Metagenome / Metatranscriptome Family F028607

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F028607
Family Type	Metagenome / Metatranscriptome
Number of Sequences	191
Average Sequence Length	47 residues
Representative Sequence	LHCYILALAAERVSRDTDIWLEPPTLANIFDEEREVRGRRRAAEGP
Number of Associated Samples	111
Number of Associated Scaffolds	191

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.05 %
% of genes near scaffold ends (potentially truncated)	94.24 %
% of genes from short scaffolds (< 2000 bps)	94.24 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.021 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (25.655 % of family members)
Environment Ontology (ENVO)	Unclassified (29.319 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.644 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.95% β-sheet: 0.00% Coil/Unstructured: 54.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 191 Family Scaffolds
PF10134	RPA	4.19
PF04909	Amidohydro_2	2.62
PF01656	CbiA	2.09
PF07929	PRiA4_ORF3	2.09
PF13359	DDE_Tnp_4	2.09
PF01436	NHL	1.57
PF00847	AP2	1.57
PF10431	ClpB_D2-small	1.57
PF12759	HTH_Tnp_IS1	1.57
PF13614	AAA_31	1.05
PF00216	Bac_DNA_binding	1.05
PF06689	zf-C4_ClpX	1.05
PF00072	Response_reg	1.05
PF07724	AAA_2	0.52
PF01909	NTP_transf_2	0.52
PF00872	Transposase_mut	0.52
PF08031	BBE	0.52
PF03328	HpcH_HpaI	0.52
PF13613	HTH_Tnp_4	0.52
PF13546	DDE_5	0.52
PF13424	TPR_12	0.52
PF12904	Collagen_bind_2	0.52
PF03357	Snf7	0.52
PF13340	DUF4096	0.52
PF03400	DDE_Tnp_IS1	0.52
PF00561	Abhydrolase_1	0.52
PF00012	HSP70	0.52
PF02371	Transposase_20	0.52
PF04986	Y2_Tnp	0.52
PF13565	HTH_32	0.52
PF14319	Zn_Tnp_IS91	0.52
PF02922	CBM_48	0.52
PF00440	TetR_N	0.52
PF05598	DUF772	0.52
PF04075	F420H2_quin_red	0.52
PF13276	HTH_21	0.52
PF01724	DUF29	0.52
PF00496	SBP_bac_5	0.52
PF04255	DUF433	0.52

COG ID	Name	Functional Category	% Frequency in 191 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	1.05
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.52
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.52
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.52
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	0.52
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.52
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.52
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.52
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.52
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.52
COG5491	Archaeal cell division protein CdvB, Snf7/Vps24/ESCRT-III family	Cell cycle control, cell division, chromosome partitioning [D]	0.52

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.02 %
All Organisms	root	All Organisms	43.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.02 %
cellular organisms	root	All Organisms → cellular organisms	43.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.46 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.38 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	7.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.57 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.57 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.05 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.52 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.52 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.02 %
Nitrospinae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae	6.81 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.66 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.62 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.09 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.57 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.57 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.57 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	1.05 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.05 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.52 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.52 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.52 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.52 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.02 %
unclassified Nitrospinota	no rank	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota	6.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.66 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.09 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.09 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1.05 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.05 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.52 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.52 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.52 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.52 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.52 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.52 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	0.52 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.52 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.52 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.52 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.02 %
Nitrospinae bacterium SCGC AAA008-D05	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	6.81 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.66 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	2.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.09 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.05 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1.05 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.52 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.52 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.52 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.52 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	0.52 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.52 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.52 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.52 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.52 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.52 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.02 %
Nitrospinae bacterium SCGC AAA008-D05	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	6.81 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.09 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.57 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.05 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1.05 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.52 %
SAR202 cluster bacterium Io17-Chloro-G9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium Io17-Chloro-G9	0.52 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.52 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.52 %
Nitrosococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus	0.52 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	0.52 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.52 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.52 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.52 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.52 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.52 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.02 %
Nitrospinae bacterium SCGC AAA008-D05	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	6.81 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.09 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.57 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.05 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1.05 %
Nitrosococcus halophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus → Nitrosococcus halophilus	0.52 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.52 %
SAR202 cluster bacterium Io17-Chloro-G9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium Io17-Chloro-G9	0.52 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.52 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.52 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	0.52 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.52 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.52 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.52 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.52 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.52 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.02 %
Nitrospinae bacterium SCGC AAA008-D05	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	6.81 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.09 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.57 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.05 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1.05 %
Nitrosococcus halophilus Nc 4	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus → Nitrosococcus halophilus → Nitrosococcus halophilus Nc 4	0.52 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.52 %
SAR202 cluster bacterium Io17-Chloro-G9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium Io17-Chloro-G9	0.52 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.52 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.52 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	0.52 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.52 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.52 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.52 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.52 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.52 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.52 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_112332408	Not Available	635	Open in IMG/M
3300004633\|Ga0066395_10773648	Not Available	575	Open in IMG/M
3300005171\|Ga0066677_10033803	All Organisms → cellular organisms → Bacteria	2468	Open in IMG/M
3300005175\|Ga0066673_10856173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	518	Open in IMG/M
3300005187\|Ga0066675_10033094	All Organisms → cellular organisms → Bacteria	3052	Open in IMG/M
3300005332\|Ga0066388_100687074	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1632	Open in IMG/M
3300005337\|Ga0070682_101880416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	524	Open in IMG/M
3300005471\|Ga0070698_101715389	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	581	Open in IMG/M
3300005554\|Ga0066661_10511824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724	Open in IMG/M
3300005576\|Ga0066708_10262145	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300005713\|Ga0066905_100182457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1550	Open in IMG/M
3300005764\|Ga0066903_103128947	Not Available	896	Open in IMG/M
3300005764\|Ga0066903_108042366	Not Available	541	Open in IMG/M
3300005937\|Ga0081455_10369523	Not Available	1006	Open in IMG/M
3300005985\|Ga0081539_10436129	Not Available	543	Open in IMG/M
3300006049\|Ga0075417_10513953	Not Available	603	Open in IMG/M
3300006173\|Ga0070716_100096690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1801	Open in IMG/M
3300006844\|Ga0075428_100631914	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1142	Open in IMG/M
3300006844\|Ga0075428_101737153	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	650	Open in IMG/M
3300006844\|Ga0075428_101775351	Not Available	642	Open in IMG/M
3300006845\|Ga0075421_100250063	Not Available	2173	Open in IMG/M
3300006845\|Ga0075421_102080649	Not Available	602	Open in IMG/M
3300006846\|Ga0075430_101084685	Not Available	659	Open in IMG/M
3300006846\|Ga0075430_101157991	Not Available	637	Open in IMG/M
3300006846\|Ga0075430_101270817	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300006847\|Ga0075431_100210680	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300006847\|Ga0075431_101861143	Not Available	558	Open in IMG/M
3300006847\|Ga0075431_101974320	Not Available	539	Open in IMG/M
3300006853\|Ga0075420_101333578	Not Available	616	Open in IMG/M
3300006854\|Ga0075425_100496212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1406	Open in IMG/M
3300006854\|Ga0075425_101060336	Not Available	924	Open in IMG/M
3300006880\|Ga0075429_100301831	Not Available	1402	Open in IMG/M
3300006880\|Ga0075429_100642647	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	929	Open in IMG/M
3300006880\|Ga0075429_100665012	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300006880\|Ga0075429_100923537	All Organisms → cellular organisms → Bacteria → Proteobacteria	764	Open in IMG/M
3300006880\|Ga0075429_101901498	Not Available	516	Open in IMG/M
3300006904\|Ga0075424_101810978	All Organisms → cellular organisms → Bacteria → Terrabacteria group	646	Open in IMG/M
3300006969\|Ga0075419_11246527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300007076\|Ga0075435_101144220	Not Available	680	Open in IMG/M
3300007255\|Ga0099791_10296652	Not Available	770	Open in IMG/M
3300009090\|Ga0099827_10112917	Not Available	2177	Open in IMG/M
3300009090\|Ga0099827_10922358	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	757	Open in IMG/M
3300009094\|Ga0111539_10903548	Not Available	1027	Open in IMG/M
3300009094\|Ga0111539_11046714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	949	Open in IMG/M
3300009100\|Ga0075418_10179628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2253	Open in IMG/M
3300009137\|Ga0066709_104085226	Not Available	531	Open in IMG/M
3300009143\|Ga0099792_10652193	Not Available	676	Open in IMG/M
3300009147\|Ga0114129_10034887	All Organisms → cellular organisms → Bacteria	7106	Open in IMG/M
3300009147\|Ga0114129_10447066	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1695	Open in IMG/M
3300009147\|Ga0114129_11231204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	931	Open in IMG/M
3300009147\|Ga0114129_11505485	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	827	Open in IMG/M
3300009147\|Ga0114129_12898866	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300009147\|Ga0114129_13268665	Not Available	525	Open in IMG/M
3300009156\|Ga0111538_11687810	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300009792\|Ga0126374_10995299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300009792\|Ga0126374_11007855	Not Available	654	Open in IMG/M
3300009792\|Ga0126374_11275869	Not Available	592	Open in IMG/M
3300009821\|Ga0105064_1058062	Not Available	753	Open in IMG/M
3300010041\|Ga0126312_11189083	Not Available	562	Open in IMG/M
3300010043\|Ga0126380_10303329	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300010043\|Ga0126380_10968554	Not Available	713	Open in IMG/M
3300010046\|Ga0126384_10445517	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300010046\|Ga0126384_10539851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1011	Open in IMG/M
3300010046\|Ga0126384_10880471	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300010046\|Ga0126384_11007515	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	759	Open in IMG/M
3300010046\|Ga0126384_11093064	Not Available	731	Open in IMG/M
3300010046\|Ga0126384_11430909	Not Available	645	Open in IMG/M
3300010046\|Ga0126384_12482697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300010047\|Ga0126382_10660790	Not Available	870	Open in IMG/M
3300010047\|Ga0126382_10707453	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300010047\|Ga0126382_11156270	Not Available	690	Open in IMG/M
3300010358\|Ga0126370_10146948	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1713	Open in IMG/M
3300010358\|Ga0126370_11031372	Not Available	753	Open in IMG/M
3300010358\|Ga0126370_11123406	Not Available	726	Open in IMG/M
3300010358\|Ga0126370_11467072	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	647	Open in IMG/M
3300010359\|Ga0126376_11283583	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300010359\|Ga0126376_11299548	Not Available	747	Open in IMG/M
3300010360\|Ga0126372_10131438	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1959	Open in IMG/M
3300010360\|Ga0126372_10471821	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1170	Open in IMG/M
3300010360\|Ga0126372_12005506	Not Available	625	Open in IMG/M
3300010360\|Ga0126372_13173110	Not Available	511	Open in IMG/M
3300010362\|Ga0126377_10584026	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1160	Open in IMG/M
3300010362\|Ga0126377_11058605	Not Available	879	Open in IMG/M
3300010366\|Ga0126379_10760124	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1066	Open in IMG/M
3300010366\|Ga0126379_12705121	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300010366\|Ga0126379_13710588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
3300010398\|Ga0126383_10752413	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300010398\|Ga0126383_11211905	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300010398\|Ga0126383_12177512	Not Available	641	Open in IMG/M
3300010398\|Ga0126383_12488242	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300010398\|Ga0126383_12816033	Not Available	568	Open in IMG/M
3300010398\|Ga0126383_13520238	Not Available	511	Open in IMG/M
3300010398\|Ga0126383_13641585	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300010863\|Ga0124850_1045039	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300011269\|Ga0137392_10457171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1060	Open in IMG/M
3300012189\|Ga0137388_10318138	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1430	Open in IMG/M
3300012189\|Ga0137388_11936509	Not Available	519	Open in IMG/M
3300012201\|Ga0137365_10174481	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300012201\|Ga0137365_10907517	Not Available	642	Open in IMG/M
3300012202\|Ga0137363_10762805	Not Available	820	Open in IMG/M
3300012203\|Ga0137399_10114482	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2109	Open in IMG/M
3300012203\|Ga0137399_10605134	Not Available	921	Open in IMG/M
3300012206\|Ga0137380_10705130	Not Available	876	Open in IMG/M
3300012207\|Ga0137381_10621350	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	941	Open in IMG/M
3300012207\|Ga0137381_11578488	Not Available	547	Open in IMG/M
3300012209\|Ga0137379_10296360	Not Available	1528	Open in IMG/M
3300012209\|Ga0137379_10515593	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300012354\|Ga0137366_10258315	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300012354\|Ga0137366_11077755	Not Available	554	Open in IMG/M
3300012356\|Ga0137371_11370713	Not Available	520	Open in IMG/M
3300012357\|Ga0137384_10643943	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300012359\|Ga0137385_10473312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1062	Open in IMG/M
3300012361\|Ga0137360_10555031	Not Available	981	Open in IMG/M
3300012362\|Ga0137361_10847821	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300012362\|Ga0137361_10901506	Not Available	802	Open in IMG/M
3300012385\|Ga0134023_1265456	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300012923\|Ga0137359_10196737	Not Available	1800	Open in IMG/M
3300012925\|Ga0137419_10661557	Not Available	844	Open in IMG/M
3300012925\|Ga0137419_11074063	Not Available	670	Open in IMG/M
3300012927\|Ga0137416_10570931	Not Available	982	Open in IMG/M
3300012930\|Ga0137407_10295036	Not Available	1481	Open in IMG/M
3300012930\|Ga0137407_11758100	Not Available	591	Open in IMG/M
3300012930\|Ga0137407_11892514	Not Available	569	Open in IMG/M
3300012944\|Ga0137410_11525306	Not Available	584	Open in IMG/M
3300012944\|Ga0137410_11890219	Not Available	529	Open in IMG/M
3300012948\|Ga0126375_10197211	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300012971\|Ga0126369_10052018	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	3505	Open in IMG/M
3300012971\|Ga0126369_10076427	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2955	Open in IMG/M
3300012971\|Ga0126369_10185881	Not Available	1990	Open in IMG/M
3300012971\|Ga0126369_10987172	Not Available	929	Open in IMG/M
3300012971\|Ga0126369_11054863	Not Available	901	Open in IMG/M
3300012971\|Ga0126369_11126969	Not Available	874	Open in IMG/M
3300012971\|Ga0126369_11393393	Not Available	791	Open in IMG/M
3300012971\|Ga0126369_11495937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium Io17-Chloro-G9	765	Open in IMG/M
3300012971\|Ga0126369_12182995	Not Available	641	Open in IMG/M
3300013306\|Ga0163162_13327808	Not Available	514	Open in IMG/M
3300014487\|Ga0182000_10301468	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300014884\|Ga0180104_1023963	Not Available	1530	Open in IMG/M
3300015264\|Ga0137403_10721771	Not Available	856	Open in IMG/M
3300015374\|Ga0132255_100024098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7563	Open in IMG/M
3300016294\|Ga0182041_10389843	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1182	Open in IMG/M
3300016294\|Ga0182041_10468154	Not Available	1086	Open in IMG/M
3300016319\|Ga0182033_10488005	Not Available	1057	Open in IMG/M
3300016319\|Ga0182033_10876957	Not Available	794	Open in IMG/M
3300016341\|Ga0182035_11903382	Not Available	540	Open in IMG/M
3300016357\|Ga0182032_10110931	Not Available	1958	Open in IMG/M
3300016371\|Ga0182034_11039831	Not Available	708	Open in IMG/M
3300017656\|Ga0134112_10152638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	889	Open in IMG/M
3300017792\|Ga0163161_10813744	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300017792\|Ga0163161_11769468	Not Available	549	Open in IMG/M
3300017792\|Ga0163161_11923156	Not Available	526	Open in IMG/M
3300019279\|Ga0184642_1279824	Not Available	530	Open in IMG/M
3300021560\|Ga0126371_11386943	Not Available	834	Open in IMG/M
3300021560\|Ga0126371_12592741	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	614	Open in IMG/M
3300025922\|Ga0207646_10391501	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1255	Open in IMG/M
3300025922\|Ga0207646_10623288	Not Available	967	Open in IMG/M
3300025961\|Ga0207712_11998652	Not Available	519	Open in IMG/M
3300026118\|Ga0207675_100553464	Not Available	1150	Open in IMG/M
3300026118\|Ga0207675_101762456	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300026301\|Ga0209238_1279068	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300027655\|Ga0209388_1191268	Not Available	569	Open in IMG/M
3300027846\|Ga0209180_10185179	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1201	Open in IMG/M
3300027875\|Ga0209283_10273634	Not Available	1117	Open in IMG/M
3300027880\|Ga0209481_10347452	Not Available	756	Open in IMG/M
3300027882\|Ga0209590_10093981	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300027882\|Ga0209590_10110742	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	1655	Open in IMG/M
3300027903\|Ga0209488_10047443	All Organisms → cellular organisms → Bacteria	3158	Open in IMG/M
3300027909\|Ga0209382_11946141	Not Available	566	Open in IMG/M
3300028828\|Ga0307312_10837513	Not Available	610	Open in IMG/M
3300030783\|Ga0102752_1514652	Not Available	523	Open in IMG/M
3300031744\|Ga0306918_11184153	Not Available	590	Open in IMG/M
3300031744\|Ga0306918_11419978	Not Available	532	Open in IMG/M
3300031782\|Ga0318552_10462038	Not Available	648	Open in IMG/M
3300031879\|Ga0306919_11167329	Not Available	586	Open in IMG/M
3300031890\|Ga0306925_10730346	Not Available	1034	Open in IMG/M
3300031890\|Ga0306925_11367025	Not Available	700	Open in IMG/M
3300031893\|Ga0318536_10711393	Not Available	500	Open in IMG/M
3300031910\|Ga0306923_11301238	Not Available	771	Open in IMG/M
3300031941\|Ga0310912_11175476	Not Available	584	Open in IMG/M
3300031941\|Ga0310912_11350307	Not Available	539	Open in IMG/M
3300031945\|Ga0310913_10196437	Not Available	1408	Open in IMG/M
3300031946\|Ga0310910_10297651	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300031946\|Ga0310910_11268802	Not Available	570	Open in IMG/M
3300031946\|Ga0310910_11397365	Not Available	539	Open in IMG/M
3300031947\|Ga0310909_10893817	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05	730	Open in IMG/M
3300031954\|Ga0306926_11463458	Not Available	790	Open in IMG/M
3300032001\|Ga0306922_11814442	Not Available	600	Open in IMG/M
3300032013\|Ga0310906_10894982	Not Available	633	Open in IMG/M
3300032076\|Ga0306924_10504726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus → Nitrosococcus halophilus → Nitrosococcus halophilus Nc 4	1377	Open in IMG/M
3300032076\|Ga0306924_10559180	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300034676\|Ga0314801_150455	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.44%
Host-Associated	Host-Associated	23.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.39%
Plants	Host-Associated → Plants	23.56%
Aquatic	Environmental → Aquatic	1.05%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.71%
Freshwater	Environmental → Aquatic → Freshwater	0.52%
Sediment	Environmental → Aquatic → Sediment	0.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.85%
Loam	Environmental → Terrestrial → Soil → Loam	6.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.19%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.52%
Sand	Environmental → Terrestrial → Soil → Sand	0.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.05%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.05%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.52%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.52%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	18.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.05%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.05%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.05%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.52%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.52%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.52%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.52%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.52%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012385	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030783	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 3C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1123324082	3300000956	Soil	LHCYILALAAERVSRDTDMWLEPPTLVNLFDEKREVRGRRRAADGS*
Ga0066395_107736481	3300004633	Tropical Forest Soil	LHCYILALAAERVSRDTEIWLEPPTLANLFDAEREVRGQRRSAEGL*
Ga0066677_100338035	3300005171	Soil	GTLMSHLHCYILALAAERVSRDTDIWLEPPTLANLFDAEREVRGQRRAAEGP*
Ga0066673_108561731	3300005175	Soil	VSTLMSHLHCYMLALAAERVSRDTEIWLEPPTLANLFDEAREVQARRRAAEDS*
Ga0066675_100330944	3300005187	Soil	LEVAVSTLMSHLHCYILALAAERVSRDTDIWVEPPTLANLFDEERAVQAKRRSAEGA*
Ga0066388_1006870742	3300005332	Tropical Forest Soil	CYIMALAAERVSRDTDIWLEPPTLANLFDEQREVRGRRRAAEEP*
Ga0070682_1018804162	3300005337	Corn Rhizosphere	CYILALAAERVSRGTDIWLEPPTLANLFDEEREVRGQRRAAEEP*
Ga0070698_1017153892	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ILALAAERVSRDTDIWVEPPTLANLFDAEREVRGWRRFTEGP*
Ga0066661_105118241	3300005554	Soil	MLALAAERVSRDTEIWLEPPTLANLFDEAREVQARRRAAEDS*
Ga0066708_102621451	3300005576	Soil	VSRDTDIWLEPPTLANLFDAEREVRGQRRAAEGP*
Ga0066905_1001824572	3300005713	Tropical Forest Soil	MRHLHCYILALAAERVSRDTEIWLEPPTLANIFDGEREVRARRHAAEDS*
Ga0066903_1031289471	3300005764	Tropical Forest Soil	HLHCYILALAAERVSRDTDMWLEPPTLANLFDEAREVRGRRRSTEGP*
Ga0066903_1080423662	3300005764	Tropical Forest Soil	NTLMRYLHCYILALAAERVSRDTEIWLEPPTLANLFDEEREVRGRRRCADGS*
Ga0081455_103695232	3300005937	Tabebuia Heterophylla Rhizosphere	MSHLHCYILALAAERVSRGTDIWLEPPTLANIFDEEREVRGRRRAAEEP*
Ga0081539_104361292	3300005985	Tabebuia Heterophylla Rhizosphere	VGTLMSHLHCYILALAAERVSRDTEIWLEPPTLVNLFDEEREVRARRRAADGS*
Ga0075417_105139532	3300006049	Populus Rhizosphere	HCYILALAAERVSRDTDIWVEPPTLTNLFDEKREVRGRRRAADGS*
Ga0070716_1000966901	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VSRDTDIWLEPPTLSNLFDEEREVRARRRAVEEC*
Ga0075428_1006319141	3300006844	Populus Rhizosphere	LMSHLHCYILALAAERVSRGTDIWLEPPTLANIFDEEREVRGRRRAAEGP*
Ga0075428_1017371532	3300006844	Populus Rhizosphere	LMSHLHCYILALAAERVSRGTDIWLEPPTLANIFDEEREGRGRRRAAEGP*
Ga0075428_1017753513	3300006844	Populus Rhizosphere	RVSRDTEIWLEPPTLANLFDAEREVRGQRRSAEGP*
Ga0075421_1002500633	3300006845	Populus Rhizosphere	STLMSHLHCYILALAAERVSRDTDIWVEPPTLTNLFDEKREVRGRRRSAEGS*
Ga0075421_1020806491	3300006845	Populus Rhizosphere	HCYILALAAERVSRDTEIWLEPPTLANLFDAEREVRGQRRTAEGL*
Ga0075430_1010846851	3300006846	Populus Rhizosphere	ALAAERVSRDTEIWLEPPTLANLFDAEREVRGQRRSAEGP*
Ga0075430_1011579912	3300006846	Populus Rhizosphere	SHLHCYILALAAERVSRDTEIWLEPPTLANIFDEEREVRGQRRTAEGL*
Ga0075430_1012708172	3300006846	Populus Rhizosphere	LMSHLHCYILALAAERVSRDTEIWLEPPTLANLFDKEREVRARRHAAEEP*
Ga0075431_1002106806	3300006847	Populus Rhizosphere	QLDVAVGTLMSHLHCYMLALAAERVSRNTEIWVEPPTLANIFEAEREVRARRRSGEGA*
Ga0075431_1018611433	3300006847	Populus Rhizosphere	ALAAERVSRDTEIWLEPPTLANLFDEEREVRGRRRAVEEP*
Ga0075431_1019743202	3300006847	Populus Rhizosphere	VAVSTLMSHLHCYILALAAERVSRDTDMWLEPPTLANLFDEQREVRARRRSVEGA*
Ga0075420_1013335781	3300006853	Populus Rhizosphere	MSHLHCYMLALAAERVSRNTEIWVEPPTLANIFEAEREVRARRRSGEGA*
Ga0075425_1004962123	3300006854	Populus Rhizosphere	QLEVAVSTLMSHLHCYILALAAERVSRDTEIWVEPPTLANIFDEAREVRGRRRAAEGP*
Ga0075425_1010603361	3300006854	Populus Rhizosphere	LHCYILALAAERVSRDTDIWLEPPTLANLFDEQREVRGQRRAAEGP*
Ga0075429_1003018311	3300006880	Populus Rhizosphere	HCYILALAAERVSRDTDIWVEPPTLTNLFDEKREVRGRRRSAEGS*
Ga0075429_1006426473	3300006880	Populus Rhizosphere	HLHCYILALAAERVSRDTDIWLEPPTLANLFDEEREVRGRRRFTEGP*
Ga0075429_1006650123	3300006880	Populus Rhizosphere	HLHCYILALAAERVSRDTDIWLEPPTLANLFDAEREVRGQRRAAEGP*
Ga0075429_1009235372	3300006880	Populus Rhizosphere	VSTLMSHLHCYILALAAERVSRDTEIWLEPPTLVNLFDEARAVHARRRSVEGA*
Ga0075429_1019014981	3300006880	Populus Rhizosphere	ALAAERVSRDTEIWLEPPTLANIFDEEREVRGQRRTAEGL*
Ga0075424_1018109783	3300006904	Populus Rhizosphere	YILALAAERVSRDTEIWLEPPTLANLFDEEREVRGRRRSTEGS*
Ga0075419_112465272	3300006969	Populus Rhizosphere	ALAAERVSRDTEIWVEPPTLANIFDEAREVRGRRRAAEGP*
Ga0075435_1011442203	3300007076	Populus Rhizosphere	LALAAERVSRDTDIWLEPPTLANLFDAEREVRGQRRAAEGP*
Ga0099791_102966521	3300007255	Vadose Zone Soil	ESVSRRTDIWVEPPTLANIFDEEREVRGRRRPAEGS*
Ga0099827_101129171	3300009090	Vadose Zone Soil	AEMEIAATTLMSHLHCSILALAAERVSRGTDIWVEPPTLATIFDEEREVRGRRRSAEGP*
Ga0099827_109223582	3300009090	Vadose Zone Soil	LEVAASTLMSHLHCYILALSAERVSRDTDIRVEPPTLVNIFDEEREVRARRRSAEGS*
Ga0111539_109035481	3300009094	Populus Rhizosphere	ILALAAERVSRDTDIWLEPPTLAHLFDAEREVRGQRRCTEEP*
Ga0111539_110467141	3300009094	Populus Rhizosphere	ALAAERVSRDTDIWLEPPTLANIFDEQREVRGRRRAAEGS*
Ga0075418_101796284	3300009100	Populus Rhizosphere	LMSHLHCYILALAAERVSRDTDIWLEPPTLANLFDAEREVRGRRRAAEGP*
Ga0066709_1040852261	3300009137	Grasslands Soil	ILALSAERVSRDTDIWVEPPALATIFDEEREVRGRRRSAEGP*
Ga0099792_106521932	3300009143	Vadose Zone Soil	CSILALAAERVSRDTDIWVEPPTLATIFDEEREVRGRRRSAEGP*
Ga0114129_100348871	3300009147	Populus Rhizosphere	HLHCYILALAAERVSRDTDLWLEPPTLANLFDEARAVHARRRSVDDA*
Ga0114129_104470661	3300009147	Populus Rhizosphere	ILALAAERVSRDTDIWLEPPTLANLFDAEREVRGRRRAAEGP*
Ga0114129_112312041	3300009147	Populus Rhizosphere	LALAAERVSRDTDIWLEPPTLANLFDEARAVQARRRSMEGA*
Ga0114129_115054852	3300009147	Populus Rhizosphere	HLHCYILALAAERVSRDTEIWLEPPTLANLFDEEREVRAKRHAAEDS*
Ga0114129_128988662	3300009147	Populus Rhizosphere	LALAAERVSRDTEIWLEPPTLANLFDEAREVQARRRAAEDS*
Ga0114129_132686651	3300009147	Populus Rhizosphere	VSTLMSHLHCYILALAAERVSRGTDIWLEPPTLANIFDEEREVRGRRRAAEGP*
Ga0111538_116878101	3300009156	Populus Rhizosphere	LAAERVSRDTDIWLEPPTLANLFDAEREVRGRRRAAEGP*
Ga0126374_109952991	3300009792	Tropical Forest Soil	LALAAERVSRGTDIWLEPPTLANLFDEEREVRGRRRAAEGP*
Ga0126374_110078552	3300009792	Tropical Forest Soil	HLHCYILALAAERVSRDTEIWLEPPTLANLFDEEREVRARRHSTEES*
Ga0126374_112758691	3300009792	Tropical Forest Soil	ERVSRDTEIWLEPPTLANLFDEAREVRGRRRSTEGP*
Ga0105064_10580622	3300009821	Groundwater Sand	SHLHCYILALSAERVSRDTDIWVEPPTLANMFDEEREVRARRRSAEGS*
Ga0126312_111890832	3300010041	Serpentine Soil	ALAAERVSRDTDTWLEPPTLANIFDEQREVRGRRRSTEGP*
Ga0126380_103033291	3300010043	Tropical Forest Soil	HPEQLDVAVGTLMRHLHCSIMALAAARVSRDTEIWLEPPTLANLFDAEREVRARRHAAEES*
Ga0126380_109685543	3300010043	Tropical Forest Soil	LALAAERVSRDTDIWLEPPTLANLFDEEREVRARRHAAEES*
Ga0126384_104455173	3300010046	Tropical Forest Soil	ILALAAERVSRDTDIWLEPPTLANLFDEAREVRARRHAAEES*
Ga0126384_105398512	3300010046	Tropical Forest Soil	MRHLHCYILALAAERVSRDTEIWLEPPTLANLFDAEREVRGQRRSAEGL*
Ga0126384_108804712	3300010046	Tropical Forest Soil	YILALAAERVSRDTEIWLEPPTLANLFDAEREVRARRHAAEES*
Ga0126384_110075151	3300010046	Tropical Forest Soil	STLMRHLHCYILALAAERVSRDTEIWLEPLTLANLFDEEREVRGRRRVAEGP*
Ga0126384_110930642	3300010046	Tropical Forest Soil	YILALAAERVSRDTDMWLEPPTLANLFDEAREVRGRRRSTEGP*
Ga0126384_114309092	3300010046	Tropical Forest Soil	VSTLMSHLHCYILALAAERVSRDTAIWLEPPTLANLFDEEREVHARRRSVEGA*
Ga0126384_124826972	3300010046	Tropical Forest Soil	ERVSRATEIWLEPPTLANLFDAEREVQARRRAAEDS*
Ga0126382_106607901	3300010047	Tropical Forest Soil	LALAAERVSRDTDIWLEPPTLANLFDAEREVRGQRRSAEGL*
Ga0126382_107074533	3300010047	Tropical Forest Soil	STLMRHLHCYILALAAERVSRDTALWLEPPTLANLFDEEREVQGRRRSAEES*
Ga0126382_111562702	3300010047	Tropical Forest Soil	LEVAVSTLMSHLHCYILALAAERVSRDTEIWLEPPTLANLFDEEREVRARRHAAEES*
Ga0126370_101469481	3300010358	Tropical Forest Soil	LHCYILALAAERVSRDTEFWLEPPTLANLFDEEREVRGRRRAAEGP*
Ga0126370_110313721	3300010358	Tropical Forest Soil	MALAAERVSRDTDIWLEPPTLANLFDAEREVRGLRRSADGS*
Ga0126370_111234061	3300010358	Tropical Forest Soil	MNHLHCYILVLAAERVSRDTDIWLEPPTLANLFDEEREVRARRHAAEES*
Ga0126370_114670721	3300010358	Tropical Forest Soil	ILALAAERVSRDTEIWLEPPTLANLFDAEREVRGQRRSPEEP*
Ga0126376_112835831	3300010359	Tropical Forest Soil	VAVSTLMNHLHCYILALAAERVSRDTDIWLEPPTLANLFDEEREVRARRHAAEES*
Ga0126376_112995481	3300010359	Tropical Forest Soil	LHCYIVALAAERVSRDTEIWVEPPTQANILDEEREVRARRRSSEGS*
Ga0126372_101314382	3300010360	Tropical Forest Soil	VSRDTDIWLEPPTLANLFDEEREVRGRRRAAEGP*
Ga0126372_104718212	3300010360	Tropical Forest Soil	MSHLHCYILALAAERVSRDTDIWLEPPTLVNLFDEEREVRGQRRAAEGP*
Ga0126372_120055061	3300010360	Tropical Forest Soil	GTLMSHLHCYSLALAAERVSRDTEIWLEPPTLANLFDEQREVRGQRRAAEEP*
Ga0126372_131731102	3300010360	Tropical Forest Soil	ALAAERVSRDTEIWLEPPTLANLFDEEREVRARRHAAEES*
Ga0126377_105840261	3300010362	Tropical Forest Soil	TLMSHFHCYILALAAERVSRDTDILVEPPTLANIFDEEREIRGRRRAAEGS*
Ga0126377_110586051	3300010362	Tropical Forest Soil	HLHCYMLALAAERVSRDTDIWLEPPTLANLFDEQREVRGRRRAAEGS*
Ga0126379_107601242	3300010366	Tropical Forest Soil	AERVSRDTDIWLEPPTLANLFDEEREVRGLRRSADGS*
Ga0126379_127051213	3300010366	Tropical Forest Soil	AERVSRDTDIWLEPPTLANLFDEEREVRGQRRAAEGP*
Ga0126379_137105881	3300010366	Tropical Forest Soil	VAVSTLMNHLHCYILALAAERVSRDTEIWLEPPTLANLFDEEREVRARRHAAEES*
Ga0126383_107524132	3300010398	Tropical Forest Soil	ITCITLPAAERVSRDTDMWLEPPTLVNLLDEKREVRGRRRAADGS*
Ga0126383_112119051	3300010398	Tropical Forest Soil	VGTLMSHLHCYILALAAERVSRDTDMWLEPPTLVNLFDEERKVRGRRRSAEGS*
Ga0126383_121775122	3300010398	Tropical Forest Soil	HLHCYILALAAERVSRDTDIWVEPPTLANLFDEEREVRGRRRFTEGP*
Ga0126383_124882422	3300010398	Tropical Forest Soil	MSHLHCYMLALAAERVSRDTEIWLEPPTLANLFDGEREVRTRRRSAEES*
Ga0126383_128160332	3300010398	Tropical Forest Soil	VSRDTEIWLEPPTLANLFDEEREVRARRHAAEES*
Ga0126383_135202381	3300010398	Tropical Forest Soil	ILALAAERVSRDTEIWLEPPTLANLFDAEREVRGWRRCTEGP*
Ga0126383_136415852	3300010398	Tropical Forest Soil	ERVSRDTEIWLEPPTLANLFDEAREVQARRRAAEDS*
Ga0124850_10450391	3300010863	Tropical Forest Soil	PPPLLYSGHCYILALAAERVSRDTDIWLEPPTLANLFDEEREVRGQRRAAEGP*
Ga0137392_104571711	3300011269	Vadose Zone Soil	VHLLSSTLLRSIHAYILALSAERVSRHTDIWVEPPTLENIFDEEREVRALRRSSEGS*
Ga0137388_103181381	3300012189	Vadose Zone Soil	HPAQLEVAISTLMRHLHCYILALAAERVSRDTDIWLEPPTLANLFDGVREVRARRHAAEES*
Ga0137388_119365092	3300012189	Vadose Zone Soil	ILALAAESVSRRTDIWVEPPTLANIFDEEREVRGRRRSTEGP*
Ga0137365_101744811	3300012201	Vadose Zone Soil	DQLEVAVSTLMRHLHCYILALSAERVSRDTDIWVEPPTLANIFDEEREVRGRRRSAEGP*
Ga0137365_109075172	3300012201	Vadose Zone Soil	MSHLHCYILALAAERVSRDTDIWLEPPTLANIFDGEREVRARRHAAEDS*
Ga0137363_107628051	3300012202	Vadose Zone Soil	LALAAERVSRDTDTWLEPPTLANIFDEEREVRGRRRSTEGP*
Ga0137399_101144822	3300012203	Vadose Zone Soil	LALAAERVSRDTDIWLEPPTLANLFDEARAVHARRRSVEGA*
Ga0137399_106051341	3300012203	Vadose Zone Soil	MSHLHCYILALAAERVSRDTDIWLEPPTLANLFDEARAVQARRRSVEGA*
Ga0137380_107051302	3300012206	Vadose Zone Soil	VSTLMSHLHCYILALAAERVSRDTEIWLEPPTLANLFDEAREVRARRHAAEES*
Ga0137381_106213501	3300012207	Vadose Zone Soil	HLHCYILALAAERVSRDTDVWIEPPTLANIFDEEREVRGRRRVAEGP*
Ga0137381_115784881	3300012207	Vadose Zone Soil	DVAVSTLMSHLHCSILALAAERVSRDTGIWVEPPALANLFDEARAVHAKRRSVEGA*
Ga0137379_102963601	3300012209	Vadose Zone Soil	AERVSRDTDIWVEPPTLANIFDEEREVRGRRRSAEGP*
Ga0137379_105155932	3300012209	Vadose Zone Soil	ILALAAERVSRDTDIWVEPPTLANLFDEARAVHAKRRSVEGA*
Ga0137366_102583153	3300012354	Vadose Zone Soil	LDVAVSTLMSHLHCYILALAAERVSRDTDIWLEPPTLANLFDEERAVQAKRRSAEGA*
Ga0137366_110777552	3300012354	Vadose Zone Soil	DQLEVAVGTLMSHLHCYILALAAERVSRDTDIWLEPPTLANLFDAEREVRGRRRAAEGP*
Ga0137371_113707131	3300012356	Vadose Zone Soil	RVSRDTDILLEPPTLANLFDAEREVRGQRRAAEGL*
Ga0137384_106439431	3300012357	Vadose Zone Soil	VSRDTDIWVEPPTLATIFDAEREVRGWRRFTEGP*
Ga0137385_104733121	3300012359	Vadose Zone Soil	LHCYILALAAERVSRDTEIWLEPPTLANLFDAEREVRGRRRAAEGP*
Ga0137360_105550311	3300012361	Vadose Zone Soil	TVSTLMSHLHCYILALAAERVSRDTDIWLEPPTLANLFDEARAVHARRRSVEGA*
Ga0137361_108478213	3300012362	Vadose Zone Soil	ERVSRDTDTWLESPTLANIFDEEREVRGRRRSTEGP*
Ga0137361_109015061	3300012362	Vadose Zone Soil	RVSRDTDIWLEPPTLANLFDAEREVRGRRRAAEGP*
Ga0134023_12654561	3300012385	Grasslands Soil	LEVAVSTLMSHLHCYMLALASERVSRDTEIWLEPPTLANLFDEAREVQARRRAAEDS*
Ga0137359_101967371	3300012923	Vadose Zone Soil	TLEVAVSTLMRHLHCSILALAAERVRRDTDIWVEPPTLATMFDEEREVRDRRRSAEGP*
Ga0137419_106615572	3300012925	Vadose Zone Soil	VSRDTDIWLEPPTLANLFDEARAVHARRRSVEGA*
Ga0137419_110740632	3300012925	Vadose Zone Soil	MSHLHCYILALAAERVSRDTDIWVEPPTLANLFDEERAVQAKRRSAEGA*
Ga0137416_105709311	3300012927	Vadose Zone Soil	VSTLMSHLHCYILALAAERVSRDTDIWLEPPTLANLFDEARAVHARRRSVEGA*
Ga0137407_102950361	3300012930	Vadose Zone Soil	MSHMHCYILALAAERVSRDTDIWVEPPTLVNLFDEARAVQARRRSVEGA*
Ga0137407_117581002	3300012930	Vadose Zone Soil	LMRHLHCYILALAAERVSRDTDIWVEPPTLANIFDEEREVRGRRRSAEGP*
Ga0137407_118925142	3300012930	Vadose Zone Soil	LMSHLHCYILALAAERVSRDTDTWLEPPTLANIFDEEREVRGRRRSTEGP*
Ga0137410_115253061	3300012944	Vadose Zone Soil	AERVSRDTDIWVEPPTLATIFDEEREVRGRRRSAEGP*
Ga0137410_118902191	3300012944	Vadose Zone Soil	LHCYILALAAERVSRDTDTWLEPPTLANIFDEEREVRGRRRSTEGP*
Ga0126375_101972111	3300012948	Tropical Forest Soil	MALAAERVSRDTDIWLEPPTLANLFDEQREVRGRRRGADGS
Ga0126369_100520188	3300012971	Tropical Forest Soil	LEVAVSTLMSHLHCYMLALAAERVSRDTEIWLEPPTLANLFDEAREVQARRRAAEDS*
Ga0126369_100764274	3300012971	Tropical Forest Soil	VSRDTDIWLEPPTLANLFDEAREVRARRHAAEES*
Ga0126369_101858812	3300012971	Tropical Forest Soil	LDVAVSTLMNHLHCYILALAAERVSRDTEVWLEPPTLANLFDEEREVRARRHAAEES*
Ga0126369_109871722	3300012971	Tropical Forest Soil	AQLEVAVGTLMSHLHCYILALAAERVSRDTEIWLEPPTLANLFDEDREVRGRRRAAEGL*
Ga0126369_110548631	3300012971	Tropical Forest Soil	ERVSRDTEIWLEPPTLANLFDEEREVRARRHAAEES*
Ga0126369_111269692	3300012971	Tropical Forest Soil	LAAERVSRDTEIWLEPPTLANLFDEAREVRGRRRSTEGP*
Ga0126369_113933931	3300012971	Tropical Forest Soil	ILALAAERVSRDTEIWLEPPTLANLFDAEREVRGQRRSAEGL*
Ga0126369_114959371	3300012971	Tropical Forest Soil	LALAAERVSRDTDIWLEPPTLANLFDEAREVRARRHAAEES*
Ga0126369_121829951	3300012971	Tropical Forest Soil	LAAERVSRDTDIWLEPPTLANLFDEEREVRGRRRSADGS*
Ga0163162_133278082	3300013306	Switchgrass Rhizosphere	LMRHLHCSILALAAERVSRDTDIWVEPPTLANLFDEEREVRARRRSAEGS*
Ga0182000_103014682	3300014487	Soil	AVSTLMSHLHCYMLALAAERVSRNTEIWLEPPTLANLFDEAREVQARRRAAEDS*
Ga0180104_10239631	3300014884	Soil	ASTLMRHMHCYILALAAERVSRDTDIWVEPPTLTNLFDAERAVRTQQRPPRLSLER*
Ga0137403_107217711	3300015264	Vadose Zone Soil	ALAAERVSRDTDIWVEPPTLATIFDEEREVRGQRRSAEGP*
Ga0132255_1000240989	3300015374	Arabidopsis Rhizosphere	LMSHLHGYILALAAERVSRGTDIWLEPPTLANILDEEREVRGRRRAAEGP*
Ga0182041_103898431	3300016294	Soil	LAAERVSHDTEIWVEPPTLENLFDEEREVRARRRSAEGS
Ga0182041_104681542	3300016294	Soil	AVSTLMNHLHCYILALAAERVSRDTEIWLEPPTLANLFDEEREVRARRHAAEES
Ga0182033_104880052	3300016319	Soil	LAAERVSRDTEIWLEPPTLANLFDAEREVRGQRRSAEGL
Ga0182033_108769571	3300016319	Soil	YIMALAAERVSRDTDLWLEPPTLANLFDEAREVRARRHAAEES
Ga0182035_119033822	3300016341	Soil	LHCYILALAAERVSRDTDIWLEPPTLANLFDEEREVRARRHAAEES
Ga0182032_101109311	3300016357	Soil	STLMNHLHCYILALAAERVSRDTEIWLEPPTLANLFDEEREVQARRHAAEES
Ga0182034_110398311	3300016371	Soil	QLEVAVSTLMNHLHCYILALAAERVSRDTDIWLEPPTLANLFDEERKVRARRHAAEDS
Ga0134112_101526381	3300017656	Grasslands Soil	ESVSRHTDIWVEPPTLANIFDEEREVRALRRSSEGS
Ga0163161_108137442	3300017792	Switchgrass Rhizosphere	GTLMSHLHCYILALAAERVSRDTDIWLEPPTLANLFDAEREVRGQRRCTEEP
Ga0163161_117694682	3300017792	Switchgrass Rhizosphere	ALAAERVSRDTEIWLEPPTLANLFDAEREVRGQRRSAEGP
Ga0163161_119231561	3300017792	Switchgrass Rhizosphere	HCYMLALAAERVSRDTEIWLEPPTLANLFDEEREVRARRHSTEES
Ga0184642_12798241	3300019279	Groundwater Sediment	QLEVAVSTLMNHLHCYILALAAERVSRDTEIWLEPPTLANLFDEEREVRARRHSAEES
Ga0126371_113869433	3300021560	Tropical Forest Soil	LDVAVSTLMSHLHCYILALAAERVSRDTEFWLEPPTLANLFDEEREVRGRRRAAEGP
Ga0126371_125927411	3300021560	Tropical Forest Soil	RVSRDTEIWLEPPTLANLFDEQREVRGHRRAAEGS
Ga0207646_103915013	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LALAAESVSRRTDIWVEPPTLANIFDAEREVRARRRSVEGA
Ga0207646_106232882	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LMSHMHCYILALAAERVSRDTDIWVEPPTLANILDEEREVRARRRSSEGS
Ga0207712_119986521	3300025961	Switchgrass Rhizosphere	YILALAAERVSRDTEIWLEPPTLANLFDAEREVRGQRRSAEGP
Ga0207675_1005534641	3300026118	Switchgrass Rhizosphere	ALAAERVSRDTDIWLEPPTLANLFDAEREVRGQRRAAEGP
Ga0207675_1017624561	3300026118	Switchgrass Rhizosphere	ALAAERVSRDTDIWLEPPTLANLFDAEREVRGRRRAAEGP
Ga0209238_12790682	3300026301	Grasslands Soil	MSHLHCYILALAAERVSRDTDIWVEPPTLANLFDEERAVQAKRRSAEGA
Ga0209388_11912682	3300027655	Vadose Zone Soil	CSILALAAERVSRDTDIWVEPPTLATIFDEEREVRGRRRSAEGP
Ga0209180_101851791	3300027846	Vadose Zone Soil	MSHLHCYILALSAERVSRDTDIRVEPPTLVNIFDEEREVRARRRSAEGS
Ga0209283_102736341	3300027875	Vadose Zone Soil	ERVSRDTDIWVEPPTLATIFDEEREVRGRRRSAEGP
Ga0209481_103474522	3300027880	Populus Rhizosphere	YMLALAAERVSRNTEIWVEPPTLANIFEAEREVRARRRSGEGA
Ga0209590_100939814	3300027882	Vadose Zone Soil	VAVSTLMSHLHCSILALAAERVSRDTDIWVEPPTLANIFDAEREVRGWRRFTEGP
Ga0209590_101107421	3300027882	Vadose Zone Soil	HLHCYILALSAERVSRDTDIRVEPPTLVNIFDEEREVRARRRSAEGS
Ga0209488_100474431	3300027903	Vadose Zone Soil	VSTLMSHLHCSILALAAERVSRDTDIWVEPPTLATIFDEEREVRGRRRSAEGP
Ga0209382_119461412	3300027909	Populus Rhizosphere	EVAVSTLMSHLHCYILALAAERVSRDTEIWLEPPTLANLFDEEREVRGRRRAVEEP
Ga0307312_108375132	3300028828	Soil	TLMRHLHCYILALAAERVSRDTDIRVEPPTLVNIFDEEREVRARRRSAEGS
Ga0102752_15146521	3300030783	Soil	HLHCYILALAAERVSRDTEIWLEPPTLANLFDEEREVRARRHSAEES
Ga0306918_111841532	3300031744	Soil	MNHLHCYILALAAERVSRDTEIWLEPPTLANLFDAEREVRARRHAAEES
Ga0306918_114199782	3300031744	Soil	GTLMSYLHCYILALAAERVSRDTDIWVEPPTLANLFDGEREVRARRRSPEEP
Ga0318552_104620381	3300031782	Soil	LALAAERVSRDTEIWLEPPTLANLFDAEREVRARRHAAEES
Ga0306919_111673292	3300031879	Soil	EVAVSTLMNHLHCYILALAAERVSRDTDLWLEPPTLANLFDEAREVRARRHAAEES
Ga0306925_107303461	3300031890	Soil	ILALAAERVSRDTEIWLEPPTLANLFDEEREVQARRHAAEES
Ga0306925_113670252	3300031890	Soil	VAVSTLMSNLHCYILALAAERGSRDTEIWLEPPTLANLLDEEREVRARRHTVEES
Ga0318536_107113931	3300031893	Soil	PTHVEVVVSTLMSHLHCSILALAAERVSRDTAIWLAPPTLANLFDEAREVHARRRSVEGA
Ga0306923_113012381	3300031910	Soil	MSHLHCYILALAAERVSRDTDIWLEPPTLANLFDEQREVRGRRRSVDGS
Ga0310912_111754762	3300031941	Soil	DQLEVVVSTLMSHLHCYILALAAERVSRDTDIWLEPPTLANLFDGEREVRARRHSAEES
Ga0310912_113503071	3300031941	Soil	ERVSRDTEIWIEPPTLANLFDGEREVRARRRPAEES
Ga0310913_101964373	3300031945	Soil	LHCYILALAAERVSRDTEIWLEPPTLANLFDAEREVRARRHAAEES
Ga0310910_102976511	3300031946	Soil	EQLDVAVGTLMRYFHCYILALAAERVSRDTDIWVEPPTLANLFDEAREVRARRRTVEES
Ga0310910_112688022	3300031946	Soil	TLMRHLHCYILALAAERVSRDTEIWLEPPTLANLFDAEREVRGQRRSAEGL
Ga0310910_113973651	3300031946	Soil	DQLDVAVSTLLSHLHCYILALAAERVSCDTDMWLEPPTLVNLFDEKREVRGRRRAADGS
Ga0310909_108938171	3300031947	Soil	LHCYILALAAERVSRDTDIWLEPPTLANIFDEEREVRGRRRAAEGP
Ga0306926_114634581	3300031954	Soil	ALAAERVSRHTDLWIEPPTVANIFDEEREVRARRRSIEGA
Ga0306922_118144421	3300032001	Soil	HLHCYIVALAAERVSCDTEIWLEPPTLANLFDAEREVRGQRRSAEGL
Ga0310906_108949821	3300032013	Soil	MSHLHCYILALAAERGSRDTDTWLEPPTLANIFDEEREVRGRRRCTEGP
Ga0306924_105047261	3300032076	Soil	KLEVAVSTLMSHLHCYILALSAERVSRDTDIWVEPPTLANIFDEDREVRGRRRFIEGP
Ga0306924_105591803	3300032076	Soil	MRYFHCYILALAAERVSRDTDIWVEPPTLANLFDEAREVRARRRTVEES
Ga0314801_150455_396_545	3300034676	Soil	MSHLHCYILALAAERVSRDTDIWLEPPTLANLFDEEREVRARRHSTEES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F028607

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences