available1764Open in IMG/M
3300016740|Ga0182096_1069483All Organisms → cellular organisms → Bacteria → Proteobacteria1912Open in IMG/M
3300016740|Ga0182096_1182714Not Available562Open in IMG/M
3300017706|Ga0181377_1064755Not Available673Open in IMG/M
3300017706|Ga0181377_1064756Not Available673Open in IMG/M
3300017709|Ga0181387_1107128Not Available573Open in IMG/M
3300017721|Ga0181373_1068366Not Available635Open in IMG/M
3300017724|Ga0181388_1025539All Organisms → Viruses → Predicted Viral1466Open in IMG/M
3300017740|Ga0181418_1022288Not Available1647Open in IMG/M
3300017740|Ga0181418_1123943Not Available624Open in IMG/M
3300017743|Ga0181402_1092323Not Available786Open in IMG/M
3300017751|Ga0187219_1147314Not Available680Open in IMG/M
3300017753|Ga0181407_1150496Not Available575Open in IMG/M
3300017763|Ga0181410_1008191All Organisms → cellular organisms → Bacteria3725Open in IMG/M
3300017770|Ga0187217_1267102Not Available556Open in IMG/M
3300017773|Ga0181386_1001455Not Available8900Open in IMG/M
3300017776|Ga0181394_1120473Not Available828Open in IMG/M
3300017818|Ga0181565_10016037Not Available5600Open in IMG/M
3300017818|Ga0181565_10135103Not Available1731Open in IMG/M
3300017818|Ga0181565_10637035Not Available681Open in IMG/M
3300017824|Ga0181552_10003684Not Available10894Open in IMG/M
3300017824|Ga0181552_10086753All Organisms → cellular organisms → Bacteria → Proteobacteria1759Open in IMG/M
3300017949|Ga0181584_10132102Not Available1685Open in IMG/M
3300017949|Ga0181584_10233445Not Available1198Open in IMG/M
3300017950|Ga0181607_10108026All Organisms → cellular organisms → Bacteria1747Open in IMG/M
3300017951|Ga0181577_10050215All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.2969Open in IMG/M
3300017952|Ga0181583_10131507Not Available1687Open in IMG/M
3300017952|Ga0181583_10188561Not Available1358Open in IMG/M
3300017956|Ga0181580_10001362Not Available19415Open in IMG/M
3300017956|Ga0181580_10013766All Organisms → cellular organisms → Bacteria → Proteobacteria6418Open in IMG/M
3300017956|Ga0181580_10125084All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED1561862Open in IMG/M
3300017957|Ga0181571_10110916Not Available1837Open in IMG/M
3300017967|Ga0181590_10098094All Organisms → Viruses → Predicted Viral2293Open in IMG/M
3300017967|Ga0181590_10993410Not Available547Open in IMG/M
3300017986|Ga0181569_10006699Not Available8748Open in IMG/M
3300018039|Ga0181579_10191003Not Available1208Open in IMG/M
3300018049|Ga0181572_10431549Not Available819Open in IMG/M
3300018421|Ga0181592_10016074All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Salicola phage SCTP-26111Open in IMG/M
3300018426|Ga0181566_10510683Not Available843Open in IMG/M
3300018428|Ga0181568_10806839Not Available726Open in IMG/M
3300019281|Ga0182077_1067437All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Ostreococcus702Open in IMG/M
3300019282|Ga0182075_1579654Not Available984Open in IMG/M
3300019751|Ga0194029_1000160Not Available8485Open in IMG/M
3300020055|Ga0181575_10655711Not Available540Open in IMG/M
3300020175|Ga0206124_10238129Not Available708Open in IMG/M
3300020178|Ga0181599_1368360Not Available506Open in IMG/M
3300020185|Ga0206131_10024716Not Available4760Open in IMG/M
3300020185|Ga0206131_10095521Not Available1730Open in IMG/M
3300020185|Ga0206131_10143029Not Available1270Open in IMG/M
3300020347|Ga0211504_1065747Not Available843Open in IMG/M
3300020400|Ga0211636_10147316Not Available932Open in IMG/M
3300020401|Ga0211617_10006237All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED1565469Open in IMG/M
3300020438|Ga0211576_10108953Not Available1525Open in IMG/M
3300020442|Ga0211559_10048352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2732095Open in IMG/M
3300020463|Ga0211676_10324966Not Available867Open in IMG/M
3300020469|Ga0211577_10023167Not Available4820Open in IMG/M
3300020469|Ga0211577_10026846All Organisms → Viruses → Predicted Viral4414Open in IMG/M
3300020469|Ga0211577_10091074Not Available2131Open in IMG/M
3300020474|Ga0211547_10031406All Organisms → cellular organisms → Bacteria2929Open in IMG/M
3300020810|Ga0181598_1015332All Organisms → cellular organisms → Bacteria → Proteobacteria4836Open in IMG/M
3300021084|Ga0206678_10200935All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED273989Open in IMG/M
3300021085|Ga0206677_10000015Not Available141289Open in IMG/M
3300021085|Ga0206677_10067146All Organisms → Viruses → Predicted Viral1791Open in IMG/M
3300021089|Ga0206679_10333043All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED273818Open in IMG/M
3300021169|Ga0206687_1370733Not Available643Open in IMG/M
3300021185|Ga0206682_10010318Not Available6646Open in IMG/M
3300021335|Ga0213867_1163510Not Available757Open in IMG/M
3300021347|Ga0213862_10156969Not Available800Open in IMG/M
3300021356|Ga0213858_10019360Not Available3245Open in IMG/M
3300021356|Ga0213858_10191324Not Available995Open in IMG/M
3300021356|Ga0213858_10212579Not Available937Open in IMG/M
3300021356|Ga0213858_10262309Not Available830Open in IMG/M
3300021364|Ga0213859_10472892Not Available547Open in IMG/M
3300021365|Ga0206123_10098032Not Available1405Open in IMG/M
3300021365|Ga0206123_10244112Not Available782Open in IMG/M
3300021368|Ga0213860_10021003Not Available2711Open in IMG/M
3300021368|Ga0213860_10162428Not Available985Open in IMG/M
3300021375|Ga0213869_10000896Not Available22916Open in IMG/M
3300021375|Ga0213869_10014929Not Available4507Open in IMG/M
3300021375|Ga0213869_10015174All Organisms → cellular organisms → Bacteria4463Open in IMG/M
3300021375|Ga0213869_10017475All Organisms → Viruses → Predicted Viral4111Open in IMG/M
3300021375|Ga0213869_10127885Not Available1208Open in IMG/M
3300021378|Ga0213861_10156519Not Available1286Open in IMG/M
3300021378|Ga0213861_10200273Not Available1089Open in IMG/M
3300021379|Ga0213864_10317798Not Available790Open in IMG/M
3300021957|Ga0222717_10001340All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → unclassified Woeseia → Woeseia sp.20224Open in IMG/M
3300021957|Ga0222717_10061387Not Available2415Open in IMG/M
3300021958|Ga0222718_10052679All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2732573Open in IMG/M
3300021959|Ga0222716_10005642Not Available9723Open in IMG/M
3300021959|Ga0222716_10481443Not Available702Open in IMG/M
3300021961|Ga0222714_10421325Not Available701Open in IMG/M
3300021964|Ga0222719_10490454Not Available740Open in IMG/M
(restricted) 3300022920|Ga0233426_10143482Not Available1018Open in IMG/M
3300022927|Ga0255769_10096510All Organisms → cellular organisms → Bacteria1522Open in IMG/M
3300023087|Ga0255774_10320028Not Available734Open in IMG/M
(restricted) 3300023109|Ga0233432_10254000Not Available839Open in IMG/M
3300023172|Ga0255766_10133484All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED1561442Open in IMG/M
3300023173|Ga0255776_10287483Not Available942Open in IMG/M
(restricted) 3300024264|Ga0233444_10086104All Organisms → Viruses → Predicted Viral1695Open in IMG/M
(restricted) 3300024324|Ga0233443_1254622Not Available596Open in IMG/M
3300024343|Ga0244777_10112069Not Available1761Open in IMG/M
3300025070|Ga0208667_1000461Not Available17342Open in IMG/M
3300025070|Ga0208667_1000560Not Available15523Open in IMG/M
3300025084|Ga0208298_1016682Not Available1687Open in IMG/M
3300025108|Ga0208793_1123258Not Available706Open in IMG/M
3300025120|Ga0209535_1063757Not Available1486Open in IMG/M
3300025138|Ga0209634_1000389Not Available34199Open in IMG/M
3300025138|Ga0209634_1008230Not Available6482Open in IMG/M
3300025653|Ga0208428_1000667All Organisms → cellular organisms → Bacteria15371Open in IMG/M
3300025653|Ga0208428_1004089Not Available5609Open in IMG/M
3300025653|Ga0208428_1063804Not Available1091Open in IMG/M
3300025674|Ga0208162_1025766Not Available2204Open in IMG/M
3300025751|Ga0208150_1033995Not Available1774Open in IMG/M
3300025759|Ga0208899_1013163All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED1564458Open in IMG/M
3300025771|Ga0208427_1187201Not Available664Open in IMG/M
3300026183|Ga0209932_1126038Not Available547Open in IMG/M
3300027582|Ga0208971_1036543Not Available1449Open in IMG/M
3300027672|Ga0209383_1000129Not Available53250Open in IMG/M
3300027753|Ga0208305_10058153Not Available1489Open in IMG/M
3300027833|Ga0209092_10000372Not Available43391Open in IMG/M
3300027833|Ga0209092_10027321Not Available3720Open in IMG/M
3300028189|Ga0257127_1172138Not Available583Open in IMG/M
3300031519|Ga0307488_10000941Not Available24167Open in IMG/M
3300031702|Ga0307998_1145383Not Available839Open in IMG/M
3300031766|Ga0315322_10463509Not Available835Open in IMG/M
3300031774|Ga0315331_10069820All Organisms → Viruses → Predicted Viral2607Open in IMG/M
3300032360|Ga0315334_11301930Not Available626Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh18.09%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine13.83%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous10.64%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater9.04%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.38%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater5.85%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater4.26%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.72%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine3.19%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.19%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.13%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.60%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.60%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.60%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.60%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.60%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.06%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine1.06%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water1.06%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.06%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine1.06%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.06%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface1.06%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.53%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.53%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.53%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.53%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.53%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.53%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.53%
SalineEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline0.53%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000159Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P26 10mEnvironmentalOpen in IMG/M
3300000168Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 10mEnvironmentalOpen in IMG/M
3300000928Marine plume microbial communities from the Columbia River - 25 PSUEnvironmentalOpen in IMG/M
3300000929Marine plume microbial communities from the Columbia River - 15 PSUEnvironmentalOpen in IMG/M
3300000947Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92Host-AssociatedOpen in IMG/M
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300001940Marine microbial communities from Bay of Fundy, Nova Scotia, Canada - GS006EnvironmentalOpen in IMG/M
3300001947Marine microbial communities from the Gulf of Maine, Canada - GS002EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004369Saline microbial communities from the South Caspian sea - cas-15EnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300005942Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757EnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006193Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNAEnvironmentalOpen in IMG/M
3300006400Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006403Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006404Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007692Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743EnvironmentalOpen in IMG/M
3300007954Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_0.2umEnvironmentalOpen in IMG/M
3300007962Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02EnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009002Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009086Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300012525Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012528Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300016740Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413YT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017721Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaGEnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017740Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017957Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018039Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018049Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019281Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019282Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071407BT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019751Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MGEnvironmentalOpen in IMG/M
3300020055Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020347Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)EnvironmentalOpen in IMG/M
3300020400Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)EnvironmentalOpen in IMG/M
3300020401Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020442Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)EnvironmentalOpen in IMG/M
3300020463Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300020474Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)EnvironmentalOpen in IMG/M
3300020810Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021084Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021089Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015EnvironmentalOpen in IMG/M
3300021169Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021335Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540EnvironmentalOpen in IMG/M
3300021347Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021364Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021379Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022920 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MGEnvironmentalOpen in IMG/M
3300022927Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaGEnvironmentalOpen in IMG/M
3300023087Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023172Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaGEnvironmentalOpen in IMG/M
3300023173Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaGEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300024324 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_200_MGEnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027582Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_18_M0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027672Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027753Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)EnvironmentalOpen in IMG/M
3300027833Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028189Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_135mEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031702Marine microbial communities from David Island wharf, Antarctic Ocean - #37EnvironmentalOpen in IMG/M
3300031766Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOWin2010_1000732223300000117MarineMAQSNPNAAVRAANGFVGTTHIMSVTDVSTTSVEAVCTEAQVEGFVVVAVEDDVASDGCHIAVQGAGATPSFTGATLVVTFS*
DelMOWin2010_1001137023300000117MarineMAQANPNAAVRAANSLVGTTHILEVDDVTSVTVEAACTEAQNEGFVVVAVEGLTSGSHIAVQGAGATPSITGATLIATFS*
DelMOWin2010_1002028453300000117MarineMAQANPNAAVRAANGFVGKTYILEVDDVSVVTVEAACTEAQNEGFVVVAVEGVASGNHIALQGASATPSITGATLIATFG*
LPaug08P2610mDRAFT_100203363300000159MarineMAQANPNADVRAANGFVGTTHIMAVTDVSAVSVKAVCTEAQVEGFIVVAVENDIASDGCHIAVQGAGATPSFTGATLVVTFS*
LPjun09P1210mDRAFT_100200553300000168MarineMAQXNPXAXVRAANGFVGTTHILEVDNVSVVTVEAACTEAQVEGFVVVAVTGVVSGSHIALQGAGATPSITGTTLIATFS*
OpTDRAFT_10003258123300000928Freshwater And MarineMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQVEGFVVVAVSGLVSGSHIAVQGAAATPSIAGTTLIATFG*
NpDRAFT_1030456523300000929Freshwater And MarineRAANGFVGTTHIMAVTDVSVKSVADVTAEAQNEGFVVVAIEDDVASDGCHIAVQGAGATPSFTGATLVVTFS*
BBAY92_1004648343300000947Macroalgal SurfaceMAQSNPNAAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQNEGFVVVAVEGLTSGSHIAVQGAAATPSITGTTLIATFS*
BBAY94_1000831753300000949Macroalgal SurfaceAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQNEGFVVVAVEGLTSGSHIAVQGAAATPSITGTTLIATFS*
JGI24004J15324_1000021373300001472MarineMAQTNPNAAVRAANGFVGTTHILEVDNVSVVTVEAACTEAQVEGFVVVAVTGVVSGSHIALQGAGATPSITGTTLIATFS*
JGI24005J15628_10001211143300001589MarineMAQTNPNADVRAANGFVGTTHIMAVTDVSAVSVKAVCTEAQVEGFIVVAVENDIASDGCHIAVQGAGATPSFTGATLVVTFS*
JGI24005J15628_1000505453300001589MarineMAQANPNADVRAANGFVGTTHILEVDNVSAVTVKAACTEAQVEGFIVVAVTGVVSGSHIALQGAGATPSIAGTTLIATFS*
GOS2222_101369723300001940MarineMAQTNPNADVRAANGLVGTTHIIAVTDVSVVSVKAVCTEAQVEGFTVVAVEDDVANDGCHIAVQGAGATPSFTGATLVVTFG*
GOS2218_103359413300001947MarineGNGFVGTTHIMSVTDVSTTSVEAVCTEAQVEGFVVVAVEDDVANDGCHIAVQGAGATPSFTGATLVVTFS*
Ga0055584_10132003013300004097Pelagic MarineMAQANPNAAVRAGSGFQGQTHILSVTDVSVVSVEAACLEAQNEGFVVVAVEDDVASDGCHIALQGAQATPSITGTTLVVTFG*
Ga0055584_10186642323300004097Pelagic MarineMAQSNPNAAVRAANGFVGTTHILEVDDVSSVTVEAACTEAQVEGFIVVAVEGLVSGSHIAVQGAAATPSIAGTTLIATFS*
Ga0055584_10216811423300004097Pelagic MarineMAQANPNADVRAANGLVGTTHVLSVDDVSTVSVKAACLEAQNEFFTVVAVEDDVANDGCHIVLQGGGATPSITGTTLVATFG*
Ga0065726_12483253300004369SalineMAQANPNAAVRAANGFVGKTFILEVDDVTSVTVEEACLEAQNEGFVVVAVEGLTSGSHIALQGASATPSITGATLIATFG*
Ga0065861_102362073300004448MarineMAQANPNAAVRAANGLVGTTHVLSVDDVSTVSVEAACLEAQNEFFTVVAVEDDVANDGCHIVLQGSGATPSITGTTLVATFG*
Ga0078893_10083774453300005837Marine Surface WaterMAQANPNAAVRAANGLVGTTHIMSVTDVSVNSVADVVAEAQAEGFIVVAIEDDVANDGCHIALQGAGATPSLTGASLVVTFS*
Ga0078893_1065225223300005837Marine Surface WaterMAQTNPNADVRAANGFVGKTHILAVSDVSVVSVKAACLEAQNEGFIVVAVEDDVANDGCHIALQGAGATPSITGTTLVATFG*
Ga0070743_1008316023300005941EstuarineMAQTNPNADVRAANGLVGTTHIMTVTDVSVNSVKAVCTEAQAEGFTVVAVEDDVANDGCHIAVQGAGATPSFTGATLVVTFG*
Ga0070743_1030331323300005941EstuarineMAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQNEGFVVVAIEDDVASDGCHIAVQGAGATPSFTGATLVVTFS*
Ga0070742_1011587623300005942EstuarineMAQTNPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQNEGFVVVAIEDDVASDGCHIAVQGAGATPSFTGATLVVTFS*
Ga0075474_1003108443300006025AqueousMAQANPNAAVRAANGFVGKTFILEVDDVSVVTVEAACLEAQNEGFVVVAVEGTTSGSHIALQGASATPSITGATLIATFG*
Ga0075478_1027335213300006026AqueousMAQANPNAAVRAANGFVGKTFILEVDDVSVVTVEAACLEAQNEGFVVVAVEGTTSGSHIALQGASSTPSITGATLIATFG*
Ga0075445_10000122423300006193MarineMAQANPNAAVRAANGFVGTTFILEVDDVTAVTVAAAVTEAQVEGFIVVAVEGIVSGSHIALQGAGATPSIGGTTLIATFD*
Ga0075503_164801633300006400AqueousMAQANPNAAVRAANGFVGQTHILSVDDVSVVSVEAACLEAQNEGFVVVAIEDDVASDGCHIALQGAQATPSITGTTLVVTFG*
Ga0075514_179196013300006403AqueousMAQANPNAAVRAGNGLGPRTDILEVDDVTAVTVEAACLEAQNEGFIVVGVEGLTSGSHIALQGAGKVPSITGCTLIATF
Ga0075515_1081415743300006404AqueousNPNAAVRAANGFVGTTHIMSVTDVSVVSVEAVCTEAQNEGFVVVAVENDVASDGCHIAVQGAGATPSFTGATLVVTFS*
Ga0098048_1000006373300006752MarineMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACAEAQNEGFVVVAVEGLVSGSHIAVQGAGATPSITGTTVIATFS*
Ga0098048_100016373300006752MarineMAQANPNAAVRAANGLVGTTHIMAVTDVSVKSVADVTAEAQAEGFTVVAIEDDVASDGCHIALQGAGATPSLTGATLVCVFS*
Ga0098054_121634713300006789MarineMAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVEDVTTEAQAEGFIVVAIEDDVANDGCHIALQGAGATPSLTGATLVVTFS*
Ga0098055_100511873300006793MarineMAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQAEGFIVVAIEDDVANDGCHIALQGAGATPSLTGATLVVTFS*
Ga0098055_102263153300006793MarineMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQVEGFVVVAVEGLVSGSHIAVQGAAATPSIAGTTLIATFG*
Ga0098055_103048443300006793MarineMAQANPNAAVRAANGLVGTTHIMAVTDVSVKSVADVTAEAQAEGFTVVAIEDDVASDGCHIALQGAGATPSLTGATLVVT
Ga0070749_1000503653300006802AqueousMAQANPNAAVRAANGFVGKTYILEVDDVSVVTVEAACTEAQNEGFVVVAVEGLASGNHIALQGASATPSITGATLIATFG*
Ga0075481_1000146053300006868AqueousMAQSNPNAAVRAANGFVGTTHIMSVTDVSVVSVEAVCTEAQNEGFVVVAVENDVASDGCHIAVQGAGATPSFTGATLVVTFS*
Ga0075479_1002797753300006870AqueousMAQANPNAAVRAANGFVGKTFILEVDDVSVVTVEAACLEAQNEGFVVVAVEGLTSGSHIALQGASATPSITGATLIATFG*
Ga0075479_1032157023300006870AqueousMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACLEAQNEGFIVVGVEGLTSGSHIALQGAGKVPSITGCTLIATFGG*
Ga0075475_1003020853300006874AqueousMAQANPNAAVRAANGFVGKTFILEVDDVSAVTVEAACLEAQNEGFVVVAVEGLTSGSHIALQGASATPSITGATLIATFG*
Ga0098060_107113013300006921MarineMAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQAEGFIVVAIEDDVASDGCHIALQGAGATPSLTGATLVVTFS*
Ga0098051_100271163300006924MarineMAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVEDVTTEAQAEGFIVVAIEDDVASDGCHIALQGAGATPSLTGATLVVTFS*
Ga0099849_100758553300007539AqueousMAQANPNAAVRAANGFVGQTHILSVDDVSVVSVEAACLEAQNEGFVVVAVEDDVASDGCHIALQGAQATPSITGTTLVVTFG*
Ga0102823_109259923300007692EstuarineMAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQAEGFIVVAIENDVASDGCHIAVQGAGATPSFTGATLVVTFS*
Ga0105739_111630613300007954Estuary WaterMAQTNPNADVRAANGLVGTTHIMTVTDVSVNSVKAVCTEAQAEGFTVVAVEDDVANDGCHIAVQGAGATPSFTGATLVVTF
Ga0102907_111933723300007962EstuarineMAQANPNAAVRAANGFVGTSHILEVDDVTAVTVEAACAEAQAEGFVVVAVEGVVSGSHIALQGAAATPSIGG
Ga0102960_127572223300009000Pond WaterMAQSNPNAAVRAANSLVGTTHILEVDDVTAVTVEAACTEAQVEGFVVVAVERLTSGSHIAVQGAGATPSITGTTLIATFS*
Ga0102810_110211123300009002EstuarineMAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQAEGFIVVAIENDVASDGCHIALQGAGATPSLTGATLVVTFS*
Ga0115566_1006942923300009071Pelagic MarineMAQANPNAAVRAANGFVGTTHIMAVTDVSAVSVEAVCTEAQVEGFVVVAVEDDVASDGCHIAVQGAAATPSFTGATLVVTFS*
Ga0102812_1014613913300009086EstuarineNPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQNEGFVVVAIEDDVASDGCHIAVQGAGATPSFTGATLVVTFS*
Ga0115545_131105623300009433Pelagic MarineMAQSNPNAAVRAANGLVGTTHILSVTDVSVVSVEAASLEAQNEGFVVVAVEGLVSGNHIAVQGAAATPSITGTTLI
Ga0115008_10000176423300009436MarineMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQVEGFVVVAVEGLVSGSHIAVQGAGATPAIAGTTIIATFS*
Ga0115008_1001449673300009436MarineMAQANPNADVRAANGLVGTTHVLSVDDVSTVSVKAACLEAQNEFFTVVAVEDDVSNDGCHIVLQGGGATPSITGTTLVATFG*
Ga0129348_101759953300010296Freshwater To Marine Saline GradientMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACLEAQNEGFVVVAVEGLTSGSHIAVQGAGKTPSITGTTIIATFTD*
Ga0133547_1133836513300010883MarineGQTRVNGFTEDLNGFAGTTHILSVDDVSVNSVEAVCTEAQVEGFIVVAIEDLVATDGCHIAVQGAGATPLFTGATLVVTFS*
Ga0129353_179827523300012525AqueousMAQANPNAAVRASNGLGPRTDILEVDDVTAVTVEAACLEAQNEGFIVVGVEGLTSGSHIALQGAGKVPSITGCTLIATFGG*
Ga0129352_1076034513300012528AqueousMAQANPNAAVRAANGFVGKTFILEVDDVSAVTVEAACLEAQNEGFVVVAVEGLTSGSHIALQGASATPSITGATLIAT
Ga0160423_1000598173300012920Surface SeawaterMAQANPNADVRAANGLVGTTHILSVTDVSVVSVAAACLEAQNEGFVVVAVEDDVTNDGCHIALQGGAATPSITGTSLVVTFS*
Ga0163109_1007777253300012936Surface SeawaterMAQANPNADVRAANGFVGKTHILAVSDVSAVSVKAACLEAQNEGFIVVAVEDDVANDGCHIALQGAGATPSITGTTLVATFG*
Ga0163179_1017696733300012953SeawaterMAQTNPNADVRAANGFVGKTHILAVSDVSVVSVKAACLEAQNEGFIVVAVEDDVANDGCHIALQGAGATPSITGTTLV
Ga0163111_1019056933300012954Surface SeawaterMAQANPNAAVRAANGLVGTTHILAVSDVSVVSVADACLEAQNEGFIVVAVEDDISSDGCHIALQGGAATPSITGTSLVVTFS*
Ga0182096_106948323300016740Salt MarshMAQANPNAAVRAANGFVGKTYILEVDDVSVVTVEAACLEAQNEGFVVVGVEGLTSGSHIALQGAGAT
Ga0182096_118271433300016740Salt MarshMAQANPNAAVRASNGLGPRTDILEVDDVSVVTVEAACLEAQNEGFVVVGVEGLTSGSHIALQGAGAT
Ga0181377_106475513300017706MarineMAQANPNADVRAANGFVGTTHIMAVTDVSVVSVKAVCTEAQAEGFIVVAVEDDIANDGCHIAVQGAGATPSFTGATLVVTFS
Ga0181377_106475613300017706MarineMAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQAEGFIVVAIEDDVANDGCHIALQGAGATPSLTGATLVVKFS
Ga0181387_110712823300017709SeawaterMAQTNPNADVRAANSLVGTTHIMAVTDVSAVSVKAVCTEAQNEGFTVVAVENDVANDGCHIAVQGAGATPSFTGAT
Ga0181373_106836623300017721MarineMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQVEGFIVVAVEGLTSGSHIAVQGAAATPSITGTTLIATFS
Ga0181388_102553933300017724SeawaterMAQANPNAAVRAANGLVGTTHIMSVTDVSTKSVADVTAEAQAEGFIVVAIEDDVASDGCHIALQGAGATPSLTGATLVVTFS
Ga0181418_102228843300017740SeawaterMAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQAEGFTVVAIEDDVASDGCHIALQGAGATPSLTGATLVCVFS
Ga0181418_112394323300017740SeawaterMAQTNPNADVRAANSLVGTTHIMAVTDVSAVSVKAVCTEAQNEGFTVVAVENDVANDGCHIAVQGAGATPSFTGATLVV
Ga0181402_109232313300017743SeawaterAANGFVGTTHIIAVTDVSAVSVKAVCTEAQNEGFTVVAVENDVANDGCHIAVQGAGATPSFTGATLVVTFS
Ga0187219_114731413300017751SeawaterMAQTNPNADVRAANGLVGTTHIMTVTDVSVNSVKAVCTEAQAEGFTVVAVEDDVANDGCHIAVQGAGATPSFTGATLVVTFS
Ga0181407_115049613300017753SeawaterMAQANPNAAVRAANGLVGTTHIMSVTDVSTNSVADVTAEAQAEGFIVVAIENDVASDGCHIALQGAGATPSLTGATLVVTFG
Ga0181410_100819173300017763SeawaterAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQAEGFTVVAIEDDVASDGCHIALQGAGATPSLTGATLVCVFS
Ga0187217_126710213300017770SeawaterMAQANPNAAVRAANGLVGTTHIMTVTDVSVNSVKAVCTEAQNEGFVVVAIEDDVASDGCHIAVQGAGATPSFTGATLVVTFG
Ga0181386_100145573300017773SeawaterMAQTNPNADVRAANGFVGTTHIIAVTDVSAVSVKAVCTEAQNEGFTVVAVENDVANDGCHIAVQGAGATPSFTGATLVVTFS
Ga0181394_112047313300017776SeawaterMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACAEAQNEGFVVVAVEGLTSGSHIAVQGAAATPSITGTTLIATFS
Ga0181565_1001603763300017818Salt MarshMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEEACLEAQNEGFVVVAVEGLTSGSHIAVQGAGATPSISGTTVIATFS
Ga0181565_1013510323300017818Salt MarshMAQANPNAAVRAGSGFQGQTHILSVDDVSTVSVEAACLEAQNEGFVVVAVEDDVANDGCHIALQGAQATPSITGTTLVVTFG
Ga0181565_1063703523300017818Salt MarshMAQSNPNAAVRAANGFVGTTHILEVDDVTAVTVEEACLEAQNEGFVVVAVEGLTSGSHIAVQGAGATPSITGTTVIA
Ga0181552_10003684163300017824Salt MarshMAQANPNAAVRAANGFVGQTHILSVDDVSTVSVEAACLEAQNEGFVVVAIEDDVASDGCHIALQGAQATPSITGTTLVVTFG
Ga0181552_1008675323300017824Salt MarshMAQANPNAAVRASNGLGPRTDILEVDDVTAVTVEAACLEAQNEGFVVVGVEGLTSGSHIALQGAGATPSITGATLIATFGG
Ga0181584_1013210213300017949Salt MarshMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEEACLEAQNEGFVVVAVEGLTSGSHIAVQGAGATPSISGTTVIATFDA
Ga0181584_1023344523300017949Salt MarshMAQSNPNAAVRAANGFAGTTHILEVSNVSVVTTEAACLEAQNEGFVVVAVEGTSTGDHIAVQGAGATPSITGTTVVATFNA
Ga0181607_1010802623300017950Salt MarshMAQANPNAAVRAANGLVGTTHILSVTDVSTVSVEAACLEAQNEGFVVVAIEDDVASDGCHIALQGAAATPSITGTSLVVTFA
Ga0181577_1005021553300017951Salt MarshMAQANPNAAVRAANGFVGTTHILEVDDVTSVTVEEACLEAQNEGFVVVAVEGLTSGSHIAVQGAAATPSITGATLIATFS
Ga0181583_1013150753300017952Salt MarshMAQANPNAAVRAGSGFQGQTNILSVADVSVVSVEAACLEEQNEGIVVVAVEDDVANDGCHIALQGAQATPSITGTTLVVTFG
Ga0181583_1018856113300017952Salt MarshMAYGITDTRAVAAGNGLGGKTHVLTVDDVSAVSVATAVAEAQYEGFTVVAVEDDIASDGCHIALQGTATPSIGGCTLVVTFDQNPA
Ga0181580_1000136273300017956Salt MarshMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEEACTEAQNEGFVVVAVEGLSSGSHIAVQGAGATPSITGTTLIATFS
Ga0181580_1001376663300017956Salt MarshMAQANPNAAVRAGSGFQGQTHILSVDDVSVVSVEAACLEAQNEGFVVVAVEDDVTNDGCHIALQGAQATPSITGTTLVVTFG
Ga0181580_1012508413300017956Salt MarshMAQANPNAAVRAANGFVGKTYILEVDDVSVVTVEAACLEAQNEGFVVVAVEGLASGNHIALQGASATPSITGATLIATFG
Ga0181571_1011091653300017957Salt MarshFVGTTHILEVDDVTSVTVEEACLEAQNEGFVVVAVEGLTSGSHIAVQGAAATPSITGATLIATFS
Ga0181590_1009809413300017967Salt MarshMAYGITDTRAVAAGNGLGGKTHVLTVDDVSAVSVATAVAEAQYEGFTVVAVEDDIASDGCHIALQGTATPSIGGCTLVVTF
Ga0181590_1099341023300017967Salt MarshMAQANPNAAVRAANGFVGQTHILSVDDVSTVSVEAACLEAQNEGFVVVAIEDDVASDGCHIALQGAQATPSITGTT
Ga0181569_1000669953300017986Salt MarshMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEEACLEAQNEGFVVVAVEGLTSGSHIAVQGAAATPSITGATLIATFS
Ga0181579_1019100313300018039Salt MarshMAQSNPNAAVRAANGFAGTTHILEVSNVSVVTTEAACLEAQNEGFVVVAVEGLTSGSHIAVQGAGATPSISGTTVIATFDA
Ga0181572_1043154913300018049Salt MarshRRNKMAYGITDTRAVAAGNGLGGKTHVLTVDDVSAVSVATAVAEAQYEGFTVVAVEDDIASDGCHIALQGTGTPSITGCTLVVTFDQNPA
Ga0181592_1001607463300018421Salt MarshMAQSNPNAAVRAANGFAGTTHILEVSNVSVVTTEAACLEAQNEGFVVVAVGGTSTGDHIAVQGAGATPSITGTTVVATFNA
Ga0181566_1051068323300018426Salt MarshMAQSNPNAAVRAANGFAGTTHILEVSNVSVVTTEAACLEAQNEGFVVVAVEGTSTGDHIAVQGAGATPSITGTTVVATFNV
Ga0181568_1080683923300018428Salt MarshMAQANPNAAVRAANGFVGTTHILEVDDVTSVTVEAACAEAQNEGFVVVAVEGLTSGSHIAVQGAGATPSIGGTTVIATFS
Ga0182077_106743723300019281Salt MarshMAQANPNAAVRAANGFVGKTYILEVDDVTAVTVEEACLEAQNEGFVVVAVEGLTSGSHIAVQGAGATPSISGTTVIATFDA
Ga0182075_157965413300019282Salt MarshRIKMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEEACTEAQNEGFVVVAVEGLSSGSHIAVQGAGATPSITGTTLIATFS
Ga0194029_100016093300019751FreshwaterMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACAEAQVEGFVVVAVEGLVSGSHIAVQGAAATPSITGTTLIATFG
Ga0181575_1065571123300020055Salt MarshMAQANPNAAVRAGSGFQGQTHILSVDDVSTVSVEAACLEAQNEGFVVVAVEDDVANDGCHIALQGAQATPSI
Ga0206124_1023812913300020175SeawaterNGFVGTTHILEVDDVTAVTVEAACTEAQVEGFIVVAVEGLTSGSHIAVQGAAATPSITGTTLIATFS
Ga0181599_136836013300020178Salt MarshRIKMAQANPNAAVRAANGLVGTTHILSVTDVSTVSVEAACLEAQNEGFVVVAIEDDVASDGCHIALQGAAATPSITGTSLVVTFA
Ga0206131_1002471653300020185SeawaterMAQANPNAAVRAANGLVGTTHVLSVDDVSTVSVEAACLEAQNEFFTVVAVEDDVANDGCHIVLQGSGATPSITGTTLVATFG
Ga0206131_1009552113300020185SeawaterMAQANPNAAVRAANGFVGTTHIMAVTDVSAVSVEAVCTEAQVEGFVVVAVEDDVASDGCHIAVQGAAATPSFTGATLVVTFS
Ga0206131_1014302933300020185SeawaterMAQSNPNAAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQVEGFIVVAVEGLTSGSHIAVQGAAATPSITGTTLIATFS
Ga0211504_106574713300020347MarineMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQAEGFVVVAVEGVVSGSHIALQGAGATPSITGTTLIATFS
Ga0211636_1014731623300020400MarineMAQANPNAAVRAANGLVGTTHILSVDDVSTVSVEAACLEAQNEGFVVVAVEDDVSNDGCHIALQGAQATPSITGTTLVVTFG
Ga0211617_1000623753300020401MarineMAQANPNAAVRAANGLVGTTHILSVDDVSSVSVEAACLEAQNEGFVVVAVEDDVSNDGCHIALQGAAATPSITGTTLVVTFG
Ga0211576_1010895353300020438MarineMAQTNPNADVRAANSLVGTTHIMAVTDVSAVSVKAVCTEAQNEGFTVVAVENDVANDGCHIAVQGAGATPSFTGATLVVTFG
Ga0211559_1004835243300020442MarineMALANPNAAVRAGSGFQGQTHILSVTDVSVVSVEAACLEAQNEGFVVVAVEDDITNDGCHIALQGASATPSITGTSLVVTFG
Ga0211676_1032496633300020463MarineMAQANPNAAVRAANGLVGTTHILSVDDVTAVTVEAACAEAQVEGFVVVAVEGLASGNHIALQGAAATPSITGTTLVATFG
Ga0211577_1002316773300020469MarineMAQTNPNADVRAANGFVGTTHIIAVTDVSAVSVKAVCTEAQNEGFIVVAVEDDIASDGCHIAVQGAGATPSFTGATLVVTFS
Ga0211577_1002684653300020469MarineMAQTNPNADVRAANSLVGTTHIMAVTDVSAVSVKAVCTEAQNEGFTVVAVENDVANDGCHIAVQGAGATPSFTGATLVVTFS
Ga0211577_1009107433300020469MarineMAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQNEGFVVVAIEDDVASDGCHIAVQGAGATPSFTGATLVVTFS
Ga0211547_1003140673300020474MarineMAQTNPNADVRAANGFVGKTHILAVSDVSVVSVKAACLEAQNEGFIVVAVEDDVANDGCHIALQGAGATPSITGTTLVATFG
Ga0181598_101533253300020810Salt MarshMAQANPNAAVRASNGLGPRTDILEVDDVTSVTVEAACLEAQNEGFVVVGVEGLTSGSHIALQGAGATPSITGATLIATFGG
Ga0206678_1020093513300021084SeawaterMAQTNPNAAVRAASGFAGQTHIMAVTDVSVVSVADACAEAQAEGFIVVAVEDDVASDGCHIALQGASATPSVTGTTLVVTFG
Ga0206677_10000015693300021085SeawaterMAQANPNAAVRAANGLVGTTHIMSVTDVSTNSVADVTAEAQAEGFIVVAIEDDVANDGCHIALQGAGATPSLTGATLVVTFG
Ga0206677_1006714613300021085SeawaterMAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVEDVTTEAQAEGFIVVAIEDDVASDGCHIALQGAGATPSLTGATLVVTFS
Ga0206679_1033304323300021089SeawaterKLRRIKMAQTNPNAAVRAASGFAGQTHIMAVTDVSVVSVADACAEAQAEGFIVVAVEDDVASDGCHIALQGASATPSVTGTTLVVTFG
Ga0206687_137073323300021169SeawaterMAQANPNAAVRAANGLVGTTHIMSVTDVSTKSVADVTAEAQAEGFIVVAIEDDVANDGCHIALQGAGATPSLTGATLVVTFG
Ga0206682_1001031863300021185SeawaterMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQVEGFVVVAVSGLVSGSHIAVQGAAATPSIAGTTLIATFG
Ga0213867_116351023300021335SeawaterMAQANPNAAVRAANGFVGTTHILEVDDVTSVTVEAACLEAQNEGFVVVAVEGLTSGSHIAVQGAGATPSITGTTVIATFS
Ga0213862_1015696923300021347SeawaterMAQSNPNAAVRAANGLVGTTHILSVTDVSTVSVEAACLEAQNEGFVVVAIEDDVASDGCHIALQGAAATPSITGTSLVVTFA
Ga0213858_1001936043300021356SeawaterMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEEACTEAQNEGFVVVAVEGLTSGSHIAVQGAGATPSITGTTVIATFNA
Ga0213858_1019132423300021356SeawaterMAQANPNAAVRAANGLVGTTHILSVTDVSVVSVEDACVEAQNEGFVVVAVEDDITNDGCHIALQGGAATPSITGTSLVVTFS
Ga0213858_1021257933300021356SeawaterMAQSNPNAAVRAANGFVGKTYILEVDDVSVVTVEAACLEAQNEGFVVVAVEGTSSGDHIALQGASA
Ga0213858_1026230923300021356SeawaterMAQANPNAAVRAANGFVGKTFILEVDDVTAVTVEAACLEAQNEGFVVVAVEGLTSGSHIALQGASATPSITGATLIATFG
Ga0213859_1047289223300021364SeawaterMAQANPNAAVRAANGLVGTTHILSVTDVSVVSVEDACVEAQNEGFVVVAIEDDISSDGCHIALQGAAATPSITGT
Ga0206123_1009803213300021365SeawaterSNPNAAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQVEGFIVVAVEGLTSGSHIAVQGAAATPSITGTTLIATFS
Ga0206123_1024411223300021365SeawaterMAQANPNAAVRAANGFVGTTHIMAVTDVSAVSVEAVCTEAQVEGFVVVAVEDDVASDGCHIAVQGAGATPSFTGATLVVTFS
Ga0213860_1002100353300021368SeawaterMAQANPNAAVRAANGLVGTTHILSVTDVSVVSVEDACVEAQNEGFVVVAIEDDISSDGCHIALQGAAATPSITGTSLVVTFS
Ga0213860_1016242833300021368SeawaterMAQANPNAAVRASNGLGPHTDILEVDDVTAVTVEAACLEAQNEGFVVVGVEGLTSGSHIAVQGAGATPSITGTTVIATFTD
Ga0213869_1000089663300021375SeawaterMAQSNPNAAVRAANGFVGTTHIMSVTDVSTTSVEAVCTEAQVEGFVVVAVEDDVASDGCHIAVQGAGATPSFTGATLVVTFS
Ga0213869_1001492953300021375SeawaterMAQANPNAAVRAANGFVGKTYILEVDDVSVVTVEAACTEAQNEGFVVVAVEGVASGNHIALQGASATPSITGATLIATFG
Ga0213869_1001517473300021375SeawaterMAQSNPNAAVRAANGFVGTTHILEVDDVTSVTVEAACTEAQVEGFVVVAVEGLTSGSHIAVQGAGATPSIAGATLIATFS
Ga0213869_1001747563300021375SeawaterMAQANPNAAVRAGSGFQGQTHILSVTDVSVVSVEAACLEAQNEGFVVVAVEDDVASDGCHIALQGAQATPSITGTTLVVTFG
Ga0213869_1012788543300021375SeawaterMAQANPNADVRAANSLVGTTHIMAVTDVSTTSVKAVCTEAQNEGFTVVAVENDVANDGCHIAVQGAGATPSFTGATLVVTFS
Ga0213861_1015651913300021378SeawaterMAQSNPNAAVRAANGLVGTTHILSVTDVSTVSVEAACLEAQNEGFVVVAIEDDVANDGCHIALQGAAATPSITGTSLVVTFA
Ga0213861_1020027313300021378SeawaterMAQANPNAAVRAANSLVGTTHILEVDDVTSVTVEAACTEAQNEGFVVVAVEGLTSGSHIAVQGAGATPSITGATLIATFS
Ga0213864_1031779813300021379SeawaterMAQSNPNAAVRAANGLVGTTHILEVDDVTSVTVEAACAEAQNEGFVVVAVEGLTSGSHIAVQGAGATPSIGGT
Ga0222717_1000134013300021957Estuarine WaterMAQTNPNADVRAANGLVGTTHIMTVTDVSVNSVKAVCTEAQAEGFTVVAVEDDVANDGCHIAVQGAGATPSFTGATLVVTFG
Ga0222717_1006138733300021957Estuarine WaterMAQSNPNAAVRAANSLVGTTHILEVDDVTAVTVEAACTEAQVEGFVVVAVEGLTSGSHIAVQGAGATPSITGTTLIATFS
Ga0222718_1005267913300021958Estuarine WaterMAQSNPNAAVRAANGFVGTTHILEVDDVSSVTVEAACTEAQVEGFIVVAVEGLVSGSHIAVQGAAATPSIAGTTLIATFS
Ga0222716_10005642103300021959Estuarine WaterPNAAVRPANGFDGTTHILSVDDVSVNSVEAVCTEAQVEGFVVIAIEDLVTTDGCHIAVQGASAIPSFTGATLVVTFS
Ga0222716_1048144313300021959Estuarine WaterPNAAVRAANGFVGTTHILEVDDVSSVTVEAACTEAQVEGFVVVAVEGLVSGSHIAVQGAGATPSITGTTVIATFS
Ga0222714_1042132523300021961Estuarine WaterMALTTTAAYTAGNGLGPKTHVLTVDDVSSVSVATAAAEAQNEGFTVAAIEDDISNDGCHMVLQGSGTPSITGCTLVVSFG
Ga0222719_1049045423300021964Estuarine WaterMAQSNPNAAVRAANGFAGTTHILEVSNVSVVTTEAACLEAQNEGFIVVAVEGTSTGDHIAVQGAGATPSITGTSVVATFNA
(restricted) Ga0233426_1014348233300022920SeawaterMAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQAEGFIVVAIENDVASDGCHIALQGAGATPSLTGATLVVTFS
Ga0255769_1009651053300022927Salt MarshIKMAQANPNAAVRAANGLVGTTHILSVTDVSTVSVEAACLEAQNEGFVVVAIEDDVASDGCHIALQGAAATPSITGTSLVVTFA
Ga0255774_1032002813300023087Salt MarshFVGTTHILEVDDVTAVTVEEACLEAQNEGFVVVAVEGLTSGSHIAVQGAAATPSITGATLIATFS
(restricted) Ga0233432_1025400033300023109SeawaterMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACAEAQVEGFVVVAVEGLVGGSHIAVQGAGATP
Ga0255766_1013348453300023172Salt MarshAAVRAANGFVGKTYILEVDDVSVVTVEAACLEAQNEGFVVVAVEGLASGNHIALQGASATPSITGATLIATFG
Ga0255776_1028748313300023173Salt MarshMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEEACLEAQNEGFVVVAVEGLTSGSHIAVQGAGATPSI
(restricted) Ga0233444_1008610413300024264SeawaterAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQAEGFIVVAIENDVASDGCHIALQGAGATPSLTGATLVVTFS
(restricted) Ga0233443_125462213300024324SeawaterNMAQANPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQAEGFIVVAIENDVASDGCHIALQGAGATPSLTGATLVVTFS
Ga0244777_1011206913300024343EstuarineAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQVEGFVVVAVSGLVSGSHIAVQGAAATPSIAGTTLIATFG
Ga0208667_1000461173300025070MarineMAQANPNAAVRAANGLVGTTHIMAVTDVSVKSVADVTAEAQAEGFTVVAIEDDVASDGCHIALQGAGATPSLTGATLVCVFS
Ga0208667_100056073300025070MarineMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACAEAQNEGFVVVAVEGLVSGSHIAVQGAGATPSITGTTVIATFS
Ga0208298_101668233300025084MarineMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQVEGFVVVAVEGLVSGSHIAVQGAAATPSIAGTTLIATFG
Ga0208793_112325813300025108MarineAANGFVGTTHIMAVTDVSVKSVADVTAEAQAEGFIVVAIEDDVANDGCHIALQGAGATPSLTGATLVVTFS
Ga0209535_106375733300025120MarineMAQTNPNAAVRAANGFVGTTHILEVDNVSVVTVEAACTEAQVEGFVVVAVTGVVSGSHIALQGAGATPSITGTTLIATFS
Ga0209634_1000389143300025138MarineMAQANPNADVRAANGFVGTTHIMAVTDVSAVSVKAVCTEAQVEGFIVVAVENDIASDGCHIAVQGAGATPSFTGATLVVTFS
Ga0209634_100823023300025138MarineMAQANPNADVRAANGFVGTTHILEVDNVSAVTVKAACTEAQVEGFIVVAVTGVVSGSHIALQGAGATPSIAGTTLIATFS
Ga0208428_100066763300025653AqueousMAQANPNAAVRAANGFVGKTFILEVDDVSVVTVEAACLEAQNEGFVVVAVEGTTSGSHIALQGASATPSITGATLIATFG
Ga0208428_100408963300025653AqueousMAQSNPNAAVRAANGFVGTTHIMSVTDVSVVSVEAVCTEAQNEGFVVVAVENDVASDGCHIAVQGAGATPSFTGATLVVTFS
Ga0208428_106380423300025653AqueousMAQANPNAAVRAANGFVGQTHILSVDDVSVVSVEAACLEAQNEGFVVVAIEDDVASDGCHIALQGAQATPSITGTTLVVTFG
Ga0208162_102576623300025674AqueousMAQANPNAAVRAANGFVGQTHILSVDDVSVVSVEAACLEAQNEGFVVVAVEDDVASDGCHIALQGAQATPSITGTTLVVTFG
Ga0208150_103399553300025751AqueousMAQANPNAAVRAANGFVGKTFILEVDDVSAVTVEAACLEAQNEGFVVVAVEGLTSGSHIALQGASATPSITGATLIATFG
Ga0208899_101316353300025759AqueousMAQANPNAAVRAANGFVGKTYILEVDDVSVVTVEAACTEAQNEGFVVVAVEGLASGNHIALQGASATPSITGATLIATFG
Ga0208427_118720123300025771AqueousMAQANPNAAVRAANGFVGKTFILEVDDVSAVTVEAACLEAQNEGFVVVAVEGLTSGSHIALQGA
Ga0209932_112603823300026183Pond WaterMAQSNPNAAVRAANSLVGTTHILEVDDVTAVTVEAACTEAQVEGFVVVAVERLTSGSHIAVQGAGATPSITGTTLIATFS
Ga0208971_103654333300027582MarineMAQANPNADVRAANGLVGTTHVLSVDDVSTVSVKAACLEAQNEFFTVVAVEDDVANDGCHIVLQGGGATPSITGTTLVATFG
Ga0209383_1000129583300027672MarineMAQANPNAAVRAANGFVGTTFILEVDDVTAVTVAAAVTEAQVEGFIVVAVEGIVSGSHIALQGAGATPSIGGTTLIATFD
Ga0208305_1005815323300027753EstuarineMAQTNPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQNEGFVVVAIEDDVASDGCHIAVQGAGATPSFTGATLVVTFS
Ga0209092_10000372143300027833MarineMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQVEGFVVVAVEGLVSGSHIAVQGAGATPAIAGTTIIATFS
Ga0209092_1002732133300027833MarineMAQANPNADVRAANGLVGTTHVLSVDDVSTVSVKAACLEAQNEFFTVVAVEDDVSNDGCHIVLQGGGATPSITGTTLVATFG
Ga0257127_117213813300028189MarineMAQTNPNAAVRAANGFVGTTHIMAVTDVSVKSVADVTAEAQNEGFVVVAIEDDVASDGCHIAVQGAGATPSFTGAT
Ga0307488_10000941253300031519Sackhole BrineMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACTEAQAEGFIVVAVEGLVSGNHIAVQGAGATPSITGTTLIATFS
Ga0307998_114538313300031702MarineMAQANPNAAVRAANGFVGTTHILEVDDVTAVTVEAACAEAQVEGFVVVAVEGLVSGSHIAVQGAGATPAIGGTTIIATFS
Ga0315322_1046350923300031766SeawaterMAQANPNADVRAANGFVGTTHIIAVTDVSAVSVKAVCTEAQNEGFIVVAVEDDIANDGCHIAVQGAGATPSFTGATLVVTFS
Ga0315331_1006982013300031774SeawaterITMAQANPNAAVRAANGLVGTTHIMSVTDVSTNSVADVTAEAQAEGFIVVAIEDDVANDGCHIALQGAGATPSLTGATLVVTFG
Ga0315334_1130193013300032360SeawaterMAQTNPNAAVRAASGFAGQTHIMAVTDVSVVSVADACSEAQAEGFIVVAVEDDVASDGCHIALQGASATPSVTGTTLVVTFG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.