Metagenome / Metatranscriptome Family F028729

Basic Information
Family ID	F028729
Family Type	Metagenome / Metatranscriptome
Number of Sequences	190
Average Sequence Length	41 residues
Representative Sequence	MCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNAAPS
Number of Associated Samples	139
Number of Associated Scaffolds	190

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.63 %
% of genes near scaffold ends (potentially truncated)	97.37 %
% of genes from short scaffolds (< 2000 bps)	91.58 %
Associated GOLD sequencing projects	130
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Bacteria (88.947 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.421 % of family members)
Environment Ontology (ENVO)	Unclassified (28.947 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.263 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.43% β-sheet: 13.43% Coil/Unstructured: 73.13%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 190 Family Scaffolds
PF03401	TctC	6.84
PF02586	SRAP	3.68
PF14520	HHH_5	3.16
PF00580	UvrD-helicase	2.63
PF00589	Phage_integrase	2.11
PF01844	HNH	2.11
PF00106	adh_short	1.05
PF10108	DNA_pol_B_exo2	1.05
PF13964	Kelch_6	0.53
PF13406	SLT_2	0.53
PF02735	Ku	0.53
PF00166	Cpn10	0.53
PF04828	GFA	0.53
PF13560	HTH_31	0.53
PF02594	DUF167	0.53
PF04298	Zn_peptidase_2	0.53
PF11159	DUF2939	0.53
PF00561	Abhydrolase_1	0.53
PF09994	DUF2235	0.53
PF01972	SDH_sah	0.53
PF01070	FMN_dh	0.53
PF00857	Isochorismatase	0.53
PF01068	DNA_ligase_A_M	0.53
PF01527	HTH_Tnp_1	0.53
PF03466	LysR_substrate	0.53
PF04317	DUF463	0.53
PF07669	Eco57I	0.53
PF03779	SPW	0.53
PF08843	AbiEii	0.53
PF00190	Cupin_1	0.53
PF00582	Usp	0.53
PF13458	Peripla_BP_6	0.53
PF03551	PadR	0.53
PF00034	Cytochrom_C	0.53
PF12680	SnoaL_2	0.53
PF04430	DUF498	0.53
PF00903	Glyoxalase	0.53
PF13460	NAD_binding_10	0.53
PF13589	HATPase_c_3	0.53
PF04226	Transgly_assoc	0.53
PF00389	2-Hacid_dh	0.53
PF00872	Transposase_mut	0.53
PF12706	Lactamase_B_2	0.53
PF00005	ABC_tran	0.53
PF00664	ABC_membrane	0.53
PF01135	PCMT	0.53

COG ID	Name	Functional Category	% Frequency in 190 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	6.84
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	3.68
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	2.63
COG3973	DNA helicase IV	Replication, recombination and repair [L]	2.63
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	2.63
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.05
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.53
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.53
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.53
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.53
COG3106	Ras-like GTP-binding stress-induced protein YcjX, DUF463 family	Signal transduction mechanisms [T]	0.53
COG2738	Zn-dependent membrane protease YugP	Posttranslational modification, protein turnover, chaperones [O]	0.53
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.53
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.53
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.53
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.53
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.53
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.53
COG1872	Uncharacterized conserved protein YggU, UPF0235/DUF167 family	Function unknown [S]	0.53
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.53
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.53
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.53
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.53
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.53
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.53
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.53
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.53
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.53
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.53
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.95 %
Unclassified	root	N/A	11.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.95 %
Unclassified	root	N/A	11.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.95 %
Unclassified	root	N/A	11.05 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	76.32 %
Unclassified	root	N/A	11.05 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.53 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	68.42 %
Unclassified	root	N/A	11.05 %
Acidithiobacillia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia	0.53 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.53 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.53 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.53 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.53 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	43.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.42 %
Unclassified	root	N/A	11.05 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.53 %
Acidithiobacillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales	0.53 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.53 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.53 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.53 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.16 %
Unclassified	root	N/A	11.05 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.32 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.11 %
unclassified Acidithiobacillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → unclassified Acidithiobacillales	0.53 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.53 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.53 %
Shewanellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae	0.53 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.53 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.53 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.53 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.16 %
Unclassified	root	N/A	11.05 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.68 %
Variibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter	1.05 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	1.05 %
Acidithiobacillales bacterium SG8_45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → unclassified Acidithiobacillales → Acidithiobacillales bacterium SG8_45	0.53 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.53 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.53 %
Methylocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa	0.53 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.53 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.53 %
Shewanellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae	0.53 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.53 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.16 %
Unclassified	root	N/A	11.05 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	1.05 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	1.05 %
Xanthobacter flavus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → Xanthobacter flavus	1.05 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.53 %
Methylocapsa aurea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa aurea	0.53 %
Acidithiobacillales bacterium SG8_45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → unclassified Acidithiobacillales → Acidithiobacillales bacterium SG8_45	0.53 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.53 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.53 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.53 %
Shewanellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae	0.53 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.53 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.16 %
Unclassified	root	N/A	11.05 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	1.05 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	1.05 %
Xanthobacter flavus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → Xanthobacter flavus	1.05 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	0.53 %
Methylocapsa aurea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa aurea	0.53 %
Acidithiobacillales bacterium SG8_45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → unclassified Acidithiobacillales → Acidithiobacillales bacterium SG8_45	0.53 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.53 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.53 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.53 %
Shewanellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae	0.53 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.53 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT02G4TO5	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
2170459021\|G14TP7Y02F3ADX	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10016408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1788	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10078114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1059983	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300004479\|Ga0062595_101110328	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300005093\|Ga0062594_102961358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	530	Open in IMG/M
3300005445\|Ga0070708_101368801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	660	Open in IMG/M
3300005447\|Ga0066689_10286404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1020	Open in IMG/M
3300005459\|Ga0068867_101896450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300005564\|Ga0070664_101020300	Not Available	778	Open in IMG/M
3300005587\|Ga0066654_10545779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	638	Open in IMG/M
3300005598\|Ga0066706_10769111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300005598\|Ga0066706_11059295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300005713\|Ga0066905_100084206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2101	Open in IMG/M
3300005713\|Ga0066905_100912370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	769	Open in IMG/M
3300005713\|Ga0066905_101983743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300005764\|Ga0066903_102916785	Not Available	927	Open in IMG/M
3300005764\|Ga0066903_104039059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	786	Open in IMG/M
3300005764\|Ga0066903_104654149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	731	Open in IMG/M
3300005764\|Ga0066903_106618612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300005764\|Ga0066903_106756595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300005764\|Ga0066903_107701198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	554	Open in IMG/M
3300006050\|Ga0075028_100196401	All Organisms → cellular organisms → Bacteria → Proteobacteria	1087	Open in IMG/M
3300006059\|Ga0075017_101685723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300006086\|Ga0075019_10656125	Not Available	661	Open in IMG/M
3300006086\|Ga0075019_10893067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → unclassified Acidithiobacillales → Acidithiobacillales bacterium SG8_45	570	Open in IMG/M
3300006881\|Ga0068865_101078131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	707	Open in IMG/M
3300009094\|Ga0111539_11829694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300009137\|Ga0066709_102824756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300009148\|Ga0105243_13000051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300009162\|Ga0075423_12832484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300009519\|Ga0116108_1051812	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300009521\|Ga0116222_1277849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	723	Open in IMG/M
3300009522\|Ga0116218_1291619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	731	Open in IMG/M
3300009553\|Ga0105249_11064578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	878	Open in IMG/M
3300009630\|Ga0116114_1001372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12966	Open in IMG/M
3300009637\|Ga0116118_1198488	Not Available	630	Open in IMG/M
3300009640\|Ga0116126_1105407	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300009698\|Ga0116216_10481566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	751	Open in IMG/M
3300009839\|Ga0116223_10607757	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300009839\|Ga0116223_10892790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300010043\|Ga0126380_10548744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300010043\|Ga0126380_12270794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa aurea	503	Open in IMG/M
3300010046\|Ga0126384_11747331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300010047\|Ga0126382_11380380	Not Available	641	Open in IMG/M
3300010166\|Ga0126306_11408045	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010339\|Ga0074046_10611910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	644	Open in IMG/M
3300010358\|Ga0126370_10177034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1586	Open in IMG/M
3300010376\|Ga0126381_100358792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2017	Open in IMG/M
3300010376\|Ga0126381_101828873	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300010376\|Ga0126381_103786214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	591	Open in IMG/M
3300010376\|Ga0126381_104377858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300010379\|Ga0136449_100616009	All Organisms → cellular organisms → Bacteria → Proteobacteria	1845	Open in IMG/M
3300010379\|Ga0136449_102290876	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300010379\|Ga0136449_103524130	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300010400\|Ga0134122_11465600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	700	Open in IMG/M
3300010403\|Ga0134123_13484839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300012096\|Ga0137389_11225919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300012199\|Ga0137383_10616255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300012200\|Ga0137382_10893985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300012202\|Ga0137363_11208941	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300012210\|Ga0137378_10315596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1454	Open in IMG/M
3300012359\|Ga0137385_10782116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	794	Open in IMG/M
3300012361\|Ga0137360_11823479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300012361\|Ga0137360_11829309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300012977\|Ga0134087_10045092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1721	Open in IMG/M
3300012987\|Ga0164307_11644899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae	544	Open in IMG/M
3300014159\|Ga0181530_10032343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3699	Open in IMG/M
3300014162\|Ga0181538_10378307	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300014325\|Ga0163163_11830977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300014495\|Ga0182015_10828014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	581	Open in IMG/M
3300014638\|Ga0181536_10319353	Not Available	716	Open in IMG/M
3300015372\|Ga0132256_102605758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	606	Open in IMG/M
3300015372\|Ga0132256_102615555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300015374\|Ga0132255_104035684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300016270\|Ga0182036_10712150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	813	Open in IMG/M
3300016294\|Ga0182041_10388652	All Organisms → cellular organisms → Bacteria → Proteobacteria	1184	Open in IMG/M
3300016294\|Ga0182041_10876922	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300016294\|Ga0182041_10883815	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300016294\|Ga0182041_10982513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300016294\|Ga0182041_11075287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	730	Open in IMG/M
3300016294\|Ga0182041_11158433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	704	Open in IMG/M
3300016319\|Ga0182033_10858081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → Xanthobacter flavus	802	Open in IMG/M
3300016319\|Ga0182033_11231593	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300016341\|Ga0182035_10584507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	963	Open in IMG/M
3300016371\|Ga0182034_10357384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1187	Open in IMG/M
3300016371\|Ga0182034_10724776	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300016371\|Ga0182034_11278075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300016387\|Ga0182040_10585635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300016387\|Ga0182040_11773091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300016387\|Ga0182040_11962369	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300016404\|Ga0182037_11148209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300016404\|Ga0182037_11268187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300016422\|Ga0182039_10070743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2466	Open in IMG/M
3300017926\|Ga0187807_1341197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300017939\|Ga0187775_10207155	Not Available	731	Open in IMG/M
3300017943\|Ga0187819_10341174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300017946\|Ga0187879_10725132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	554	Open in IMG/M
3300017948\|Ga0187847_10492120	Not Available	679	Open in IMG/M
3300017955\|Ga0187817_10752655	Not Available	622	Open in IMG/M
3300017955\|Ga0187817_10810123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300017972\|Ga0187781_10838064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	668	Open in IMG/M
3300017974\|Ga0187777_10111130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1807	Open in IMG/M
3300017974\|Ga0187777_10586188	Not Available	785	Open in IMG/M
3300017995\|Ga0187816_10483667	All Organisms → cellular organisms → Bacteria → Proteobacteria	556	Open in IMG/M
3300017995\|Ga0187816_10511724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300017996\|Ga0187891_1000785	All Organisms → cellular organisms → Bacteria	30174	Open in IMG/M
3300018003\|Ga0187876_1309184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300018007\|Ga0187805_10341698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300018014\|Ga0187860_1036315	Not Available	2625	Open in IMG/M
3300018017\|Ga0187872_10004416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	10610	Open in IMG/M
3300018017\|Ga0187872_10074596	Not Available	1749	Open in IMG/M
3300018017\|Ga0187872_10179035	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300018019\|Ga0187874_10119049	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300018058\|Ga0187766_11118136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300018081\|Ga0184625_10588305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	547	Open in IMG/M
3300018085\|Ga0187772_11183856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300018469\|Ga0190270_12413539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	587	Open in IMG/M
3300018469\|Ga0190270_13026938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300021168\|Ga0210406_10121612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2206	Open in IMG/M
3300021168\|Ga0210406_10997496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300021178\|Ga0210408_11206382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300021420\|Ga0210394_11155633	Not Available	666	Open in IMG/M
3300021432\|Ga0210384_11595558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300021478\|Ga0210402_10660101	Not Available	968	Open in IMG/M
3300021479\|Ga0210410_11506148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300021559\|Ga0210409_10792150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	820	Open in IMG/M
3300021559\|Ga0210409_11289528	Not Available	606	Open in IMG/M
3300021860\|Ga0213851_1756298	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300025916\|Ga0207663_10021625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3665	Open in IMG/M
3300025929\|Ga0207664_11824167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300025945\|Ga0207679_11943158	Not Available	536	Open in IMG/M
3300025945\|Ga0207679_12094468	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300026277\|Ga0209350_1129497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	568	Open in IMG/M
3300026308\|Ga0209265_1052868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1249	Open in IMG/M
3300026547\|Ga0209156_10173129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300026896\|Ga0207730_1001776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2433	Open in IMG/M
3300027583\|Ga0209527_1020657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1454	Open in IMG/M
3300027909\|Ga0209382_11498642	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300027910\|Ga0209583_10289977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	738	Open in IMG/M
3300027915\|Ga0209069_10692975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300028710\|Ga0307322_10176069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	577	Open in IMG/M
3300028713\|Ga0307303_10172868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300028720\|Ga0307317_10330023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300029636\|Ga0222749_10090432	All Organisms → cellular organisms → Bacteria → Proteobacteria	1422	Open in IMG/M
3300029636\|Ga0222749_10403602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	725	Open in IMG/M
3300030707\|Ga0310038_10396453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	601	Open in IMG/M
3300031231\|Ga0170824_122245502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300031474\|Ga0170818_114222589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300031543\|Ga0318516_10030841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2828	Open in IMG/M
3300031640\|Ga0318555_10035717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2450	Open in IMG/M
3300031682\|Ga0318560_10369306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	775	Open in IMG/M
3300031682\|Ga0318560_10493983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	663	Open in IMG/M
3300031682\|Ga0318560_10745640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300031708\|Ga0310686_104312436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300031719\|Ga0306917_11399760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	539	Open in IMG/M
3300031724\|Ga0318500_10690943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300031744\|Ga0306918_10352202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → Xanthobacter flavus	1142	Open in IMG/M
3300031748\|Ga0318492_10427604	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300031765\|Ga0318554_10066386	All Organisms → cellular organisms → Bacteria → Proteobacteria	1993	Open in IMG/M
3300031768\|Ga0318509_10374615	Not Available	796	Open in IMG/M
3300031777\|Ga0318543_10012080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3047	Open in IMG/M
3300031777\|Ga0318543_10376597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300031793\|Ga0318548_10196090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	990	Open in IMG/M
3300031845\|Ga0318511_10129593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1092	Open in IMG/M
3300031890\|Ga0306925_11499549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300031894\|Ga0318522_10012632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2590	Open in IMG/M
3300031910\|Ga0306923_11855708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300031910\|Ga0306923_12249856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	545	Open in IMG/M
3300031912\|Ga0306921_11249741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	824	Open in IMG/M
3300031912\|Ga0306921_11491167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300031941\|Ga0310912_10725156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	770	Open in IMG/M
3300031942\|Ga0310916_10070236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2738	Open in IMG/M
3300031945\|Ga0310913_10829899	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300031954\|Ga0306926_11265675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300031954\|Ga0306926_11972381	Not Available	657	Open in IMG/M
3300031954\|Ga0306926_12141210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300032051\|Ga0318532_10091981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1066	Open in IMG/M
3300032059\|Ga0318533_10154112	Not Available	1627	Open in IMG/M
3300032063\|Ga0318504_10637714	Not Available	512	Open in IMG/M
3300032067\|Ga0318524_10459567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300032160\|Ga0311301_12419568	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300032160\|Ga0311301_12495508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300032261\|Ga0306920_102507567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300032261\|Ga0306920_102863413	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300033289\|Ga0310914_10620011	All Organisms → cellular organisms → Bacteria → Proteobacteria	974	Open in IMG/M
3300033289\|Ga0310914_10757522	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300033289\|Ga0310914_11034901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	721	Open in IMG/M
3300033805\|Ga0314864_0058605	Not Available	890	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.58%
Host-Associated	Host-Associated	7.37%
Engineered	Engineered	1.05%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.26%
Aquatic	Environmental → Aquatic	16.32%
Plants	Host-Associated → Plants	7.37%
Solid Waste	Engineered → Solid Waste	1.05%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.26%
Freshwater	Environmental → Aquatic → Freshwater	12.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.26%
Sediment	Environmental → Aquatic → Sediment	3.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.58%
Grass	Engineered → Solid Waste → Grass	1.05%
Roots	Host-Associated → Plants → Roots	0.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.11%
Loam	Environmental → Terrestrial → Soil → Loam	7.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.05%
Composting	Engineered → Solid Waste → Grass → Composting	1.05%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.53%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.53%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.21%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.21%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.58%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.05%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	1.05%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.53%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.53%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.32%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.21%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.16%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.58%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.05%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.05%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.05%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	1.05%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.53%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.53%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.53%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.53%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.53%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026896	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 71 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F028729

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_00041780	2170459014	Switchgrass, Maize And Mischanthus Litter	MCGRVIQSGGPLRYAIVDGLNVRDSRVHDYPRDGTAAPSQELLV
4NP_01040960	2170459021	Switchgrass, Maize And Mischanthus Litter	MCGRVIQSSGPLRYAMVDGVNVRDSRVHNYPPRLN
AF_2010_repII_A001DRAFT_100164083	3300000793	Forest Soil	MRPLCGRVIQSSGPLRYAIVDGMNVRDSRMHNYPP
AF_2010_repII_A001DRAFT_100781141	3300000793	Forest Soil	MCGRVIQSSGPLRYAIVDGISVRDSRVHNYPPRWNAAPSQELLV
AP72_2010_repI_A100DRAFT_10599832	3300000837	Forest Soil	MCGRVIQAQSSDPLRYAIVDGMNVRDSRVHNYPPRW
Ga0062595_1011103281	3300004479	Soil	MCGRVIQSSAPIKYGIVDGLNVRDSRLQNYPSRWNGAPSQGLLVI
Ga0062594_1029613581	3300005093	Soil	MCGRIIQSGGPLRYAIVDGLNTRDSRVHNYPPRWNAAPSQELLV
Ga0070708_1013688012	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MCGRIIQSSAPLRYAIVDGMNVRDSRLHNHPPRWNAAPSQDLL
Ga0066689_102864042	3300005447	Soil	MCGRVIQSSGPLRYAIVDGMNVREGRLHNYPPRWNAAPSQDL*
Ga0068867_1018964501	3300005459	Miscanthus Rhizosphere	MCGRVIQSSGSLRYSFVDGMNVRDSRVHSYPPRWDAAPSQE
Ga0070664_1010203003	3300005564	Corn Rhizosphere	MCGRVIQSSEPLAYAIVDGMDVRDTRLHNHPPRWN
Ga0066654_105457791	3300005587	Soil	MCERVIQSGGPLRYGIVEGLDVRDNRVHNYPPRWNAAPSQELLVI
Ga0066706_107691112	3300005598	Soil	MCGRVIQSGGPIRYAIVDGIDVPDSRVHNYPPRWNAA
Ga0066706_110592952	3300005598	Soil	MCGRVIQRSGPLRYAIVDGMNVRDSRVHNYPPRWNG
Ga0066905_1000842067	3300005713	Tropical Forest Soil	MQAMCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNAAPSQ
Ga0066905_1009123702	3300005713	Tropical Forest Soil	MCGRVIQSSGPLRYALVDGMNVRDSRVHNYPPRWNAAPSQELLVI
Ga0066905_1019837431	3300005713	Tropical Forest Soil	MTIWLPVCGRVIQSSGPLRYAIVDGMNVRDSRVHNY
Ga0066903_1029167851	3300005764	Tropical Forest Soil	MCGRVIQSGGPLRYTIVDGLNVRDSRVHNYPARWN
Ga0066903_1040390591	3300005764	Tropical Forest Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNAAPSQEL
Ga0066903_1046541492	3300005764	Tropical Forest Soil	MCGRIIQSSGPVRYAIIDGLNMCDSRVHNYPPRWN
Ga0066903_1066186121	3300005764	Tropical Forest Soil	CGRVIQASSPLKLAIVDGMSVRDSRLTNHPPHYNGAPSQDLW*
Ga0066903_1067565951	3300005764	Tropical Forest Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRFHNYPPRWNGAPSQE
Ga0066903_1077011982	3300005764	Tropical Forest Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRMHNYPPRWNGAPSQDLL
Ga0075028_1001964011	3300006050	Watersheds	MCGRVIQSSGPLRYAILEGMDVRDSRTHNYPPRWNGAPSQD
Ga0075017_1016857231	3300006059	Watersheds	MCGRVIQSSGPLRYAILEGMDVRDNRVHNYPARWN
Ga0075019_106561251	3300006086	Watersheds	MCGRVIQSSPLTRLAIVEGLDVGDSRFHNYPPRWNGA
Ga0075019_108930672	3300006086	Watersheds	IQSSAPIRYAIVDGMNVRDSRVHNYPPRWNAAPKQLHPVSDEPLPQ*
Ga0068865_1010781311	3300006881	Miscanthus Rhizosphere	MCGRVIQSSGPLRYSFVDGMSVRDSRVHSYPPRWDAAPSQELLVIR
Ga0111539_118296942	3300009094	Populus Rhizosphere	MCGRIIQSGGPFRYAIVDGMNARDSRVHNYPPRWNGAPSQELLVI
Ga0066709_1028247562	3300009137	Grasslands Soil	MCGRVIQSGGPLRYAIVDGMNVRDSRVHNYPPRWNAAPSQELLV
Ga0105243_130000512	3300009148	Miscanthus Rhizosphere	MCGRIIQSGGPLRYAIVDGLNARDSRVHNYPPRWNAAPSQ
Ga0075423_128324842	3300009162	Populus Rhizosphere	MCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWN
Ga0116108_10518122	3300009519	Peatland	MCGRVIQSSGPVRYAIVDGMNVRDSRVHNYPPRWNAA
Ga0116222_12778492	3300009521	Peatlands Soil	MTTMCGRIVQSSGPVRYAIIDGMSVGNSPGNNYPQRWNAGPGQ
Ga0116218_12916191	3300009522	Peatlands Soil	MCGRVIQSSGPVCYGIVERMDLRDSRAHNYPPRWNGAPSQDLL
Ga0105249_110645781	3300009553	Switchgrass Rhizosphere	MCGRIIQSSGPLRHAIVEGLNVSDSRMGNVPPRYNAAPSQELLVI
Ga0116114_10013721	3300009630	Peatland	MCGRVIQSSGPVRYAIVDGMNVRDSRVHNYPPRWNAAPSQDL
Ga0116118_11984882	3300009637	Peatland	MCGRVIQSSGPVRYAIVDGMNVRDSRVHNYPPRWNAAPS
Ga0116126_11054072	3300009640	Peatland	MCGRVIQSSGPVRYAIVDGMNVRDSRVHNYPPRWNAAPSQ
Ga0116216_104815663	3300009698	Peatlands Soil	MCGRVIQSSGPLRYAILEGMHVRDSRVHNYPSEAQS
Ga0116223_106077571	3300009839	Peatlands Soil	MCGRVIQSSGLVRYAIVDGMNVRDSRVHNYPPRWNAA
Ga0116223_108927901	3300009839	Peatlands Soil	MCGRIIQSSGPVRYAIVDGMNARDSRVHNYPPRWNAA
Ga0126380_105487441	3300010043	Tropical Forest Soil	MDDYIRAMCGRVIQSSGPLRYAMVDGMNVRDSRVHNCPPRWNAAPSQELLVI
Ga0126380_122707941	3300010043	Tropical Forest Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNVAPSQELLIIR
Ga0126384_117473311	3300010046	Tropical Forest Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRFHNYPPRWNGAPSQ
Ga0126382_113803802	3300010047	Tropical Forest Soil	MCGRVIQSSGRLRYAIVDGMDARDSRVRDYRPRWNGAP
Ga0126306_114080452	3300010166	Serpentine Soil	MCGRVIQARGPLSYAIVDGLDVRDSRLSNYPRRWNGCP
Ga0074046_106119101	3300010339	Bog Forest Soil	VIQSSGPLRYATVEGMDARHIRVHDYPPGWNAAPSQDLLVIR
Ga0126370_101770341	3300010358	Tropical Forest Soil	MCGRVIQSSGPLRYVIVDGINVRDSRVHNYPPRWNA
Ga0126381_1003587921	3300010376	Tropical Forest Soil	VIQSSGPIRYAIVDGIDVPDNRLHNYPLRWNAAPSQDLLMI
Ga0126381_1018288733	3300010376	Tropical Forest Soil	MTISDPCGRVIQSSGPLRYAAVDGMNLRDSRVHNYPP
Ga0126381_1037862142	3300010376	Tropical Forest Soil	MTISCGMCGRVIQSSRPLRYAVVDGMNVRDSRVHNYPPRW
Ga0126381_1043778582	3300010376	Tropical Forest Soil	MCGRVIQSSAPLRYAIVDGMNVRDSRLHNHPPRWNAAPS
Ga0136449_1006160091	3300010379	Peatlands Soil	MCGRIIQSSGPLQFAFVEGMNVRDRRVHNYPPRWNAAPSQD
Ga0136449_1022908762	3300010379	Peatlands Soil	MCGRLIQSSGPLRYAILEGMDVRDSRVQNYPARWNGAPSQ
Ga0136449_1035241302	3300010379	Peatlands Soil	MCGRVIQSSGPVRYAIVDGMNVRDSRLHNYPPRWNAA
Ga0134122_114656002	3300010400	Terrestrial Soil	MLTGDYIENMCGRVIQSSGPLRYAIVDGMNVRDSRMHNYPPRWNGAPS
Ga0134123_134848391	3300010403	Terrestrial Soil	MCGRVIQSSGPLRYAIIDGMNVRDSRVHNYPPRWNAAPSQELLVV
Ga0137389_112259191	3300012096	Vadose Zone Soil	MGMCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPRRWNAAPSQELLV
Ga0137383_106162552	3300012199	Vadose Zone Soil	MCGRVIQSSGPLRYAIVDGVNVRDSRVHNYPPRWNAAPSQ
Ga0137382_108939851	3300012200	Vadose Zone Soil	MCGRVIQSGGPLRYAIVDGMRDSRVHNYPPRWNAAPNQELLEPISKSFEE
Ga0137363_112089411	3300012202	Vadose Zone Soil	MDDYILPMCGRVIQSSGPLRYAIVDGMNVRDSRLHNHPPRWNAAPS
Ga0137378_103155963	3300012210	Vadose Zone Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNAAP
Ga0137385_107821161	3300012359	Vadose Zone Soil	MCGRIIQSSGPLRYAIVDGMNVREDRLHNCPPRWNGAPSQDLL
Ga0137360_118234791	3300012361	Vadose Zone Soil	MCGRVVQSSGPLRYAIVDGMNVRADRLHNYPPRWNGAPSQDLLV
Ga0137360_118293092	3300012361	Vadose Zone Soil	MCGRVIQSSGPLRYAIVDGMNVRADRLHNYPPRWNGAPSQDLLV
Ga0134087_100450921	3300012977	Grasslands Soil	MCGRVIQSGGPLRYAIVDGMNVRDSRVHNYPPRWNAAPSQEL
Ga0164307_116448992	3300012987	Soil	IQSSGPLRYAIVDGMDVRDSRVHNYPPRWNAAPSQELLVTRRNYARLP*
Ga0181530_100323437	3300014159	Bog	MCGRVIQSSGPLSYAILDGMNVRDSRVHNYPPRWNAAPSQDLLV
Ga0181538_103783071	3300014162	Bog	MCGRVIQSSGPVRYAIVDGMNVRDSRLHNYPPRWNAAPSQDLL
Ga0163163_118309772	3300014325	Switchgrass Rhizosphere	MCGRVIQSSGPLNLAIVDGMNVRDSRVHNYPPRWNAAP
Ga0182015_108280141	3300014495	Palsa	MCGRIIQSSGWLRYAIVDGMNVRDSRVHNYPPRWNAAPGQDLL
Ga0181536_103193531	3300014638	Bog	MCGRVIQSSGPLGYAIVEGMDVRDSRTHNYPPRWN
Ga0132256_1026057581	3300015372	Arabidopsis Rhizosphere	MCGRVIQSSGPLRYAIVDGINVRYSRVHNYPPRWNAAPSQE
Ga0132256_1026155551	3300015372	Arabidopsis Rhizosphere	MCGRVIQSSGPLSYAIVDGMNVRDSRVHNYPPRWNAAPNAASIPWY
Ga0132255_1040356841	3300015374	Arabidopsis Rhizosphere	MCGRVIQSTGPLRYAIIDGMNVRDSRVHNYPPRWNAAPS
Ga0182036_107121503	3300016270	Soil	MCGRVIQSSGPLRYAIVDGLNVRDSRVHNYPPRWNG
Ga0182041_103886522	3300016294	Soil	MCGRVIQSSAPLRYAIVDGMNVRDSRLHNHPPRWNAAPSQ
Ga0182041_108769221	3300016294	Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRVHNFRSGGTPRQAKNC
Ga0182041_108838152	3300016294	Soil	MCGRVIQSSGPLRYAIVDGMNARDSRVHNYPPRWNGAPSQ
Ga0182041_109825131	3300016294	Soil	MTKCSAVCGRIIQSSLSLRYAIVDGLNVRDSRVHNYPPRWNAAPSQE
Ga0182041_110752872	3300016294	Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRMHNYPPRWNGAP
Ga0182041_111584331	3300016294	Soil	MCGRVIQSSGPLRYGIVEGMDVHDSRAHNYPPRWNAAPSQDLLV
Ga0182033_108580812	3300016319	Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRMHNYPPRWNGA
Ga0182033_112315931	3300016319	Soil	MCGRVIQSSGPLRYAIVDGLNVRDSRVHNYPPRWNAADRRGLARPIAMGLI
Ga0182035_105845071	3300016341	Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNVAPSQELLVIR
Ga0182034_103573844	3300016371	Soil	MCGRVIQSSGPLRYAIVDGLNVRDSRVHNYPPRWNGAPS
Ga0182034_107247763	3300016371	Soil	MCGRVIQSSEPLHYAIVDGLNVRDSRVHNYPPRWNGAPSQELL
Ga0182034_112780752	3300016371	Soil	MCGRIIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNAAPSQELLVI
Ga0182040_105856351	3300016387	Soil	MFANSYTPAMCGRVIQSSGPLRYAIVDGMNVRDNRVHNYPPRWNAAP
Ga0182040_117730912	3300016387	Soil	MCGRIIQSTGPLRYAIVDGMNVRDSRVHNYPPRWN
Ga0182040_119623691	3300016387	Soil	MCGRVIQSSGPLRYAIVDGMSVRDSRVHNYPPRWN
Ga0182037_111482091	3300016404	Soil	MCGRVVQSSGPLRYAIVDGLDVRDSRVHNYPPRWNAAPSQD
Ga0182037_112681871	3300016404	Soil	MCGRVIQSSRPLRYAIVDGMNVRDSRFHNYPPRWNGAPSQ
Ga0182039_100707431	3300016422	Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRMHNYPPRWNG
Ga0187807_13411973	3300017926	Freshwater Sediment	MCGRVIQSSGPLSYGIVKGMDMRDSRAHNRPPRWNAAPSQDF
Ga0187775_102071551	3300017939	Tropical Peatland	MCGRVIQSSGPIRYGIVEGMDLRDSRTHNYPARWN
Ga0187819_103411741	3300017943	Freshwater Sediment	MCGRVIQSSGPLRYGIVAGMDMRDSRVHNYPPRWNGAPSQDL
Ga0187879_107251321	3300017946	Peatland	MCGRVIQSSGPLRYAILDGINVRDSRVHNYPPRWNGAPSQDLLI
Ga0187847_104921201	3300017948	Peatland	MCGRVIQSSGPLSYAILDGMNVRDSRVHNYPPRWNGAPSRDLL
Ga0187817_107526552	3300017955	Freshwater Sediment	MCGRVIQSSGPLRYGIVEGMDVSDSRAHNYPAWNAAPSEE
Ga0187817_108101231	3300017955	Freshwater Sediment	MCGRVVQSSGPLRYGIVEGMDMRDSRAHNYPPRWNAAPSQDLLV
Ga0187781_108380643	3300017972	Tropical Peatland	MCGRVIQSSGPLHYSIVAGMNVCDSRAHNYPPRWNGAP
Ga0187777_101111302	3300017974	Tropical Peatland	VCGRVIQSSGSLRSGIVAGMDVRDSRVHNYPSRWNGAPS
Ga0187777_105861882	3300017974	Tropical Peatland	IMCGRVIQSSGPLHYGIVEGMDMRDSRTHNYPPRWNVRQAKTCW
Ga0187816_104836672	3300017995	Freshwater Sediment	VIQSTGPLRYAILEGMDVRDNRRVHNYPQRWNAAPSQDLLVQSPLRRKK
Ga0187816_105117242	3300017995	Freshwater Sediment	MCGRVIQSSGPLRCGIVEGMDMRDSRAHIHPPRWNTAPSQDLL
Ga0187891_10007851	3300017996	Peatland	MCGRVIQSSGPVRYAIVDGMNVRDSRVHNYPPRWNAAPSQDLLV
Ga0187876_13091842	3300018003	Peatland	MCGRVIQSSELLRYAIVEGMDVRDTRVHNPPRWNGAPNQDLLVIRR
Ga0187805_103416981	3300018007	Freshwater Sediment	MCGRVVQSSGPLRYGIVEGMDMRDSRAHNYPPRWNAAPAR
Ga0187860_10363151	3300018014	Peatland	MCGRVIQSSGPVRYAIVDGMNVRDSRVHNYPPRWNAAPSQDLL
Ga0187872_100044161	3300018017	Peatland	VAPVRYAIVDGMNVRDSRVHNYPPRWNAAPSQDLL
Ga0187872_100745962	3300018017	Peatland	MCGRVIQSSGPLSYAILDGMNVRDSRVHNYPPRWNGAPS
Ga0187872_101790351	3300018017	Peatland	MCGRVIQSSAPVRYAIVDGMNVRDSRVHNYPPRWNAAPSQD
Ga0187874_101190492	3300018019	Peatland	MMCGRVIQSSGPVRYAIVDGMNVRDSRVHNYPPRWNAA
Ga0187766_111181361	3300018058	Tropical Peatland	MCGRIVQSSGPLGYAIVDGMSVRDSRVHNCPPRWNA
Ga0184625_105883052	3300018081	Groundwater Sediment	MCGRVIQSSGPLRYAIVDGMSVRDSRVHNYPPKWNAAPSQELLV
Ga0187772_111838562	3300018085	Tropical Peatland	MPWMCGRVIQSSGPLRYGIVEGLDARDSRVHNFPPRWNGVPSQE
Ga0190270_124135392	3300018469	Soil	MSSGPLRYAIVDGMNVRDSRVHNYPQRWNAAPSQELLVIR
Ga0190270_130269382	3300018469	Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNAAPS
Ga0210406_101216121	3300021168	Soil	MCGRVIQSSAPIRYGIVDGMNVRDSRVHNYFGGVV
Ga0210406_109974962	3300021168	Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNAAPSQELRVIRRN
Ga0210408_112063821	3300021178	Soil	MHHHIAIMCGRVVQSSGPIRYAIVDGMNVRDSRVHNYPPRWN
Ga0210394_111556332	3300021420	Soil	MCGRVIQSSAPIRYGIVDGMNVRDSRVHNYPLRWNGAPSQ
Ga0210384_115955581	3300021432	Soil	MCGRVIQSSGPLRYAFVDGMNVRDSRVSNYPPRWNA
Ga0210402_106601011	3300021478	Soil	MCGRVIQSSAPIRYAIVDGMNVRDSRVHNYPPRWNGAPSQDLP
Ga0210410_115061481	3300021479	Soil	MHGRVIQSSAPIRYAIVDGMNVRDSRVHNYPPRWN
Ga0210409_107921501	3300021559	Soil	MCGRVIQSSAPIRYAIVDGMNVRDSRVANYPPRWKGAPSPQ
Ga0210409_112895281	3300021559	Soil	MCGRVIQSSAPIRYAIVDGMNVRDSRVHNYPPRWN
Ga0213851_17562981	3300021860	Watersheds	MYGRIIQSNAPVRLAIVEGMDARDSRVHNYPPRWNGAPSQ
Ga0207663_100216253	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MCGRVIQSSGPLRYAFVEGMNVRDSRVSNYPPRWNAAP
Ga0207664_118241671	3300025929	Agricultural Soil	MCGRVIQSSGPLRYAFVEGMNVRDSRVSNYPPRWNAAPSQELL
Ga0207679_119431581	3300025945	Corn Rhizosphere	MCGRVIQSSEPLAYAIVDGMDVRDTRLHNHPPRWNAAP
Ga0207679_120944682	3300025945	Corn Rhizosphere	MCGRVIQSSAPIKYGIVDGLNVRDSRLQNYPSRWNGAP
Ga0209350_11294972	3300026277	Grasslands Soil	MCGRVIQSSGPLRYAIVDGMNVREGRLHNYPPRWNAAPS
Ga0209265_10528682	3300026308	Soil	MCGRVIQSSGPLRYAIVDGMGVREGLHNYPPRWNGAPSQDLLV
Ga0209156_101731294	3300026547	Soil	HYIRTMCGRVIQSSGPLRYSIVDGMNVRDSRVHNYPPRWMQR
Ga0207730_10017762	3300026896	Tropical Forest Soil	MTMCGRVIQSSGPLRYGIVEGMDMRDSRTHNYPPRWNARQAKTCW
Ga0209527_10206571	3300027583	Forest Soil	MCGRVIQSSGPLRYAFVDGMNVRDSRVSNYPPRWNAAP
Ga0209382_114986421	3300027909	Populus Rhizosphere	IQGSGPLRYAIVDGMNVRASRVHNYPPRWNAAPSQDLLVIR
Ga0209583_102899773	3300027910	Watersheds	MCGRVIQSSAPIRYAIVDGMNVRDSRVHNHPPRWNGAPS
Ga0209069_106929751	3300027915	Watersheds	MCGRVIQSSAPIRLAIVDGLDACDSRVHNYPPRWNGAPSQD
Ga0307322_101760692	3300028710	Soil	MCGRIIQSGGPLRYAIVDGLNARDSRVHNYPPRWNAA
Ga0307303_101728682	3300028713	Soil	MCGRIIQSGGPLRYAIVDGLNTRDSRVHNYPLRWNAAPSQEL
Ga0307317_103300231	3300028720	Soil	MCGRIIQSGGPLRYAIVDGLNARDSRVHNYPPRWNAAPSQEL
Ga0222749_100904321	3300029636	Soil	MCGRVIQSSAPIRYGIVDGMNVRDSRVHNYPPRWNG
Ga0222749_104036022	3300029636	Soil	MCGRVIQSSGPLRYAFVEGMNVPDSRVSNYPPRWNAAP
Ga0310038_103964532	3300030707	Peatlands Soil	MCGRVIQSSPLTRLAIIEGLDVRDSRVHNYPPHWNGAP
Ga0170824_1222455022	3300031231	Forest Soil	MCGRVIQSSAPIRLAIVEGMDVRDSRVHNYPPRWNGAPS
Ga0170818_1142225891	3300031474	Forest Soil	MCGRVIQSSGPRRYAIVDGMNVRDSRVHNYPPRWNGAPSQDLL
Ga0318516_100308415	3300031543	Soil	MCGRVIQSSAPLRYAIVDGMNVRDSRLHNHPPRWNAAPSQD
Ga0318555_100357176	3300031640	Soil	MCGRIIQSSAPLRYAIVDGMNVRDSRLHNHPPRWNAAPS
Ga0318560_103693061	3300031682	Soil	MCGRIIQSSAPLRYAIVDGMNVRDSRLHNHPPRWNAA
Ga0318560_104939832	3300031682	Soil	YIRPLMCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPLRWNAAPS
Ga0318560_107456401	3300031682	Soil	MCGRVIQSSGPLHYAFVEGMNVRDSRVHNYPPRWNA
Ga0310686_1043124362	3300031708	Soil	MCGRVIQSSAPIRYAIVDGMSVRDSRVANYPPRWNG
Ga0306917_113997602	3300031719	Soil	RPLMCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPLRWNAAPS
Ga0318500_106909432	3300031724	Soil	MCGRVIQSSGPLRYAIVDGLNVRDSRVHNYPPRWNAAPSQELLVIR
Ga0306918_103522023	3300031744	Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRMHNYPPRWNGAPSE
Ga0318492_104276041	3300031748	Soil	MCGRVIQSSGPLRYAIVDGLNVRDSRVHNYPPRWNAAPSQELLVI
Ga0318554_100663861	3300031765	Soil	MCGRVIQSSAPLRYAIVDGMNVRDSRLHNHPPRWN
Ga0318509_103746153	3300031768	Soil	MCGRVIQSGGPIRYGIVEGLDVHDSRVHNYPPRWNVAPSQE
Ga0318543_100120805	3300031777	Soil	MCGRIIQSSAPLRYAIVDGMNVRDSRLHNHPPRWNAAPSQD
Ga0318543_103765971	3300031777	Soil	VADDYISAMCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNAAPSQELL
Ga0318548_101960901	3300031793	Soil	MFANSYIPAMCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNAAPSQELLVI
Ga0318511_101295931	3300031845	Soil	MFANSYIPAMCGRVIQSSGALRYSIVDGMNVRDSRVHNYPPRWNAAP
Ga0306925_114995491	3300031890	Soil	VWHCTDRHIAIMCGRVIQSGGPLRYGIVEGTDMRDNRVRNY
Ga0318522_100126321	3300031894	Soil	MCGRVIQSSAPLRYAIVDGMNVRDSRLHNHPPRWNAAP
Ga0306923_118557081	3300031910	Soil	MCGRVIQSSGPLRYAIVDGLNVRDSRGHNYPPRWNAAP
Ga0306923_122498561	3300031910	Soil	RHMCGRVIQSSGPLRYAIVDGLNVRDSRVHNYPPRWNAAPSQELLVIRARVWIE
Ga0306921_112497411	3300031912	Soil	MDPYIAAMCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNAAPSQELLVTRRN
Ga0306921_114911671	3300031912	Soil	MCGRIIQSSGPIRYAIVDGMNVRDSRVHNYPPRWNAAPSQELLVI
Ga0310912_107251561	3300031941	Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNAAPSQE
Ga0310916_100702363	3300031942	Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPLRWNAAPS
Ga0310913_108298992	3300031945	Soil	MCGRITQSSGPLDYALVEGMNVRDSRFANRPPGWNGA
Ga0306926_112656751	3300031954	Soil	MCGRVIQSSGPLRYSIVDGLNVRDSRAHNYPARWNAAPSQELLIIR
Ga0306926_119723812	3300031954	Soil	MCGRVIQSSSPLNYEVVKGMNVRDSRVHNYPPRWNAAPSQEL
Ga0306926_121412102	3300031954	Soil	MPIMCGRVIQSSGPLRYGIVAGMDMRDSRVHNYPPRWNAAPS
Ga0318532_100919811	3300032051	Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRMHNYPPRWNGAPSEDLLV
Ga0318533_101541121	3300032059	Soil	MCGRVIQSSGPLRYAIVDGLNVRDSRVHNYPPRWNAPPSQ
Ga0318504_106377141	3300032063	Soil	MCGRVIQSSSPLNYEVVKGMNVRDSRVHNYPPRWNAAPS
Ga0318524_104595672	3300032067	Soil	MCGRIIQSSAPLRYAIVDGMNVRDSRLHNHPPRWNAAP
Ga0311301_124195681	3300032160	Peatlands Soil	MCGRVIQSSGPVRYAIVDGMNVRDSRLHNYPPRWNA
Ga0311301_124955082	3300032160	Peatlands Soil	VWEVIQSSGPLSYAILDGMNVPDSRVHNCPPGWNAAPSQDLLVIRRNHET
Ga0306920_1025075671	3300032261	Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRFHNYPPRWNGAPS
Ga0306920_1028634133	3300032261	Soil	MCGRVIQSSGPLRYAIVDGMSVRDSRVHNYPPRWNTAPSQQLPVIR
Ga0310914_106200111	3300033289	Soil	MCGRVIQSSGPLRYAIVDGMNVRDSRVHNYPPRWNAAPSQELLLIRRN
Ga0310914_107575222	3300033289	Soil	MCGRIIQSSGPIRYGIVDGMNVRDSRVHNYPPRWNA
Ga0310914_110349012	3300033289	Soil	MCGRVIQSSGPLRYGIVEGMDVSDGRAHNYPPRWNAAPSQDLL
Ga0314864_0058605_3_116	3300033805	Peatland	MCGRVIQSSGPLRYGIVAGMDMRDSRVHNYPPRWNGTP

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign