Metagenome / Metatranscriptome Family F029160

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F029160
Family Type	Metagenome / Metatranscriptome
Number of Sequences	189
Average Sequence Length	43 residues
Representative Sequence	MTPTERPISHKVLLVDDDDAVREMMTVTLEHKGFDVVAATNV
Number of Associated Samples	140
Number of Associated Scaffolds	189

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.00 %
% of genes near scaffold ends (potentially truncated)	71.96 %
% of genes from short scaffolds (< 2000 bps)	67.20 %
Associated GOLD sequencing projects	128
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.254 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.931 % of family members)
Environment Ontology (ENVO)	Unclassified (30.159 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.323 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 14.29% Coil/Unstructured: 65.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 189 Family Scaffolds
PF00072	Response_reg	24.34
PF13545	HTH_Crp_2	5.82
PF12779	WXXGXW	3.17
PF14361	RsbRD_N	2.65
PF00027	cNMP_binding	1.06
PF02954	HTH_8	1.06
PF00563	EAL	1.06
PF00990	GGDEF	0.53
PF13185	GAF_2	0.53
PF02897	Peptidase_S9_N	0.53
PF13469	Sulfotransfer_3	0.53
PF00069	Pkinase	0.53
PF02518	HATPase_c	0.53
PF13487	HD_5	0.53
PF01988	VIT1	0.53
PF04366	Ysc84	0.53
PF00882	Zn_dep_PLPC	0.53
PF01068	DNA_ligase_A_M	0.53
PF07963	N_methyl	0.53
PF08447	PAS_3	0.53
PF04185	Phosphoesterase	0.53
PF00326	Peptidase_S9	0.53
PF06745	ATPase	0.53
PF00239	Resolvase	0.53
PF13692	Glyco_trans_1_4	0.53
PF09699	Paired_CXXCH_1	0.53
PF11941	DUF3459	0.53
PF01566	Nramp	0.53
PF05697	Trigger_N	0.53
PF13302	Acetyltransf_3	0.53
PF03544	TonB_C	0.53
PF13620	CarboxypepD_reg	0.53
PF13435	Cytochrome_C554	0.53
PF02621	VitK2_biosynth	0.53
PF00383	dCMP_cyt_deam_1	0.53
PF13276	HTH_21	0.53
PF00989	PAS	0.53

COG ID	Name	Functional Category	% Frequency in 189 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.12
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	1.06
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	1.06
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	1.06
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	1.06
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.53
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.53
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.53
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.53
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.53
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.53
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.53
COG1770	Protease II	Amino acid transport and metabolism [E]	0.53
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.53
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.53
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	0.53
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.53
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.53
COG0544	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	Posttranslational modification, protein turnover, chaperones [O]	0.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.25 %
Unclassified	root	N/A	31.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.25 %
Unclassified	root	N/A	31.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.25 %
Unclassified	root	N/A	31.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	46.56 %
Unclassified	root	N/A	31.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.06 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.94 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.53 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.53 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.94 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.53 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.53 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.94 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.76 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.53 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.53 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.53 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.94 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	2.65 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.06 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.53 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.53 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.53 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.53 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.94 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2.65 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.06 %
unclassified Methylocystis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis	0.53 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.53 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.53 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.53 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.94 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2.65 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.06 %
Granulicella sp. GAS466	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. GAS466	0.53 %
Methylocystis sp. SC2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. SC2	0.53 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.53 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.53 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.53 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12729428	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300001175\|JGI12649J13570_1014041	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300001593\|JGI12635J15846_10747918	Not Available	562	Open in IMG/M
3300002245\|JGIcombinedJ26739_100508867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1081	Open in IMG/M
3300002245\|JGIcombinedJ26739_100613208	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300002245\|JGIcombinedJ26739_100663410	Not Available	921	Open in IMG/M
3300004156\|Ga0062589_100551858	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300005167\|Ga0066672_10180782	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300005458\|Ga0070681_10273343	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300005552\|Ga0066701_10024478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3054	Open in IMG/M
3300005552\|Ga0066701_10127062	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300005591\|Ga0070761_10747447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300005602\|Ga0070762_10031346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2844	Open in IMG/M
3300005602\|Ga0070762_10226014	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300005844\|Ga0068862_102740348	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300006052\|Ga0075029_100557227	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300006162\|Ga0075030_100570961	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300006893\|Ga0073928_10266350	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300006914\|Ga0075436_101308840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. SC2	548	Open in IMG/M
3300007982\|Ga0102924_1143090	All Organisms → cellular organisms → Bacteria → Acidobacteria	1117	Open in IMG/M
3300007982\|Ga0102924_1261539	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300009090\|Ga0099827_11387084	Not Available	612	Open in IMG/M
3300009520\|Ga0116214_1419207	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300009624\|Ga0116105_1130612	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300009635\|Ga0116117_1077678	Not Available	823	Open in IMG/M
3300009645\|Ga0116106_1065140	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300009759\|Ga0116101_1090877	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300009760\|Ga0116131_1070991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300009764\|Ga0116134_1051628	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300009824\|Ga0116219_10024767	All Organisms → cellular organisms → Bacteria	3659	Open in IMG/M
3300009824\|Ga0116219_10305809	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300011120\|Ga0150983_10156933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300011120\|Ga0150983_12276256	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300011120\|Ga0150983_13311668	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300011411\|Ga0153933_1048318	All Organisms → cellular organisms → Bacteria → Acidobacteria	934	Open in IMG/M
3300012203\|Ga0137399_10406273	Not Available	1136	Open in IMG/M
3300012211\|Ga0137377_11877973	Not Available	517	Open in IMG/M
3300013102\|Ga0157371_11111251	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300013308\|Ga0157375_13701239	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300014160\|Ga0181517_10382975	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300014200\|Ga0181526_10040075	All Organisms → cellular organisms → Bacteria → Acidobacteria	3003	Open in IMG/M
3300014489\|Ga0182018_10006065	All Organisms → cellular organisms → Bacteria	9526	Open in IMG/M
3300014491\|Ga0182014_10341527	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300014501\|Ga0182024_10089749	All Organisms → cellular organisms → Bacteria	4529	Open in IMG/M
3300014501\|Ga0182024_11104630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	936	Open in IMG/M
3300014638\|Ga0181536_10397930	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300014745\|Ga0157377_11033740	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300017931\|Ga0187877_1332823	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300017941\|Ga0187850_10119273	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300017946\|Ga0187879_10035285	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3003	Open in IMG/M
3300017946\|Ga0187879_10063427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2154	Open in IMG/M
3300017948\|Ga0187847_10000511	All Organisms → cellular organisms → Bacteria	42629	Open in IMG/M
3300018007\|Ga0187805_10277742	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300018009\|Ga0187884_10300049	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300018021\|Ga0187882_1135261	All Organisms → cellular organisms → Bacteria → Acidobacteria	1014	Open in IMG/M
3300018021\|Ga0187882_1358676	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300018033\|Ga0187867_10636033	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300018037\|Ga0187883_10177834	All Organisms → cellular organisms → Bacteria → Acidobacteria	1092	Open in IMG/M
3300018038\|Ga0187855_10623904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300018038\|Ga0187855_10776065	Not Available	559	Open in IMG/M
3300018040\|Ga0187862_10638057	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300018040\|Ga0187862_10824080	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300018044\|Ga0187890_10361356	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300018047\|Ga0187859_10308874	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300018057\|Ga0187858_10027712	All Organisms → cellular organisms → Bacteria	4314	Open in IMG/M
3300018468\|Ga0066662_12881774	Not Available	511	Open in IMG/M
3300019786\|Ga0182025_1020160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1821	Open in IMG/M
3300020579\|Ga0210407_10008551	All Organisms → cellular organisms → Bacteria	7678	Open in IMG/M
3300020579\|Ga0210407_10039030	All Organisms → cellular organisms → Bacteria → Acidobacteria	3532	Open in IMG/M
3300020579\|Ga0210407_10320102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1212	Open in IMG/M
3300020580\|Ga0210403_10295854	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300020581\|Ga0210399_10499016	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300020582\|Ga0210395_11088172	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300021088\|Ga0210404_10006754	All Organisms → cellular organisms → Bacteria → Acidobacteria	4627	Open in IMG/M
3300021171\|Ga0210405_10116102	All Organisms → cellular organisms → Bacteria → Acidobacteria	2114	Open in IMG/M
3300021180\|Ga0210396_11688161	Not Available	515	Open in IMG/M
3300021181\|Ga0210388_10142188	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2080	Open in IMG/M
3300021181\|Ga0210388_10887388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300021181\|Ga0210388_11817606	Not Available	502	Open in IMG/M
3300021407\|Ga0210383_11167380	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300021407\|Ga0210383_11738288	Not Available	510	Open in IMG/M
3300021433\|Ga0210391_10009622	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7852	Open in IMG/M
3300021433\|Ga0210391_10665902	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300021474\|Ga0210390_10415144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1137	Open in IMG/M
3300021474\|Ga0210390_10561341	All Organisms → cellular organisms → Bacteria → Acidobacteria	959	Open in IMG/M
3300021479\|Ga0210410_10087351	All Organisms → cellular organisms → Bacteria → Acidobacteria	2744	Open in IMG/M
3300021479\|Ga0210410_10539499	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300022557\|Ga0212123_10199740	All Organisms → cellular organisms → Bacteria → Acidobacteria	1484	Open in IMG/M
3300022840\|Ga0224549_1042906	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300023068\|Ga0224554_1089615	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300023259\|Ga0224551_1045882	Not Available	760	Open in IMG/M
3300025404\|Ga0208936_1051657	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300025473\|Ga0208190_1012435	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300025477\|Ga0208192_1103066	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300025912\|Ga0207707_10295282	All Organisms → cellular organisms → Bacteria → Acidobacteria	1402	Open in IMG/M
3300025928\|Ga0207700_11345578	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300026214\|Ga0209838_1027231	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300026294\|Ga0209839_10065629	All Organisms → cellular organisms → Bacteria → Acidobacteria	1284	Open in IMG/M
3300026490\|Ga0257153_1001975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3864	Open in IMG/M
3300027297\|Ga0208241_1010209	All Organisms → cellular organisms → Bacteria → Acidobacteria	1311	Open in IMG/M
3300027497\|Ga0208199_1128296	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300027545\|Ga0209008_1052391	Not Available	929	Open in IMG/M
3300027604\|Ga0208324_1219151	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300027641\|Ga0208827_1209119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	515	Open in IMG/M
3300027652\|Ga0209007_1009959	All Organisms → cellular organisms → Bacteria → Acidobacteria	2517	Open in IMG/M
3300027660\|Ga0209736_1110099	Not Available	745	Open in IMG/M
3300027660\|Ga0209736_1145875	Not Available	630	Open in IMG/M
3300027678\|Ga0209011_1112318	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300027727\|Ga0209328_10208875	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300027853\|Ga0209274_10044995	All Organisms → cellular organisms → Bacteria → Acidobacteria	2083	Open in IMG/M
3300027853\|Ga0209274_10082254	All Organisms → cellular organisms → Bacteria → Acidobacteria	1569	Open in IMG/M
3300027853\|Ga0209274_10389069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300027867\|Ga0209167_10173245	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300027879\|Ga0209169_10130289	All Organisms → cellular organisms → Bacteria → Acidobacteria	1307	Open in IMG/M
3300027884\|Ga0209275_10671687	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300027911\|Ga0209698_11198665	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	559	Open in IMG/M
3300027911\|Ga0209698_11358090	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300028017\|Ga0265356_1017186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300030053\|Ga0302177_10158474	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1270	Open in IMG/M
3300030058\|Ga0302179_10037027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2246	Open in IMG/M
3300030399\|Ga0311353_11505044	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300030494\|Ga0310037_10257643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300030503\|Ga0311370_12129518	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300030760\|Ga0265762_1033001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	989	Open in IMG/M
3300030862\|Ga0265753_1002892	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300031090\|Ga0265760_10065073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1112	Open in IMG/M
3300031231\|Ga0170824_118001463	All Organisms → cellular organisms → Bacteria → Acidobacteria	1378	Open in IMG/M
3300031232\|Ga0302323_102567317	Not Available	582	Open in IMG/M
3300031236\|Ga0302324_102587764	Not Available	617	Open in IMG/M
3300031240\|Ga0265320_10163494	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300031469\|Ga0170819_15018030	Not Available	502	Open in IMG/M
3300031474\|Ga0170818_108062968	Not Available	664	Open in IMG/M
3300031525\|Ga0302326_10618078	All Organisms → cellular organisms → Bacteria → Acidobacteria	1606	Open in IMG/M
3300031708\|Ga0310686_115364529	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300031715\|Ga0307476_10489450	All Organisms → cellular organisms → Bacteria → Acidobacteria	911	Open in IMG/M
3300031716\|Ga0310813_11136021	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300031718\|Ga0307474_10113063	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. GAS466	2035	Open in IMG/M
3300031718\|Ga0307474_10522428	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300031718\|Ga0307474_11143031	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300031753\|Ga0307477_10483831	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300031754\|Ga0307475_10131985	All Organisms → cellular organisms → Bacteria → Acidobacteria	1974	Open in IMG/M
3300031754\|Ga0307475_10728033	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300031754\|Ga0307475_11313247	Not Available	560	Open in IMG/M
3300031817\|Ga0316046_106009	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300031823\|Ga0307478_11074453	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300032160\|Ga0311301_12127509	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300032180\|Ga0307471_103485189	Not Available	557	Open in IMG/M
3300032756\|Ga0315742_11098843	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300033829\|Ga0334854_104618	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300034125\|Ga0370484_0221286	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.71%
Host-Associated	Host-Associated	5.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.31%
Aquatic	Environmental → Aquatic	25.40%
Plants	Host-Associated → Plants	4.76%
Fungi	Host-Associated → Fungi	0.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.43%
Freshwater	Environmental → Aquatic → Freshwater	20.63%
Peat	Environmental → Terrestrial → Peat	6.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.23%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.65%
Sediment	Environmental → Aquatic → Sediment	2.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.53%
Mycelium	Host-Associated → Fungi → Mycelium	0.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.63%
Loam	Environmental → Terrestrial → Soil → Loam	20.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.23%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.12%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.53%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.53%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.05%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.70%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.59%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.53%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	12.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.29%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.70%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.12%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.12%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.06%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.06%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.06%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.53%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.53%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.53%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.53%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.53%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.53%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.53%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.53%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011411	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031817	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_127294282	3300000789	Soil	MSPTEPPVAHKVLLVDDDDAVCAMMNATLERKGFDVVAAASV
JGI12649J13570_10140411	3300001175	Forest Soil	MIPTEHPITHKVLLVDDDDAVRTMMTLTLEHKGFEVVSAPN
JGI12635J15846_107479182	3300001593	Forest Soil	MTPTEQPVAHRVLLVDDDNAVLAMMTATLTHKGFD
JGIcombinedJ26739_1005088672	3300002245	Forest Soil	MPYPPVVHKILLVDDDDSVRAMMSATLEKKGFEVIAAANVTEALKLI
JGIcombinedJ26739_1006132081	3300002245	Forest Soil	MTPTEWPVFHRALLVDDDEAVRSMMNATLERKVFE
JGIcombinedJ26739_1006634102	3300002245	Forest Soil	MTPTGKSVVHRVLLVDDDEAVRAMMNVGVERGEALAMK
Ga0062589_1005518581	3300004156	Soil	MTVPERPAAHRVLLVDDDDAVRSMMNLTLESKGFDVVAAASVTEALRR
Ga0066672_101807823	3300005167	Soil	MAPNEQRFAHRVLLVDDDDAVRAMMNATFERKGFDVVAAASVTEALR
Ga0070681_102733432	3300005458	Corn Rhizosphere	MIPSTLHKVLLVDDDSAVRNMMELTLEYKGFKVVSAANVTE
Ga0066701_100244785	3300005552	Soil	MASNEQRFAHRVLLVDDDAAVRAMVNQGLERQGFEVVAAASV
Ga0066701_101270623	3300005552	Soil	MAPNEQRFAHRVLLVDDDAAVRAMVNQGLERQGFEVVAAASV
Ga0070761_100683562	3300005591	Soil	MTQAQTSVSQRVLLVDDDEAVRSMMTATLEHKGVKVVPAASFSGSTLRG*
Ga0070761_101348613	3300005591	Soil	VTQTKTSVSHRVLLVDDDEAVRSMMTATLEHKGFEVVPAASVTE
Ga0070761_107474472	3300005591	Soil	MVPTEQRSAHKVLLVDDDDAVRNMMTATLLHKGFGVVSAANVTEALKL
Ga0070762_100313461	3300005602	Soil	MTQTQTGVSHRVLLVDDDEGVRDVMRETLQAKGVDVVPAGNVREAMATLQ*
Ga0070762_102260141	3300005602	Soil	MTPTEPLIAHKVLLVDDDDAVRTMMTLTLEHKGFGVV
Ga0070763_107083912	3300005610	Soil	MTQTKTSISHRVLLVDDDEAVRDMMSTTLEHKGFE
Ga0070764_109784272	3300005712	Soil	MAQTETSASHRVLLVDDDEAIRTMMTLTLEQKGFEVVAAAN
Ga0068862_1027403482	3300005844	Switchgrass Rhizosphere	MALAEGSTSHKVLLVDDDAAVRDMMTATLQHKGFKVVSAANVTEAL
Ga0075029_1005572271	3300006052	Watersheds	MTPTEPRVAHRVLLVDDDGAVRAMMKEGLARKGFEV
Ga0075030_1005709612	3300006162	Watersheds	MTTTERSAAHKGLLVDDDDAVRDMMSMTLERKGFDVVAAAS
Ga0070765_1010103832	3300006176	Soil	MTAMAQTGTSASHRVLLVDDDEAIRTMMTLTLEHKGF
Ga0073928_102663502	3300006893	Iron-Sulfur Acid Spring	MTLAERPISHKVLLVDDDDAIREMMTATLAHKGFAVV
Ga0075436_1013088401	3300006914	Populus Rhizosphere	MDPISPSAHHTVLLVDDDTAVRDMMALTLEHKGFKVISAANV
Ga0102924_11430902	3300007982	Iron-Sulfur Acid Spring	MTPAEHSISHKVLLVDDDDAVCEMMTGTLEHTGFGVVAAVNVTGALKRI*
Ga0102924_12615391	3300007982	Iron-Sulfur Acid Spring	MTPPERPIVYRVLLVDDDDAVRDIMTATLEHKGFG
Ga0099827_113870841	3300009090	Vadose Zone Soil	MAPNERRFAHRVLLVDDDAAVRAMVNKGLERQGFEVVAAASVTEAL
Ga0116214_14192071	3300009520	Peatlands Soil	MTPTDPPVAHKVLVVDDDDGVRAMMTATLKHKGFDVVAAASVTE
Ga0116105_11306122	3300009624	Peatland	MTPTERRTAHKVLLVDDDDAVRDMMTLTLEHKGFEVVSAANVT
Ga0116117_10776782	3300009635	Peatland	MTTPEKSVAYKTLLVDDDNAVRQVMTAVLERKGFEVIAVA
Ga0116106_10651402	3300009645	Peatland	MTPTEPPAAHKVLLVDDDDAVRAMMSATLERKGFDVVTA
Ga0116101_10908771	3300009759	Peatland	MCDMTPLENPVTHRVLLVDDDDGVRSMMTQTLEYRGFSVVAASSVGEA
Ga0116131_10709911	3300009760	Peatland	MTQTTRPVALKVLLVDDDDAVRGMMNMTLERKGFDGT*
Ga0116131_11714812	3300009760	Peatland	MTQTKTSVSHRVLLVDDDEAVRAMMTATLTRKGFDVVPAANVTEALK
Ga0116134_10516281	3300009764	Peatland	MVPSERPIVYKVLLVDDDGAVRDMMTATFEHKGFGVVAVA
Ga0116219_100247671	3300009824	Peatlands Soil	MAPTEQPVAYRVLLVDDDDGVRAMMTATLEHKGFDAVAAASVTEA
Ga0116219_103058092	3300009824	Peatlands Soil	MTPTEPPVAHKVLLVDDDDAVRGMMTMTLEHQGLEV
Ga0150983_101569331	3300011120	Forest Soil	QTKTSVSHRVLLVDDDEAVRDVMSATLEGKGFDVVSAASVTTPS*
Ga0150983_122762561	3300011120	Forest Soil	MTPIEPGAAHRVLLVDDDGAVRAMMNEALRRKGFDVVTA
Ga0150983_133116681	3300011120	Forest Soil	MTPAEHSISHKVLLVDDDDAVREMMTVTLERKGFAVVAAANVTE
Ga0153933_10483181	3300011411	Attine Ant Fungus Gardens	MTPTESTVSHIHRVLLVDDDDAVRTMMNATLERKGFEVVPAANVTEALR
Ga0137399_104062731	3300012203	Vadose Zone Soil	MSSTGSPIVHKVLLVDDDDDVRAMMKATLERKGFDVVLAASVAEAL
Ga0137377_118779731	3300012211	Vadose Zone Soil	MASNEQRFAHRVLLVDDDAAVRAMVNQGLERQGFEV
Ga0157371_111112511	3300013102	Corn Rhizosphere	MTVPERPAAHRVLLVDDDDAVRSMMNLTLESKGFDVV
Ga0157375_137012391	3300013308	Miscanthus Rhizosphere	MTVPERPAAHRVLLVDDDDAVRSMMNSTLESKGFD
Ga0181517_103829751	3300014160	Bog	MTSLEKPTAHKVLLVDGDNAVREMMTATLEHKGFEV
Ga0181531_109439171	3300014169	Bog	MTQIETSASHRVLLVDDDEAIRTMMTLTLVHKGFEVVA
Ga0181526_100400755	3300014200	Bog	MTPAESRVAHKVLLVDDNDAVRTMMSLTLEHKGFEV
Ga0182018_100060653	3300014489	Palsa	MIPTERPIPHKVLLVDDDDAVCHMMTATLARKGFG*
Ga0182014_103415271	3300014491	Bog	MSLTEPPTSHKVLLVDDDAGIREMMTATLEQKGFDVVAAANVTEALKL
Ga0182024_100897494	3300014501	Permafrost	MALAERPISHKVLLVEDDDAIREMMTVTLAHKGST*
Ga0182024_111046302	3300014501	Permafrost	MTPTEPGAARRVLLVDDDDAVRAMMSEGLQRKGFEVTTAA
Ga0181536_103979302	3300014638	Bog	MTPTEVPVAHRVLLVDDDHAVRAMMSATLERKGFDVVAV
Ga0157377_110337401	3300014745	Miscanthus Rhizosphere	MTPAEQPVAHRVLLVDDDDAVRTMMNVTLERKGFDVVVAASVTE
Ga0187877_13328231	3300017931	Peatland	MTPTEPRIAHKVLLVDDDDGVRDMMTATLENKGFEP
Ga0187850_101192732	3300017941	Peatland	MMPTERAVSPRVLLVDDDDGVRAMMTATLEHKGFEV
Ga0187879_100352856	3300017946	Peatland	MTLLEKPIAHRVLLVDDDEAVRSMMSVTLERKGFDVVSAVNVPEALK
Ga0187879_100634274	3300017946	Peatland	MTLLEKPVAHRVLLVDDDEAVRSMMSVTLERKGFDVVSAVNVPEAL
Ga0187847_1000051136	3300017948	Peatland	MTQTNTSVSHRVLLVDDDDGVRDMMTATLENKGFEP
Ga0187847_102465762	3300017948	Peatland	MTQTRTSVSHKVLLVDDDAAVRDMMSRTLKGKGFDVVSAASVV
Ga0187891_12711982	3300017996	Peatland	MKFSDRRCCVSPTEVPVAHRVLLVDDDHAVRAMMNETLERKGFEVVAAASVTE
Ga0187805_102777423	3300018007	Freshwater Sediment	MAPNEPPVAHNVLLVDDDDAVRAMMCATLEHKGFEVV
Ga0187884_103000492	3300018009	Peatland	MTSIGQPVAHRVLLVDDDHAVRAMMNATLERKGFDVVAAASVTEALRHISTESF
Ga0187882_11352612	3300018021	Peatland	MTPTERPISHKVLLVDDDDAVREMMTVTLEHKGFDVVAATNV
Ga0187882_13586761	3300018021	Peatland	MMPTERAVSPRVLLVDDDDGVRAMMTATLEHKGFEVAA
Ga0187864_103005451	3300018022	Peatland	MTQTKTSHSHRVLLVDDDDAVRDMMTETLKVKGFEVVPVACVTAALKFIATE
Ga0187881_101871452	3300018024	Peatland	VTQTKTSVSHRVLLVDDDEAVRAMMSTTLERKGFEVIPACNVTEALKL
Ga0187867_106360332	3300018033	Peatland	MTPIEPSVAHKVLLVDDDDAVRAMMDATLQHKGYKVVAAASV
Ga0187883_101778341	3300018037	Peatland	MTLLEKPIAHRVLLVDDDAAVRSMMSVTLERKGFDVVSAVNVPEALKLITTESF
Ga0187855_106239042	3300018038	Peatland	MTSQEKPIPSKVLLVDDDDAVREMMTQTLQHKGFEV
Ga0187855_107760651	3300018038	Peatland	MASTEQPVSPRVLLVDDDHGVRAMMNAMLEHKGFEVVAAANVTDALRHIATE
Ga0187862_106380571	3300018040	Peatland	MTPTEPRIAHKVLLVDDDDAVRQMMTATLEHKGFR
Ga0187862_108240802	3300018040	Peatland	MTPTERRIAHKVLLVDDDDAIRTMMSLTLEHKGFEVVSAANV
Ga0187890_103613561	3300018044	Peatland	MMPTERAVSPRVLLVDDDDGVRDMMTATLEHKGFEV
Ga0187859_101383703	3300018047	Peatland	MAPTERTSTSHRVLLVDDDDAVRDMMTRTLKQKGFEVVTATN
Ga0187859_102647521	3300018047	Peatland	MTEARTSVSHRVLQVDNDEAVRTVMRAMLGRKGFDVIPAARVMESLKPITAESFC
Ga0187859_103088742	3300018047	Peatland	MMPTERAVSPRVLLVDDDDGVRAMMTATLEHKGFEVAAAANVT
Ga0187858_100277121	3300018057	Peatland	MTLLEKPIAHRVLLVDDDEAVRSMMSVTLERKGFDV
Ga0066662_128817742	3300018468	Grasslands Soil	MAPNEQRFAHRVLLVDDDAAVRAMVNQGLERQGFEVVAAA
Ga0182025_10201602	3300019786	Permafrost	MIPTERPIPHKVLLVDDDDAVCHMMTATLARKGFG
Ga0193729_12252021	3300019887	Soil	MTQTRTSASHKVLLVDDDDAVREMMSAMLQAKGFAVTLAASVT
Ga0210407_1000855111	3300020579	Soil	MTQTQTGVSHRVLLVDDDEGVRDVMRETLQAKGVDVVPAGNVREAMATLQ
Ga0210407_100390305	3300020579	Soil	MTPTEPPIAHKVLLVDDDDAVRTMMTLTLEHKGFGVVSAANVTQA
Ga0210407_103201023	3300020579	Soil	MTATERPVVSHKVLLVDDDEAVRNMMTATLERKGFGVVAVANVTEALKL
Ga0210403_102958542	3300020580	Soil	MTLAERPISHKVLLVDDDDAIREMMTASLAHKGFDVITAANVTEALKLITT
Ga0210403_106631991	3300020580	Soil	MTPIKTGTSHRVLLVDDDESVREMMSLTLEKKGFEVVP
Ga0210403_109034132	3300020580	Soil	MTQTKTSDSHRVLLVDDDEAVRTMMTATLERKGFDVIPAAGVVEALKLIM
Ga0210399_104990161	3300020581	Soil	MTLAERPISHKVLLVDDDDAIREMMTATLAHKGFDVVSAAN
Ga0210395_101680461	3300020582	Soil	MTQTKTSISHRVLLVDDDEAVRSMMTATLEHKGFEVVPAASVTEALKL
Ga0210395_110881722	3300020582	Soil	MSLTETGAAHRVLLVDDDDAVRAMMNATLEDKGFDVVV
Ga0210404_100067542	3300021088	Soil	MSPAGRPVAHRVPLVDDDNGVRAMMNATLERKGFEVVAAASVAEALRSLLRASTS
Ga0210405_101161024	3300021171	Soil	MTPTEPLIAHKVLLVDDDDAVREMMTVTLEHKGFAVVAAANVTETLKLIT
Ga0210396_116881611	3300021180	Soil	MSPAGRPVAHRVPLVDDDNGVRVMMNATLERKGFEVVAAASVTEALRSLLRAS
Ga0210388_101421883	3300021181	Soil	MAPTEQPVLHRVLLVDDVDDDDGVRAMVYATLEPRGFDVVAPASVTEALRHIATQSLDG
Ga0210388_108873881	3300021181	Soil	MTPTEPRVSHKVLLVDDDEAIREMMTATLAHKGFDVVAAA
Ga0210388_110354701	3300021181	Soil	MTQAQTSVSQRVLLVDDDEAVRSMMTATLEHKGVKVVPAASFSGSTLRG
Ga0210388_118176061	3300021181	Soil	MTPTEPPVTPRVLLVDDDDGVRAMMSESLEGKGFAVVAAANVT
Ga0210393_102198081	3300021401	Soil	MNPTKTSATHRVLLVDDDEAVREVMTLTLAAKGFD
Ga0210393_108999702	3300021401	Soil	MTQTRTSVSHKVLLVDDDEAVRDMMSRTLVGKGFDVV
Ga0210383_111673801	3300021407	Soil	MTPTEPRIAHKVLLVDDDDAIRRMMSLTLEHKGFEVVSAVNVTEALKL
Ga0210383_117382882	3300021407	Soil	MLPQETPHKVLLVDDDEAIRELTKAQLVRKGFEVVTAGCVTEALQLIAT
Ga0210394_100286072	3300021420	Soil	MTQAQTSVFQRVLLVDDDEAVRSMMTATLEHKGFKVVPAASFSGSTLRG
Ga0210391_100096229	3300021433	Soil	MTPTEKSVVHRVLLVDDDEAVRTMMNATLERKGFDVVNAASV
Ga0210391_106659022	3300021433	Soil	MTLAERPVSHRVLLVDDDDALREMMTATLAQKGFEVVAAANVTQA
Ga0210390_103688412	3300021474	Soil	MIQTETVASHRVLLVDDDEVIRTMMTLTLVHKGFEVVA
Ga0210390_104151441	3300021474	Soil	MTQTKTSSSHRVLLVDDDEDIRAVMSATLDRKGFDVIAAGSVTEALKLITTASF
Ga0210390_105613411	3300021474	Soil	MTPTEPPISHKVLLVDDDDAVRDMMTTTLERKGFEVVSAANVTEALKLITTESF
Ga0210390_106795751	3300021474	Soil	MTQTRTSVSHRVLLVDDDEAVRDMMSRTLVGKGFDVVAAASV
Ga0210410_100873514	3300021479	Soil	MTPTEQAVLHRVLLVDDDDAVRTMMNVTLERKGFEVVAASNVAEAL
Ga0210410_105394991	3300021479	Soil	MTPTERPGSHKVLLVDDDEAIRDMMTATLEHKGFDLVAAANVTEALN
Ga0210410_107039822	3300021479	Soil	MTQTKTSDSHRVLLVDDDEAVRTMMTATLERKGFDVIPAAGVVEALKL
Ga0212123_101997402	3300022557	Iron-Sulfur Acid Spring	MTPAEHSISHKVLLVDDDDAVCEMMTGTLEHTGFGVVAAVNVTGALKRI
Ga0212123_107234771	3300022557	Iron-Sulfur Acid Spring	MTQTKTSVSHRVLLVDDDEAVRTMMSATLERKGFEVLPAA
Ga0224549_10429061	3300022840	Soil	MTPTEPRVAHKVLLVDDDDAIRDMMSQTLEHKGFAVVSAAN
Ga0224554_10896152	3300023068	Soil	MTSIGQLVAHRVLLVDDDHAVRTMMNATLERKGFDVVAAASVTEA
Ga0224551_10458822	3300023259	Soil	MTPTEPRISHKVLHVDDDEAIREMMTATLAHKGFDVVAAANVKEALKL
Ga0208936_10516571	3300025404	Peatland	MTPTERPTNKVLLVDDDDAVREMMTATLEHKGFGVVAAA
Ga0208190_10124351	3300025473	Peatland	MMPTERAVSPRVLLVDDDDGVRAMMTATLEHKGFEVAAAANVTEALRLITA
Ga0208192_11030661	3300025477	Peatland	MTLLEKPVAHRVLLVDDDEAVRSMMSVTLERKGFDVVSAV
Ga0208819_10567031	3300025498	Peatland	VTQTKTSVSHRVLLVDDDEAVRAMMSTTLERKGFEVIPACNV
Ga0207707_102952822	3300025912	Corn Rhizosphere	MGSMIPSTLHKVLLVDDDSAVRNMMELTLEYKGFKVVSAANVTEALK
Ga0207700_113455782	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MATPEERISHKVLLVDDDDAVRDMMSATLELRDFEVVAAANVPDAL
Ga0209838_10272311	3300026214	Soil	MTQTEPRVAHRVLLVDDDGAVRAMMNEALTRKGFEVATAS
Ga0209839_100656293	3300026294	Soil	MTPTEPRVAQKVLLVDDDDAIRTMMSLTLEHKGFAVVS
Ga0257153_10019752	3300026490	Soil	MTPTERPIPHKVLLVDDDEAVRNMMTATLERKGFGVVSVADVTEALKLITTEPF
Ga0208241_10102091	3300027297	Forest Soil	MPPIESSVARKVLLVDDDDAVRAMMDATLQRKGFEVVAAASVTEA
Ga0208241_10264511	3300027297	Forest Soil	MTHNETSVPHRVLLVDDDDGVRDMMRVTLEHKGFDVVPAVNVTGALKL
Ga0208199_11282962	3300027497	Peatlands Soil	MTPTDPPVAHKVLVVDDDDGVRAMMTATLKHKGFDVVAAA
Ga0209008_10523912	3300027545	Forest Soil	MTPTEPRISHKVLLVDDDEAIREMMTATLAHKGFDVVAAATV
Ga0208324_12191511	3300027604	Peatlands Soil	MTPTEPRAAHRVLLVDDDAAVRSMMTQALERKGFEVV
Ga0208827_12091192	3300027641	Peatlands Soil	MTPTEPSVAHKVLLVDDDNAVRDMMTMTLEHKGFEVVAAASVTEALR
Ga0209007_10099593	3300027652	Forest Soil	MTLAERPVSHRVLLVDDDDALREMMTATLALKGFEVVAAANVTQALKLITT
Ga0209736_11100991	3300027660	Forest Soil	MTPTGQPVAHRVLLVDDDNAVLAMMTATLTHKGFDVV
Ga0209736_11458752	3300027660	Forest Soil	MTPTEQPVAHRVLLVDDDNAVLAMMTATLTHKGFDVV
Ga0209011_11123182	3300027678	Forest Soil	MTPTEPLVAHKMLLVDDNDAVRAMMNIAFERKGSDVIALPA
Ga0209328_102088751	3300027727	Forest Soil	MTPTEPPVAHRVLLVDDDEAVRAMMNATLERKGFDVVNAASVSEA
Ga0209274_100449951	3300027853	Soil	MTPTEPLIAHKVLLVDDDDAVRTMMTLTLEHKGFGVVSAANV
Ga0209274_100822543	3300027853	Soil	MTPTEPRVAHKVLLVDDDDAIRDMMSQTLEHKGFAVVS
Ga0209274_103890693	3300027853	Soil	MTPTERRISHKVLLVDDDAALRTMMTMTLKYKGFEVVSAANVTEA
Ga0209274_106419501	3300027853	Soil	MTQAQTSVSQRVLLVDDDEAVRSMMTATLEHKGVKVVPAASFSGSTLR
Ga0209167_101732451	3300027867	Surface Soil	MTPSTFPVSHRVLLVDDDDAIRETMAITLQRKGFEVVAAN
Ga0209169_101302892	3300027879	Soil	MTPTEPTVAHQALLRVLLVDDDDAVRDMMTLTLEHKGFKVVTAA
Ga0209275_106716871	3300027884	Soil	MTPTEPLIAHKVLLVDDDDAVRTMMTLTLEHKGFGVVSAANVT
Ga0209380_103892512	3300027889	Soil	MTQTKTSTSHRVLLVDDDDAVREMMSAILQAKGFDVVLAASVTEALK
Ga0209380_104461481	3300027889	Soil	MTQTRTSVSHKVLLVDDDEAVRDMMSRTLVGKGFDVVAAASV
Ga0209380_105381021	3300027889	Soil	MTQTKTSASRKVLLVDDDDAVREMMSAILQAKGFAVTLA
Ga0209006_105311151	3300027908	Forest Soil	MTAMAQTGTSASHRVLLVDDDEAIRTMMTLTLEHKG
Ga0209006_107557501	3300027908	Forest Soil	MTQTKTSASRKVLLVDDDDAVREMMSAILQAKGFAVTLAASVTEALRLIVTETF
Ga0209698_111986651	3300027911	Watersheds	MTPAGPRVAHKLLIVDDDDAVRTMMTATLELKGFEVVAAASV
Ga0209698_113580901	3300027911	Watersheds	MIPTALPVAHKVLLVDDDDAVREVMTETLERKGFHVVAAASVTEALRH
Ga0265356_10171861	3300028017	Rhizosphere	MTPTERRISHKVLLVDDDAALRTMMTMTLKYKGFEVVSAANVTEALKL
Ga0308309_100178839	3300028906	Soil	MTQTKTSISHRVLLVDDDEAVRDMMSTTLEHKGFEVVPA
Ga0222749_102572821	3300029636	Soil	VTQTKTSVSHRVLLVDDDEAVRTMMSMTLRGKGFEV
Ga0311340_108586092	3300029943	Palsa	MPQIKSSVSHRVLLVDDDEAVREVMGMTLESKGFNVTPAAS
Ga0302188_104605491	3300029986	Bog	MPQIKSSVSHRVLLVDDDEAVREVMGMTLESKGFNVTPAASVTAALRF
Ga0302177_101584743	3300030053	Palsa	MTLNAPLTAHKVLLVDDNDAVRNMMMTVLERKGFA
Ga0302179_100370274	3300030058	Palsa	MTLNAPLTAHKVLLVDDNDAVRNMMMTVLERKGFAVVAAANVTEA
Ga0311353_115050441	3300030399	Palsa	VLLYVPKGVMLTLPDKPVSHKVLLVDDDDAVREMMTITLGRKGFEVVAAT
Ga0310037_102576431	3300030494	Peatlands Soil	MTPTELPIPRRVLLVDDDDAVREMMTLTLQHRAFEVVAAANVTEALK
Ga0311370_121295182	3300030503	Palsa	MTHPEKPVSHKVLLVDDDDAVREMMTTTLARKGFAVVAATNV
Ga0265762_10330011	3300030760	Soil	MTAMTQIETSASRRVLLVDDDEAVRTMMTLTLEHKGFEVVAAANVTEALKLIT
Ga0265753_10028924	3300030862	Soil	MTPTEPRVSHKVLLVDDDEAIREVMTATLAHKGFDVVAAANVTEALKLIT
Ga0265760_100650732	3300031090	Soil	MTQTKTSLTHRVLLVDDDEAVRSMMSRTLEGKGFDVVAAASVVEALKF
Ga0170824_1180014632	3300031231	Forest Soil	MTLAERSIAHVLLVDDDDAVRNMMTVTLEHKGFNVVSAASVTD
Ga0302323_1025673172	3300031232	Fen	MTPTERPVAYKVLLVDDDEAVSEMMKMTLESKGFDVVAATS
Ga0302324_1025877641	3300031236	Palsa	LTLSEQPVPNKVLLVDDDDSVREMMTITLARKGFEVVAATNVTEALKLITI
Ga0265320_101634941	3300031240	Rhizosphere	MTQTETGVAHRVLLVDDDGAVRAMMNEALTRKGFEVVTAECVPD
Ga0265325_102573512	3300031241	Rhizosphere	MTQTTTSVPHRVLLVDDDDAVRTMMSLTLEHKSFEVVSAANVTEALKL
Ga0170819_150180301	3300031469	Forest Soil	MIATQTPATHRILLVDDDDAVRAMMNATLERKGFKVVPA
Ga0170818_1080629681	3300031474	Forest Soil	MIATETSATHRILLVDDDDAVRAMMNATLERKGFEVVPATNVSEALRQLN
Ga0302326_106180781	3300031525	Palsa	MAPTEQPVPHRVLLVDDDDGVRAMMNAMLERKGFEVVAAANVTDA
Ga0310686_1153645291	3300031708	Soil	MTPIDPPVAHRVLVVDDDNAVRAMMKATLERKGFD
Ga0265314_100127111	3300031711	Rhizosphere	MTQTTTSVPHRVLLVDDDDAVRTMMSLTLEHKSFEVVSAANVTEALK
Ga0307476_104894501	3300031715	Hardwood Forest Soil	MPPTERTVSHRVLLVDDDDAVRAMMNASLERKGFEVVSAANVADA
Ga0310813_111360211	3300031716	Soil	MTVPERPAAHRVLLVDDDDAVRSMMNLTLESRGFDVVAAA
Ga0307474_101130631	3300031718	Hardwood Forest Soil	MSPAGRPVAHRVPLVDDDNGVRAMMNATLERKGFEVVA
Ga0307474_105224284	3300031718	Hardwood Forest Soil	MTPTEPRVSHKVLLVDDDEAIREMMTATLAHKGFDVVAAANVTE
Ga0307474_111430311	3300031718	Hardwood Forest Soil	MSPTERPVAHKVLLVDDDDAVRGMMNATLERKGFAVVAAASVTQALRR
Ga0307477_104838311	3300031753	Hardwood Forest Soil	MTPTASAVARKVLLVDDDDAVRDVMTETLERNGFHV
Ga0307475_101319852	3300031754	Hardwood Forest Soil	MSPAGRPVAHRVPLVDDDNGVRAMMNATLERKGFEVVAAASVTEALRSLLRASTS
Ga0307475_107280332	3300031754	Hardwood Forest Soil	MTPTELTVSHIHRVLLVDDDDAVRAMMNATLERRGFEVVPAANV
Ga0307475_113132471	3300031754	Hardwood Forest Soil	MTPTEQTVAHRVLLVDDDDAVLAMMTATLTRKGFE
Ga0316046_1060091	3300031817	Soil	MTPTERRIAHKVLLVDDDDAIREMMTVTLEHKGFAVIAAANVTEALKL
Ga0307478_110744532	3300031823	Hardwood Forest Soil	MTPTELIVSHIHRVLLVDDDDAVRAMMNATLERRGFEVVPAA
Ga0311301_121275091	3300032160	Peatlands Soil	MNPTEPRAGRRVLLVDDDLAVRSMMTQGLERKGFDVVG
Ga0307471_1034851891	3300032180	Hardwood Forest Soil	MSPTGRLVAHRVPLVDEDNGVRAMMNATLERKGFEVVAAAS
Ga0315742_110988431	3300032756	Forest Soil	MTPTERRIAHKVLLVDDDDAVRDMMTVTLEHKGFVVVAATNVTEALKL
Ga0334854_104618_566_679	3300033829	Soil	MSPTKQGVSHRVLLVDDDEAVRTMMSATLERKGFEVVC
Ga0370484_0221286_3_137	3300034125	Untreated Peat Soil	MTPTELSVAHRVLLVDDDHGVRAMMNATLERKGFDVVAVASVTEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F029160

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences