Metagenome / Metatranscriptome Family F028247

Basic Information
Family ID	F028247
Family Type	Metagenome / Metatranscriptome
Number of Sequences	192
Average Sequence Length	52 residues
Representative Sequence	MKICLSLVHLTTISLLLLHMASAQADLPQARIVNLNVDPEQVVVLHLRPGYVS
Number of Associated Samples	162
Number of Associated Scaffolds	192

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.92 %
% of genes from short scaffolds (< 2000 bps)	92.19 %
Associated GOLD sequencing projects	155
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (99.479 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (11.979 % of family members)
Environment Ontology (ENVO)	Unclassified (23.438 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.708 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90. 1JGI12695J13573_10125992 2JGI12712J15308_101586912 3JGI26340J50214_101663971 4Ga0062385_109077142 5Ga0062386_1015857852 6Ga0066688_106870161 7Ga0070707_1009373081 8Ga0070730_100418671 9Ga0070664_1004897081 10Ga0066702_103855861 11Ga0070761_103527343 12Ga0070764_100892504 13Ga0066903_10000771016 14Ga0075017_1003531553 15Ga0075019_100168011 16Ga0075014_1009674191 17Ga0070765_1004258363 18Ga0099793_106483662 19Ga0066710_1012493371 20Ga0066709_1032932421 21Ga0116214_13287772 22Ga0116218_15322582 23Ga0116112_10843383 24Ga0116135_10691641 25Ga0116224_102320121 26Ga0116130_12789972 27Ga0116134_11773053 28Ga0116134_12164461 29Ga0099796_100614391 30Ga0074046_101668591 31Ga0074045_107316652 32Ga0126370_100195776 33Ga0126370_106023913 34Ga0136449_1038416961 35Ga0136449_1042258411 36Ga0136449_1046783091 37Ga0137392_112611321 38Ga0137393_105138653 39Ga0137388_115781071 40Ga0137380_114489491 41Ga0137387_112934371 42Ga0137386_110614062 43Ga0137360_113832482 44Ga0137361_104867221 45Ga0137390_117420892 46Ga0137398_110523872 47Ga0137397_100977541 48Ga0137397_102374173 49Ga0164298_106248113 50Ga0181533_11368361 51Ga0181521_103651522 52Ga0181538_102274941 53Ga0181534_101572681 54Ga0182012_101452083 55Ga0181519_102709571 56Ga0182038_114854402 57Ga0187801_104025731 58Ga0187848_101070311 59Ga0187819_101619561 60Ga0187819_103804791 61Ga0187819_105753772 62Ga0187879_105358041 63Ga0187847_103659193 64Ga0187847_104214453 65Ga0187817_105276661 66Ga0187778_104622413 67Ga0187781_107183351 68Ga0187816_100634413 69Ga0187865_12285401 70Ga0187878_12282051 71Ga0187804_105964581 72Ga0187805_102570553 73Ga0187810_101783933 74Ga0187872_103767261 75Ga0187882_12313321 76Ga0187882_12770622 77Ga0187885_102749432 78Ga0187857_103457211 79Ga0187869_100235511 80Ga0187867_101717331 81Ga0187875_106230902 82Ga0187883_100088389 83Ga0187862_107966631 84Ga0187871_100828101 85Ga0187858_109071001 86Ga0187771_118344161 87Ga0182025_10345102 88Ga0179592_100997601 89Ga0210395_101460691 90Ga0210401_115559241 91Ga0210404_108805161 92Ga0210406_110622342 93Ga0210405_100356762 94Ga0210396_113249342 95Ga0210385_109470071 96Ga0210384_114102932 97Ga0210391_107041331 98Ga0210391_113230312 99Ga0210402_115682361 100Ga0212123_100261501 101Ga0224562_10068112 102Ga0224558_10951361 103Ga0208193_10806132 104Ga0208691_11492021 105Ga0207699_113252141 106Ga0207664_113521672 107Ga0209055_12726301 108Ga0257155_10437422 109Ga0209648_107028581 110Ga0209648_107074611 111Ga0179587_111488991 112Ga0209218_11445621 113Ga0207761_11052442 114Ga0209003_10976192 115Ga0209329_10954692 116Ga0209221_10725203 117Ga0209625_10990121 118Ga0209007_11537881 119Ga0209333_10354571 120Ga0209910_100235002 121Ga0209773_103419901 122Ga0209580_101188181 123Ga0209517_101757143 124Ga0209517_103051031 125Ga0209166_100785643 126Ga0209169_103424391 127Ga0209275_102935411 128Ga0209488_109882031 129Ga0209006_103335061 130Ga0209526_102050973 131Ga0302149_10333841 132Ga0302198_105609581 133Ga0302231_104363141 134Ga0302157_104771722 135Ga0302154_105276131 136Ga0311369_113895401 137Ga0311352_112178222 138Ga0302276_103742482 139Ga0311339_100735501 140Ga0311348_105718101 141Ga0302274_103706581 142Ga0311370_111227593 143Ga0311357_117870061 144Ga0302309_106124761 145Ga0310039_102927742 146Ga0265762_10465091 147Ga0170834_1091671601 148Ga0302325_133293831 149Ga0265339_103736112 150Ga0302318_100898253 151Ga0302140_101365405 152Ga0265316_109633671 153Ga0302320_109805323 154Ga0302326_116247063 155Ga0302326_128818772 156Ga0310686_1159999802 157Ga0310686_1167476981 158Ga0310686_1168219103 159Ga0307469_111762363 160Ga0307478_111382211 161Ga0308175_1019052831 162Ga0310910_114489802 163Ga0306926_120738781 164Ga0311301_103503615 165Ga0311301_112779821 166Ga0307471_1035643352 167Ga0335079_103405641 168Ga0335079_105004731 169Ga0335079_110248521 170Ga0335078_103520514 171Ga0335078_104352481 172Ga0335078_112722331 173Ga0335080_100071091 174Ga0335080_102366801 175Ga0335081_107211783 176Ga0335081_108861331 177Ga0335081_114056943 178Ga0335081_119760152 179Ga0335081_123083152 180Ga0335074_100637259 181Ga0335071_102343041 182Ga0335071_116307451 183Ga0335072_107230211 184Ga0335076_100125701 185Ga0335076_101970371 186Ga0335076_103686951 187Ga0335076_112926101 188Ga0335073_104437901 189Ga0335073_106143853 190Ga0371488_0090211_1_135 191Ga0370483_0283383_386_568 192Ga0370515_0210851_702_827
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90. 1JGI12695J13573_10125992 2JGI26340J50214_101663971 3Ga0062386_1015857852 4Ga0066688_106870161 5Ga0070664_1004897081 6Ga0070761_103527343 7Ga0066903_10000771016 8Ga0075014_1009674191 9Ga0099793_106483662 10Ga0116224_102320121 11Ga0116130_12789972 12Ga0116134_12164461 13Ga0126370_100195776 14Ga0126370_106023913 15Ga0137380_114489491 16Ga0137386_110614062 17Ga0164298_106248113 18Ga0182038_114854402 19Ga0187778_104622413 20Ga0179592_100997601 21Ga0210405_100356762 22Ga0207664_113521672 23Ga0179587_111488991 24Ga0311369_113895401 25Ga0308175_1019052831 26Ga0310910_114489802
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52. 1Ga0187857_103457211 2Ga0062385_109077142 3Ga0066688_106870161 4Ga0070664_1004897081 5Ga0066903_10000771016 6Ga0075017_1003531553 7Ga0075014_1009674191 8Ga0099796_100614391 9Ga0126370_100195776 10Ga0136449_1038416961 11Ga0137393_105138653 12Ga0137388_115781071 13Ga0137386_110614062 14Ga0137360_113832482 15Ga0137361_104867221 16Ga0137397_100977541 17Ga0164298_106248113 18Ga0182038_114854402 19Ga0187819_101619561 20Ga0187819_103804791 21Ga0187819_105753772 22Ga0187817_105276661 23Ga0187778_104622413 24Ga0187805_102570553 25Ga0187872_103767261 26Ga0187771_118344161 27Ga0210405_100356762 28Ga0210391_113230312 29Ga0212123_100261501 30Ga0207699_113252141 31Ga0257155_10437422 32Ga0209221_10725203 33Ga0209007_11537881 34Ga0209333_10354571 35Ga0209275_102935411 36Ga0209488_109882031 37Ga0209006_103335061 38Ga0302318_100898253 39Ga0302326_116247063 40Ga0310686_1167476981 41Ga0307469_111762363 42Ga0308175_1019052831 43Ga0310910_114489802 44Ga0306926_120738781 45Ga0335080_100071091 46Ga0335080_102366801 47Ga0335081_123083152 48Ga0335076_100125701 49Ga0335076_112926101 50Ga0370483_0283383_386_568
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.57% β-sheet: 0.00% Coil/Unstructured: 65.43%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Pfam ID	Name	% Frequency in 192 Family Scaffolds
PF01464	SLT	88.02
PF07728	AAA_5	3.12
PF00589	Phage_integrase	1.56
PF00004	AAA	1.04
PF12728	HTH_17	1.04
PF14659	Phage_int_SAM_3	0.52
PF01266	DAO	0.52
PF00703	Glyco_hydro_2	0.52
PF00990	GGDEF	0.52
PF06262	Zincin_1	0.52

COG ID	Name	Functional Category	% Frequency in 192 Family Scaffolds
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.52
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	0.52

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.48 %
Unclassified	root	N/A	0.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.48 %
Unclassified	root	N/A	0.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.48 %
Unclassified	root	N/A	0.52 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	95.83 %
Unclassified	root	N/A	0.52 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	38.02 %
Unclassified	root	N/A	0.52 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.52 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.52 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	35.94 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	1.56 %
Unclassified	root	N/A	0.52 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.52 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	35.94 %
Unclassified	root	N/A	0.52 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	1.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.52 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	3.12 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1.56 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.52 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	2.08 %
Unclassified	root	N/A	0.52 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.52 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.52 %
Acidobacteriaceae bacterium TAA 166	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	0.52 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1.56 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.52 %
Granulicella rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	2.08 %
Unclassified	root	N/A	0.52 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.52 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001180\|JGI12695J13573_1012599	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300001471\|JGI12712J15308_10158691	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300003368\|JGI26340J50214_10166397	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300004080\|Ga0062385_10907714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	585	Open in IMG/M
3300004152\|Ga0062386_101585785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	546	Open in IMG/M
3300005178\|Ga0066688_10687016	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300005468\|Ga0070707_100937308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	831	Open in IMG/M
3300005537\|Ga0070730_10041867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3369	Open in IMG/M
3300005564\|Ga0070664_100489708	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1132	Open in IMG/M
3300005575\|Ga0066702_10385586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	854	Open in IMG/M

Showing 1 to 10 of 192 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.44%
Host-Associated	Host-Associated	1.56%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	24.48%
Plants	Host-Associated → Plants	1.56%
Terrestrial	Environmental → Terrestrial	73.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	22.40%
Peat	Environmental → Terrestrial → Peat	11.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.56%
Sediment	Environmental → Aquatic → Sediment	1.56%
Soil	Environmental → Terrestrial → Soil	62.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.52%

Habitat	Taxonomy	Distribution
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.52%
Loam	Environmental → Terrestrial → Soil → Loam	10.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.19%

Habitat	Taxonomy	Distribution
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.46%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.56%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.52%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.60%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.08%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.04%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.04%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.52%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.21%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.38%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.04%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.52%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.56%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.04%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.56%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.56%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001180	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M

Showing 1 to 10 of 162 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12695J13573_10125992	3300001180	Forest Soil	MKICLSLVHLTTISLLLLHIASAQSDLPQARIASLNLDPEQVVVLHLRPGYVSSVRVLEDVSSVV
JGI12712J15308_101586912	3300001471	Forest Soil	MKICLSLVHLTTASLLLLHIASAQAELPQARIVSLNLNPEQVVVLHLRPGYVSSVRVLEEVSS
JGI26340J50214_101663971	3300003368	Bog Forest Soil	MKNCLSLVYLITIGLLLPHIIFAQTELPQARIVNLNVDPEQVVVLH
Ga0062385_109077142	3300004080	Bog Forest Soil	MNKCLSLVHLTTVSLLLLHIASAQADLPLARIVSLNVDPEQVVVLHLRPGYVSSVRVLEEVSSVVLGD
Ga0062386_1015857852	3300004152	Bog Forest Soil	MNKCLSLVHLITICFLPFHMASAQTELPHARIVNLSIDPEQVVVLHLRPGYVSSVRVLEEVSSVVL
Ga0066688_106870161	3300005178	Soil	MKICLSLVHLITISFLLPQIAFSQAELPQARIVTLIVDPEQVVVLHLRTGYVSSVRVL
Ga0070707_1009373081	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNKCLSLVHLITICCFLPFHMASAQTELPQARIVNLSIDPEQVVVLHLRPGYVSSVRVLE
Ga0070730_100418671	3300005537	Surface Soil	MKICLSLLYLITIGLLLPHITLAQTELPQARIVNLNVDPEQVVVLR
Ga0070664_1004897081	3300005564	Corn Rhizosphere	MNRSLSLMHVITICLLPFQAIVAQTAMPQARIVTLSVNPGQAVVLHLRPGYVSSVRVLEEVSS
Ga0066702_103855861	3300005575	Soil	MKICLSLVHLITIGLLLPRITVAQTELPQARIVNLNVDPEQVVVLHLRPG
Ga0070761_103527343	3300005591	Soil	MNKCLSLVHLIAICFLPFYMALAQTELPQARIVNLSVDPEQVVVLHVRP
Ga0070764_100892504	3300005712	Soil	MNKCLSLVHLIAICFLPFYMASAQTELPQARIVNLSVDPEQVV
Ga0066903_10000771016	3300005764	Tropical Forest Soil	MNKCLSLVRLITIGFLFSHLVAAQAELPQPRVVNLSADPEQVLVLHLRPGYVCPFRRHR*
Ga0075017_1003531553	3300006059	Watersheds	MNKCLILVHVITVGVLALHMASAQTELPQARIVNLSIDPGQVVVLHVRPGYVSSVRVLEEVSSVVL
Ga0075019_100168011	3300006086	Watersheds	MKICLSLVHLTTAGLLLLHIASAQSDLPQGRIVSLNLDPEQVVVLHLRPGYVSSVRVLEEVSSV
Ga0075014_1009674191	3300006174	Watersheds	MNKCLSLVHLITISLLPLPLGSAQTELPQARIVNLSIAPDQVVVLHVRPGYVSSVRVLE
Ga0070765_1004258363	3300006176	Soil	MKICLSLVHLTTASLLLLHIASAQSDLPQARIVSLNLDPEQVVVLHLRPGYVSSVRV
Ga0099793_106483662	3300007258	Vadose Zone Soil	MKICLSLVHLITISFLLPGAALAQGELPQARIVGL
Ga0066710_1012493371	3300009012	Grasslands Soil	MKICLSLVHLTTASLLLVHIASAQSDLPQARIVSLNVDPEQVVVLHLRPGYVS
Ga0066709_1032932421	3300009137	Grasslands Soil	MKICLSLVHLITISFLLPQIALAQADLPQARIVTLN
Ga0116214_13287772	3300009520	Peatlands Soil	MNKCLSLVHLITICFLPFHMASAQTELPQARIVNLNVDPEQVVVLHVRPG
Ga0116218_15322582	3300009522	Peatlands Soil	MNKCLSLVHLITICFLPFHMASAQTELPQARIVNLNVDPEQVVVLH
Ga0116112_10843383	3300009636	Peatland	MKICLSLVHLTTASLLLLHIASAQSDLPQARIVSLTVDPEQVVVLHLRPGYVSSVRVLEEVSSV
Ga0116135_10691641	3300009665	Peatland	MKICLSLVHLITIGLLLPRITVAQTELPQARIVNLNVDPEQVVILHLRPGYVSSVRVL
Ga0116224_102320121	3300009683	Peatlands Soil	MKICLSLVHLTTAGLLLLHIASAQADLPQARIVSLNV
Ga0116130_12789972	3300009762	Peatland	MNKCLSLVHLITISLLPLPLASAQTELPQGRIVNLSIAPEQVVVLRVRPGYVSSVRVLEEVSSVVLGDPGAFKVE
Ga0116134_11773053	3300009764	Peatland	MKICLSLVHLITIGLLLPRITVAQTELPQARIVKLNVDPEQ
Ga0116134_12164461	3300009764	Peatland	MKICLSLVHLTTAGLLLLHMASAQSDLPQARIVSLNVDPEQVVVLHL
Ga0099796_100614391	3300010159	Vadose Zone Soil	MKICLSLVHLTMIGFLLPHMALAQADLPQARIVSLNVDPEQVV
Ga0074046_101668591	3300010339	Bog Forest Soil	MKICLSLLHLTTVSLLLLHIASAQSDLPQARIVSLNVDPEQVVVLHLRPGYVSSVRVLEE
Ga0074045_107316652	3300010341	Bog Forest Soil	MKICLSLVHLITIGLLLPRITVAQAELPQARIVNLNVDPEQVVVLHLRPGYVSSVRVLEE
Ga0126370_100195776	3300010358	Tropical Forest Soil	MNKRLSWVHLIATACFCPLLAAAQNELPQARIVNLGVDPEQVLVLHL
Ga0126370_106023913	3300010358	Tropical Forest Soil	MNKCLSLVHLITIGFLFSHLVAAQAELPQPRVVNLSAD
Ga0136449_1038416961	3300010379	Peatlands Soil	MKICLSLVHLTTASLLLLRIAPAQADLPQARIVSLSVDPEQVVVLHLRPGYVSS
Ga0136449_1042258411	3300010379	Peatlands Soil	MKICLSLVHLTTAGLLLLHIASAQADLPQARIVNLN
Ga0136449_1046783091	3300010379	Peatlands Soil	MKICLSLVHLTTAGLLLLHIASAQADLPQARIVNLNVDPEQVVVLHLRPGYVSSVRVLEEVS
Ga0137392_112611321	3300011269	Vadose Zone Soil	MKICLSLVHLITIGLLLPHISFAQTELPQARIVNLNVDPEQVVVLHLRPGYVSSVRV
Ga0137393_105138653	3300011271	Vadose Zone Soil	MKICLSLVHLITISFLLQQIALTQSELPQARIVTLNLDPEQVVVLHLRPGYVSSVRVLEEVSSVVL
Ga0137388_115781071	3300012189	Vadose Zone Soil	MNICLSLVHLITISLLLPQFALAQAELPQARIVSLNVDPEQVVVLHLRPGYVSSVR
Ga0137380_114489491	3300012206	Vadose Zone Soil	MNKCLSLVYLITICFLPFHIASAQTELPQARIVSLNVDPEQVV
Ga0137387_112934371	3300012349	Vadose Zone Soil	MKICLSLVHLTTASLLLLHIASAQSDLAQARIVSLNVDPEQVVVLHLRPGYVSSVR
Ga0137386_110614062	3300012351	Vadose Zone Soil	MNKCLSLVHLTTISLLPFHMASAQTELPQARIMNLSIDPE
Ga0137360_113832482	3300012361	Vadose Zone Soil	MKICLSLVHLTTASLLLLYIASAQSDLPQARIVNLNADPEQIVVLHLRPGYVSSV
Ga0137361_104867221	3300012362	Vadose Zone Soil	MKICLSLVHLITISFLLLHVAFAQAELPQARIVSLNVDPEQVVVLHLRPGYVSSVRVLDE
Ga0137390_117420892	3300012363	Vadose Zone Soil	MKICLSLVHLTTASLLLLHIASAQSDLPQARIVSLNVDPEQ
Ga0137398_110523872	3300012683	Vadose Zone Soil	MKICLSLVHLTTASLLLLYIASAQSDLPQARIVNLNADPEQIVVLHLRPGYVSSVRVLEEVSSV
Ga0137397_100977541	3300012685	Vadose Zone Soil	MNVCLSLVHLMTISLLLLQIAFAQAELPQARIVTLNVDPEQVVALHLRPGYVSS
Ga0137397_102374173	3300012685	Vadose Zone Soil	MKICLSLVHLITISFLLPQIAFAQGDLPQARIVTLNVDPEQVVVLHLRPGYVSSV
Ga0164298_106248113	3300012955	Soil	MNKCLSLVHLITTCFLISHLVLAQNELPQARIMNLIADPEQVTVL
Ga0181533_11368361	3300014152	Bog	MKICLSLVHLTTASLLLLGIASAPSDLPQARIVSLNVDPEQVVVLHLRPGYVSSVRVLEE
Ga0181521_103651522	3300014158	Bog	MKICLSLVHLTTVSLVLLHIASAQADLPQARIVSLNVDPEQVVVLHLRPGYVSSVRVLEE
Ga0181538_102274941	3300014162	Bog	MNKCLSLVHLITICFLPFHMASAQTELPQARIVNLSIDPEQVVVLHLRPGYVSSVRVLEEVSS
Ga0181534_101572681	3300014168	Bog	MKNCLSLVHLITAGFLLPHIAFAQTELPQARIVNLNV
Ga0182012_101452083	3300014499	Bog	MKNCLSLVYLITIGLLLPHIIFAQTELPQARIVNLNVDPEQVVVLHLRPG
Ga0181519_102709571	3300014658	Bog	MKNCLSLVHLITAGFLLPHIAFAQTELPQARIVNLNVDPEQVV
Ga0182038_114854402	3300016445	Soil	MNKCLSLVHFITIVLLRFNLAAAQNELPQARILNLSVDPAQVSVLHLRPGYVSSV
Ga0187801_104025731	3300017933	Freshwater Sediment	MKICLSLVHLTTAGLLLLHIASAQADLPQARIVSLNVDPEQVVVLHLRPGYVSSVRVLEEVS
Ga0187848_101070311	3300017935	Peatland	MNKCLSLVHLITICFLPFHMASAQTELPQARIVSLNVDPEQVVVLHLQPGY
Ga0187819_101619561	3300017943	Freshwater Sediment	MNKCLSLVHLITICFLPFRIASAQTELPQARIVKLSVDPEQVLVLHVRPGYVSSVRVLEE
Ga0187819_103804791	3300017943	Freshwater Sediment	MNKCLSLVHLITLGLSVTNVALAQTQLPQARIVNLSIDPEQVVVLHVRPGYVSSVRVL
Ga0187819_105753772	3300017943	Freshwater Sediment	MNKCLSLVHLITISLLPLYMALAQTELPQARIVNLSIDPERVVVL
Ga0187879_105358041	3300017946	Peatland	MNKCLSLVHLITTCFLPFYMASAQTELPQARIVNLSVDPEQVVVLHVRPGYVSSVRVLEEVSSVVL
Ga0187847_103659193	3300017948	Peatland	MKICLSLVHLTTAGLLLLHIASAQADLPQARIVSLNVDPEQVVVLH
Ga0187847_104214453	3300017948	Peatland	MNKCLSLVHLITICFLPFHLASAQTELPQARIVNLSI
Ga0187817_105276661	3300017955	Freshwater Sediment	MNKCLSLLHVITICSLPFRMASAQSELPHARIVNLSIDPEQVLVLHVRPGYVSSVRVLEEVSSVV
Ga0187778_104622413	3300017961	Tropical Peatland	MKICLALVHLITVSFLLSEIASAQADMPQARIVSLNVDPAQVLLLHLHPGYVSSVRVLE
Ga0187781_107183351	3300017972	Tropical Peatland	MNKCLNLVHLITICFLSFHMASAQTELPQARIVNLSIDPEQVVVLHVRPGYV
Ga0187816_100634413	3300017995	Freshwater Sediment	MNKCLSLVHLITICLLPFHMASAQTELPQARIVNLSID
Ga0187865_12285401	3300018004	Peatland	MKICLSLVHLTTASLLLLHIASAQSDLPQARIVSLTVDPEQVVVLH
Ga0187878_12282051	3300018005	Peatland	MKICLSLVHLTTIGFLLPHMALAQADLPQARIVSLN
Ga0187804_105964581	3300018006	Freshwater Sediment	MNKCLSLVHLITICFLPFHMASAQTELPQARIVNLSIDPEQVVVLHLRPGYVSSVR
Ga0187805_102570553	3300018007	Freshwater Sediment	MKICLSLVHLITICFLPFHMASAQTELPQARIVNLNVEPEQVVVLHLR
Ga0187810_101783933	3300018012	Freshwater Sediment	MNKCLSLVHLITICFLPFHMASAQTELPQARIVNL
Ga0187872_103767261	3300018017	Peatland	MKICLSLVHLTTAGLLLLHIASAQSDLPQARIVSLNVDPEQVVVLHLRPG
Ga0187882_12313321	3300018021	Peatland	MNKCLSLVHLITICFLPFHMALAQTELPQARIVNLSIDPEQVVVLHLRPGYVSSVRVLEEVSS
Ga0187882_12770622	3300018021	Peatland	MKICLSLVHLTTASLLLLHIATAQSDLPQARIVNLNVDPEQVVVLHLRPGYVSSVRVLE
Ga0187885_102749432	3300018025	Peatland	MNKCLSLVHLITICCFLPFHMASAQTELPQARIVNLSVDPEQVVVLHLRPGYVSSVRVLEEV
Ga0187857_103457211	3300018026	Peatland	MKICLSLVHLTTISLLLLHMASAQADLPQARIVNLNVDPEQVVVLHLRPGYVS
Ga0187869_100235511	3300018030	Peatland	MNKCLSLVHLITICFLPFHMASAQTELPQARIVNLSVDPEQVVVLHLRPGYVSSVRVLEEVSSV
Ga0187867_101717331	3300018033	Peatland	MKICLSLVHLTTASLLLLHIASAQSDLPQARIVNLNVDPEQVA
Ga0187875_106230902	3300018035	Peatland	MKICLSLVHLTTASLLLLHIASAQADLPQARIVNLSVDPEQIVVLHLRPGYVSSVRVLEEVSSV
Ga0187883_100088389	3300018037	Peatland	MKICLSLVHLTTVSLVLLHIASAQADLPQARIVSLNVDPEQVVVLHLRPG
Ga0187862_107966631	3300018040	Peatland	MNKCLSLVHLITICFLPFRMASAQSELPQARIVNLSIDPEQVVVLHVRPGYVSSVRVLE
Ga0187871_100828101	3300018042	Peatland	MNKCLSLVHLITICFLPFHMASAQTELPQARIVSL
Ga0187858_109071001	3300018057	Peatland	MKICLSLVHLTTASLLLLHIASAQSDLPQARIVNLNVEPEQVVVLH
Ga0187771_118344161	3300018088	Tropical Peatland	MNKCLSLVHLITVCLLPFGTAAAQSELPQARIVNLSVEPEQVLVLHLRPGYVSSVRVLEEVSSVV
Ga0182025_10345102	3300019786	Permafrost	MKICLSLVHLTTVSLVLLHIASAQADLPQARIVSLNVDPEQVVVLHLRPGYVSS
Ga0179592_100997601	3300020199	Vadose Zone Soil	MKICLSLVHLITISFLLPQIAFAQAELRQARIVTLNVDPEQV
Ga0210395_101460691	3300020582	Soil	MKICLSLVHLTTASLLLLHIASAQADLPQARIVSLNLDPEQVVVLHLRPGYVSSVRVLEE
Ga0210401_115559241	3300020583	Soil	MKICLSLVHLTTAALLLLHIASAQADLPQARIVSLNVDPEQVVVLHLRPGYVSSV
Ga0210404_108805161	3300021088	Soil	MKICLSLVHLTTAGLLLLHIASAQSDLPQARIVSLNVDP
Ga0210406_110622342	3300021168	Soil	MKICLSLVHLTTAGLLLLHIASAQADLPQARIVSLNVDPEQVVVLHLRPRYVS
Ga0210405_100356762	3300021171	Soil	MNKCLSLVLLITSCFLSFYTASAQTELPQTRIVNLSVEPEQVVVLHVRPGYVSSVRVLEEVSSVVLGDPGSFGSPGTSRGGEGPRGFRRR
Ga0210396_113249342	3300021180	Soil	MNKCLSLVHLITICLLSGMASAQTELPQARIVNLSIDP
Ga0210385_109470071	3300021402	Soil	MKICLSLVHLTTVSFLLLHIASAQSDLPQARIVNLNLDPEQVVVLHLRPGYVSSVRVLEE
Ga0210384_114102932	3300021432	Soil	MKICLSLVHLTTTSLLLLHIASAQSDLPQARIVSLNVDPEQV
Ga0210391_107041331	3300021433	Soil	MNRCLSLVHLITICYFLPFHMASAQTELPQARIVSLNVDPEQVVVLHLRPGYV
Ga0210391_113230312	3300021433	Soil	MNKCLSLVHLITICSLPFHMASAQTELPQARIVNLSIDSEQVLVLHVRPGYVSSVRVLGEVS
Ga0210402_115682361	3300021478	Soil	MKICLSLVHLITAGFLLPHITFAQTEPPQARIVNLNV
Ga0212123_100261501	3300022557	Iron-Sulfur Acid Spring	MNKCLSLVHLITSCLLPVYMASAQAELPQARIVNLSIDPEQVVVLHVRPGYV
Ga0224562_10068112	3300022733	Soil	MKICLSLVHLTTAGLLLLHIASAQADLPQARIVSLNVDPE
Ga0224558_10951361	3300023090	Soil	MKICLSLVHLTTASLLLLHIASAQSDLPQARIVSLNVDPEQVVVLHLRPGYVSSVRVTEEVSSVV
Ga0208193_10806132	3300025463	Peatland	MNKCLSLVHVITISLLSGMASAQTELPQARILNLSIDPEQV
Ga0208691_11492021	3300025612	Peatland	MNKCLSLVHLITICFLPFHMASAQTELPQARIVSLNIDPEQVVVLHLRPG
Ga0207699_113252141	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MNRSLSLLHVITICLMPFHVMLAQTGLPEARIVTLSVDPGQAVVLHLRQGYVSSVRVLEDVS
Ga0207664_113521672	3300025929	Agricultural Soil	MNKCLSLVHLITTSFLIPHLVLAQSELPQARIVNLI
Ga0209055_12726301	3300026309	Soil	MKICLSLVHLTTASVLLHIASAQSDLPQARIVSLNVDPEQVVVLH
Ga0257155_10437422	3300026481	Soil	MNKCLSLVHLITTCFLPLHMASAQSELPQARIVNLNVDPEQ
Ga0209648_107028581	3300026551	Grasslands Soil	MKICLSLVHLTTIGFLLPHMALAQADLPQARIVSLNVDPEQVVVLHLRPGYVSSV
Ga0209648_107074611	3300026551	Grasslands Soil	MKICLSLVHLTTASVLLLHIASAQSDLPQARIVSLNVDPEQVVVLHLRPGYVSSVRVL
Ga0179587_111488991	3300026557	Vadose Zone Soil	MNVCLSLVHLMTISLLLLQIAFAQAELPQARIVTLNVDPEQVVALHLRQATSVRYERWKR
Ga0209218_11445621	3300027505	Forest Soil	MKICLSLLHLTTASLLLLHIASAQSDLPQARIVNLNVDPEQVLVLHLRPGYVSSVRVLEEVSS
Ga0207761_11052442	3300027516	Tropical Forest Soil	MNKCLSLVHLITTCVLISHLVSAQNELPQARIVNLIADPEE
Ga0209003_10976192	3300027576	Forest Soil	MNKCLSLVHLITISLLPLLLASAQTELPQARIVSLNVDPEQVVVLHVRPGYV
Ga0209329_10954692	3300027605	Forest Soil	MKICLSLVHLTTISLLLLHIASAQSDLPQARIVSLNVDPEQVVVLHLRPGYV
Ga0209221_10725203	3300027609	Forest Soil	MNKCLSLVHLIAICFLPFHMASAQTELPQARIVSLNVDPEQVVVLHLRPGYVSSVRVLEEVS
Ga0209625_10990121	3300027635	Forest Soil	MKICLSLVHLTTIGLLLLHIASAQADLPQARIVSLNVDPEQVAVLHLRPGYVSSVRVLEEVS
Ga0209007_11537881	3300027652	Forest Soil	MKICLSLVHLTTASLLLLHIASAQAELPQARIVSLNLNPEQVVVLHLRPGYVSSV
Ga0209333_10354571	3300027676	Forest Soil	MNKCLSLVHVITISLLSGMASAQTELPQARILNLSIDPEQVVVLHVRPGYVSSIRVLEEVSSVVLGDP
Ga0209910_100235002	3300027803	Thawing Permafrost	MKICLSLVHLITAGFLLPQIAFAQTELPQARIVNLNVDPEQVVV
Ga0209773_103419901	3300027829	Bog Forest Soil	MKICLSLVHLTTAGLLLLHMASAQSDLPQARIVNLNVDPEQVVVLHLR
Ga0209580_101188181	3300027842	Surface Soil	MNKCLSLVHLTTICFLPFHMASAQTELPQARIVNLSIDPEQVVVLHLRPGYVSSVRVLEEVSSVVLG
Ga0209517_101757143	3300027854	Peatlands Soil	MNKCLSLVHLITICFLPFHMASAQTELPHARIVNLSIDPEQVVVLHLRPGYVSSVR
Ga0209517_103051031	3300027854	Peatlands Soil	MKICLSLVHLIAISFLLPHMALAQAELPQARIVSLNVDPEQVVVLHLRPGYVSSVRVLE
Ga0209166_100785643	3300027857	Surface Soil	MKICLSLLYLITIGLLLPHITLAQTELPQARIVNLNVDPEQVVVLRLRPG
Ga0209169_103424391	3300027879	Soil	MKICLSLVHLTTASLLLLHIASAQADLPQARIVSLNLDPEQVVVLHLRPGYVSSVRVLEEVSS
Ga0209275_102935411	3300027884	Soil	MNKCLNLVHLIASCLLPLHMAAAQAESPQARIVNLSVDPEQVVVLHVRPGYV
Ga0209488_109882031	3300027903	Vadose Zone Soil	MKICLSLVHLITISFLLPQIAFAQAEFPQARIVNLNADPEQIVV
Ga0209006_103335061	3300027908	Forest Soil	MNKCRSLVHLITICFLPARIAIAQTELPQARIVNLSIESEQVVVLHLRPG
Ga0209526_102050973	3300028047	Forest Soil	MKICLSLVHLTTAGLLLLHIASAQADLPQARIVSLNVDPEQVVVVHLRPGYVSSVRV
Ga0302149_10333841	3300028552	Bog	MKNCLSLVHLITIGLLLPRITVAQTELPQARIVNLNVDPEQVVVLH
Ga0302198_105609581	3300028765	Bog	MKICLSLVHLITIGLLLPRITVAQTELPQARIVKLNVDPE
Ga0302231_104363141	3300028775	Palsa	MKICLSLVHLITAGFLLPHIAFAQTELPQARIVNLNVDPEQVVVLHLRPGYVSSVRVLEEVSSV
Ga0302157_104771722	3300028813	Bog	MKNCLSLVYLITIGLLLPHIIFAQTELPQARIVNLNVDPEQVVVLHLRP
Ga0302154_105276131	3300028882	Bog	MKICLSLVHLITIGLLLPRITVAQTELPQARIVKLNVDPEQV
Ga0311369_113895401	3300029910	Palsa	MNKCLSLVHLITSFLLTVCMAWAQAELPQARIVNVSVA
Ga0311352_112178222	3300029944	Palsa	MKICLSLVHLITAGFLLPHIAFAQTELPQARIVNLNVDPEQVVVLHLRP
Ga0302276_103742482	3300029992	Bog	MKNCLSLVYLITIGLLLPHIIFAQTELPQARIVNLNVDPEQVVVLHL
Ga0311339_100735501	3300029999	Palsa	MKICLSLVHLTMIGLLLPHITLSQTELPQARIVNLNVDPEQVVV
Ga0311348_105718101	3300030019	Fen	MKICLSLVHLTTVSLLLLHIASAQADLPQARIVSLNVDPEQ
Ga0302274_103706581	3300030041	Bog	MKICLSLVHLITIGLLLPRITVAQTELPQARIVNLNVDPEQVVVLHLRPGYVSSVRVL
Ga0311370_111227593	3300030503	Palsa	MNKCLSLVHLITTCFLPFSMALAQTELPQARIVNL
Ga0311357_117870061	3300030524	Palsa	MKICLSLVHLITAGFLLPHIAFAQTELPQARIVNLNVDPEQVVV
Ga0302309_106124761	3300030687	Palsa	MKICLSLVHLITIGLLLPHITFAQTDLPQARIVNLNVDPEQVVILHLRPGYVSSVRVLEEVSSVVLGD
Ga0310039_102927742	3300030706	Peatlands Soil	MKICLSLVHLTTASLLLLHIASAQSDLPQARIVSLNVDPEQVVVLHLRPGYVSSVRVLEEVSSVVL
Ga0265762_10465091	3300030760	Soil	MKICLSLVHMTTISLLLLDIASAQADLPQARIVNLNVDPEQVVVLHLRPGYVSSVRVLEEVSSVV
Ga0170834_1091671601	3300031057	Forest Soil	MKICLSLVHLTTISLLLLDIASAQADLPQARIVNLNVDPEQVVVLHLRPGYV
Ga0302325_133293831	3300031234	Palsa	MKICLSLVHLITIGLLLPHVTVAQTELPQARIVNLNVDPEQVVVLHLRPGYVSSVRVLEEVS
Ga0265339_103736112	3300031249	Rhizosphere	MKICLSLVHLITAGFLLPHITVAQTELPQARIVNLNV
Ga0302318_100898253	3300031258	Bog	MKNCLSLVHLITIGLLLPRITVAQAELPQARIVNLNVDPEQVVVLHL
Ga0302140_101365405	3300031261	Bog	MKNCLSLVHLITIGLLLPRITVAQAELPQARIVNLNVDPEQVVVLHLRPGYVSS
Ga0265316_109633671	3300031344	Rhizosphere	MNKCLSLVHLITICFVAFHMASAQSELPQARIVNLSIDPQ
Ga0302320_109805323	3300031524	Bog	MKICLSLVHLITIGLLLPHITVAQTELPQARIVNLNVDPEQVVVLHLRPGYVSSVRVLEE
Ga0302326_116247063	3300031525	Palsa	MNKCLSLVHLITTCFLPFSMALAQTELPQARIVNLSVDPEQVVVLHVRPGYVSSVRVLEEVSSVV
Ga0302326_128818772	3300031525	Palsa	MKICLSLVHLITAGFLLPHIAFAQTELPQARIVNLNVDPEQVVVLHIRPGYVSSVRVLEEVSSVVLG
Ga0310686_1159999802	3300031708	Soil	MKICLSLVHLTTISLLLLHIASAQSDLPQARIVSLNVDPEQVVVLHLRPGYVSSVRVLEEVSSVV
Ga0310686_1167476981	3300031708	Soil	MNKCLSLVHLTTICFMAFHIASAQSELPQARIVNLSIDPQQVVVLHVRPGYVSSVRVLEEVSSVVLGDP
Ga0310686_1168219103	3300031708	Soil	MNKCLSLVHLTTICFLPFYMASAQTELPQARILNL
Ga0307469_111762363	3300031720	Hardwood Forest Soil	MSKCLSLVYLITICALPFPIAFAQTELPQARIVNLSIDPEQVV
Ga0307478_111382211	3300031823	Hardwood Forest Soil	MNKCLSLAHLITICLLPFRIASAQTELPQARIVNLSVDPEQVVVLRVRPGYVSSVRVLEE
Ga0308175_1019052831	3300031938	Soil	MNKCLRLVHLITTCFLVSHLVLAQSELPQARIMNLIADPGQVMMLHVRPGYVSSVRVLE
Ga0310910_114489802	3300031946	Soil	MNKCSSLMHLLAICFLISLLVSAQDELPQARIVNLSVDPEQVLVLHIQP
Ga0306926_120738781	3300031954	Soil	MNKCLSLMHLIASCFLISLLLSAQDELPQARIVNLSVDPEQVLVLHIRPG
Ga0311301_103503615	3300032160	Peatlands Soil	MNKCLSLLHVITICSLPFRMASAQTELPQARIVNLSIDPEQVVVLHLRPGYVSSVRVL
Ga0311301_112779821	3300032160	Peatlands Soil	MKICLSLVHLTTASLLLLHIASAQADLPQARIVNSNVDPEQVVVLHLRPGYVSSVRVLEEVSSV
Ga0307471_1035643352	3300032180	Hardwood Forest Soil	MKICLSLVHLTTASLLLLHIASAQSDLPQARIVSLNVDPEQVVVLHLRPGYVSSVRVLEE
Ga0335079_103405641	3300032783	Soil	MNKCLSLVHLITICLLPFHMASAQTELPQARIVNLSSDP
Ga0335079_105004731	3300032783	Soil	MNKCLSLVHLITICFLPFHMASAQTELPQARIVNLSIDPEQVVVLHL
Ga0335079_110248521	3300032783	Soil	MNKCLSLVHLITICLLPFHMASGQTELPQARIVNLSIDPEQVLVLHVRPGYVSSVR
Ga0335078_103520514	3300032805	Soil	MNKCLSLVHVITISLLSGMASGQTELPQARIVNLSIDPEQVLVLHVRPGYVSSVRVLEEV
Ga0335078_104352481	3300032805	Soil	MNKCLSLVHLITISLLPLPLASAQTELPQARIVNLSIA
Ga0335078_112722331	3300032805	Soil	MNKCLSLVHLITICLLPFHMASGQTELPQARIVNLSIDPEQVLVLHVRPGYVSSVRVLEE
Ga0335080_100071091	3300032828	Soil	MNKCLSLVHLITTCVLISHLVSAQNELPKARIVNLIADPEEVLVLHVRPGYVSSVRVLEE
Ga0335080_102366801	3300032828	Soil	MNKCLSLVHLITISLLPLLLASAQTELPQARIVSLNVDPEQVVVLHVRPGYVSSVRVLEEVSS
Ga0335081_107211783	3300032892	Soil	MNKCLSLVHLITISLLPLPLGSAQTELPQARIVNLSIAPEQVVVLHVRPGYVSSVR
Ga0335081_108861331	3300032892	Soil	MNKCLSLVHLITTCVLISHLVSAQNELPQARIVNLIA
Ga0335081_114056943	3300032892	Soil	MNKCLSLVHLITICLLPFHMASGQTELPQARIVNLSIDPEQVLV
Ga0335081_119760152	3300032892	Soil	MNKCLSLVHLITISLLPLPLGSAQTALPQARIVNLSIAPEQVVVLHVRPGYVSSVRVLEEVSSVV
Ga0335081_123083152	3300032892	Soil	MNKCLSLVHVITICLLPFHMAAAQTELPQARILSLNVDPEQVVVLHVRPGYVSSVRVLEEVSSV
Ga0335074_100637259	3300032895	Soil	MNKCLSLVHLITICLLPFHIASAQAELPQARIVNLSVDPEQVLVLHVRPGYVSSV
Ga0335071_102343041	3300032897	Soil	MNKCLSLVHLITISLLPLPLASAQTESPQARIVNLSIAPEQVVVLHVRPGYVSSVRVL
Ga0335071_116307451	3300032897	Soil	MNKCLSLVHLITISLLPLPLASAQAELPQARIVSLSIAPEQVVVLHVRPGYVSSVRVLEEVS
Ga0335072_107230211	3300032898	Soil	MNKCLSLVHVITISLLSGMASGQTELPQARIVNLSIDPEQVLVLHVRPGYVSSVRVLEE
Ga0335076_100125701	3300032955	Soil	MNKCLSLVHLIAICFLPFCKASAQTELPEARIVNLSVDPE
Ga0335076_101970371	3300032955	Soil	MNKCLSLVHLITICLLPFHMASGQTELPQARIVNLSIDPEQVLVLHVRPGYV
Ga0335076_103686951	3300032955	Soil	MNKCLSLVHLITISLLPLPLASAQTELPQARIVNLSIAPEQVVVLHVRPGYVSSV
Ga0335076_112926101	3300032955	Soil	MNKCLSLVHLITIGFLVSHLVSAQTELPQARIVNLSVDPEQVLVLHVRPGYVSSVRVLEEVSSVV
Ga0335073_104437901	3300033134	Soil	MNKCLSLVHLITISFLPFHIASAQTELPQARIVNLSIDPEQ
Ga0335073_106143853	3300033134	Soil	MNKCLSLVHLITICLLPFHMASAQTELPQARIVNLSSD
Ga0371488_0090211_1_135	3300033983	Peat Soil	MKICLSLVYLITIGLLLPHITFAQTELPQARIVNLNVNPEQVVVL
Ga0370483_0283383_386_568	3300034124	Untreated Peat Soil	MKICLSLVHLITIGLLLPHIALAQTELPQARIVNLNVDPEQVVVLHLRPGYVSSVRVLEE
Ga0370515_0210851_702_827	3300034163	Untreated Peat Soil	MKICLSLVHLITIGLLLPQVALAQTELPQARIVNLNVDPEQV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F028247

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences