Metagenome / Metatranscriptome Family F028466

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F028466
Family Type	Metagenome / Metatranscriptome
Number of Sequences	191
Average Sequence Length	46 residues
Representative Sequence	LYEAEIVAEVEMRTKDVLTVKVALVAPAGTITLEGTLAAPLLLESKT
Number of Associated Samples	130
Number of Associated Scaffolds	191

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.81 %
% of genes near scaffold ends (potentially truncated)	63.35 %
% of genes from short scaffolds (< 2000 bps)	83.77 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (67.539 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (53.403 % of family members)
Environment Ontology (ENVO)	Unclassified (50.785 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.450 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.67% β-sheet: 0.00% Coil/Unstructured: 69.33%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 191 Family Scaffolds
PF01479	S4	14.14
PF13579	Glyco_trans_4_4	4.19
PF12158	DUF3592	2.62
PF16576	HlyD_D23	2.62
PF01406	tRNA-synt_1e	2.62
PF01370	Epimerase	1.57
PF00072	Response_reg	1.05
PF13477	Glyco_trans_4_2	1.05
PF05985	EutC	1.05
PF00849	PseudoU_synth_2	1.05
PF07676	PD40	0.52
PF10041	DUF2277	0.52
PF02518	HATPase_c	0.52
PF12840	HTH_20	0.52
PF00551	Formyl_trans_N	0.52
PF00202	Aminotran_3	0.52
PF12697	Abhydrolase_6	0.52
PF13440	Polysacc_synt_3	0.52
PF07593	UnbV_ASPIC	0.52
PF04185	Phosphoesterase	0.52
PF01527	HTH_Tnp_1	0.52
PF11954	DUF3471	0.52
PF00990	GGDEF	0.52
PF00313	CSD	0.52
PF00580	UvrD-helicase	0.52
PF13313	DUF4082	0.52
PF07969	Amidohydro_3	0.52
PF13517	FG-GAP_3	0.52
PF00266	Aminotran_5	0.52
PF03544	TonB_C	0.52
PF13620	CarboxypepD_reg	0.52
PF09907	HigB_toxin	0.52
PF08532	Glyco_hydro_42M	0.52
PF13519	VWA_2	0.52
PF00501	AMP-binding	0.52

COG ID	Name	Functional Category	% Frequency in 191 Family Scaffolds
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.62
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.62
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.62
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	1.05
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	1.05
COG4302	Ethanolamine ammonia-lyase, small subunit	Amino acid transport and metabolism [E]	1.05
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.52
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.52
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.52
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.52
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.52
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.52

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.54 %
Unclassified	root	N/A	32.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.54 %
Unclassified	root	N/A	32.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.54 %
Unclassified	root	N/A	32.46 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.65 %
Unclassified	root	N/A	32.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.14 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.46 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.23 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.14 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.18 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.66 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.14 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.05 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.18 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.66 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2.09 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.05 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.18 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	2.09 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	1.57 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.05 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.18 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	2.09 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	1.57 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.05 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.18 %
Massilia niastensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia niastensis	2.09 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	1.57 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.05 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1.05 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10015553	All Organisms → cellular organisms → Bacteria	4224	Open in IMG/M
3300001867\|JGI12627J18819_10201130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300001867\|JGI12627J18819_10291158	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300001867\|JGI12627J18819_10481084	Not Available	510	Open in IMG/M
3300002557\|JGI25381J37097_1064253	Not Available	589	Open in IMG/M
3300002908\|JGI25382J43887_10108850	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300002914\|JGI25617J43924_10310179	Not Available	544	Open in IMG/M
3300002917\|JGI25616J43925_10395787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia niastensis	508	Open in IMG/M
3300005179\|Ga0066684_10599840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300005180\|Ga0066685_10978761	Not Available	560	Open in IMG/M
3300005332\|Ga0066388_108144505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia niastensis	523	Open in IMG/M
3300005439\|Ga0070711_101841051	Not Available	531	Open in IMG/M
3300005450\|Ga0066682_10053258	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300005454\|Ga0066687_10599101	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005545\|Ga0070695_101262372	Not Available	609	Open in IMG/M
3300005555\|Ga0066692_10628112	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005557\|Ga0066704_10340329	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300005558\|Ga0066698_11074608	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300005569\|Ga0066705_10878405	Not Available	532	Open in IMG/M
3300005574\|Ga0066694_10184010	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300005586\|Ga0066691_10772778	Not Available	567	Open in IMG/M
3300005587\|Ga0066654_10128991	All Organisms → cellular organisms → Bacteria → Acidobacteria	1261	Open in IMG/M
3300005598\|Ga0066706_10417405	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300005610\|Ga0070763_10099538	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300006031\|Ga0066651_10707098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	541	Open in IMG/M
3300006794\|Ga0066658_10746831	Not Available	545	Open in IMG/M
3300006797\|Ga0066659_10486177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia niastensis	987	Open in IMG/M
3300006797\|Ga0066659_11588296	Not Available	549	Open in IMG/M
3300006800\|Ga0066660_10872525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia niastensis	733	Open in IMG/M
3300006804\|Ga0079221_10501516	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300007255\|Ga0099791_10421263	Not Available	644	Open in IMG/M
3300007258\|Ga0099793_10000597	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10094	Open in IMG/M
3300007258\|Ga0099793_10230425	Not Available	892	Open in IMG/M
3300007258\|Ga0099793_10331833	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300007265\|Ga0099794_10133946	All Organisms → cellular organisms → Bacteria → Acidobacteria	1252	Open in IMG/M
3300009038\|Ga0099829_10083733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2448	Open in IMG/M
3300009038\|Ga0099829_10454007	All Organisms → cellular organisms → Bacteria → Acidobacteria	1062	Open in IMG/M
3300009038\|Ga0099829_10499133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010	Open in IMG/M
3300009038\|Ga0099829_10800893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	782	Open in IMG/M
3300009038\|Ga0099829_10821979	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300009088\|Ga0099830_10205496	All Organisms → cellular organisms → Bacteria → Acidobacteria	1543	Open in IMG/M
3300009088\|Ga0099830_10478872	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300009088\|Ga0099830_11858430	Not Available	503	Open in IMG/M
3300009089\|Ga0099828_10715101	Not Available	899	Open in IMG/M
3300009089\|Ga0099828_11055189	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300009090\|Ga0099827_10140752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1966	Open in IMG/M
3300009090\|Ga0099827_10654565	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	907	Open in IMG/M
3300009090\|Ga0099827_10680842	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300009137\|Ga0066709_102158678	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300010046\|Ga0126384_12355366	Not Available	515	Open in IMG/M
3300010320\|Ga0134109_10392632	Not Available	553	Open in IMG/M
3300010337\|Ga0134062_10275684	Not Available	789	Open in IMG/M
3300010360\|Ga0126372_10730829	Not Available	971	Open in IMG/M
3300010362\|Ga0126377_12843859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300011269\|Ga0137392_10310263	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300011269\|Ga0137392_10702227	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300011269\|Ga0137392_11264381	Not Available	597	Open in IMG/M
3300011270\|Ga0137391_10242998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1562	Open in IMG/M
3300011271\|Ga0137393_10207332	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300011271\|Ga0137393_10393718	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300011271\|Ga0137393_10413114	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300011271\|Ga0137393_11193709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	646	Open in IMG/M
3300012096\|Ga0137389_10764139	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300012096\|Ga0137389_11211023	Not Available	647	Open in IMG/M
3300012198\|Ga0137364_10733812	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300012198\|Ga0137364_11331087	Not Available	534	Open in IMG/M
3300012199\|Ga0137383_10602304	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300012199\|Ga0137383_11300038	Not Available	518	Open in IMG/M
3300012200\|Ga0137382_10854601	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300012202\|Ga0137363_10112649	All Organisms → cellular organisms → Bacteria	2086	Open in IMG/M
3300012203\|Ga0137399_10286724	All Organisms → cellular organisms → Bacteria → Acidobacteria	1357	Open in IMG/M
3300012203\|Ga0137399_10769204	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300012203\|Ga0137399_10996597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300012207\|Ga0137381_10006999	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8407	Open in IMG/M
3300012208\|Ga0137376_10370963	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300012208\|Ga0137376_10576367	All Organisms → cellular organisms → Bacteria → Acidobacteria	974	Open in IMG/M
3300012209\|Ga0137379_10432088	Not Available	1226	Open in IMG/M
3300012210\|Ga0137378_10604899	All Organisms → cellular organisms → Bacteria → Acidobacteria	1006	Open in IMG/M
3300012210\|Ga0137378_10787401	All Organisms → cellular organisms → Bacteria → Acidobacteria	863	Open in IMG/M
3300012285\|Ga0137370_10338558	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300012349\|Ga0137387_10575736	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300012361\|Ga0137360_10019084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4538	Open in IMG/M
3300012361\|Ga0137360_10528331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1006	Open in IMG/M
3300012361\|Ga0137360_11092712	Not Available	689	Open in IMG/M
3300012362\|Ga0137361_10146609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2106	Open in IMG/M
3300012363\|Ga0137390_10739668	Not Available	944	Open in IMG/M
3300012409\|Ga0134045_1108111	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2445	Open in IMG/M
3300012582\|Ga0137358_10803617	Not Available	624	Open in IMG/M
3300012582\|Ga0137358_10952411	Not Available	559	Open in IMG/M
3300012683\|Ga0137398_10765029	Not Available	674	Open in IMG/M
3300012685\|Ga0137397_11322687	Not Available	511	Open in IMG/M
3300012923\|Ga0137359_10255011	All Organisms → cellular organisms → Bacteria → Acidobacteria	1565	Open in IMG/M
3300012923\|Ga0137359_10450550	All Organisms → cellular organisms → Bacteria → Acidobacteria	1139	Open in IMG/M
3300012924\|Ga0137413_11043592	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300012925\|Ga0137419_11589614	Not Available	556	Open in IMG/M
3300012927\|Ga0137416_11795527	Not Available	560	Open in IMG/M
3300012927\|Ga0137416_11890027	Not Available	546	Open in IMG/M
3300012929\|Ga0137404_10131142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2062	Open in IMG/M
3300012930\|Ga0137407_12230058	Not Available	523	Open in IMG/M
3300012944\|Ga0137410_10432225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1066	Open in IMG/M
3300012975\|Ga0134110_10069759	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300012977\|Ga0134087_10067879	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300012986\|Ga0164304_10679056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300015051\|Ga0137414_1057712	All Organisms → cellular organisms → Bacteria → Acidobacteria	819	Open in IMG/M
3300015051\|Ga0137414_1222333	All Organisms → cellular organisms → Bacteria	3055	Open in IMG/M
3300015052\|Ga0137411_1266235	Not Available	591	Open in IMG/M
3300015052\|Ga0137411_1268908	All Organisms → cellular organisms → Bacteria → Acidobacteria	1130	Open in IMG/M
3300015053\|Ga0137405_1216116	All Organisms → cellular organisms → Bacteria → Acidobacteria	991	Open in IMG/M
3300015053\|Ga0137405_1240047	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300015053\|Ga0137405_1421295	All Organisms → cellular organisms → Bacteria	4991	Open in IMG/M
3300015054\|Ga0137420_1192263	Not Available	1456	Open in IMG/M
3300015241\|Ga0137418_10010455	All Organisms → cellular organisms → Bacteria → Acidobacteria	8533	Open in IMG/M
3300015241\|Ga0137418_10621841	Not Available	844	Open in IMG/M
3300015242\|Ga0137412_10111596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2219	Open in IMG/M
3300015242\|Ga0137412_10382535	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300015242\|Ga0137412_11035939	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300015245\|Ga0137409_11187874	Not Available	603	Open in IMG/M
3300018433\|Ga0066667_10142080	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300018433\|Ga0066667_10145141	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300019866\|Ga0193756_1049573	Not Available	574	Open in IMG/M
3300020199\|Ga0179592_10062146	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300020199\|Ga0179592_10133461	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300020199\|Ga0179592_10135776	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300020579\|Ga0210407_10017762	All Organisms → cellular organisms → Bacteria → Acidobacteria	5277	Open in IMG/M
3300020579\|Ga0210407_10327025	Not Available	1198	Open in IMG/M
3300020579\|Ga0210407_11013452	Not Available	633	Open in IMG/M
3300020581\|Ga0210399_10897684	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300021088\|Ga0210404_10019542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2897	Open in IMG/M
3300021168\|Ga0210406_10569104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300021168\|Ga0210406_10582671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300021401\|Ga0210393_11015892	Not Available	671	Open in IMG/M
3300021420\|Ga0210394_10124755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2230	Open in IMG/M
3300021478\|Ga0210402_11648017	Not Available	568	Open in IMG/M
3300021559\|Ga0210409_11222283	Not Available	627	Open in IMG/M
3300024178\|Ga0247694_1011029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300024249\|Ga0247676_1003256	All Organisms → cellular organisms → Bacteria → Acidobacteria	2397	Open in IMG/M
3300024330\|Ga0137417_1438496	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300026295\|Ga0209234_1245039	Not Available	585	Open in IMG/M
3300026296\|Ga0209235_1111443	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300026304\|Ga0209240_1045831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1652	Open in IMG/M
3300026331\|Ga0209267_1079990	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300026469\|Ga0257169_1055489	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300026515\|Ga0257158_1060108	Not Available	713	Open in IMG/M
3300026530\|Ga0209807_1187365	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300026537\|Ga0209157_1093493	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300026551\|Ga0209648_10027155	All Organisms → cellular organisms → Bacteria → Acidobacteria	5004	Open in IMG/M
3300026551\|Ga0209648_10719062	Not Available	545	Open in IMG/M
3300026551\|Ga0209648_10720941	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300026555\|Ga0179593_1134751	All Organisms → cellular organisms → Bacteria	2396	Open in IMG/M
3300026557\|Ga0179587_10016284	All Organisms → cellular organisms → Bacteria → Acidobacteria	3942	Open in IMG/M
3300026557\|Ga0179587_10045488	All Organisms → cellular organisms → Bacteria → Acidobacteria	2504	Open in IMG/M
3300026557\|Ga0179587_10143431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1483	Open in IMG/M
3300026557\|Ga0179587_10209719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1237	Open in IMG/M
3300026557\|Ga0179587_10691897	Not Available	671	Open in IMG/M
3300026557\|Ga0179587_10738744	Not Available	648	Open in IMG/M
3300027381\|Ga0208983_1013465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1572	Open in IMG/M
3300027562\|Ga0209735_1012885	Not Available	1642	Open in IMG/M
3300027643\|Ga0209076_1091050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300027651\|Ga0209217_1077338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300027663\|Ga0208990_1016099	All Organisms → cellular organisms → Bacteria	2473	Open in IMG/M
3300027669\|Ga0208981_1176380	Not Available	539	Open in IMG/M
3300027846\|Ga0209180_10160887	All Organisms → cellular organisms → Bacteria → Acidobacteria	1295	Open in IMG/M
3300027862\|Ga0209701_10269140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	989	Open in IMG/M
3300027862\|Ga0209701_10311879	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300027869\|Ga0209579_10387026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300027875\|Ga0209283_10237558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300027882\|Ga0209590_10086213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1845	Open in IMG/M
3300027882\|Ga0209590_10507492	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300027882\|Ga0209590_10851012	Not Available	577	Open in IMG/M
3300027889\|Ga0209380_10559905	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300028047\|Ga0209526_10424247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300028536\|Ga0137415_10052693	All Organisms → cellular organisms → Bacteria → Acidobacteria	3940	Open in IMG/M
3300030991\|Ga0073994_10080233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1526	Open in IMG/M
3300031231\|Ga0170824_125819984	Not Available	543	Open in IMG/M
3300031474\|Ga0170818_104930387	Not Available	554	Open in IMG/M
3300031720\|Ga0307469_10738393	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	897	Open in IMG/M
3300031740\|Ga0307468_100984152	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300031740\|Ga0307468_101912795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300031754\|Ga0307475_10311395	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300031754\|Ga0307475_11027681	Not Available	647	Open in IMG/M
3300031754\|Ga0307475_11296416	Not Available	564	Open in IMG/M
3300031820\|Ga0307473_11051413	Not Available	597	Open in IMG/M
3300031823\|Ga0307478_10501161	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300031962\|Ga0307479_10032845	All Organisms → cellular organisms → Bacteria	4950	Open in IMG/M
3300032180\|Ga0307471_100416970	All Organisms → cellular organisms → Bacteria → Acidobacteria	1474	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.15%
Loam	Environmental → Terrestrial → Soil → Loam	7.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	59.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.52%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	53.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.05%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.05%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.05%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.52%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100155537	3300001661	Forest Soil	VLLYEAEIMTEVETRTPEVLTVNVTLVAPAGTVTLEGTLAA
JGI12627J18819_102011301	3300001867	Forest Soil	VLLYEAVIVAEVDTRTIDVLTANVALVLPAGMVTLDGTLAAPLLLESITCAPP
JGI12627J18819_102911582	3300001867	Forest Soil	VLLYEAEIVAVVDTTTIDVFTVKLALVLPAGTVTLEGTLAAPLLLESIT
JGI12627J18819_104810842	3300001867	Forest Soil	LYLAAIVDEVEISTIDVLTVKLALLAPAGMNTLPGTLAAPLL
JGI25381J37097_10642532	3300002557	Grasslands Soil	MVAEVDMRTIDVFTGKVTLLLPAGTVTLEGTLAAALLLESVTCAPPAG
JGI25382J43887_101088501	3300002908	Grasslands Soil	LYEAEIVAEVEMRTKDVLTVKVTLLAPAGTITLEGTLAAPLLLERKTWAPPAGAGPVR
JGI25617J43924_103101791	3300002914	Grasslands Soil	EAEVEMTTKDVFTVKVALVAPAGTIKLEGTLAAPLLLERET*
JGI25616J43925_103957871	3300002917	Grasslands Soil	VLLYEAEIVTEVETRTTEVLTVNVALVAPAGTVTLEGTLAAP
Ga0066684_105998401	3300005179	Soil	VVLLYVAEIVADVAKITMDVFTVNVVLVAPAGTVTLDGTLAA
Ga0066685_109787612	3300005180	Soil	VPLYEAEMLAEVETRTPDVFTVKVTLVAPAGTVTLEGTLATL
Ga0066388_1081445051	3300005332	Tropical Forest Soil	VLLYEAEIVAEVDMRTIDVLTVKVALALPAGMVTLNGTLAAPLLLESMTCAPP
Ga0070711_1018410511	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MESVAERAVLLYDAVMVAEVEKRTADVLTVKEALVAPAGTVTLEGT*
Ga0066682_100532581	3300005450	Soil	VAEVDKRTTDVFTVKVALLLPAGTITLEGTLAAPLLLESITCA
Ga0066687_105991012	3300005454	Soil	VLLYEAEIVAEVDTRTTDVLTVKVALVLPAGMVTLAGTLAAALLLE
Ga0070695_1012623722	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VLLYEAEIVAEVDMRTIDVLTVKVALVLPAGTVTMDGTLAAPLLLESMTCAPPAGA
Ga0066692_106281122	3300005555	Soil	VPLYEAEIVEEVEMSTIDVLTVKDTLLAPAGTITLEGTLAAPLLLERET*
Ga0066704_103403292	3300005557	Soil	LYEAEIVAEVEMRTKDVFTVKVALVAPAGTITLEGTLAALLLLDRKT*
Ga0066698_110746082	3300005558	Soil	LYEPEIVAVVEMMTIDVFTVNVALMAPAGTVTLDGTLA
Ga0066705_108784052	3300005569	Soil	LYEAEIVAEVDMRTTDVFTVKVTLLLPAGTVTLEGTLAATLLLESVTC
Ga0066694_101840101	3300005574	Soil	MVAEVDMRTIDAFTVKVTLLLPAGTVTVEGTLAAALLLESVTC
Ga0066691_107727782	3300005586	Soil	LYEAEIVDEVEMRTMDVLTVKDALAAPAGMNTVDGTLAAPLLLESATVAPPDGAGPLR
Ga0066654_101289912	3300005587	Soil	VVLLYVAEIVADVAKITMDVFTVNVALVAPAGTVALEGTLAAPLLLSSAT
Ga0066706_104174052	3300005598	Soil	MSTIEVLTVKDAELAPAGTVTLEGTLAAPLLLERTTIAP
Ga0070763_100995382	3300005610	Soil	VAEVEMTTKDVFTVKVALVAPAGTITLDGTLAAPLSLERKT*
Ga0066651_107070982	3300006031	Soil	MVAEVDMRTIDAFTVKVTLLLPAGTVTVEGTLAAALLLESVTCAPPAG
Ga0066658_107468311	3300006794	Soil	VLLYEAEIVTEVETRTTEVLTANVALVAPAGTNTLEGTLAAPLLLESTT
Ga0066659_104861772	3300006797	Soil	VPLYEAEIVTEVETRTTDVLTAKVALVAPAGTVTLEGTLAAPLLLESMTRTTSGSGRA*
Ga0066659_115882962	3300006797	Soil	LYEAEIVAEVDMRTTDVFTVKVTLLLPAGTVTLEGTLAATLLLES
Ga0066660_108725251	3300006800	Soil	VLLYEAEIVTEVETRTTEVLTANVALVAPAGTNTLEVTLAAPLLLESTTCAPPAGAGP
Ga0079221_105015162	3300006804	Agricultural Soil	VVLLYEAEIVAEVASTTTDVLTAKVALVAPSGTVTLEGTLAAPLSLARAT*
Ga0099791_104212631	3300007255	Vadose Zone Soil	VEMRTKDVLTVKVALVAPAGTITLEGTLAAPLSLERKT*
Ga0099793_100005979	3300007258	Vadose Zone Soil	LYEAEIVAEVEMRTKDVLTVKVALVVPAGMVTLDGTLAAPSLLERKT*
Ga0099793_102304251	3300007258	Vadose Zone Soil	VLLYEAEIVTDVETRTTEVLTANVALVAPAGTNTLEGT
Ga0099793_103318332	3300007258	Vadose Zone Soil	LYETEIVAEVERRTMEVFTVKVALVAPAGTNTLEGTRAAPLLLESMTLA
Ga0099794_101339461	3300007265	Vadose Zone Soil	LYEAEIVAEVDMKTAEVLTVKVALLAPAGTITLEGTLAAPL
Ga0099829_100837333	3300009038	Vadose Zone Soil	LYEAEIVEEVEMRTKEVLTVKVALVAPAGTITLEGTLAAPLLLERKT*
Ga0099829_104540073	3300009038	Vadose Zone Soil	LYEAEIVAEVERRTMDVFTVKVALVAPAGTNTLEGTRAAPLLLES
Ga0099829_104991331	3300009038	Vadose Zone Soil	MRTNDVLTVKVALVAPAGTITVEGTLAAPLLLERKT*
Ga0099829_108008931	3300009038	Vadose Zone Soil	LYEAEIVAEVEMRTKDVLTVKLTLLAPAGTITLEGTLAAPLLLERKT*
Ga0099829_108219792	3300009038	Vadose Zone Soil	AEVDMKTAEVLTVKVALLAPAGTITLEGTLAAPLLLERNT*
Ga0099830_102054963	3300009088	Vadose Zone Soil	LYEAEIVEEVKMRTKDVLTVKVALVAPAGTITLEGTLAAPLLL
Ga0099830_104788722	3300009088	Vadose Zone Soil	LYEAEIVAEVEMRTKDVLTVKVALVAPAGTITLEGTLAAPLLLESKT*
Ga0099830_118584301	3300009088	Vadose Zone Soil	LYEAEIVAEVETRTTDVLILKVAFVAPSGTITLEGTLAAPL
Ga0099828_107151012	3300009089	Vadose Zone Soil	LYEAEIVAEVDMKTAEVLTVKVALLAPAGTITLEGTLAAPLLLERNT*
Ga0099828_110551891	3300009089	Vadose Zone Soil	VAEVEMRTKDVFTVKVALVAPAGTITLEGTLAALLLLERRT*
Ga0099827_101407521	3300009090	Vadose Zone Soil	VAEVEMRTKDVLTVKVVLVAPAGTITLEGTVAAPLLLERNT*
Ga0099827_106545652	3300009090	Vadose Zone Soil	LYEAEIVADVEMRTMDVLTVKDALVPPAGMNTLEGTLATPLLLERMT
Ga0099827_106808421	3300009090	Vadose Zone Soil	LYEAEIVEEVEMSTIDVLTVKDTLLAPAGTITLEGTLAAPLLLERET*
Ga0066709_1021586781	3300009137	Grasslands Soil	LVVLLYEAEIVEVVEIRTIDVFTVNVALVLPAGTVTLAGTLAAPLLLDSVTC
Ga0126384_123553661	3300010046	Tropical Forest Soil	VLLYEAEIVAEVDMRTIDVLTVKVALALPAGTVTVNGTLAAPLPLESMTC
Ga0134109_103926321	3300010320	Grasslands Soil	VLLYEAEIVTEVETRTTEVLTAKVALVAPAGTNTLEGTLAAPLLLESTTCAPP
Ga0134062_102756842	3300010337	Grasslands Soil	LYEAEMVAEVDMRTIDVFTGKVTLLLPAGTVTLEGTLAAALLLES
Ga0126372_107308293	3300010360	Tropical Forest Soil	VAEVEMSTGAVLTVKDALVAPAGTNTLEGTLAGPL
Ga0126377_128438592	3300010362	Tropical Forest Soil	ADLVVPLYVAEILAEVDMRTRDVVTVKLALVLPAGTVTLDGTPAT*
Ga0137392_103102632	3300011269	Vadose Zone Soil	LYEAEIVEEVEMRTKDVLTVKVALVAPAGTITLEGTLAAPLLLESKT*
Ga0137392_107022272	3300011269	Vadose Zone Soil	VAEVEMRTKDVLTVKVVLVAPAGTITLEGTVAALLLLERNT*
Ga0137392_112643812	3300011269	Vadose Zone Soil	LYEAEIVAEVEMRTKDVLTVKVALVAPAGTIALEGTLAAPLLLESKT*
Ga0137391_102429981	3300011270	Vadose Zone Soil	LYEAEIVAEVEKRTPDVLTVKVALLAPAGTITLEGTLAGPL
Ga0137393_102073323	3300011271	Vadose Zone Soil	MRTKDVFTVKVALVAPAGTITLEGTLAALLLLERRT*
Ga0137393_103937182	3300011271	Vadose Zone Soil	LYEPEIVTVVETINTDVFTVKVALVAPAGTVTLAGTLATE
Ga0137393_104131143	3300011271	Vadose Zone Soil	LYEAEIVAEVERRTMEVFTVKVALVAPAGTNTLEGTRAAPLLLESMTVAPP
Ga0137393_111937091	3300011271	Vadose Zone Soil	LYEAEIVEEVEMRTKDVLTVKVALVAPAGTITLEGTLAAPLLLKSATI
Ga0137389_107641392	3300012096	Vadose Zone Soil	YEAEIVAEVDMKTAEVLTVKVALLAPAGTITLEGTLAAPLLLERNT*
Ga0137389_112110232	3300012096	Vadose Zone Soil	MRTNDVLTVKVALVAPAGTVTLDGTVAAPLLLERKT*
Ga0137364_107338122	3300012198	Vadose Zone Soil	LYDAEIVAEVERRTMDVLTVKVALVAPAGTNTLEGTRAA
Ga0137364_113310871	3300012198	Vadose Zone Soil	LYEAEMVAEVDMRTIDAFTVKVAVVLPAGTVTLEGTLAAALLLESVTCAPPAGA
Ga0137383_106023042	3300012199	Vadose Zone Soil	LYEAEIVAEVEMRTKDVLTVKLTLLAPAGTITLEGTLAAPL
Ga0137383_113000382	3300012199	Vadose Zone Soil	VPLYDAEIVTEVETRTTDVLTAKVALVAPAGTVTLEGTLAAPLLLESMTCAPPA
Ga0137382_108546012	3300012200	Vadose Zone Soil	LYEAEIVAEVEKRTMEVFTVKVALVAPATTVTLEGTRAAPLLLE
Ga0137365_108415491	3300012201	Vadose Zone Soil	MVTVVETRTKDVFTLNVTLVAPAGTVTLAGTLATEGLL
Ga0137363_101126493	3300012202	Vadose Zone Soil	LYEAEIVAEVGTRTADVFTLKAALLAPAGTVTLAGTLAAPLLLESMTCAPPAGAG
Ga0137363_104244524	3300012202	Vadose Zone Soil	VRVVPLYEAEIVAEVGRRTMDVLTVKDALVAPAGTVTLEGTLAAPLLLESATIAPPAGAGPLNV
Ga0137399_102867241	3300012203	Vadose Zone Soil	LYVAEIVAEVEMRTKDVLTVKVALVVPAGMVTLDGTLAAPSLLERKT*
Ga0137399_107692042	3300012203	Vadose Zone Soil	VPLYEAEIVTEVETRTTEVLSANVALVAPAGTNTLEGTPAAPLLLESMTCAPPAGAGPL
Ga0137399_109965971	3300012203	Vadose Zone Soil	LYEAEIVADVGKRTIDVFTGKVAPVAPAGTNTLEGTPATPLLLESMTCAPPAGA
Ga0137380_101677962	3300012206	Vadose Zone Soil	LYEAEIVTEVETITIDVFTVKVALVAPAGTVTLAGTLATEGLLLERE
Ga0137381_100069996	3300012207	Vadose Zone Soil	LYEAEIVAEVDMRTNDVLTVKLTLLAPAGTITLEGTLAAPLLLERKT*
Ga0137376_103709633	3300012208	Vadose Zone Soil	LYEAEIVAEAEKRTMDVFTVKVALVAPATTVTLEGTRA
Ga0137376_105763672	3300012208	Vadose Zone Soil	LYEAEIVAEVEKRTMDVFTVKVALVAPATTVTLEGTRAAPLLLESMTVAPPAGAGAL
Ga0137379_104320882	3300012209	Vadose Zone Soil	LYEAEIVAEVDMRTIDVFTVKVALVAPAGMVTLPGTAATPGLLLESVTN
Ga0137378_106048993	3300012210	Vadose Zone Soil	LYEAEMVAEVDMRTNDVLTVKLTLLAPAGTITLEGTLAAPLLLERKT*
Ga0137378_107874013	3300012210	Vadose Zone Soil	LYEAEIVAEVEMRTVDVLTVKDALVAPAGTMTLEGTLAAPLLLERKT*
Ga0137378_109203011	3300012210	Vadose Zone Soil	LYEAEIVTEVETITIDVFTVKVALVAPAGTVTLAGTLATEGLLL
Ga0137370_103385581	3300012285	Vadose Zone Soil	LYEAEMVAEVDMRTIDAFTVKVAVVLPAGTVTLEGTLAAALLLES
Ga0137387_105757362	3300012349	Vadose Zone Soil	LYEAEIVAEVEMRTKDVLTVKVTLLAPAGTITLEGTLAA
Ga0137360_100190841	3300012361	Vadose Zone Soil	LYEAEIVAEVEKRTPDVLTVKVALLAPAGTITLEGTLAGPLLERKT
Ga0137360_105283311	3300012361	Vadose Zone Soil	LYEAEMLAEVVRRTPDVFTVKVALVAPAGTVTLDGTLATVVLL
Ga0137360_110927122	3300012361	Vadose Zone Soil	VLLYEAEIVTEVETRTTEVLTANVALVAPAGTNTLEGTLAAPLLLESTTCAP
Ga0137361_101466093	3300012362	Vadose Zone Soil	LYEAEIVAEVEMRTKDVLTVKVALVAPAGTITLEGTLAAPLLLERKT*
Ga0137390_107396681	3300012363	Vadose Zone Soil	LFLYEAEISTEVAKSTKDVFTVKVAVVAPAGTITLEGTLAPPVLLLESMICEP
Ga0134045_11081111	3300012409	Grasslands Soil	LYEPEIVAVVEMMTIDVFTVNVALMAPAGTVTLDGTLARPLL
Ga0137358_108036171	3300012582	Vadose Zone Soil	VLLYEAEIVTEVETTTTEVRTVNVALVPPAGTVTLEDTLAAPL
Ga0137358_109524112	3300012582	Vadose Zone Soil	LYEPEIVAEVEMSTIDVLTVKDARLAPAGTITLEGTRAAPLLLKSATI
Ga0137398_105498553	3300012683	Vadose Zone Soil	VPLYRPEIVAEVEIRTMEVLTVNDALVAPAGMNTLPGTLAT
Ga0137398_107650292	3300012683	Vadose Zone Soil	VAEITAEVETRTMDVLTRNVALVAPAGTSTLEGTLAALLLLESEI*
Ga0137397_113226871	3300012685	Vadose Zone Soil	VAEIAAEVETSTIDVLAWNVALLAPAGTTTLAGTLAALLLLESATRIPPA
Ga0137359_102550111	3300012923	Vadose Zone Soil	LYEAEIVEEVEMSTIDVLTVKDAELAPAGITTLEGTLAA
Ga0137359_104505502	3300012923	Vadose Zone Soil	MLLYEAEIVTEVETRTTEVVTANVALVAPAGTNTLE
Ga0137413_110435921	3300012924	Vadose Zone Soil	LYEAEIVAEVGKRTADVFTLKVALVAPAGTVTLAGTLAAPLLLESMTCAPPAGA
Ga0137419_115896141	3300012925	Vadose Zone Soil	VLLHEVEIVTKVETSTTEVLTVNVVLVAPAGTVTLEGTLAAPLL
Ga0137416_117955271	3300012927	Vadose Zone Soil	MRTKDVLTVKVALVAPAGTITLEGTLAAPLLLESKT*
Ga0137416_118900272	3300012927	Vadose Zone Soil	VLLYEAEIVTEVEKRSIDVSTVKVGFVAPAGTITLEGTLAAPVLLLESM
Ga0137404_101311421	3300012929	Vadose Zone Soil	LLLYEAEILTEVEKKTMDVFTVKVALVAPAGTITLEGTL
Ga0137407_122300581	3300012930	Vadose Zone Soil	MVAEVDMRTIDVFTVKVAPVLPAGTVTLERTLAAPLLLESVT
Ga0137410_104322251	3300012944	Vadose Zone Soil	LYEAEMLAEVVRRTPDVFTVKVALVAPAGTVTLDGTLATVVL
Ga0134110_100697592	3300012975	Grasslands Soil	VLLYEAEIVAEVDTRTTDVLTVKVALVLPAGMVTLAGTLAAALLLESTTC
Ga0134087_100678791	3300012977	Grasslands Soil	VLLYEAEIVAEVDTRTTDVLTVKVALVLPAGMVTLAGTLAAALL
Ga0164304_106790562	3300012986	Soil	LYEAEIVAEVEIRTNDVLTVKVALVAPAGTITLEGTLAAALLLERKT*
Ga0137414_10577122	3300015051	Vadose Zone Soil	MVAEVDMRTIDVFTVKVALVLPAGTVTLERTLAAPLLL
Ga0137414_12223337	3300015051	Vadose Zone Soil	VAEITAEVETRTMDVLTRNVALVAPAGTSTLEGTLAAPLLLESEI*
Ga0137411_12662352	3300015052	Vadose Zone Soil	LLLYEAEILTEVEKKTMDVFTVKVALVAPAGTITLEGT
Ga0137411_12689081	3300015052	Vadose Zone Soil	VPLYEAEIVAEVEVGTTDVLTGKVALVAPAGTVSVEGTPAAPLSEDSR*
Ga0137405_12161161	3300015053	Vadose Zone Soil	MKTTEVLTVKVALVAPAGTITLEGTLAAAVLLLESVTCA
Ga0137405_12400472	3300015053	Vadose Zone Soil	LYEAEIVEEVEMSTIDVLTVKDARLAPAGTITLEGTRAAPLLLKSATIAPPA
Ga0137405_14212959	3300015053	Vadose Zone Soil	LYVAEIVAEVEMRTKDVFTVKVALVAPAGTITLEVL*
Ga0137420_11922631	3300015054	Vadose Zone Soil	LYEAEIVEEVEMSTIDVLTVKDAELAPAGITTLEGTLAAPLLLKSATMAPPAGAALVRFSLPCLWRI
Ga0137418_100104557	3300015241	Vadose Zone Soil	LYDAEIVAEVEKRTMDVFTVKVALVAPAGMNTLEGRRAAPLLLESATVAPPAGA
Ga0137418_106218411	3300015241	Vadose Zone Soil	LDEAEIVTEVETSTAEVRTVNVALVTPAGMVTLEGTLAA
Ga0137412_101115961	3300015242	Vadose Zone Soil	LYEAEIVAEVEMRTIGVLTGKVALLAPAGMKTPEGTLAAPLLLESATSAPPVNA
Ga0137412_103825351	3300015242	Vadose Zone Soil	LYWAEIVADVEIRTMDVLTVNEALLEPAGMNTVPGTLAAPLLLESVTCTPPAGAGALNV
Ga0137412_110359392	3300015242	Vadose Zone Soil	MVEKVEIKTMDVRTGKDARVAPAGTNTVEGTLAAPLLLESAMVDP
Ga0137409_111878741	3300015245	Vadose Zone Soil	LYWAEIVADVEIRTMDVLTVNEALLEPAGMNTVPGTLAAPLLLESVTCTPPAGAGALNVTVALE
Ga0066667_101420803	3300018433	Grasslands Soil	VLLYEAEIVAEVDTRTTDVLTVKVALVLPAGMVTLAGTLAAALLLES
Ga0066667_101451413	3300018433	Grasslands Soil	VAEVDTRTTDVLTVKVALVLPAGMVTLAGTLAAALLLES
Ga0193756_10495732	3300019866	Soil	MLLYEAEIVTEVETRTTEVVTANVALVAPAGTNTLEGTPAAPLLLESMTWAPPAGAGALS
Ga0179592_100621462	3300020199	Vadose Zone Soil	VAEITAEVETRTMDVLTRNVALVAPAGTSTLEGTLAAPLLLESEI
Ga0179592_101334612	3300020199	Vadose Zone Soil	LYEAEIVAEVEIRTKDVLIVKVALVAPAGTVTLDGT
Ga0179592_101357761	3300020199	Vadose Zone Soil	LYEAEIVAEVEMRTKDVLTVKVAVVAPAGTITLEGTLAAPLLLERKT
Ga0210407_100177624	3300020579	Soil	LYEAEIVEEVEIRTMDVFTVKLALVAPAGTNTLKGTLAAPLLLERRT
Ga0210407_103270251	3300020579	Soil	LYRAEIVEEVEIKTTDVLTVKDALLAPAGMNTVEGTLAAPLLLERATCTPPLGA
Ga0210407_110134521	3300020579	Soil	LYEAETVEDVEIRTKDVLTVKVALVAPAGAITLEGTLAAPLLLERKT
Ga0210399_108976843	3300020581	Soil	ETRTKDVLTVKVAPVAPAGTVTLDGTLAAALLLERKT
Ga0210404_100195424	3300021088	Soil	VAEVEMRTKDVFTVKVALVAPAGTITLEGTLAAPLSLERKT
Ga0210406_105691042	3300021168	Soil	LYEAEIVAEVETRTKDVLTVKVAPVAPAGTVTLDGTLAAALLLERKT
Ga0210406_105826711	3300021168	Soil	VEMRTKDVLIVKVALVAPAGTVTLDGTLAAPLLLERKT
Ga0210393_110158922	3300021401	Soil	LYVAEIVAEVEMRTKDVLIVKVALVAPAGTVTLDGTLAAPLLLERKT
Ga0210394_101247552	3300021420	Soil	VAEVEMTTKDVFTVKVALVAPAGTITLDGTLAAPLSLERKT
Ga0210402_116480172	3300021478	Soil	VAEIVADVEMRTKDVLTVKVALVAPAGTSTLEGTVAAPLLLERKT
Ga0210409_112222831	3300021559	Soil	VLLYEAEIVTEVETRTTEVLTANVALVAPAGTNTLEGTPATPLLLESMTCAPP
Ga0247694_10110292	3300024178	Soil	LYEAEIVAEVEIRTNDVLTVKVAVVAPAGTVTLDGTVAAPLLLERKT
Ga0247676_10032563	3300024249	Soil	LYRAEIVAEVEISTADVLTVKVALLAPAGMNTLAGTLAAPLLLERVICAPP
Ga0137417_14384961	3300024330	Vadose Zone Soil	LYEPEIETEVEKKTTDVSTLKLAVVAPAGTNTLEGTLAAPLLLESM
Ga0209234_12450391	3300026295	Grasslands Soil	MVAEVDMRTIDVFTGKVTLLLPAGTVTLEGTLAAALLLESVTCAPPA
Ga0209235_11114432	3300026296	Grasslands Soil	LYEAEIVAEVEMRTKDVLTVKVTLLAPAGTITLEGTLAAPLLLERKTWA
Ga0209235_11730581	3300026296	Grasslands Soil	LYEAEIVTVVVSITTVVLTVNVALVAPAGTVTLAGTRATEGSLL
Ga0209240_10458311	3300026304	Grasslands Soil	MFAEVVMRTKDVFTVKVALVAPAGTVTLGGTRAASLLLESVTIAPPAG
Ga0209267_10799902	3300026331	Soil	VLLYEAEIVAEVDTRTTDVLTVKVALVLPAGMVTLAGTLAAALLLESTTCAPP
Ga0257169_10554892	3300026469	Soil	VLLYEAEIVTEVGTRTAEVLTVNVALVAPAGTVTVEGTLAAPLLLASATCAPP
Ga0257158_10601081	3300026515	Soil	VLLYEAEIVTEVETRTTAVLTANVALVAPAGTNTLEGTPAAPLLLESMTCAPPAGAGPL
Ga0209807_11873651	3300026530	Soil	VLLYEAEIVAEVDTRTTDVLTVKVALVLPAGMVTLAGTLAAALLLESWLARASH
Ga0209157_10934931	3300026537	Soil	MRTKDVLTVKVTLLAPAGTITLEGTLAAPLLLERKTWALP
Ga0209648_100271551	3300026551	Grasslands Soil	LYEAEIVAEVDMKTAEVLTVKVALLAPAGTITLEGTLAAPLLLERNT
Ga0209648_107190621	3300026551	Grasslands Soil	VPLYEAEIVEEVEMSTIDVLTVKDAALAPAGTITLEGTLAAP
Ga0209648_107209412	3300026551	Grasslands Soil	VPLYEAEIVAEVEIRTKDVLTVKDALVAPAGTITLEGTLAAPLLLERRT
Ga0179593_11347512	3300026555	Vadose Zone Soil	VPLYEAEIVEEVEMSTIDVLTVKDAELAPAGITTLEAPWPLHCC
Ga0179587_100162841	3300026557	Vadose Zone Soil	VLLYEAEIVTDVETRTTEVLTANVALVAPAGTNTLEGTLAAPLLLESTTCAPP
Ga0179587_100454881	3300026557	Vadose Zone Soil	VRVVPLYEAEIVAEVEMRTKDVLTVKVAVVAPAGTITLEGTLAAPLLLERKT
Ga0179587_101434312	3300026557	Vadose Zone Soil	LYEAEIVEEVGMRTADVLILKVALLAPAGTVTLEGTLAAPLL
Ga0179587_102097192	3300026557	Vadose Zone Soil	VLLYEAEIVAEVDGSTVDVFTVKVALVLPSGTITLGGTVAA
Ga0179587_106918971	3300026557	Vadose Zone Soil	VLLYEAEIVTEVETRTTEVLTANVALVAPAGTNTLEGTLAAPLLLESTTCAPP
Ga0179587_107387441	3300026557	Vadose Zone Soil	MLLYEAEIVTEVETRTTEVLTANVALVAPARTNTLEGTPAAPLLLESMTCAPPAGAGPLS
Ga0208983_10134651	3300027381	Forest Soil	VLLYEAEIVTEVETRTMEVLTANVALVAPAGTNTLEGTLAAPLLLESMTCAPPAG
Ga0209735_10128854	3300027562	Forest Soil	LYEAEIVAEVEMRTKDVLTVKVALVAPAGTITLEGTLAAPLLLERKT
Ga0209076_10910502	3300027643	Vadose Zone Soil	VPLYEAEIVAEVGTRTADVFTLKAALLAPAGTVTLAGTLAAPLLLESM
Ga0209217_10773381	3300027651	Forest Soil	LYEAEIVAEVEMRTKDVLTVKVALVAPSGTITLEGTLAALLLL
Ga0208990_10160991	3300027663	Forest Soil	VLLYEAEIVPEVETRTAEVLTVNVALVAPAGTVTLESTLAAPLL
Ga0208981_11763802	3300027669	Forest Soil	VLLYEAEIVTEVETRTTEVLTANVALVAPAGTNTLEGTLAAPLLLESTTCA
Ga0209180_101608873	3300027846	Vadose Zone Soil	VAEVEMRTKDVLTVKLTLLAPAGTITLEGTLAAPLLLERKT
Ga0209701_102691401	3300027862	Vadose Zone Soil	MRTKDVLTVKVVLVAPAGTITLEGTVAALLLLERNT
Ga0209701_103118791	3300027862	Vadose Zone Soil	VPLYEAEIVEEVKMRTKDVLTVKVALVAPAGTITLEGTLAAPLLLESKT
Ga0209579_103870261	3300027869	Surface Soil	VPLHEAEIVAFVEKTTMLVLTGKIAVVAPAGTVTLEGTPAAELSLERRTCTPPPGA
Ga0209283_102375581	3300027875	Vadose Zone Soil	VPLYEAEIVEEVEMRTKDVLTVKVALVAPAGTITLEGTLAAPLLLESKT
Ga0209590_100862131	3300027882	Vadose Zone Soil	VAEVEMRTKDVLTVKVVLVAPAGTITLEGTVAAPL
Ga0209590_105074922	3300027882	Vadose Zone Soil	LYEAEIVAEVEMRTKDVLTVKLTLLAPAGTITLEGTLAAPLLLKRKT
Ga0209590_108510121	3300027882	Vadose Zone Soil	VPLYEAEIVEEVEMSTIDVLTVKDTLLAPAGTITLEGTLAAPLLLERET
Ga0209380_105599052	3300027889	Soil	LYEAEIAAEVETRTIDVLTVKVALVAPAGINTLEGTLAAPLLLMNWMSLSSVVR
Ga0209526_104242471	3300028047	Forest Soil	LYEAEIVAEVETRTTEVLTLNVALLAPAGTITLEGTLAAPLLLASMT
Ga0137415_100526935	3300028536	Vadose Zone Soil	LYEAEIVAEVEMRTKDVLTVKVALVAPAGTITLEGTLAAPLLLESKT
Ga0073994_100802334	3300030991	Soil	VLLYEAEIVTEVETRTTAVLTANVALVAPAGTNTLEG
Ga0170824_1258199841	3300031231	Forest Soil	MESVAERAVLLYDAVMVAEVEKRTADVLTVKEALVAPAGTVTLVGT
Ga0170818_1049303871	3300031474	Forest Soil	LYRAEIVADVEIRTMDVLTANDALLEPAGTNTVPGTLAAPLLLERVTCTPPAGAGALN
Ga0307469_107383931	3300031720	Hardwood Forest Soil	LYRAEIVADVEVRTGDVLTVNDALLAPAGMKTLPGTLAAPLLLERVTCTPPAGAGALNVTVPLED
Ga0307468_1009841522	3300031740	Hardwood Forest Soil	MRTKDVLTVKFALVAPAGTSTLEGTLAAPLLLERKT
Ga0307468_1019127951	3300031740	Hardwood Forest Soil	LAVRVLLPYEAEIWTEVEKRTMDVFTVNVALVAPAATVTLEGTLAVPGL
Ga0307475_103113951	3300031754	Hardwood Forest Soil	VAEVEMTTKDVFTVKVALVAPAGTITLEGTLAAPLSLERKT
Ga0307475_110276812	3300031754	Hardwood Forest Soil	VAVRVVELYEAEICTDVVMRTIDVVTVKVALVAPAGTVTLEGT
Ga0307475_112964161	3300031754	Hardwood Forest Soil	LYEAEIAAEVEMRTKDVVTVKVALVAPAGTITLEGTLAAPLLLERKT
Ga0307473_110514132	3300031820	Hardwood Forest Soil	MRTKDVLTVKVVLVAPAGTITLEGTVAAPLLLERKT
Ga0307478_105011612	3300031823	Hardwood Forest Soil	MTTKDVFTVKVALVAPAGTITLEGTLAAPLSLERKT
Ga0307479_100328455	3300031962	Hardwood Forest Soil	LYEAEIVTEVEMRTKDVLTVKVALVAPAGTITLEGTLAAPLLLERRT
Ga0307471_1004169701	3300032180	Hardwood Forest Soil	LYEAEIVAEVEKRTKDVLTVKVALVAPAGTVTLEGTLAAPLSLERKT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F028466

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences