Metagenome / Metatranscriptome Family F028246

Basic Information
Family ID	F028246
Family Type	Metagenome / Metatranscriptome
Number of Sequences	192
Average Sequence Length	49 residues
Representative Sequence	MDLVAGARAVDWDFTNWCYASGHDASDPDARRMFECLLAYARREGRAGLN
Number of Associated Samples	141
Number of Associated Scaffolds	192

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.72 %
% of genes near scaffold ends (potentially truncated)	63.54 %
% of genes from short scaffolds (< 2000 bps)	67.19 %
Associated GOLD sequencing projects	131
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Unclassified (70.312 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (13.542 % of family members)
Environment Ontology (ENVO)	Unclassified (27.604 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.729 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.87% β-sheet: 0.00% Coil/Unstructured: 55.13%
Feature Viewer

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Pfam ID	Name	% Frequency in 192 Family Scaffolds
PF13531	SBP_bac_11	3.65
PF06823	DUF1236	3.65
PF04392	ABC_sub_bind	1.56
PF05988	DUF899	1.56
PF02627	CMD	1.04
PF05235	CHAD	1.04
PF02518	HATPase_c	1.04
PF12833	HTH_18	1.04
PF00180	Iso_dh	0.52
PF00126	HTH_1	0.52
PF06035	Peptidase_C93	0.52
PF13467	RHH_4	0.52
PF00313	CSD	0.52
PF00082	Peptidase_S8	0.52
PF13417	GST_N_3	0.52
PF08241	Methyltransf_11	0.52
PF03411	Peptidase_M74	0.52
PF12697	Abhydrolase_6	0.52
PF00083	Sugar_tr	0.52
PF02195	ParBc	0.52
PF00378	ECH_1	0.52
PF05147	LANC_like	0.52
PF00848	Ring_hydroxyl_A	0.52
PF13302	Acetyltransf_3	0.52
PF01042	Ribonuc_L-PSP	0.52
PF12625	Arabinose_bd	0.52
PF01979	Amidohydro_1	0.52
PF13561	adh_short_C2	0.52
PF13356	Arm-DNA-bind_3	0.52
PF03401	TctC	0.52

COG ID	Name	Functional Category	% Frequency in 192 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.56
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	1.56
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.04
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.04
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	1.04
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	1.04
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	1.04
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.52
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.52
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	0.52
COG3770	Murein endopeptidase MepA (D-alanyl-D-alanine-endopeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.52
COG4403	Lantibiotic modifying enzyme	Defense mechanisms [V]	0.52

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
All Organisms	root	All Organisms	29.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
cellular organisms	root	All Organisms → cellular organisms	29.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.31 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.52 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.33 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.52 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.65 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.04 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.52 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.52 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.52 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.52 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.65 %
Mycoplana	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Mycoplana	1.04 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.52 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	0.52 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.52 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.65 %
Mycoplana dimorpha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Mycoplana → Mycoplana dimorpha	1.04 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.52 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	0.52 %
Xanthobacter autotrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → Xanthobacter autotrophicus	0.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.52 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.65 %
Mycoplana dimorpha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Mycoplana → Mycoplana dimorpha	1.04 %
Bosea sp. LC85	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. LC85	0.52 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.52 %
Xanthobacter autotrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → Xanthobacter autotrophicus	0.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.52 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.52 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_52477	All Organisms → cellular organisms → Bacteria → Proteobacteria	3134	Open in IMG/M
2199352025\|deepsgr__Contig_57295	Not Available	1184	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11135678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	637	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100193052	Not Available	659	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10052526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1056	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1024072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	854	Open in IMG/M
3300001976\|JGI24752J21851_1042035	Not Available	613	Open in IMG/M
3300002244\|JGI24742J22300_10002013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3243	Open in IMG/M
3300002459\|JGI24751J29686_10084870	Not Available	657	Open in IMG/M
3300002568\|C688J35102_120550574	Not Available	1170	Open in IMG/M
3300005093\|Ga0062594_101566151	Not Available	680	Open in IMG/M
3300005147\|Ga0066821_1006130	Not Available	771	Open in IMG/M
3300005169\|Ga0066810_10185649	Not Available	515	Open in IMG/M
3300005186\|Ga0066676_10963015	Not Available	569	Open in IMG/M
3300005328\|Ga0070676_10679152	Not Available	750	Open in IMG/M
3300005332\|Ga0066388_100968474	Not Available	1419	Open in IMG/M
3300005332\|Ga0066388_104404359	Not Available	717	Open in IMG/M
3300005332\|Ga0066388_104678000	Not Available	696	Open in IMG/M
3300005332\|Ga0066388_105423408	Not Available	646	Open in IMG/M
3300005332\|Ga0066388_107895364	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005332\|Ga0066388_108401999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300005332\|Ga0066388_108792832	Not Available	501	Open in IMG/M
3300005347\|Ga0070668_100984859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	757	Open in IMG/M
3300005363\|Ga0008090_10138955	Not Available	861	Open in IMG/M
3300005366\|Ga0070659_100633717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Mycoplana → Mycoplana dimorpha	921	Open in IMG/M
3300005437\|Ga0070710_10663335	Not Available	732	Open in IMG/M
3300005439\|Ga0070711_100904235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	753	Open in IMG/M
3300005439\|Ga0070711_101260949	Not Available	641	Open in IMG/M
3300005577\|Ga0068857_100207470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1787	Open in IMG/M
3300005616\|Ga0068852_100038319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4028	Open in IMG/M
3300005713\|Ga0066905_100973612	Not Available	747	Open in IMG/M
3300005713\|Ga0066905_101294928	Not Available	655	Open in IMG/M
3300005713\|Ga0066905_101715736	Not Available	577	Open in IMG/M
3300005764\|Ga0066903_100445998	All Organisms → cellular organisms → Bacteria	2159	Open in IMG/M
3300005764\|Ga0066903_101126949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1449	Open in IMG/M
3300005764\|Ga0066903_102021418	Not Available	1107	Open in IMG/M
3300005764\|Ga0066903_102681721	Not Available	966	Open in IMG/M
3300005764\|Ga0066903_102781360	Not Available	949	Open in IMG/M
3300005764\|Ga0066903_103289178	Not Available	873	Open in IMG/M
3300005764\|Ga0066903_103616669	Not Available	832	Open in IMG/M
3300005764\|Ga0066903_104029258	Not Available	787	Open in IMG/M
3300005764\|Ga0066903_104960024	Not Available	706	Open in IMG/M
3300005764\|Ga0066903_106692175	Not Available	599	Open in IMG/M
3300005764\|Ga0066903_107437438	Not Available	565	Open in IMG/M
3300005834\|Ga0068851_10043217	Not Available	2271	Open in IMG/M
3300006175\|Ga0070712_100162890	Not Available	1724	Open in IMG/M
3300006175\|Ga0070712_100461310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1059	Open in IMG/M
3300006606\|Ga0074062_12847330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1213	Open in IMG/M
3300006800\|Ga0066660_11083682	Not Available	636	Open in IMG/M
3300006845\|Ga0075421_100383710	All Organisms → cellular organisms → Bacteria → Proteobacteria	1691	Open in IMG/M
3300009100\|Ga0075418_11713294	Not Available	683	Open in IMG/M
3300009143\|Ga0099792_10043966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → Xanthobacter autotrophicus	2146	Open in IMG/M
3300009177\|Ga0105248_13373065	Not Available	507	Open in IMG/M
3300009545\|Ga0105237_12735789	Not Available	504	Open in IMG/M
3300009792\|Ga0126374_11723741	Not Available	521	Open in IMG/M
3300010043\|Ga0126380_11709571	Not Available	566	Open in IMG/M
3300010046\|Ga0126384_10065933	Not Available	2555	Open in IMG/M
3300010046\|Ga0126384_10262397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1402	Open in IMG/M
3300010322\|Ga0134084_10435297	Not Available	519	Open in IMG/M
3300010359\|Ga0126376_11344888	Not Available	737	Open in IMG/M
3300010360\|Ga0126372_10021328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3832	Open in IMG/M
3300010362\|Ga0126377_11746334	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300010362\|Ga0126377_12165849	Not Available	632	Open in IMG/M
3300010362\|Ga0126377_13226095	Not Available	527	Open in IMG/M
3300010396\|Ga0134126_11194321	Not Available	845	Open in IMG/M
3300010403\|Ga0134123_11794307	Not Available	667	Open in IMG/M
3300012200\|Ga0137382_10548708	Not Available	823	Open in IMG/M
3300012209\|Ga0137379_10048110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4112	Open in IMG/M
3300012212\|Ga0150985_117517857	Not Available	559	Open in IMG/M
3300012361\|Ga0137360_11780482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300012948\|Ga0126375_10822779	Not Available	738	Open in IMG/M
3300012957\|Ga0164303_11310915	Not Available	536	Open in IMG/M
3300012961\|Ga0164302_10870609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300012971\|Ga0126369_10534088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1236	Open in IMG/M
3300012971\|Ga0126369_10538425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1231	Open in IMG/M
3300012984\|Ga0164309_10042920	All Organisms → cellular organisms → Bacteria	2572	Open in IMG/M
3300015242\|Ga0137412_10761138	Not Available	715	Open in IMG/M
3300015371\|Ga0132258_10251985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4317	Open in IMG/M
3300015372\|Ga0132256_100137721	All Organisms → cellular organisms → Bacteria → Proteobacteria	2432	Open in IMG/M
3300015374\|Ga0132255_103577954	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300015374\|Ga0132255_104870084	Not Available	569	Open in IMG/M
3300016270\|Ga0182036_10882751	Not Available	732	Open in IMG/M
3300016294\|Ga0182041_10735936	All Organisms → cellular organisms → Bacteria → Proteobacteria	877	Open in IMG/M
3300016294\|Ga0182041_11633008	Not Available	596	Open in IMG/M
3300016294\|Ga0182041_12267241	Not Available	508	Open in IMG/M
3300016319\|Ga0182033_12023553	Not Available	525	Open in IMG/M
3300016341\|Ga0182035_10201890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1573	Open in IMG/M
3300016357\|Ga0182032_10964139	Not Available	727	Open in IMG/M
3300016371\|Ga0182034_11209146	Not Available	657	Open in IMG/M
3300016387\|Ga0182040_10129867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1763	Open in IMG/M
3300016387\|Ga0182040_10320743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1192	Open in IMG/M
3300016404\|Ga0182037_10810039	Not Available	808	Open in IMG/M
3300016404\|Ga0182037_11253112	Not Available	653	Open in IMG/M
3300016445\|Ga0182038_11350824	Not Available	638	Open in IMG/M
3300017792\|Ga0163161_10544886	Not Available	950	Open in IMG/M
3300018061\|Ga0184619_10010732	All Organisms → cellular organisms → Bacteria	3591	Open in IMG/M
3300018469\|Ga0190270_10385414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1291	Open in IMG/M
3300019269\|Ga0184644_1147604	Not Available	522	Open in IMG/M
3300020016\|Ga0193696_1138157	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300020580\|Ga0210403_10091318	All Organisms → cellular organisms → Bacteria → Proteobacteria	2464	Open in IMG/M
3300021082\|Ga0210380_10061440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. LC85	1631	Open in IMG/M
3300021178\|Ga0210408_10215166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1529	Open in IMG/M
3300021344\|Ga0193719_10355630	Not Available	609	Open in IMG/M
3300021405\|Ga0210387_10278693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1468	Open in IMG/M
3300021560\|Ga0126371_11403348	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300025900\|Ga0207710_10024177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2615	Open in IMG/M
3300025903\|Ga0207680_10044241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2617	Open in IMG/M
3300025904\|Ga0207647_10047635	All Organisms → cellular organisms → Bacteria → Proteobacteria	2665	Open in IMG/M
3300025914\|Ga0207671_10706044	Not Available	802	Open in IMG/M
3300025915\|Ga0207693_10287836	Not Available	1287	Open in IMG/M
3300025916\|Ga0207663_10835369	Not Available	735	Open in IMG/M
3300025916\|Ga0207663_10942922	Not Available	691	Open in IMG/M
3300025916\|Ga0207663_11184003	Not Available	615	Open in IMG/M
3300025916\|Ga0207663_11240854	Not Available	600	Open in IMG/M
3300025916\|Ga0207663_11345559	Not Available	575	Open in IMG/M
3300026374\|Ga0257146_1047747	Not Available	693	Open in IMG/M
3300027371\|Ga0209418_1003204	Not Available	2141	Open in IMG/M
3300028796\|Ga0307287_10194528	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300028809\|Ga0247824_11002595	Not Available	528	Open in IMG/M
3300028810\|Ga0307294_10324097	Not Available	564	Open in IMG/M
3300028811\|Ga0307292_10147029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	950	Open in IMG/M
3300028814\|Ga0307302_10608034	Not Available	543	Open in IMG/M
3300028880\|Ga0307300_10115822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300031226\|Ga0307497_10326070	Not Available	712	Open in IMG/M
3300031421\|Ga0308194_10371992	Not Available	514	Open in IMG/M
3300031546\|Ga0318538_10492558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300031640\|Ga0318555_10687130	Not Available	553	Open in IMG/M
3300031681\|Ga0318572_10074930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1871	Open in IMG/M
3300031682\|Ga0318560_10797217	Not Available	510	Open in IMG/M
3300031719\|Ga0306917_10830043	Not Available	724	Open in IMG/M
3300031740\|Ga0307468_100563878	Not Available	920	Open in IMG/M
3300031770\|Ga0318521_10686733	Not Available	621	Open in IMG/M
3300031805\|Ga0318497_10415789	Not Available	752	Open in IMG/M
3300031821\|Ga0318567_10773738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	544	Open in IMG/M
3300031833\|Ga0310917_10994130	Not Available	562	Open in IMG/M
3300031846\|Ga0318512_10052372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1825	Open in IMG/M
3300031897\|Ga0318520_10291103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	982	Open in IMG/M
3300031910\|Ga0306923_11723973	Not Available	646	Open in IMG/M
3300031912\|Ga0306921_10702474	Not Available	1162	Open in IMG/M
3300031912\|Ga0306921_11766067	Not Available	666	Open in IMG/M
3300031941\|Ga0310912_10804332	Not Available	726	Open in IMG/M
3300032025\|Ga0318507_10165527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	949	Open in IMG/M
3300032052\|Ga0318506_10322089	Not Available	685	Open in IMG/M
3300032076\|Ga0306924_10342265	All Organisms → cellular organisms → Bacteria → Proteobacteria	1715	Open in IMG/M
3300032076\|Ga0306924_10403707	Not Available	1564	Open in IMG/M
3300032261\|Ga0306920_103696100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	562	Open in IMG/M
3300034643\|Ga0370545_021366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Mycoplana → Mycoplana dimorpha	1092	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.77%
Host-Associated	Host-Associated	18.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.21%
Plants	Host-Associated → Plants	18.23%
Aquatic	Environmental → Aquatic	1.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.33%
Freshwater	Environmental → Aquatic → Freshwater	1.04%
Roots	Host-Associated → Plants → Roots	1.04%
Sediment	Environmental → Aquatic → Sediment	0.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.85%
Loam	Environmental → Terrestrial → Soil → Loam	21.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.08%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.04%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.52%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.08%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.04%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.04%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.52%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.52%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.52%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.08%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.04%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.04%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.04%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.04%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.04%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.52%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.52%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.52%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300002074	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1	Host-Associated	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300002459	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_00589080	2199352025	Soil	DWDFTTWCYASGRDATDSDARLMFECLLAYASRPEGRAGLN
deepsgr_00687870	2199352025	Soil	HQPITLAELIAGARAVEWDFTNWCYTSGYDASDPNARRMFECLLAYARREGCTGLN
ICChiseqgaiiFebDRAFT_111355441	3300000363	Soil	DWNFTYWCYASGHDAGDPNARNMFECLLDYARLDEGRAGLN*
ICChiseqgaiiFebDRAFT_111356781	3300000363	Soil	PPHEPITVTDLIAEARAVDWNFTYWCYASGHDAGDPNARNMFECLLDYARLDEGRAGLN*
INPhiseqgaiiFebDRAFT_1001930522	3300000364	Soil	ARAVDWDFVTWCYVSGYDASEPDARNMFECLLAYARREGRAGLH*
AF_2010_repII_A1DRAFT_100525261	3300000597	Forest Soil	DLIAEARAVDWDFTNWCYTSGYDASDPDARRMFECLLAFARREGRSGLH*
AP72_2010_repI_A100DRAFT_10240721	3300000837	Forest Soil	QSVTLMDLVAEARAVSWDFNDWCYASGYDASDPDARRIFECLLAYAKREGRAGLH*
JGI24752J21851_10420351	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	TLAELIAGARAVEWDFTNWCCTSGYDASDPNARRMFECLLAYARREGCTGLN*
JGI24748J21848_10314302	3300002074	Corn, Switchgrass And Miscanthus Rhizosphere	AVEWDFTNWCYTSGYDASDPNARRMFECLLAYARREGCTGLN*
JGI24742J22300_100020134	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	LAHQPITLAELIAGARAVEWDFTNWCXTSGYDASDPNARRMFECLLAYARREGCTGLN*
JGI24751J29686_100848701	3300002459	Corn, Switchgrass And Miscanthus Rhizosphere	LIAGARAVEWDFTNWCXTSGYDASDPNARRMFECLLAYARREGCTGLN*
C688J35102_1205505741	3300002568	Soil	LAHQPITLAELIAGARAVEWDFTNWCYTSGYDASDPNARRMFECLLAYARREGCTGLN*
Ga0062594_1015661512	3300005093	Soil	IWLTDLIAEARAVDWNFTYWCYASGHDASDPDARRMFECLLAYAMGEGRAGLH*
Ga0066821_10061301	3300005147	Soil	ELIAGARAVEWDFTNWCYTSGYDASDPNARRMFECLLAYARREGCTGLN*
Ga0066810_101856491	3300005169	Soil	WSPPRTELAHQPITLAELIAGARAVEWDFTNWCYTSGYDASDPNARRMFECLLAYARREGCTGLN*
Ga0066676_109630152	3300005186	Soil	ADWPPSQKAPLTDLIAEARAIDWDFTNWCYVTGYDVSDPDARRMFECLLAYAKLEGRAGLN*
Ga0070676_106791521	3300005328	Miscanthus Rhizosphere	MDLVAGARAVDWDFTTWCYASGHDDTDPEARLMFECLLAYASRPEGRA
Ga0066388_1009684741	3300005332	Tropical Forest Soil	ADLVSEARAVHWDFTNWCDASGYDASDPTARCMFECLLAYTRSEGGAGLH*
Ga0066388_1044043593	3300005332	Tropical Forest Soil	TLTDLVAGARAVEWDFTTWCYVSGHDASDPGARHMFECLLAYARRREGRAGLN*
Ga0066388_1046780002	3300005332	Tropical Forest Soil	MDLVAEARAVDWDFTTWCYVSGHNANDPDVRNMFECLLAYA
Ga0066388_1054234081	3300005332	Tropical Forest Soil	PITIVDLVTEARAVDWDFSNWCYASGYDTSDPTARRMFECLLAYARSEGGAGLH*
Ga0066388_1078953642	3300005332	Tropical Forest Soil	LIPLTDLVAEARAVEWDFATWCYVSGYDASDPDARNMFECLLAYARREGRTG*
Ga0066388_1084019991	3300005332	Tropical Forest Soil	DWPPCEPITLTELVAEARAVEWDFTNWCYTSGYDAGDPDARRMFERLLAHARREGGAGLH
Ga0066388_1087928322	3300005332	Tropical Forest Soil	ARAVEWDFTNWCYTSGYDASDPDARRTFECLLAYARREGGAGLN*
Ga0070668_1009848591	3300005347	Switchgrass Rhizosphere	MTLTELITEARAVDWDFAHWCYASGHDASDPDAHNMFECLLAYARREGRAGLH*
Ga0008090_101389551	3300005363	Tropical Rainforest Soil	LTDLVAEARAADWDFSSWCHASGYDASDPDARRMFECLLAYARLEGRTGLH*
Ga0070659_1006337171	3300005366	Corn Rhizosphere	WPPHQSPIMDLVACARAVDWDFTTWCYASGHDTSDPDTRNMFECLLAYASRPEGRVGLN*
Ga0070710_106633352	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LAHQPITLAELIAGARAVEWDFTNWCCTSGYDASDPNARRMFECLLAYARREGCTGLN*
Ga0070711_1009042351	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LTDLVDEARALDWDFTYWCYASGYDAGDPDARRAFERLLAYARHEGRAGMN*
Ga0070711_1012609491	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	TLTDLVDEARALDWDFTYWCYASGYDAGDPDARRTFERLLAYARREGRAGLS*
Ga0070672_1001793654	3300005543	Miscanthus Rhizosphere	WCYTSGYDVSDTNARRMFECLLAYARREGCTGLN*
Ga0070693_1003032891	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	EWDFTNWCCTSGYDASDPNARRMFECLLAYARREGCTGLN*
Ga0068857_1002074701	3300005577	Corn Rhizosphere	LAHQPITLAELIAGARAVEWDFTNWCCTSGYDASDPNARRMFECLLAYARREG
Ga0068852_1000383192	3300005616	Corn Rhizosphere	LAHQPITLAELIAGARAVEWDFTNWCYTSGYDASDPNARRMFECLLAYARCEGCTGLN*
Ga0066905_1009736121	3300005713	Tropical Forest Soil	VDWDFATWCYVSGHDASDPDARTMFECLLAYARREGRAGLH*
Ga0066905_1012949282	3300005713	Tropical Forest Soil	MDLVAEARAVDWDFATWCYVSGHDASDPDARTMFDCLLAYARREGRTG*
Ga0066905_1017157363	3300005713	Tropical Forest Soil	AVEWDFTTWCYVSGHDASDPGARHMFECLLAYARRREGRAGLN*
Ga0066905_1018434692	3300005713	Tropical Forest Soil	SWCYASGYDASDPDARSMFECLLAYARREGRAGLN*
Ga0066903_1004459982	3300005764	Tropical Forest Soil	TVTDLIAEARAVDWDFTNWCYTSGYDASDPDARRTFECLLAYARREGGAGLN*
Ga0066903_1011269494	3300005764	Tropical Forest Soil	VTDLIAEARAVDWDFTNWCYTSGYDASDPDARRMFECLLAFARREGRSGLH*
Ga0066903_1013003061	3300005764	Tropical Forest Soil	WDFAYWCYASGYDASDPDAHRMFERLLAYARREGGAGLH*
Ga0066903_1020214181	3300005764	Tropical Forest Soil	LLDVDWPPGEPITVTDLIAEARAVEWDFTNWCYTSGYDASDPDARRTFECLLAYARREG
Ga0066903_1026817212	3300005764	Tropical Forest Soil	MDLVAEARAVDWDFATWCYVSGHDAADPDARNMFECLLAYAKREGRAGLN*
Ga0066903_1027813602	3300005764	Tropical Forest Soil	MDLVAEARAVDWDFATWCYVSGYDASAPDARNMFECLLAYARREGRAGLH*
Ga0066903_1032891782	3300005764	Tropical Forest Soil	DWPPRQPITIADLVTEARAVDWDFSNWCYASGYDASDPAARRMFECLLAYARSEGRAGLH
Ga0066903_1036166691	3300005764	Tropical Forest Soil	ADLVTEARAVDWDFSAWCHASGYDASDPDARRMFECLLAYARLEGRAGLH*
Ga0066903_1040292582	3300005764	Tropical Forest Soil	EARGADWDFTNWCYASGYDASDADARRVFERLLAYARREGRAGLN*
Ga0066903_1046083831	3300005764	Tropical Forest Soil	WDFTNWCYTSGYDASDPDARRTFECLLAYARREGGAGLN*
Ga0066903_1049600241	3300005764	Tropical Forest Soil	AEARAADWDFSSWCYASGYDASDLDARSMFECLLAYARLEGRAGSH*
Ga0066903_1066921751	3300005764	Tropical Forest Soil	WPTRQPITLTDLVAEARALDWDFTNWCCASGHDASDPDARRMFECLLAYARREGRAGLH*
Ga0066903_1074374381	3300005764	Tropical Forest Soil	AEARAVDWDFTNWCYTSGYDASDPHARHMFECLLAYARREGGAGLN*
Ga0066903_1076249101	3300005764	Tropical Forest Soil	DFTNWCCASGYDASDPDASRMFECLLAYARREGRAGLN*
Ga0068851_100432173	3300005834	Corn Rhizosphere	LAHQPITLAELIAGARAVEWDFTNWCYTSGYDVSDPNARRMFECLLAYARREGCTGLN*
Ga0070717_116349102	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FTYWCYASGYDAGDPDARRAFERLLAYARHEGRAGMN*
Ga0075365_101382251	3300006038	Populus Endosphere	NWCYVSGYDASDPDARHMFECLLAYARREGRAGLH*
Ga0075364_103180553	3300006051	Populus Endosphere	WDFTHWCYVSGYDASDPDARNMFECLLAYASVEGRAGLH*
Ga0070712_1001628901	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VAEARAIDWDFATWCCVSGHDANDPEARRMFEWLLAYARREGRAGLH*
Ga0070712_1004613101	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LVAEARAIDWDFTTWCCVSGHDASDPEARRMFECLLAYARREGRAGLH*
Ga0074062_128473301	3300006606	Soil	IASARAADWDFTKWCYASGYDTSDPEARRMFERLLAYAKREGGAGLN*
Ga0066660_110836821	3300006800	Soil	DLVAEARAVDWNFTDWCYASGYDASDPDAHRMFERLLAYARREGRAGLN*
Ga0075428_1001704876	3300006844	Populus Rhizosphere	VEWDFTGWCSASGYDASHPDARRLFECLLAYAKREGRAALN*
Ga0075421_1001680322	3300006845	Populus Rhizosphere	VPCIADWDFASWCYASGYDANDPDARLMFECLLAYARGEGRAGLH*
Ga0075421_1003837105	3300006845	Populus Rhizosphere	AGARAVDWDFTTWCYASGYDASDPDARNMFECLLAYARREGRAGLN*
Ga0074063_141108701	3300006953	Soil	FTNWCCASGYDASDPDARRVFECLLAYARREGRAGLN*
Ga0075418_117132941	3300009100	Populus Rhizosphere	MDLIAEARAVDWDFTNWCYASGYDDSDPDARRMFECLLAYAM
Ga0066709_1021713311	3300009137	Grasslands Soil	AVDWDFTYWCYASGCDASDPDAHRMFERLLAYARREGRAGLN*
Ga0099792_100439663	3300009143	Vadose Zone Soil	PPHQPVMLMELVAEARAIDWDFTTWCCVSGHDASDPEARRMFECLLAYARREGRAGLH*
Ga0111538_128336722	3300009156	Populus Rhizosphere	TTWCYASGHDANDPDARLMFECLLAYARREGRAGVN*
Ga0105248_133730651	3300009177	Switchgrass Rhizosphere	IAELVAEARAAEWDFTNWCHASGYDPSDQDAGPMFECLLAYAMGEGRAGLH*
Ga0105237_127357891	3300009545	Corn Rhizosphere	VGGLAAREPIWLTDLIAEARAVDWNFTYWCYASGHDASDPNARRMFECLLAYARLDEGRAGLN*
Ga0126374_117237411	3300009792	Tropical Forest Soil	WLPQQLVTIANLVTEARAVDWDFDTWCYASGYDASDPAARRMFECLLAYARREGRAGLH*
Ga0126380_117095711	3300010043	Tropical Forest Soil	MTIEDLVAEARAAEWDFTGWCYASGYDASDPDARLFFNCLLAYARREGRAALN*
Ga0126384_100659332	3300010046	Tropical Forest Soil	MDLVAEARAVSWDFNDWCYASGYDASDPDSRHMFECLLAYAKREGRAGLH*
Ga0126384_102623971	3300010046	Tropical Forest Soil	IAAARAADWDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN*
Ga0126373_128202652	3300010048	Tropical Forest Soil	WDFTNWCHASGYDTSDPEARRMFECLLAYAKREGRAGLN*
Ga0134084_104352972	3300010322	Grasslands Soil	MLTELVAEARAIDWDFATWCCVSGHDANDPEARRMFEWLLAYARREGRAGLH*
Ga0126376_113448881	3300010359	Tropical Forest Soil	VAEARGGGWDFTNWCYASGYDASDPGSRHVFECLLDYARREGRAGLH*
Ga0126372_100213284	3300010360	Tropical Forest Soil	MDLVAEARAVSWDFNDWCYASGYDASDPDARHMFECLLAYAKREGRAGLH*
Ga0126378_106794364	3300010361	Tropical Forest Soil	AADWDFTNWCYASGYDASDPDARRMFERLLAYARREGRAGLN*
Ga0126378_113938281	3300010361	Tropical Forest Soil	GDWDFDTWCYASGHDATDPSARRMFERLLAYAISEGGPGLH*
Ga0126377_117463341	3300010362	Tropical Forest Soil	LMDLVAGARAVEWDFTHWCYASGHDASDPDARLMFECLLAYARREGRAGLH*
Ga0126377_121658491	3300010362	Tropical Forest Soil	AHQPITIWDLVAEARAADWDFTDWCYASGYDASDPGSLHVFECLLDYARHEGRAGLH*
Ga0126377_132260953	3300010362	Tropical Forest Soil	HQTITLTDLVAEARAADWDFSSWCYASGYDASDPDARRMFECLLAYARLEGRAGLH*
Ga0126379_110178932	3300010366	Tropical Forest Soil	FTYWCYASGYDASDPDAHRMFERLLAYARREGRAGLN*
Ga0126381_1033784961	3300010376	Tropical Forest Soil	NWCYASGYDTSDPTARRMFECLLAYARSEGAGLH*
Ga0126381_1048859331	3300010376	Tropical Forest Soil	DWDFTNWCCASGYDASDPDARRMFECLLTYAMREGRAGLH*
Ga0134126_111943212	3300010396	Terrestrial Soil	MLEELVAEARAIDWDFATWCCASGHDASDPEARRMFERLLAYARREGRAGLH*
Ga0134123_117943072	3300010403	Terrestrial Soil	PVMLTELVAEARAIDWDFATWCCASGHDASDPEARRMFERLLAYARREGRAGLH*
Ga0137382_105487081	3300012200	Vadose Zone Soil	DWPPRQTITITDLIAEARAADWDFTNWCYASGYDISDPEARRMFECLLAYARREGRAGLH
Ga0137379_100481101	3300012209	Vadose Zone Soil	MDLVAGARAVDWDFTNWCYASGHDASDPDARRMFECLLAYARREGRAGLN*
Ga0150985_1175178572	3300012212	Avena Fatua Rhizosphere	AVEWDFTTWCYASGHDAGNPDARRMFECLLAYARLDEGRVGLH*
Ga0137360_117804822	3300012361	Vadose Zone Soil	DLVAEARAVDWDFTNWCYTSGYDAGDPDARRMFACLLAYARREGGAGLN*
Ga0126375_108227793	3300012948	Tropical Forest Soil	VAEARAADWDFTNWCLASGYDTSDPDARTMFECLLAYARREGRAGLN*
Ga0164303_113109151	3300012957	Soil	QSASIMDLVACARAVDWDFTTWCYASGHDAGDPDARRMFECLLAYARLDEGRAGLN*
Ga0164302_108706091	3300012961	Soil	LTDLIAEARAVEWDFTNWCHASGHDATDPDARRMFECLLAYARLDEGRAGLN*
Ga0126369_105340881	3300012971	Tropical Forest Soil	LIAEARAADWDFTNWCYASGYDTGDPEARRMFECLLAYAKREGRAGLN*
Ga0126369_105384251	3300012971	Tropical Forest Soil	IAEARGADWDFTNWCYASGYDASDADARRVFERLLAYARREGRAGLN*
Ga0164309_100429206	3300012984	Soil	ELAHQPITLAELIAGARAVEWDFTNWCYASGYDASDPNARRMFECLLAYARRKGCTGLN*
Ga0137412_107611381	3300015242	Vadose Zone Soil	MELVAEARAIDWDFTTWCCVSGHDASDPEARRMFECLLAYASRPE
Ga0132258_102519857	3300015371	Arabidopsis Rhizosphere	MELVACARAVDWDFTTWCYASGHDAADKDARLMFECLLAYASRPEGRAGLN*
Ga0132256_1001377214	3300015372	Arabidopsis Rhizosphere	LVAEARAVEWDFTGWCYASGYDASNPDARRFFDCLLAYARHEGRAALN*
Ga0132256_1013788002	3300015372	Arabidopsis Rhizosphere	HAFTGLIAEARAVDWDFTSWCNASGYDATDPDARHFFECLLAYARCEGRAGLN*
Ga0132256_1018487252	3300015372	Arabidopsis Rhizosphere	WCYASGYEAGDPHARSMFERLLAYARREGRAGLN*
Ga0132255_1035779543	3300015374	Arabidopsis Rhizosphere	LMDLIAEARAVEWDFTTWCYASGHDAGNPDARRMFECLLAYARLDEGRVGLH*
Ga0132255_1048700841	3300015374	Arabidopsis Rhizosphere	VTEARAADWNFTNWCCASGYDVSDPDARRMFEWLLAYARREGRAGLH*
Ga0182036_108827511	3300016270	Soil	WPPRQTITITDLIAEARTTDWDFNNWCYASGHDASDPDARRMFECLLAYARREGRSGLH
Ga0182041_107359361	3300016294	Soil	PRQPITIADLVTEARAVDWDFSNWCYVSGYDASDPAARCMFECLLA
Ga0182041_116330081	3300016294	Soil	LVAEARAADWDFTNWCYASGYDASDPGSRHVFECLLDYARREGRAGLH
Ga0182041_122672412	3300016294	Soil	WPPRQTITITDLIAEARGVDWDFANWCYASGYHASDVDARRMFERLLAYARREGRAGLN
Ga0182033_120235532	3300016319	Soil	AEAPAADWDFTDWCYASGYDASDPGSRHVFECLLDYARREGRAGLH
Ga0182035_102018903	3300016341	Soil	TLTDLVAEARAVDWDFTNWCYTSGYGAGDPDARRMFECLLAYARREGGAGLN
Ga0182032_109641391	3300016357	Soil	TITDLIAEARAADWDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0182034_112091462	3300016371	Soil	EGWPPRQTITITDLIAEARAADWDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGL
Ga0182040_101298673	3300016387	Soil	EARAADWDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0182040_103207433	3300016387	Soil	EARAADWDFTNWCYASGYDTSDPEARRMFECLLAHAKREGRAGLN
Ga0182037_108100391	3300016404	Soil	ITDLIAEARAADWDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0182037_112531121	3300016404	Soil	RQTITITDLIAEARAADWDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0182038_113508241	3300016445	Soil	ITDLIAEARAADWDFTNWCYASGYDTSDPEARRIFECLLAYAKREGRAGLN
Ga0163161_105448861	3300017792	Switchgrass Rhizosphere	FTNWCHASGHDATDPDARRMFECLLAYARLDEGRVGLN
Ga0190266_111164221	3300017965	Soil	DWDFTIWCHASGHDATDAHAHLMFECLLAYASRPEGRAGLN
Ga0184619_1001073210	3300018061	Groundwater Sediment	VAWSPPRTELAHQPITLAELIAGARAVEWDFTNWCYASGYDASDPNARRMFECLLAYARREGCTGLN
Ga0190270_103854143	3300018469	Soil	ADWPPHQSPIMDLVACARAVDWDFTTWCHASGHDATDKDARLMFECLLAYASRPEGRAGL
Ga0184644_11476041	3300019269	Groundwater Sediment	MTLADLIAEARAVDWDFAQWCYVSGHDANDSDARNMFECLLAYASSEGRAGLH
Ga0193696_11381572	3300020016	Soil	PTIMDLVAGARAVDWDFTTWCHASGRNATDSDARLMFDCLLAYASRPEGRAGLN
Ga0210403_100913183	3300020580	Soil	MLTELVAEARAIDWDFATWCCVSGHDASDPEARRMFECLLAYARREGRAGLH
Ga0210380_100614401	3300021082	Groundwater Sediment	MTLTELITEARAVDWDFAHWCYANGHDASDPDARNMFERLLAYA
Ga0210408_102151661	3300021178	Soil	DLVAEARALDWDFTYWCYASGYDAGDPDARRMFERLLAYARREDRAGLN
Ga0193719_103556301	3300021344	Soil	AHQQITLAELIAGARAVEWDFTNWCYASGYDASDPSARRMFECLLPYARREGCTGLN
Ga0210387_102786935	3300021405	Soil	DWPPHQPVMLTELVAEARALDWDFTTWCCVSGHDASDPEARRMFERLLAYARREDRAGLH
Ga0126371_114033482	3300021560	Tropical Forest Soil	DLIAEARAVDWDFTNWCYATGYDASDPDARRMFECLLAYATREGGAGLN
Ga0207642_108453051	3300025899	Miscanthus Rhizosphere	WDFTIWCHASGHDATDAHAHLMFECLLAYASRPEGRAGLN
Ga0207710_100241777	3300025900	Switchgrass Rhizosphere	VAWSPPRTELAHQPITLAELIAGARAVEWDFTNWCYTSGYDASDPNARRMFECLLAYARREGCTGLN
Ga0207680_100442413	3300025903	Switchgrass Rhizosphere	ACARAVDWDFTTWCYASGHDATDTHAHLMFECLLAYASRPEGRAGLH
Ga0207647_100476356	3300025904	Corn Rhizosphere	QPITLAELIAGARAVEWDFTNWCCTSGYDASDPNARRMFECLLAYARREGCTGLN
Ga0207671_107060441	3300025914	Corn Rhizosphere	GARAVEWDFTNWCCTSGYDASDPNARRMFECLLAYARREGCTGLN
Ga0207693_102878363	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VAEARAIDWDFTTWCCVSGHDASDPEARRMFECLLAYARREGRAGLH
Ga0207663_108353691	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PTTLTDLVDEARALDWDFTYWCYASGYDAGDPDARRTFERLLAYARREGRAGLS
Ga0207663_109429221	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LSELIAGARAVEWDFTNWCYTSGYDASDPNARRMFECLLAYARREGCTGLN
Ga0207663_111840033	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VAEARAIDWDFATWCCASGHDASDPEARRMFERLLAYARREDRAGLH
Ga0207663_112408541	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ELVAEARAIDWDFATWCCVSGHDASDPEARRMFEWLLAYARREGRAGLH
Ga0207663_113455591	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	HQPVMLMELVAEARAIDWDFTTWCCVSGHDASDPEARRMFECLLAYARREGRAGLH
Ga0207703_120241521	3300026035	Switchgrass Rhizosphere	EWDFTNWCHASGYDPSDQDARPMFECLLAYAMGEGRAGLH
Ga0207639_101340443	3300026041	Corn Rhizosphere	AVDWDFTTWCDASGHDATDAHAHLMFECLLAYASRPEGRAGLN
Ga0257146_10477471	3300026374	Soil	QTMTITDLVAQARAADWDFANWCYASGYDASDPHARHMFECLLAYARGEGRAGLN
Ga0209418_10032041	3300027371	Forest Soil	MSRIPLSGAEAFLYAEARALDWDFTYWCYASGYDAGDPDARRTFERLLAYARHEGRAGMN
Ga0209684_10549351	3300027527	Tropical Forest Soil	SWDFNDWCYASGYDASDPDSRHMFECLLAYAKREGRAGLH
Ga0307311_100606961	3300028716	Soil	NWCYASGHDASDPDAHRMFECLLAYARRESRTGLN
Ga0307287_101945281	3300028796	Soil	DWPPHQSLTIMDLVAGARAVDWDFTIWCHASGRDATDSDARRMFECLLAYASRPEGRAGL
Ga0307305_102304682	3300028807	Soil	AVEWDFTNWCYASGYDASDPSARRMFECLLPYARREGCTGLN
Ga0247824_110025951	3300028809	Soil	AVLIAGARAVEWDFTNWCYASGYDASDPNARRMFECLLAYARREGCTGLN
Ga0307294_103240971	3300028810	Soil	HQPITLAELIAGARAVEWDFTNWCYASGYDDSDPNARRMFECLLAYARREGCTGLN
Ga0307292_101470291	3300028811	Soil	GDLISEARAVDWDFTHWCYVSGHDASDPDARRMFECLLAYARREGRVGLH
Ga0307302_106080341	3300028814	Soil	LAHQQITLAELIAGARAVEWDFTNWCYASGYDASDPNARRMFECLLAYARREGCTA
Ga0307300_101158221	3300028880	Soil	EARAVDWDFTHWCYVSGHDASDPDARRMFECLLAYARREGRVGLH
Ga0247827_102272131	3300028889	Soil	TNWCYASGYDASDPNARRMFECLLAYARREGCTGLN
Ga0307497_103260701	3300031226	Soil	MDLVAGARAVDWDFTTWCYASGHDATDADARLMFECLLAYASRPEGRAGLN
Ga0308194_103719922	3300031421	Soil	RTELAHQPITLAELIAGARAVEWDFTNWCYASGYDASDPSARRMFECLLPYARREGCTGL
Ga0318541_102455542	3300031545	Soil	NWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0318538_104925581	3300031546	Soil	TRQPITIADLVTEARAVDWDFSTWCYASGYDASDPAARRMFECLLAYARSEGRAGLH
Ga0318538_106301742	3300031546	Soil	DWDFSNWCHASGYDASDPYARRMFECLLAYAMREGRAGLH
Ga0318555_106871301	3300031640	Soil	PITITDLVAEARAVDWDFTNWCCASGYDASDPDASRMFECLLAYAKREGRAGLN
Ga0318572_100749301	3300031681	Soil	RQPITIADLVIEARAVDWDFSNWCCASGYDASDPDARHMFECLLAYAKLEGRAGLH
Ga0318560_107972171	3300031682	Soil	TDLIAEARAADWDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0318496_103013801	3300031713	Soil	NNWCYASGHDASDPDARRMFECLLTYARREGGAGLN
Ga0306917_108300431	3300031719	Soil	IAEARAADWDFTNWCYASGYDTSDPEARRIFECLLAYAKREGRAGLN
Ga0307468_1005638781	3300031740	Hardwood Forest Soil	ARAVEWDFTNWCYTSGYDASDPNARRMFECLLAYARREGCTGLN
Ga0318521_106867332	3300031770	Soil	LIAEARAADWDFTNWCYASGYDTSDPEARRIFECLLAYAKREGRAGLN
Ga0318497_104157891	3300031805	Soil	DTITDLIAEARAADWDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0318567_107737382	3300031821	Soil	ARGVDWDFANWCYASGYHASDVDARRMFERLLAYARREGRAGLN
Ga0310917_109941302	3300031833	Soil	TITITDLIAEARAADWDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0318517_101145252	3300031835	Soil	GDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0318512_100523723	3300031846	Soil	AAPPDDTITDLIAEARAADWDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0306919_112884623	3300031879	Soil	FSNWCHASGYDASDPYARRMFECLLAYAMREGRAGLH
Ga0318520_102911034	3300031897	Soil	TDLVAEARAVDWDFTNWCYASGYDASDPDVRRMFECLLAYAMREGRAGLH
Ga0306923_104630904	3300031910	Soil	DWDFTNWCCVSGYDASDPDARRMFECLLTYAMREGRAGLH
Ga0306923_112972971	3300031910	Soil	FSNWCCASGYDASDPDARHMFECLLAYAKLEGRAGLH
Ga0306923_117239732	3300031910	Soil	TITDLIAEARAADWDFTNWCYASGYDTSDPEARRTFECLLAYAKRAGRAGLN
Ga0306921_105389471	3300031912	Soil	ALDWDFTNWCCPSGYDASDPDARRMFECLLTYAMREGRAGLH
Ga0306921_107024743	3300031912	Soil	GIISDLIAEARAADWNFNNWCSASGYDGSDPYARRMFDCLLAYAKRERGAGLH
Ga0306921_117660672	3300031912	Soil	PPRETITITDLIAEARAADWDFTNWCYASGYDTSDPEARRIFECLLAYAKREGRAGLN
Ga0310912_107962722	3300031941	Soil	DFSNWCHASGYDASDPYARRMFECLLAYAMREGRAGLH
Ga0310912_108043321	3300031941	Soil	TITDLVAEARAVDWDFTNWCCASGYDASDPDASRMFECLLAYAKREGRAGLN
Ga0310910_105560142	3300031946	Soil	DFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0310909_108920481	3300031947	Soil	ADWDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0306926_122735161	3300031954	Soil	AADWDFTIWCYASGYDTSDPEARRIFECLLAYAKREGRAGLN
Ga0318507_101655271	3300032025	Soil	GWPPRQTITITDLIAEARAADWDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0318506_103220891	3300032052	Soil	EARAADWDFTNWCHASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0318505_101965562	3300032060	Soil	RGDFTNWCYASGYDTSDPEARRMFECLLAYAKREGRAGLN
Ga0306924_103422651	3300032076	Soil	ADWPLRQPATLTELVAEARALDWDFTNWCCVSGYDASDPDARRMFECLLTYAMREGRAGL
Ga0306924_104037072	3300032076	Soil	VIEARAVDWDFSNWCCASGYDASDPDARHMFECLLAYAKLEGRAGLH
Ga0306920_1036961002	3300032261	Soil	VEARAADWNFNNWCSASGYDGSDPYARRMFDCLLAYARRERGAGLN
Ga0370545_021366_945_1091	3300034643	Soil	VACARAVDWDFTIWCHASGHDATDAHAHLMFECLLAYASRPEGRAGLN

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F028246

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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