Metagenome / Metatranscriptome Family F029352

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F029352
Family Type	Metagenome / Metatranscriptome
Number of Sequences	188
Average Sequence Length	57 residues
Representative Sequence	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGTGGS
Number of Associated Samples	103
Number of Associated Scaffolds	188

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.96 %
% of genes near scaffold ends (potentially truncated)	43.62 %
% of genes from short scaffolds (< 2000 bps)	88.83 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.574 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.617 % of family members)
Environment Ontology (ENVO)	Unclassified (66.489 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.532 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 80.36% β-sheet: 0.00% Coil/Unstructured: 19.64%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 188 Family Scaffolds
PF00072	Response_reg	29.79
PF03729	DUF308	2.66
PF04392	ABC_sub_bind	1.60
PF13676	TIR_2	1.06
PF14347	DUF4399	1.06
PF08592	Anthrone_oxy	1.06
PF00580	UvrD-helicase	0.53
PF04226	Transgly_assoc	0.53
PF08734	GYD	0.53
PF01068	DNA_ligase_A_M	0.53
PF04546	Sigma70_ner	0.53
PF00753	Lactamase_B	0.53

COG ID	Name	Functional Category	% Frequency in 188 Family Scaffolds
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	2.66
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.60
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.53
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.53
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.53
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.53
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.53
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.53
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.53
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.57 %
Unclassified	root	N/A	40.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.57 %
Unclassified	root	N/A	40.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.57 %
Unclassified	root	N/A	40.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.06 %
Unclassified	root	N/A	40.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.53 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	51.06 %
Unclassified	root	N/A	40.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.91 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.19 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.13 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.60 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.66 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.13 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.60 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.79 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.13 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.60 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.53 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.79 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.13 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.60 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	0.53 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.53 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002917\|JGI25616J43925_10091289	Not Available	1265	Open in IMG/M
3300004268\|Ga0066398_10081746	Not Available	718	Open in IMG/M
3300004633\|Ga0066395_10651179	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005332\|Ga0066388_100859481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1491	Open in IMG/M
3300005332\|Ga0066388_102273892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	980	Open in IMG/M
3300005332\|Ga0066388_102782684	Not Available	893	Open in IMG/M
3300005332\|Ga0066388_103241544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	831	Open in IMG/M
3300005332\|Ga0066388_103604522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300005332\|Ga0066388_104405149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	717	Open in IMG/M
3300005332\|Ga0066388_105910754	Not Available	618	Open in IMG/M
3300005363\|Ga0008090_10155425	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300005468\|Ga0070707_100451821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1245	Open in IMG/M
3300005586\|Ga0066691_10801256	Not Available	555	Open in IMG/M
3300005713\|Ga0066905_100822085	Not Available	807	Open in IMG/M
3300005713\|Ga0066905_101294736	Not Available	655	Open in IMG/M
3300005713\|Ga0066905_101551814	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005764\|Ga0066903_101667239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1212	Open in IMG/M
3300005764\|Ga0066903_101750125	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300005764\|Ga0066903_102175028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1069	Open in IMG/M
3300005764\|Ga0066903_102388672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1022	Open in IMG/M
3300005764\|Ga0066903_102545845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	991	Open in IMG/M
3300005764\|Ga0066903_103419369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300005764\|Ga0066903_103625388	Not Available	831	Open in IMG/M
3300005764\|Ga0066903_104020168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	788	Open in IMG/M
3300005764\|Ga0066903_104342855	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005764\|Ga0066903_105951331	Not Available	639	Open in IMG/M
3300005764\|Ga0066903_107393804	Not Available	567	Open in IMG/M
3300005764\|Ga0066903_107605426	Not Available	558	Open in IMG/M
3300005764\|Ga0066903_108501751	Not Available	523	Open in IMG/M
3300005764\|Ga0066903_108527183	Not Available	522	Open in IMG/M
3300005764\|Ga0066903_109149910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300006028\|Ga0070717_10032810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4186	Open in IMG/M
3300006028\|Ga0070717_11469377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	618	Open in IMG/M
3300006871\|Ga0075434_101676359	Not Available	644	Open in IMG/M
3300009012\|Ga0066710_101400481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1083	Open in IMG/M
3300009162\|Ga0075423_11618233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300009792\|Ga0126374_10451817	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300009792\|Ga0126374_10740318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	744	Open in IMG/M
3300009792\|Ga0126374_11520256	Not Available	550	Open in IMG/M
3300010043\|Ga0126380_10413541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1006	Open in IMG/M
3300010046\|Ga0126384_12243636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300010047\|Ga0126382_10056482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2331	Open in IMG/M
3300010047\|Ga0126382_10267564	Not Available	1263	Open in IMG/M
3300010047\|Ga0126382_11705082	Not Available	589	Open in IMG/M
3300010048\|Ga0126373_12236159	Not Available	608	Open in IMG/M
3300010359\|Ga0126376_11070672	Not Available	812	Open in IMG/M
3300010360\|Ga0126372_11291706	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300010361\|Ga0126378_10310772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1681	Open in IMG/M
3300010361\|Ga0126378_11174463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	866	Open in IMG/M
3300010361\|Ga0126378_11473071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	771	Open in IMG/M
3300010366\|Ga0126379_11015930	Not Available	934	Open in IMG/M
3300010398\|Ga0126383_11313128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300010398\|Ga0126383_11497173	Not Available	765	Open in IMG/M
3300012198\|Ga0137364_10628720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300012211\|Ga0137377_10059129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3562	Open in IMG/M
3300012357\|Ga0137384_11386503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300012362\|Ga0137361_10417404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1233	Open in IMG/M
3300012948\|Ga0126375_11724039	Not Available	544	Open in IMG/M
3300012971\|Ga0126369_13522035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300012989\|Ga0164305_10531614	Not Available	932	Open in IMG/M
3300016270\|Ga0182036_11350297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	596	Open in IMG/M
3300016270\|Ga0182036_11731203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300016294\|Ga0182041_10685550	Not Available	907	Open in IMG/M
3300016294\|Ga0182041_10972725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	766	Open in IMG/M
3300016294\|Ga0182041_11562356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300016341\|Ga0182035_10650999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300016341\|Ga0182035_11935413	Not Available	535	Open in IMG/M
3300016357\|Ga0182032_10273381	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300016357\|Ga0182032_12032940	Not Available	504	Open in IMG/M
3300016371\|Ga0182034_10192858	Not Available	1569	Open in IMG/M
3300016371\|Ga0182034_10264730	Not Available	1363	Open in IMG/M
3300016387\|Ga0182040_11411861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300016387\|Ga0182040_11692038	Not Available	540	Open in IMG/M
3300016422\|Ga0182039_10269436	Not Available	1396	Open in IMG/M
3300016445\|Ga0182038_10271387	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1374	Open in IMG/M
3300016445\|Ga0182038_11618928	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300021560\|Ga0126371_13036028	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300025922\|Ga0207646_10377470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1281	Open in IMG/M
3300031543\|Ga0318516_10127074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1456	Open in IMG/M
3300031543\|Ga0318516_10155026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1316	Open in IMG/M
3300031543\|Ga0318516_10522384	Not Available	680	Open in IMG/M
3300031544\|Ga0318534_10585755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300031545\|Ga0318541_10057074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2019	Open in IMG/M
3300031545\|Ga0318541_10131538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1364	Open in IMG/M
3300031545\|Ga0318541_10146155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1295	Open in IMG/M
3300031546\|Ga0318538_10017771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3110	Open in IMG/M
3300031546\|Ga0318538_10097295	Not Available	1515	Open in IMG/M
3300031546\|Ga0318538_10171718	Not Available	1151	Open in IMG/M
3300031546\|Ga0318538_10444839	Not Available	702	Open in IMG/M
3300031573\|Ga0310915_10064121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2404	Open in IMG/M
3300031573\|Ga0310915_10119735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1796	Open in IMG/M
3300031573\|Ga0310915_10138553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1675	Open in IMG/M
3300031573\|Ga0310915_10146914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1628	Open in IMG/M
3300031573\|Ga0310915_10556219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	814	Open in IMG/M
3300031573\|Ga0310915_10747141	Not Available	689	Open in IMG/M
3300031640\|Ga0318555_10244253	Not Available	970	Open in IMG/M
3300031668\|Ga0318542_10055211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1816	Open in IMG/M
3300031679\|Ga0318561_10080203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1689	Open in IMG/M
3300031680\|Ga0318574_10222349	Not Available	1088	Open in IMG/M
3300031681\|Ga0318572_10446029	Not Available	770	Open in IMG/M
3300031713\|Ga0318496_10397296	Not Available	762	Open in IMG/M
3300031719\|Ga0306917_11061372	Not Available	631	Open in IMG/M
3300031719\|Ga0306917_11254026	Not Available	574	Open in IMG/M
3300031719\|Ga0306917_11309218	Not Available	560	Open in IMG/M
3300031724\|Ga0318500_10305243	Not Available	780	Open in IMG/M
3300031724\|Ga0318500_10355290	Not Available	724	Open in IMG/M
3300031736\|Ga0318501_10244786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	947	Open in IMG/M
3300031736\|Ga0318501_10279858	Not Available	887	Open in IMG/M
3300031744\|Ga0306918_10009597	All Organisms → cellular organisms → Bacteria	5428	Open in IMG/M
3300031744\|Ga0306918_10039338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3063	Open in IMG/M
3300031744\|Ga0306918_10090799	All Organisms → cellular organisms → Bacteria	2150	Open in IMG/M
3300031744\|Ga0306918_10231813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1403	Open in IMG/M
3300031744\|Ga0306918_10431358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1029	Open in IMG/M
3300031744\|Ga0306918_10965807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	662	Open in IMG/M
3300031747\|Ga0318502_10081998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1759	Open in IMG/M
3300031748\|Ga0318492_10105520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1388	Open in IMG/M
3300031763\|Ga0318537_10309473	Not Available	584	Open in IMG/M
3300031768\|Ga0318509_10306472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300031769\|Ga0318526_10050639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1583	Open in IMG/M
3300031770\|Ga0318521_10191585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1177	Open in IMG/M
3300031770\|Ga0318521_10261575	Not Available	1012	Open in IMG/M
3300031770\|Ga0318521_10275579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	986	Open in IMG/M
3300031771\|Ga0318546_10104760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1860	Open in IMG/M
3300031778\|Ga0318498_10160657	Not Available	1022	Open in IMG/M
3300031781\|Ga0318547_10374856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	871	Open in IMG/M
3300031793\|Ga0318548_10351563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	723	Open in IMG/M
3300031796\|Ga0318576_10361084	Not Available	686	Open in IMG/M
3300031796\|Ga0318576_10429194	Not Available	624	Open in IMG/M
3300031797\|Ga0318550_10175545	Not Available	1034	Open in IMG/M
3300031798\|Ga0318523_10248860	Not Available	888	Open in IMG/M
3300031819\|Ga0318568_10089573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1831	Open in IMG/M
3300031819\|Ga0318568_10677055	Not Available	641	Open in IMG/M
3300031821\|Ga0318567_10026175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2873	Open in IMG/M
3300031821\|Ga0318567_10333849	Not Available	856	Open in IMG/M
3300031821\|Ga0318567_10532342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300031821\|Ga0318567_10899706	Not Available	501	Open in IMG/M
3300031833\|Ga0310917_10424433	Not Available	904	Open in IMG/M
3300031846\|Ga0318512_10248406	Not Available	878	Open in IMG/M
3300031859\|Ga0318527_10017396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2504	Open in IMG/M
3300031859\|Ga0318527_10192289	Not Available	863	Open in IMG/M
3300031859\|Ga0318527_10370645	Not Available	610	Open in IMG/M
3300031879\|Ga0306919_10073989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2329	Open in IMG/M
3300031879\|Ga0306919_10148284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1708	Open in IMG/M
3300031879\|Ga0306919_10206179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1463	Open in IMG/M
3300031879\|Ga0306919_10393503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1062	Open in IMG/M
3300031880\|Ga0318544_10172844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	831	Open in IMG/M
3300031890\|Ga0306925_11791832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300031893\|Ga0318536_10564743	Not Available	570	Open in IMG/M
3300031896\|Ga0318551_10378716	Not Available	803	Open in IMG/M
3300031897\|Ga0318520_10455858	Not Available	786	Open in IMG/M
3300031910\|Ga0306923_10117269	All Organisms → cellular organisms → Bacteria	3016	Open in IMG/M
3300031910\|Ga0306923_10234952	Not Available	2097	Open in IMG/M
3300031910\|Ga0306923_10254285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2010	Open in IMG/M
3300031912\|Ga0306921_10123659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3016	Open in IMG/M
3300031912\|Ga0306921_10348911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1730	Open in IMG/M
3300031941\|Ga0310912_10406892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1059	Open in IMG/M
3300031941\|Ga0310912_11096074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300031942\|Ga0310916_10295706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1370	Open in IMG/M
3300031942\|Ga0310916_10390739	Not Available	1183	Open in IMG/M
3300031945\|Ga0310913_10236335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1282	Open in IMG/M
3300031945\|Ga0310913_10308136	Not Available	1117	Open in IMG/M
3300031945\|Ga0310913_10517874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	847	Open in IMG/M
3300031946\|Ga0310910_10022876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4141	Open in IMG/M
3300031947\|Ga0310909_10840743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300031954\|Ga0306926_11023975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	981	Open in IMG/M
3300031954\|Ga0306926_11791143	Not Available	697	Open in IMG/M
3300031959\|Ga0318530_10401091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300032001\|Ga0306922_10518848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1269	Open in IMG/M
3300032001\|Ga0306922_10676552	Not Available	1088	Open in IMG/M
3300032025\|Ga0318507_10166314	Not Available	947	Open in IMG/M
3300032035\|Ga0310911_10112817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1502	Open in IMG/M
3300032035\|Ga0310911_10411632	Not Available	782	Open in IMG/M
3300032042\|Ga0318545_10042210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1525	Open in IMG/M
3300032042\|Ga0318545_10216443	Not Available	686	Open in IMG/M
3300032043\|Ga0318556_10082240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1609	Open in IMG/M
3300032044\|Ga0318558_10418839	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300032054\|Ga0318570_10030774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2126	Open in IMG/M
3300032059\|Ga0318533_10697423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	745	Open in IMG/M
3300032059\|Ga0318533_11328713	Not Available	525	Open in IMG/M
3300032060\|Ga0318505_10321886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	730	Open in IMG/M
3300032076\|Ga0306924_10992680	Not Available	922	Open in IMG/M
3300032076\|Ga0306924_11330290	Not Available	770	Open in IMG/M
3300032076\|Ga0306924_11755128	Not Available	648	Open in IMG/M
3300032090\|Ga0318518_10043961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2100	Open in IMG/M
3300032091\|Ga0318577_10022196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2652	Open in IMG/M
3300032205\|Ga0307472_102354956	Not Available	540	Open in IMG/M
3300032261\|Ga0306920_100158929	All Organisms → cellular organisms → Bacteria	3369	Open in IMG/M
3300033290\|Ga0318519_10280553	Not Available	971	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.94%
Host-Associated	Host-Associated	1.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.94%
Plants	Host-Associated → Plants	1.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.06%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.45%
Loam	Environmental → Terrestrial → Soil → Loam	16.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.06%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	67.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.06%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.06%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.53%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.53%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25616J43925_100912894	3300002917	Grasslands Soil	MLDRRAVELVLISLLAAFCSGLAWALDHELFAVAFAAAAVTGAFGAVAALVGTGGS*
Ga0066398_100817461	3300004268	Tropical Forest Soil	KMLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGIGGS*
Ga0066395_106511792	3300004633	Tropical Forest Soil	MLDRWTVELVLILLLAAFCGGLAWALDYELFSVTFAVAAVTGAFGAVAALVGTSGSSPN*
Ga0066388_1008594813	3300005332	Tropical Forest Soil	MTGRRADNKMLDRRVMELVLISLLAAFCGGLAWALDDELFAVAFAAAALTGAFGAVATLVDSGGSPPH*
Ga0066388_1022738923	3300005332	Tropical Forest Soil	VKRREKEIGVDSQMLDRRAVELVLLSLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVAVLVNNGGS*
Ga0066388_1027826841	3300005332	Tropical Forest Soil	MELVLISLLAAFCGGLAWALDHELFAVAFAAAAVMGAFGVVATLVGTGGS*
Ga0066388_1032415441	3300005332	Tropical Forest Soil	MLDRRAVELVLLSLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVAVLVNNGGS*
Ga0066388_1036045222	3300005332	Tropical Forest Soil	MDRRVVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGTGGS*
Ga0066388_1044051492	3300005332	Tropical Forest Soil	MLDRRAVELVLISVLAAFCGGLAWALDDELFAVAFAAAAVTGAFGVVATLVGSAGS*
Ga0066388_1059107542	3300005332	Tropical Forest Soil	MLDRWTVELVLISLLAAFCGGLAWALDHELFAVVFAAAAVTGAFGAVAALVGTGGS*
Ga0008090_101554251	3300005363	Tropical Rainforest Soil	VELGLISLLAAFCGGLAWALDDELFAVVFAAAALTGAFGAVAALVGTSGSPPN*
Ga0070707_1004518212	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLDRRAVELVLISLLAAFCSGLAWALDHELFAVAFAAAAVTGASGAVAVLVNNGGS*
Ga0066691_108012562	3300005586	Soil	VELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVAVLVNNGGS*
Ga0066905_1008220853	3300005713	Tropical Forest Soil	MTGRRADNKMLDRRAVELVLISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN*
Ga0066905_1012947361	3300005713	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGVVATLMGTGGSPPN*
Ga0066905_1015518141	3300005713	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWALDDELFAVAFAAAAVTGAFGVVATLMGTGGSPPN*
Ga0066903_1016672394	3300005764	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWAVDDELFAVAFAAPAVTGAFGVVVGAPPN*
Ga0066903_1017501252	3300005764	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWAFDHELFAVAFAAAAVTGAFGVVATLMGTGGS*
Ga0066903_1021750282	3300005764	Tropical Forest Soil	LDDNEMLDRWTVELVLISLLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVGTSGSSPN*
Ga0066903_1023886723	3300005764	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGTVATLVGTGGSPPN*
Ga0066903_1025458452	3300005764	Tropical Forest Soil	MLERWTVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGVVAALVGTSGSSPN*
Ga0066903_1034193692	3300005764	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGVVATLVGSGGSPPN*
Ga0066903_1036253881	3300005764	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVVFAAAAVTGAFGAVAALVGTGGS*
Ga0066903_1040201682	3300005764	Tropical Forest Soil	MVELVLISVLAAFCGGLAWALDHELFAVVFAAAAVTGAFGAVAALVGIGGS*
Ga0066903_1043428551	3300005764	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWALDDELFAVVFAAAAVTGAFGAVAALVSTGGS*
Ga0066903_1059513312	3300005764	Tropical Forest Soil	PDVRMTGRRADNKMLDRRVMELVLISLLAAFCGGLAWALDHELFAVAFAAEALTGAFGAVATLVDSGGS*
Ga0066903_1073938042	3300005764	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVMGAFGVVAALVSTGGASPN*
Ga0066903_1076054261	3300005764	Tropical Forest Soil	MVDRRVVELVLISLLAAFCGGLAWALDDELFAVAFAAAAVTGAFGVVAILMGTGGSPPN*
Ga0066903_1085017511	3300005764	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVAALMGTGGSPPN*
Ga0066903_1085271832	3300005764	Tropical Forest Soil	MLDRRAVELVLISLLADFCGKLAWALDHELFAVAFAAAAVTGAFGVVATLMGTGGSCRAPRR*
Ga0066903_1091499101	3300005764	Tropical Forest Soil	MEKEIGVDSQMLDRRAVELVLLSLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVAVLVNNGGS*
Ga0070717_100328106	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VELVLISLLAAFCSGLAWALDHELFAVAFAAAAVTGAFGAVAALVGTGGS*
Ga0070717_114693772	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VELVLLSLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVAVLVNNGGS*
Ga0075434_1016763592	3300006871	Populus Rhizosphere	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGTGGS*
Ga0066710_1014004812	3300009012	Grasslands Soil	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVVALVGTGS
Ga0075423_116182332	3300009162	Populus Rhizosphere	MLDRRAVELVLLSLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGTGGS*
Ga0126374_104518171	3300009792	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWALDDELFAVAFAAAALTGAFGAVATLVDSGGSPPN*
Ga0126374_107403181	3300009792	Tropical Forest Soil	MLDRRAMELVLISLLAAFCGGLAWALDHELFAVAFAAAAVMGAFGVVATLVGTGGS*
Ga0126374_115202561	3300009792	Tropical Forest Soil	MLDRRAVELVLISLLAAFCSGLAWARDHELFAVAFAAAAVMGAFGAVAPLVGTGGS*
Ga0126380_104135413	3300010043	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN*
Ga0126384_122436362	3300010046	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGT
Ga0126382_100564823	3300010047	Tropical Forest Soil	MLDRRAVELILISLLAAFCGGLAWALDHELFAVAFTVAAVTGAFGAVAALVGPDGS*
Ga0126382_102675641	3300010047	Tropical Forest Soil	GADSQMLDRRAVELALISLLAAFCSGLAWALDHELFAVAFAAAAVTGAFGAVVALVGTGS
Ga0126382_117050822	3300010047	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGVVATLMGTDGL*
Ga0126373_122361592	3300010048	Tropical Forest Soil	LVRITKMLDRRAVELVLISLLADFCGKLAWALDHELFAVAFAAAAVTGAFGVVATLMGTGGS*
Ga0126376_110706721	3300010359	Tropical Forest Soil	MLGRRAVELVLISVLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVSTGGS*
Ga0126372_112917062	3300010360	Tropical Forest Soil	LISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGVVATLMGTGGS*
Ga0126378_103107723	3300010361	Tropical Forest Soil	MMDRRVVELGLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVSTGGS*
Ga0126378_111744633	3300010361	Tropical Forest Soil	MLGRRAVELVLISVLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGTGGS*
Ga0126378_114730711	3300010361	Tropical Forest Soil	MLDRQAVELVLISLLAAFCGGLAWALDDDLFAVTFVAAAVTGAFGVVATLMGTGGSPPN*
Ga0126379_110159302	3300010366	Tropical Forest Soil	MTGRRADNKMLDRRVMELVLISLLAAFCGGLAWALDDELFAVAFAAAALTGAFGAVATLVDSGGSPSH*
Ga0126383_113131282	3300010398	Tropical Forest Soil	VKREGEGDWVDSQMLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVVALVKNGGS*
Ga0126383_114971731	3300010398	Tropical Forest Soil	MLDRRVMELVLISLLAAFCGGLAWALDHELFAVVFAAAAVTGAFGAVAALVGTGGS*
Ga0137364_106287201	3300012198	Vadose Zone Soil	VELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGTGGS*
Ga0137377_100591296	3300012211	Vadose Zone Soil	MLDRRAVELVLISLLAAFCSGLAWALDHELFAVAFAAAAVTGAFGAVAALVGTGG
Ga0137384_113865031	3300012357	Vadose Zone Soil	VELVLLSLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVVALVGPGS*
Ga0137361_104174042	3300012362	Vadose Zone Soil	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVVALVGTGS*
Ga0126375_117240391	3300012948	Tropical Forest Soil	MLDRRVMELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVVALVKNGGS*
Ga0126369_135220352	3300012971	Tropical Forest Soil	MLDRRTVELVLISLAAAFCGGLAWALDHELFAVVFAAAAVTGAFGAVAA
Ga0164305_105316143	3300012989	Soil	MLDRRAVELVLLSLLAAFCGGLAWALDHEFFAVAFAAAAVTGASGAVAVLVNNGGS*
Ga0182036_113502971	3300016270	Soil	VELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVAVLVNNGGS
Ga0182036_117312032	3300016270	Soil	MLDRRAVELVLISLLAAFCSGLAWALDDELFAVTFAAAAVTGAFGAVTALVNTGGS
Ga0182041_106855504	3300016294	Soil	RRAVELVLISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0182041_109727252	3300016294	Soil	VELVLLSVLAAFCGGLAWALDHELLAVAFAAAAVTGASGAVAVLV
Ga0182041_115623561	3300016294	Soil	VELVLISLLAAFCSGLAWALDHELFAVAFAAAAVTGAFGAVAALV
Ga0182035_106509991	3300016341	Soil	VELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVAVL
Ga0182035_119354132	3300016341	Soil	MLDRRAVELVLISLLAAFCGGLARALDHELFAVVFAAAAVTGAFGAVAA
Ga0182032_102733813	3300016357	Soil	KKEIGSKKMLDRRTVELVLISLAAAFCGGLAWALQFTGAFGAVAALVGIGRS
Ga0182032_120329401	3300016357	Soil	LVLISVLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVSTGGS
Ga0182034_101928581	3300016371	Soil	QMLDRRAVGLVLISLLAAFCGGLAWGLDHELFAVVFAAAAVTGAFGAVAALVGTSGS
Ga0182034_102647301	3300016371	Soil	TVELVLISLLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVGTSGSSPN
Ga0182040_114118611	3300016387	Soil	VELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGI
Ga0182040_116920381	3300016387	Soil	MLNRRAVELVLISLLAAFCGGLAWTLDHELFAVAFAAAALTGALGAVAALVP
Ga0182039_102694362	3300016422	Soil	MMDRRVVELGLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVSTGGS
Ga0182038_102713871	3300016445	Soil	ELVLISLLAAFCGGLAWALDHELFAIAFAAAAVTGAFGVVATLMGTGGS
Ga0182038_116189281	3300016445	Soil	VRITKMLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGVVATLMG
Ga0126371_130360282	3300021560	Tropical Forest Soil	MLDRRAVELVLISLLAAFGGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0207646_103774702	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MLDRRAVELVLLSLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVAVLVNNGGS
Ga0318516_101270741	3300031543	Soil	TKMLDRRAVELVLISLLAAFCAGLAWALDHGLFGVVFAAAAVTGAFGAVAALVGTGGS
Ga0318516_101550261	3300031543	Soil	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGIGGS
Ga0318516_105223841	3300031543	Soil	KKEIGSKKMLDRRTVELVLISLAAAFCGGLAWALDHELFAVVFAAAAVTGAFGAVAALVGTGGSPPN
Ga0318534_105857552	3300031544	Soil	VELVLLSVLAAFCGGLAWALDHELLAVAFAAAAVTGASGAVAVLVNNGGS
Ga0318541_100570741	3300031545	Soil	MLDRRAVELVLISLLAAFCAGLAWALDHGLFGVVFAAAAVTGAFGAVAALVGTGGS
Ga0318541_101315382	3300031545	Soil	LGDNEMLDRWTVELVLISVLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVSTGG
Ga0318541_101461554	3300031545	Soil	MLNRRAVELVLISLLAAFCGGLAWTLDHELFAVAFAAAALTGAFGAVAALVGTGGSSPN
Ga0318538_100177713	3300031546	Soil	MLDRRTVELVLISLAAAFCGGLAWALDHELFAVVFAAAAVTGAFGAVAALVGTGGSPPN
Ga0318538_100972952	3300031546	Soil	MLDRWTVELVLISVLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVSTGGS
Ga0318538_101717181	3300031546	Soil	IGSKKMLDRRTVELVLISLAAAFCGGLAWALQFTGAFGAVAALVGIGRS
Ga0318538_104448391	3300031546	Soil	MLNRRAVELVLISLLAAFCGGLAWTLDHELFAVAFAAAALTGALGAVAALVGTGGSSPN
Ga0310915_100641212	3300031573	Soil	MLDRRAVELILISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0310915_101197354	3300031573	Soil	MLDRWTVELVLILLLAAFCGGLAWALDYELFSVTFAVAAVTGAFGAVAALVGTSGSSPN
Ga0310915_101385532	3300031573	Soil	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGTGGS
Ga0310915_101469144	3300031573	Soil	MLDRWTVELVLISLLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVGTSGSSPN
Ga0310915_105562193	3300031573	Soil	LISLLAAFCGGLAWALDYELFAVAFAAAAVTGAFGAVTALVSTGGSPPN
Ga0310915_107471411	3300031573	Soil	LVLISVLAAFCGGRAWALDHELFAVAFAAAAVTGAFGVVATLVGTGGS
Ga0318555_102442532	3300031640	Soil	VELVLISLLAAFCGGLAWTLDHELFAVAFAAAALTGAFGAVAALVGTGGSSPN
Ga0318542_100552114	3300031668	Soil	VLISLLAAFCAGLAWALDHGLFGVVFAAAAVTGAFGAVAALVGTGGS
Ga0318561_100802031	3300031679	Soil	LGPITKMLDRRAVELVLISLLAAFCAGLAWALDHGLFGVVFAAAAVTGAFGAVAALVGTGGS
Ga0318574_102223492	3300031680	Soil	MMDRRVVELGLISLLAAFCGGLAWALGHELFAVAFAAAAVTGAFGAVAALVSTGG
Ga0318572_104460293	3300031681	Soil	VKEIGADNKMLDRRAGELVLISLLAAFCGGLAWALDHELFAIAFAAAAVTGAFGVVATLMGTGGS
Ga0318496_103972962	3300031713	Soil	RAAPLCLWPVHRPDVRMTGRRADNKMLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVTALVNTGGS
Ga0306917_110613721	3300031719	Soil	MLDRRAVELVLLSVLAAFCGGLAWALDHELLAVAFAAAAVTGASGAVAVLVNNGGS
Ga0306917_112540263	3300031719	Soil	RKKEIEANNKMLDRRTVELVLISLLAAFCGGLAWALDYELFAVAFAAAAVTGAFGAVTALVSTGGSPPN
Ga0306917_113092181	3300031719	Soil	KEIGSKKMLDRRTVELVLISLAAAFCGGLAWALDHELFAVVFAAAAVTGAFGAVAALVGTGGSPPN
Ga0318500_103052433	3300031724	Soil	MTGRRADNKMLDRRAVELILISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0318500_103552902	3300031724	Soil	MTGRRADNKLLDRRAVELVLISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVAALVGTSGSPPN
Ga0318501_102447862	3300031736	Soil	TKMLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGIGGS
Ga0318501_102798581	3300031736	Soil	HVKEIGADNKMLDRRAGELVLISLLAAFCGGLAWALDHELFAIAFAAAAVTGAFGVVATLMGTGGS
Ga0306918_100095974	3300031744	Soil	MLDRRAVELVLISLLAAFCGGLAWALDDELLAVTFAAAAVTGAFGVVATLMGTGGHRQTETALLVIAR
Ga0306918_100393383	3300031744	Soil	VELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGIGGS
Ga0306918_100907992	3300031744	Soil	MLDRRAGELVLISLLAAFCGGLAWALDHELFAIAFAAAAVTGAFGVVATLMGTGGS
Ga0306918_102318132	3300031744	Soil	MTGRRADNKLLDRRAVELVLISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGHRQTETALLVIAR
Ga0306918_104313583	3300031744	Soil	MLDRRAVELVLISLLAAFCGGLARALDHELFAVVFAAAAVTGAFGAVAALMGTGGSPPK
Ga0306918_109658071	3300031744	Soil	MLDRRTVELVLISLLAAFCGGLAWALDYELFAVAFAAAAVTGAFGAVTALVSTGGSPPN
Ga0318502_100819984	3300031747	Soil	CLWPVHRPDVRMTGRRADNKMLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVTALVNTGGS
Ga0318492_101055204	3300031748	Soil	RRRLGPITKMLDRRAVELVLISLLAAFCAGLAWALDHGLFGVVFAAAAVTGAFGAVAALVGTGGS
Ga0318537_103094732	3300031763	Soil	ISLLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVGTSGSSPN
Ga0318509_103064722	3300031768	Soil	MLDRRAAELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVTALVNTGGS
Ga0318526_100506393	3300031769	Soil	MLDRRTVELVLISLAAAFCGGLAWALQFTGAFGAVAALVGIGRS
Ga0318521_101915851	3300031770	Soil	MLDRRAVELVLISLLAAFCGGLAWGLDHELFAVAFAAAAVTGASGAVAVLVNNGGS
Ga0318521_102615751	3300031770	Soil	TVELVLISVLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVSTGGS
Ga0318521_102755792	3300031770	Soil	VELVLISLAAAFCGGLAWALDHELFAVVFAAAAVTGAFGAVAALVGTGGSPPN
Ga0318546_101047602	3300031771	Soil	MTGRRADNKMLDRRAVELVLISLLAAFCGGLAWALDDELIAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0318498_101606572	3300031778	Soil	MMDRRVVELGLISLLAAFCGGLAWALGHELFAVAFAAAAVTGAFGAVA
Ga0318547_103748562	3300031781	Soil	VELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVAALVGTGGS
Ga0318548_103515631	3300031793	Soil	VELVLLSLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVAVLVNNGGS
Ga0318576_103610841	3300031796	Soil	HVKEIRADNKMLDRRAVELVLISLLAAFCGGLAWALDHELFAIAFAAAAVTGAFGVVATLMGTGGS
Ga0318576_104291941	3300031796	Soil	VELVLISLLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVGTSGSSPN
Ga0318550_101755451	3300031797	Soil	PITKMLDRRAAELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVTALVNTGGS
Ga0318523_102488604	3300031798	Soil	ISLLAAFCSGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0318568_100895734	3300031819	Soil	KMLDRRAVELILISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0318568_106770553	3300031819	Soil	GRKKEIGSKKMLDRRTVELVLISLAAAFCGGLAWALDHELFAVVFAAAAVTGAFGAVAALVGTGGSPPN
Ga0318567_100261755	3300031821	Soil	MDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAYGVVATLMGTAFS
Ga0318567_103338493	3300031821	Soil	AVELILISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0318567_105323421	3300031821	Soil	LVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVTALVNTGGS
Ga0318567_108997062	3300031821	Soil	MTGRRADNKLLDRRAVELVLISLLAAFCGGLAWALDDELFAVAFAAAAVAGAFGVVAILMGSGGSPPN
Ga0310917_104244334	3300031833	Soil	DRRAVELVLISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0318512_102484063	3300031846	Soil	LDRRAVELVLISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0318527_100173961	3300031859	Soil	MLDRRTVELVLISLAAAFCGGLAWALQFTGAFGAVAALVGIG
Ga0318527_101922892	3300031859	Soil	MMDRRVVELGLISLLAAFCGGLAWALGHELFAVAFAAAAVTGAFGAVAAL
Ga0318527_103706451	3300031859	Soil	EIGSKKMLDRRTVELVLISLAAAFCGGLAWALQFTGAFGAVAALVGIGRS
Ga0306919_100739892	3300031879	Soil	MTGRRADNKLLDRRAVELVLISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0306919_101482841	3300031879	Soil	NKMLDRRAVELILISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPP
Ga0306919_102061792	3300031879	Soil	MLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVTALVNTGGS
Ga0306919_103935032	3300031879	Soil	MLDRRAVELVLISLLAAFCGGLAWALDDELLAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0318544_101728442	3300031880	Soil	MLDRRAAELVLISLLAAFCGGLAWALDHELFAVAFAAAEVTGAFGAVTALVNTGGS
Ga0306925_117918322	3300031890	Soil	MLDRRAVELVLISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0318536_105647431	3300031893	Soil	NEMLDRWTVELVLISVLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVSTGGS
Ga0318551_103787162	3300031896	Soil	MDPWVPELFLISLLAAICGGLAWIHDHELFAAAFAAAAVTGAFGAVTALVGTG
Ga0318520_104558581	3300031897	Soil	ELVLISLLAAFCSGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0306923_101172696	3300031910	Soil	AVELVLISLLAAFCGGLAWALDDELLAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0306923_102349522	3300031910	Soil	VRITKMLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGVVATLMGTGG
Ga0306923_102542852	3300031910	Soil	MLDRRAVELVSISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVVALVGTGS
Ga0306921_101236595	3300031912	Soil	LGPITKMLDRRAVELVLISVLAAFCGGRAWALDHELFAVAFAAAAVTGAFGVVATLVGTGGS
Ga0306921_103489114	3300031912	Soil	VKRRLGDNEMLDRWTVELVLISVLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVSTGGS
Ga0310912_104068923	3300031941	Soil	MTGRRADNKMLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVTALVNTGGS
Ga0310912_110960742	3300031941	Soil	MLDRRAAELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVTALVNTGG
Ga0310916_102957061	3300031942	Soil	ESVLISLLAACGGLAWAFDHELFAVAFAAAAVTGAFGAVATLVGTGGS
Ga0310916_103907393	3300031942	Soil	SGRKKEIGSKKMLDRRTVELVLISLAAAFCGGLAWALQFTGAFGAVAALVGIGRS
Ga0310913_102363351	3300031945	Soil	GDNKMLDRWTVESVLISPLAACGGLAWAFDHELFAVAFAAAAVTGAFGAVATLVGTGGS
Ga0310913_103081361	3300031945	Soil	ADNKLLDRRAVELVLISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0310913_105178741	3300031945	Soil	SGREKEIWADNKMLDRRAVELVLISLLAAFCGGLARALDHELFAVVFAAAAVTGAFGAVAALMGTGGSPPK
Ga0310910_100228767	3300031946	Soil	VELVLISLLAAFCAGLAWALDHGLFGVVFAAAAVTGAFGAVAALVGTGGS
Ga0310909_108407432	3300031947	Soil	VELVLLSLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVAVLVNNG
Ga0306926_110239751	3300031954	Soil	RRAVELVLISLLAAFCGGLARALDHELFAVVFAAAAVTGAFGAVAALMGTGGSPPK
Ga0306926_117911431	3300031954	Soil	RAVELVSISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVVALVGTGS
Ga0318530_104010912	3300031959	Soil	VELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVAVLVNNG
Ga0306922_105188482	3300032001	Soil	MLDRRAVELVLISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVATLMGTGGHRQTETALLVIAR
Ga0306922_106765521	3300032001	Soil	GREKEIWADNKMLDRRAVELVLISLLAAFCGGLAWALDDELLAVTFAAAAVTGAFGVVATLMGTGGSPPN
Ga0318507_101663141	3300032025	Soil	SKNSACAAVKRRLGDNEMLDRWTVELVLISVLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVSTGGS
Ga0310911_101128175	3300032035	Soil	RPDVRMTGRRADNKMLDRRAVELVLISLLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVGTSGSSPN
Ga0310911_104116323	3300032035	Soil	LDRRAGELVLISLLAAFCGGLAWALDHELFAIAFAAAAVTGAFGVVATLMGTGGS
Ga0318545_100422101	3300032042	Soil	MLDRRTVELVLISLPAAFCGGLAWALDHELFAVVFAAAAVTGAFGAVAALVGTGGSPPN
Ga0318545_102164432	3300032042	Soil	MLNRRAVELVLISLLAAFCGGLAWTLDHELSAVAFAAAALTGAFGAVAALVGTGGSSPN
Ga0318556_100822403	3300032043	Soil	MMDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAYGVVATLMGTAFSLSLAKSQPEK
Ga0318558_104188392	3300032044	Soil	MTGRRADNKLLDRREVELVLISLLAAFCGGLAWALDDELFAVTFAAAAVTGAFGVVAALVGTSGSSPN
Ga0318570_100307745	3300032054	Soil	MMDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAYGVVATLM
Ga0318533_106974232	3300032059	Soil	MLDRRTVELVLISLAAAFCGGLARALDHELFAVVFAAAAVTGAFGAVAALVGTGGS
Ga0318533_113287132	3300032059	Soil	MLDQRTVELVLISLAAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVTALVGTSGS
Ga0318505_103218861	3300032060	Soil	VELVLLSVLAAFCGGLAWALDHELLAVAFAAAAVTGASGAVAVL
Ga0306924_109926801	3300032076	Soil	VRITKMLDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFDVVATLMGTGG
Ga0306924_113302901	3300032076	Soil	RTSRRIRLAWRCKEDWGDNKMLDRWTVESVLISLLAACGGLAWAFDHELFAVAFAAAAVTGAFGAVATLVGTGGS
Ga0306924_117551282	3300032076	Soil	EFGARTKMLDRRAVELVSISLLAAFCGGLAWALDHELFAVAFAAAAVTGAFGAVVALVGTGS
Ga0318518_100439613	3300032090	Soil	MLDRRAVELVLISVLAAFCGGRAWALDHELFAVAFAAAAVTGAFGVVATLVGTGGS
Ga0318577_100221965	3300032091	Soil	MDRRAVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGAYGVVATLMG
Ga0307472_1023549561	3300032205	Hardwood Forest Soil	RKKEIGAHNKMLDRRGVELVLISLLAAFCGGLAWALDHELFAVAFAAAAVTGASGAVTVLVNNGGS
Ga0306920_1001589299	3300032261	Soil	VELVLISLLAAFCGGLAWGLDHELFAVVFAAAAVTGAFGAVAALVGTSGS
Ga0318519_102805531	3300033290	Soil	VLISVLAAFCGGLAWALDHELFAVVFAAAAVTGAFGTVAALVSTGGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F029352

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences