NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F027894

Metagenome / Metatranscriptome Family F027894

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F027894
Family Type Metagenome / Metatranscriptome
Number of Sequences 193
Average Sequence Length 59 residues
Representative Sequence MAEATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDTLIAQIAKNDIVKITQQDGR
Number of Associated Samples 134
Number of Associated Scaffolds 193

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 88.60 %
% of genes near scaffold ends (potentially truncated) 15.54 %
% of genes from short scaffolds (< 2000 bps) 84.97 %
Associated GOLD sequencing projects 125
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (72.539 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(17.617 % of family members)
Environment Ontology (ENVO) Unclassified
(25.389 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(40.933 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.45%    β-sheet: 43.68%    Coil/Unstructured: 52.87%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
e.52.1.0: NAD kinase/diacylglycerol kinase-liked4wera14wer0.68
e.52.1.0: NAD kinase/diacylglycerol kinase-liked4wera14wer0.68
e.52.1.0: NAD kinase/diacylglycerol kinase-liked3s40a_3s400.65
e.52.1.0: NAD kinase/diacylglycerol kinase-liked3s40a_3s400.65
b.38.1.6: Sm-like ribonucleoproteinsd2k57a12k570.64
b.38.1.2: Sm-like ribonucleoproteinsd2ylba_2ylb0.64
b.38.1.6: Sm-like ribonucleoproteinsd2k57a12k570.64
b.38.1.2: Sm-like ribonucleoproteinsd2ylba_2ylb0.64
b.38.1.0: Sm-like ribonucleoproteinsd4f7ug_4f7u0.61
b.38.1.0: Sm-like ribonucleoproteinsd4f7ug_4f7u0.61


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 193 Family Scaffolds
PF00582Usp 56.48
PF13419HAD_2 7.25
PF01627Hpt 3.63
PF00464SHMT 2.59
PF02746MR_MLE_N 1.04
PF04909Amidohydro_2 1.04
PF13378MR_MLE_C 1.04
PF02771Acyl-CoA_dh_N 0.52
PF02281Dimer_Tnp_Tn5 0.52
PF05567Neisseria_PilC 0.52
PF12323HTH_OrfB_IS605 0.52
PF05598DUF772 0.52
PF09012FeoC 0.52
PF00702Hydrolase 0.52
PF07969Amidohydro_3 0.52

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 193 Family Scaffolds
COG0112Glycine/serine hydroxymethyltransferaseAmino acid transport and metabolism [E] 2.59
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 2.59
COG4948L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamilyCell wall/membrane/envelope biogenesis [M] 2.07
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.52


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A72.54 %
All OrganismsrootAll Organisms27.46 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_106982821All Organisms → cellular organisms → Bacteria3176Open in IMG/M
3300003203|JGI25406J46586_10071263Not Available1090Open in IMG/M
3300003911|JGI25405J52794_10010491All Organisms → cellular organisms → Bacteria1762Open in IMG/M
3300004480|Ga0062592_101709324Not Available612Open in IMG/M
3300004633|Ga0066395_10783762Not Available571Open in IMG/M
3300004798|Ga0058859_11685063Not Available1624Open in IMG/M
3300005093|Ga0062594_102453474Not Available571Open in IMG/M
3300005167|Ga0066672_10744732Not Available623Open in IMG/M
3300005172|Ga0066683_10579998All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300005180|Ga0066685_10728415Not Available678Open in IMG/M
3300005289|Ga0065704_10650112Not Available571Open in IMG/M
3300005294|Ga0065705_10040372Not Available1191Open in IMG/M
3300005332|Ga0066388_101029808All Organisms → cellular organisms → Bacteria1383Open in IMG/M
3300005332|Ga0066388_104167580All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium737Open in IMG/M
3300005332|Ga0066388_107333843Not Available554Open in IMG/M
3300005332|Ga0066388_107410109Not Available551Open in IMG/M
3300005332|Ga0066388_107679344Not Available540Open in IMG/M
3300005338|Ga0068868_100564638Not Available1004Open in IMG/M
3300005445|Ga0070708_100857924All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium853Open in IMG/M
3300005446|Ga0066686_10754874Not Available651Open in IMG/M
3300005467|Ga0070706_100151291All Organisms → cellular organisms → Bacteria2166Open in IMG/M
3300005540|Ga0066697_10265164All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300005558|Ga0066698_10844230Not Available590Open in IMG/M
3300005559|Ga0066700_10437669All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria919Open in IMG/M
3300005560|Ga0066670_10160066Not Available1324Open in IMG/M
3300005577|Ga0068857_100248196All Organisms → cellular organisms → Bacteria1631Open in IMG/M
3300005617|Ga0068859_101930178Not Available652Open in IMG/M
3300005713|Ga0066905_100270469Not Available1318Open in IMG/M
3300005713|Ga0066905_101527969Not Available609Open in IMG/M
3300005764|Ga0066903_100063926All Organisms → cellular organisms → Bacteria4632Open in IMG/M
3300005764|Ga0066903_100242908Not Available2765Open in IMG/M
3300005764|Ga0066903_101191483Not Available1413Open in IMG/M
3300005764|Ga0066903_105259964Not Available684Open in IMG/M
3300005764|Ga0066903_108706538Not Available516Open in IMG/M
3300005981|Ga0081538_10013206Not Available6555Open in IMG/M
3300005983|Ga0081540_1003807All Organisms → cellular organisms → Bacteria → Proteobacteria11804Open in IMG/M
3300006049|Ga0075417_10064759Not Available1607Open in IMG/M
3300006194|Ga0075427_10027688Not Available921Open in IMG/M
3300006797|Ga0066659_11753681Not Available524Open in IMG/M
3300006844|Ga0075428_100105240All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella3077Open in IMG/M
3300006844|Ga0075428_100145737Not Available2573Open in IMG/M
3300006844|Ga0075428_100750827All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae → Hydrogenophilaceae bacterium1038Open in IMG/M
3300006844|Ga0075428_102438259All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium536Open in IMG/M
3300006845|Ga0075421_100581727Not Available1318Open in IMG/M
3300006847|Ga0075431_102221858Not Available503Open in IMG/M
3300006852|Ga0075433_11312812Not Available627Open in IMG/M
3300006853|Ga0075420_101457555Not Available587Open in IMG/M
3300006854|Ga0075425_102236814Not Available609Open in IMG/M
3300006871|Ga0075434_102160855Not Available561Open in IMG/M
3300006872|Ga0101947_1078182Not Available830Open in IMG/M
3300006969|Ga0075419_10049493All Organisms → cellular organisms → Bacteria2639Open in IMG/M
3300006969|Ga0075419_11408699Not Available520Open in IMG/M
3300007255|Ga0099791_10069380All Organisms → cellular organisms → Bacteria1597Open in IMG/M
3300009012|Ga0066710_100181532All Organisms → cellular organisms → Bacteria2973Open in IMG/M
3300009012|Ga0066710_100280022Not Available2430Open in IMG/M
3300009038|Ga0099829_10074594All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium2581Open in IMG/M
3300009088|Ga0099830_10320360All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1241Open in IMG/M
3300009089|Ga0099828_10515349Not Available1078Open in IMG/M
3300009089|Ga0099828_10764133Not Available866Open in IMG/M
3300009090|Ga0099827_10145085Not Available1937Open in IMG/M
3300009100|Ga0075418_10108328Not Available2951Open in IMG/M
3300009156|Ga0111538_10560856Not Available1448Open in IMG/M
3300009156|Ga0111538_10889016Not Available1128Open in IMG/M
3300009162|Ga0075423_10690615Not Available1077Open in IMG/M
3300009162|Ga0075423_13181888Not Available503Open in IMG/M
3300009444|Ga0114945_10526552Not Available713Open in IMG/M
3300009609|Ga0105347_1255156Not Available722Open in IMG/M
3300009691|Ga0114944_1116046All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium1032Open in IMG/M
3300009691|Ga0114944_1195888Not Available806Open in IMG/M
3300009691|Ga0114944_1236189Not Available738Open in IMG/M
3300009777|Ga0105164_10364404Not Available718Open in IMG/M
3300009792|Ga0126374_10204834Not Available1251Open in IMG/M
3300009792|Ga0126374_10598292Not Available813Open in IMG/M
3300009792|Ga0126374_10853643Not Available701Open in IMG/M
3300009817|Ga0105062_1042387All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium819Open in IMG/M
3300010043|Ga0126380_10132254Not Available1563Open in IMG/M
3300010043|Ga0126380_10586177Not Available875Open in IMG/M
3300010046|Ga0126384_10046690Not Available2965Open in IMG/M
3300010046|Ga0126384_10331126Not Available1263Open in IMG/M
3300010046|Ga0126384_11739930Not Available590Open in IMG/M
3300010046|Ga0126384_12009571Not Available553Open in IMG/M
3300010046|Ga0126384_12150440Not Available536Open in IMG/M
3300010047|Ga0126382_10058267All Organisms → cellular organisms → Bacteria2304Open in IMG/M
3300010047|Ga0126382_10496416Not Available980Open in IMG/M
3300010304|Ga0134088_10098373Not Available1375Open in IMG/M
3300010358|Ga0126370_12349910Not Available528Open in IMG/M
3300010359|Ga0126376_10506228Not Available1119Open in IMG/M
3300010359|Ga0126376_10664635Not Available996Open in IMG/M
3300010359|Ga0126376_11454643Not Available712Open in IMG/M
3300010359|Ga0126376_11815542Not Available648Open in IMG/M
3300010360|Ga0126372_11137668Not Available801Open in IMG/M
3300010361|Ga0126378_10798204Not Available1053Open in IMG/M
3300010362|Ga0126377_10432940Not Available1334Open in IMG/M
3300010362|Ga0126377_12312405Not Available614Open in IMG/M
3300010362|Ga0126377_13121579Not Available535Open in IMG/M
3300010362|Ga0126377_13160489Not Available532Open in IMG/M
3300010366|Ga0126379_10182583All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1997Open in IMG/M
3300010366|Ga0126379_11684715Not Available739Open in IMG/M
3300010366|Ga0126379_13360731Not Available536Open in IMG/M
3300010398|Ga0126383_10456462Not Available1328Open in IMG/M
3300010398|Ga0126383_11981266Not Available670Open in IMG/M
3300010398|Ga0126383_12718175Not Available577Open in IMG/M
3300011270|Ga0137391_10145187All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium2066Open in IMG/M
3300011270|Ga0137391_10721711Not Available827Open in IMG/M
3300011270|Ga0137391_10986877Not Available686Open in IMG/M
3300011432|Ga0137428_1059291Not Available1026Open in IMG/M
3300012022|Ga0120191_10064076Not Available677Open in IMG/M
3300012189|Ga0137388_10465915Not Available1173Open in IMG/M
3300012199|Ga0137383_10176254All Organisms → cellular organisms → Bacteria1567Open in IMG/M
3300012201|Ga0137365_10398615Not Available1015Open in IMG/M
3300012201|Ga0137365_10442356All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella957Open in IMG/M
3300012204|Ga0137374_10030169All Organisms → cellular organisms → Bacteria5944Open in IMG/M
3300012205|Ga0137362_10884383Not Available763Open in IMG/M
3300012206|Ga0137380_10434156Not Available1163Open in IMG/M
3300012206|Ga0137380_10486691All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1088Open in IMG/M
3300012207|Ga0137381_10030864All Organisms → cellular organisms → Bacteria4324Open in IMG/M
3300012207|Ga0137381_10175541All Organisms → cellular organisms → Bacteria1852Open in IMG/M
3300012210|Ga0137378_10080874All Organisms → cellular organisms → Bacteria2963Open in IMG/M
3300012351|Ga0137386_10866427Not Available648Open in IMG/M
3300012354|Ga0137366_10402232Not Available997Open in IMG/M
3300012361|Ga0137360_10594131Not Available947Open in IMG/M
3300012361|Ga0137360_11210780Not Available653Open in IMG/M
3300012685|Ga0137397_10201151Not Available1481Open in IMG/M
3300012918|Ga0137396_10736946Not Available726Open in IMG/M
3300012922|Ga0137394_10739900Not Available826Open in IMG/M
3300012925|Ga0137419_10365467Not Available1120Open in IMG/M
3300012927|Ga0137416_10494690Not Available1052Open in IMG/M
3300012930|Ga0137407_11374996Not Available671Open in IMG/M
3300012944|Ga0137410_10706620Not Available840Open in IMG/M
3300012948|Ga0126375_10185376Not Available1351Open in IMG/M
3300012948|Ga0126375_10873091Not Available720Open in IMG/M
3300012948|Ga0126375_10955566Not Available694Open in IMG/M
3300012948|Ga0126375_10966424All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium690Open in IMG/M
3300012948|Ga0126375_11135401Not Available646Open in IMG/M
3300012977|Ga0134087_10299441Not Available753Open in IMG/M
3300014868|Ga0180088_1077393Not Available596Open in IMG/M
3300015371|Ga0132258_10835501All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor2323Open in IMG/M
3300015372|Ga0132256_101247076All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella857Open in IMG/M
3300016341|Ga0182035_10609633Not Available944Open in IMG/M
3300018053|Ga0184626_10178418Not Available902Open in IMG/M
3300018077|Ga0184633_10589130Not Available526Open in IMG/M
3300018079|Ga0184627_10023914All Organisms → cellular organisms → Bacteria3028Open in IMG/M
3300018079|Ga0184627_10202346All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium1049Open in IMG/M
3300018082|Ga0184639_10345910Not Available776Open in IMG/M
3300018082|Ga0184639_10653916All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla509Open in IMG/M
3300018466|Ga0190268_12128289Not Available521Open in IMG/M
3300019233|Ga0184645_1290256Not Available1295Open in IMG/M
3300019254|Ga0184641_1283696Not Available626Open in IMG/M
3300019257|Ga0180115_1410656Not Available788Open in IMG/M
3300019487|Ga0187893_10366985All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300020063|Ga0180118_1383928Not Available999Open in IMG/M
3300020065|Ga0180113_1435254Not Available862Open in IMG/M
3300020083|Ga0194111_10844939Not Available548Open in IMG/M
3300022563|Ga0212128_10031336All Organisms → cellular organisms → Bacteria3425Open in IMG/M
3300022563|Ga0212128_10035661All Organisms → cellular organisms → Bacteria3205Open in IMG/M
3300022563|Ga0212128_10041612Not Available2963Open in IMG/M
3300022563|Ga0212128_10352921All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300022563|Ga0212128_10413573All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla834Open in IMG/M
3300022563|Ga0212128_10701314All Organisms → cellular organisms → Bacteria607Open in IMG/M
(restricted) 3300023208|Ga0233424_10217868All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300025157|Ga0209399_10260333Not Available687Open in IMG/M
3300025910|Ga0207684_10113914All Organisms → cellular organisms → Bacteria2315Open in IMG/M
3300025910|Ga0207684_11061602Not Available675Open in IMG/M
3300025961|Ga0207712_10442313All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella1101Open in IMG/M
3300025961|Ga0207712_11549273All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium594Open in IMG/M
3300026075|Ga0207708_10793041Not Available815Open in IMG/M
3300026116|Ga0207674_10462309Not Available1226Open in IMG/M
3300026118|Ga0207675_100572405Not Available1130Open in IMG/M
3300026537|Ga0209157_1339004Not Available542Open in IMG/M
3300027056|Ga0209879_1012458Not Available1386Open in IMG/M
3300027846|Ga0209180_10052235All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium2257Open in IMG/M
3300027873|Ga0209814_10037294All Organisms → cellular organisms → Bacteria2016Open in IMG/M
3300027874|Ga0209465_10003749All Organisms → cellular organisms → Bacteria6596Open in IMG/M
3300027874|Ga0209465_10657272Not Available516Open in IMG/M
3300027880|Ga0209481_10153397Not Available1138Open in IMG/M
3300027882|Ga0209590_10932450Not Available545Open in IMG/M
3300027903|Ga0209488_10276164Not Available1257Open in IMG/M
3300027907|Ga0207428_10059379All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella3033Open in IMG/M
3300027907|Ga0207428_10255063Not Available1307Open in IMG/M
3300028592|Ga0247822_11334486Not Available602Open in IMG/M
3300028792|Ga0307504_10052154Not Available1172Open in IMG/M
3300030570|Ga0247647_1171771All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella601Open in IMG/M
3300030903|Ga0308206_1123296Not Available601Open in IMG/M
3300030993|Ga0308190_1047196Not Available819Open in IMG/M
3300031093|Ga0308197_10217755Not Available659Open in IMG/M
3300031421|Ga0308194_10047585Not Available1084Open in IMG/M
3300031547|Ga0310887_10102115Not Available1423Open in IMG/M
3300031942|Ga0310916_10791350Not Available799Open in IMG/M
3300031995|Ga0307409_102361288Not Available561Open in IMG/M
3300034661|Ga0314782_013578Not Available1288Open in IMG/M
3300034661|Ga0314782_019166Not Available1147Open in IMG/M
3300034665|Ga0314787_020127Not Available947Open in IMG/M
3300034668|Ga0314793_004522Not Available1718Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil17.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil17.62%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere11.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil7.77%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs5.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.70%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.11%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.59%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.59%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.55%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.55%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.04%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.04%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.04%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.04%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.04%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.04%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.52%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.52%
WastewaterEnvironmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater0.52%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.52%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.52%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.52%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.52%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.52%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.52%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.52%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.52%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.52%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.52%
Drinking Water PipesEngineered → Built Environment → Unclassified → Unclassified → Unclassified → Drinking Water Pipes0.52%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300004798Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006194Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006872Biofilm microbial communities from drinking water pipes in SingaporeEngineeredOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300009691Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2EnvironmentalOpen in IMG/M
3300009777Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking waterEnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009817Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011432Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2EnvironmentalOpen in IMG/M
3300012022Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014868Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019233Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019254Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019257Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300020063Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020065Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020083Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300mEnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300023208 (restricted)Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MGEnvironmentalOpen in IMG/M
3300025157Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300027056Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300030570Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb12 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300034661Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034665Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034668Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10698282123300000956SoilMAKATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKNVLVAQIAKNEIVKITHQDGT*
JGI25406J46586_1007126323300003203Tabebuia Heterophylla RhizosphereMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDTLIAQIVKSDIVKITHQDGR*
JGI25405J52794_1001049113300003911Tabebuia Heterophylla RhizosphereMAEAKPVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDELIAQIAKNDIVRITHQDGS*
Ga0062592_10170932423300004480SoilAEATMVTFHLRNGEQRTYQDITRLDTSRPHTVLVYYQDTLIAQIAKNDIVRISQQPAR*
Ga0066395_1078376213300004633Tropical Forest SoilCWAFVKRQFERGTRMAEAHMVTFHLCNGEQRTYKDVTRLDTSRPHTVLIYRNDALIAQIAKHDIVRTTQQDARALP*
Ga0058859_1168506333300004798Host-AssociatedHLRNGEQRTYKDITRLDTSRPHTVLVYYKDVLIAQIAKNEIVKITQQDDR*
Ga0062594_10245347423300005093SoilMAEAKIVTLHLRNGEQRTYKDITRLDTSRPHTVLVYYKDVLIAQIAKNEIVKITQQDDR*
Ga0066672_1074473223300005167SoilMAEAKLVTFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDTLIAQIAKSDIVKITQQDGR*
Ga0066683_1057999823300005172SoilMAAVKTVTFHLRNGEQRTYKDITRVDTSRPHTVLIYSHDVLTAQIAKLDIVKITQQDSA*
Ga0066685_1072841523300005180SoilMAEAKLVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDALIAQIAKSDIVKITQQDGR*
Ga0065704_1065011223300005289Switchgrass RhizosphereMAEAKLVTFYLRNGEQRTYKDITRLDTSRPHTVLVYHKDELIAQIAKNDIVRITHQDES*
Ga0065705_1004037223300005294Switchgrass RhizosphereMAEAKLVTFHLRNGEQRIYKDITRLDTSRPHTVLVYHKDELIAQIAKNDIVRITHQDES*
Ga0066388_10102980823300005332Tropical Forest SoilMAAATLVTFHLRNGEQRTYKDITSLDTSRPHTVLVYHKDVLVAQIAKNDIVKITQQDGR*
Ga0066388_10416758023300005332Tropical Forest SoilMAEAKIVTFHLRNGEQRTYKDVTRLDTSRPHTVLIYSNNTLMAQIAKHDIVKMTQQDAR*
Ga0066388_10733384323300005332Tropical Forest SoilMAEAHMVTFHLRNGEQRTYKDVTRLDTSRPHTVLVYRNDALIAQIARHDIVKTTQQDARALP*
Ga0066388_10741010913300005332Tropical Forest SoilMAEAKMVTFHLRNGEQRTYKDVTRLDTSRPHTVLIYRNDALIAQIAKPDIVKTTQQGARALP*
Ga0066388_10767934413300005332Tropical Forest SoilMAAATLVTFHLRNGEQRTYNDITRLDTSRPHTVLVYHKDVLVAQIAKNDIVKITQQ
Ga0068868_10056463823300005338Miscanthus RhizosphereMAEAKIVTLHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLIAQIAKNEIVKITQQDDR*
Ga0070708_10085792423300005445Corn, Switchgrass And Miscanthus RhizosphereMAEAKMVTFHLRNGEQRTYKDVTRLDTSRPHTVLIYRNDALIAQIAKPDIVKTTQQDARALP*
Ga0066686_1075487413300005446SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLVAQIAKNEIVKITHQDGS*
Ga0070706_10015129133300005467Corn, Switchgrass And Miscanthus RhizosphereMAAMKTVTFHLRNGEQRTYRDITRLDTSRPHIVLIYSHDALTAQIARQDIVSITQQDSA*
Ga0066697_1026516423300005540SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDVLVAQIAKNEIVKITHQDGS*
Ga0066698_1084423023300005558SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDVLVAQIAKNEIVKITHQEGS*
Ga0066700_1043766923300005559SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDVLVAQIAKNEIVKITHQDGN*
Ga0066670_1016006623300005560SoilMAETKMVTFHLRNGEQRTYKDVTRLDTSRPHIVRVYRNGVLMAQIAKHEIVKTTQQDAR*
Ga0068857_10024819623300005577Corn RhizosphereMAAAKIVTLHLRNGEQRTYKDITRLDTSRPHTVLVYYKDVLIAQIAKNEIVKITQQDDR*
Ga0068859_10193017813300005617Switchgrass RhizosphereMAEATMVTFHLRNGEQRTYQDITRLDTSRPHTVLVYYQDTLIAQIAKNDIVRISQQPAR*
Ga0066905_10027046913300005713Tropical Forest SoilMAEAKLVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDELIAQIAKNDIVRITHQDES*
Ga0066905_10152796913300005713Tropical Forest SoilMAEATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLVAQIAKNDIVKITQQDGR*
Ga0066903_10006392653300005764Tropical Forest SoilMAAMKSVTFHLRNGEQRTYKNITRVDTSRPHTVLIYSQDVLTAQIAKPDIIKMTQQDSA*
Ga0066903_10024290823300005764Tropical Forest SoilMAEAKMVTFHLRNGEQRTYKDVTRLDTSRPHTVLIYRNDALIAQIAKHDIVRTTQQDARALP*
Ga0066903_10119148323300005764Tropical Forest SoilMAAAKLVTFHLRNGEQRPYNDITRLDTSRPHTVLVYHKDVLIAQIVKNDIVKITQQDGR*
Ga0066903_10525996413300005764Tropical Forest SoilMAEAKMVTFHLRNGEQRTYKDVTRLDTSRPHIVRVYRDGVLMAQIAKHDIVKTTQQEARK
Ga0066903_10870653813300005764Tropical Forest SoilFPLLYFPWKGDIMAQAKMVTFHLRNGEQRTYNDITRLDTSRPHTVLVYSMDVLIAQIAKNDIVKITQQDER*
Ga0081538_1001320643300005981Tabebuia Heterophylla RhizosphereMAEAQMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDVLIAQIAKNEIVKITRQDGK*
Ga0081540_100380713300005983Tabebuia Heterophylla RhizosphereAFYLRNGEQRTYKGITRLDTSRPHTVLVYHKDELIAQIAKNDIVRITHQDES*
Ga0075417_1006475943300006049Populus RhizosphereMAEATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKGVLVAQIAKNEIVKITHQDGS*
Ga0075427_1002768823300006194Populus RhizosphereVVELQKKGEAMAEVKLVTFHLRNGEQRTYKDITHLDTLRPHTVLVYHKDELIAQIAKNDIVRITHQDGS*
Ga0066659_1175368123300006797SoilAVVELQKKGETMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDVLVAQIAKNEIVKITHQDGS*
Ga0075428_10010524033300006844Populus RhizosphereMAEVKLVTFHLRNGEQRTYKDITHLDTLRPHTVLVYHKDELIAQIAKNDIVRITHQDGS*
Ga0075428_10014573743300006844Populus RhizosphereMAEATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLIAQIAKNEIVKISQQDSR*
Ga0075428_10075082713300006844Populus RhizosphereMIPQKGGTMVEATMVTFHLRNGEQRTYQDITRLDTSRPHTVLVYYQDTLIAQIAKNDIVRISQQPAR*
Ga0075428_10243825913300006844Populus RhizosphereMAEATMVTFHLRNGEQRAYKDITRLDTSRPHTVLVYHKDVLIAQIAKNEIVKISQQ
Ga0075421_10058172723300006845Populus RhizosphereMAEATMVTFHLHNGEQRTYKDITRLDTSRPHTVLVYHKDVLIAQIAKNEIVKIIQQDSR*
Ga0075431_10222185823300006847Populus RhizosphereMAEAKMETFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDTLIAQIAKSDIVKITHQDGR*
Ga0075433_1131281213300006852Populus RhizosphereMAEATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLVAQIAKNEIVKITHQDGT*
Ga0075420_10145755523300006853Populus RhizosphereMAEAKMVTFHLRNGEQRTYKDITHLDTSRPHTVLVYYKDVLIAQIAKNEIVKITQQDGR*
Ga0075425_10223681423300006854Populus RhizosphereMKGDTMAEATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLVAQIAKNEIVKITHQDGT*
Ga0075434_10216085523300006871Populus RhizosphereMAEATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKGVLVAQIAKNEIVKITHQDGN*
Ga0101947_107818223300006872Drinking Water PipesMAEKKLVTFHLRNGEQRSYKDVTRLDTSRPVTVLVYQQDHLIAQVAKQDIVKTTQQDTE*
Ga0075419_1004949343300006969Populus RhizosphereMAEATMVTFHLHNGEQRTYKDITRLDTSRPHTVLVYHKDVLIAQIAKNEIVKISQQDSR*
Ga0075419_1140869913300006969Populus RhizosphereMAEVKLVTFHLRNGEQRTYKDITHLDTLRPHTVLVYHKDELIAQIAKNDIVRITHQYGS*
Ga0099791_1006938023300007255Vadose Zone SoilMAEAKLVTFHLRNGEQRIYKDITRLDTSRPHTVLVYHQDVLIAQIAKNDIVKITQQDGR*
Ga0066710_10018153233300009012Grasslands SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDVLVAQIAKNEIVKITHQDGN
Ga0066710_10028002233300009012Grasslands SoilMVETKKVTFHLRNGEQRTYTGITRLDTSRPHTVLVYHQEELIAQIAKHEIVKTTQQDEG
Ga0099829_1007459423300009038Vadose Zone SoilMAEAKMVTFHLRNGEQRTYQDITRLDTSRPHTVLVYYKDVLIAQIAKSDIVRITQQDGR*
Ga0099830_1032036023300009088Vadose Zone SoilMAEAKMVTFHLRNDEQRTYQDITRLDTSRPHTVLVYYKDVLIAQIAKSDIVRITQQDGR*
Ga0099828_1051534923300009089Vadose Zone SoilMAEAKIVTFHLRNGEQRTYNDVTRLDTTRPHTVLVYYKDVLIAQIAKHEIVKTTQQDGG*
Ga0099828_1076413323300009089Vadose Zone SoilMAEAKMVTFHLRNGEQRTYNDVTRLDTARPHTVLVYYKDVLIAQIARQDIVKTTQQDAR*
Ga0099827_1014508533300009090Vadose Zone SoilMAEAKMVTFHLRNGEQRTYQDITRLDTSRPHTVLVYHKDVLVAQIAKNEIVKITHQEGS*
Ga0075418_1010832843300009100Populus RhizosphereMAEATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLIAQIAKNEIVKIIQQDSR*
Ga0111538_1056085623300009156Populus RhizosphereMAEATMVTFHLRNGEQRAYKDITRLDTSRPHTVLVYHKDVLIAQIAKNEIVKIIQQDSR*
Ga0111538_1088901623300009156Populus RhizosphereMVTFHLRNGEQRTYQDITRLDTSRPHTVLVYYQDTLIAQIAKNDIVRISQQPAR*
Ga0075423_1069061513300009162Populus RhizosphereTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKGVLVAQIAKNEIVKITHQDGS*
Ga0075423_1318188823300009162Populus RhizosphereMAEATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLVAQIAKNEIVKITHQDGR*
Ga0114945_1052655213300009444Thermal SpringsMAEAKMVTFQLRNGEQRTYKDVTRLDTSRPHTVLIYRNGVLIAQIAKHEIVKTTQQDARALP*
Ga0105347_125515623300009609SoilMVEAAMVTFHLRNGEQRTYQDITRLDTSRPHTVLVYYQDTLIAQIATNDIVRISQHHAG*
Ga0114944_111604623300009691Thermal SpringsMAEAKMVTFHLRNGEQRTYTDVTRLDTSRPHTVLVYRNDVLMAQIARHEIIKTTQQEIR*
Ga0114944_119588823300009691Thermal SpringsMAAMQTVTLHLRNGEQRTYKDITRLDTSRPHIVRMYSHDTLIAQIAREDIIRITQQDAA*
Ga0114944_123618923300009691Thermal SpringsMATMQTVTFHLRNGEQRTYKGITRVDTSRPHTVRIYSHDVLTAQIAKQDIVRITQQDSA*
Ga0105164_1036440423300009777WastewaterMAEAKMVTFHLRNGEQRIYKDITRLDISRPHTVLVYHKDELIAQIAKRDIVKTTQQDSK*
Ga0126374_1020483413300009792Tropical Forest SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDTLIAQIAKSDIVKITHQDGR*
Ga0126374_1059829223300009792Tropical Forest SoilMAEAHMVTFHLRNGEQRTYKDVTRLDTSRPHTVLIYRNDALIAQIAKPDIVKTTQQDARALP*
Ga0126374_1085364313300009792Tropical Forest SoilMAAATLVTFHLRNGEQRTYNDITRLDTSRPHTVLVYHKDVLVAQIAKNDIVKITQQDGR*
Ga0105062_104238723300009817Groundwater SandMAETKNVTFHLRNGEQRIYKGITRLDTSRPHTVLVYHNDVLIAQIAKHEIIKTTQQDEG*
Ga0126380_1013225413300010043Tropical Forest SoilAAKLVTFHLRNGEQRLYNDITRLDTSRPHTVLVYHKDVLIAQIAKNDIVKITQQDGR*
Ga0126380_1058617713300010043Tropical Forest SoilMAETKKVTFHLRNGEQRTYKGITRLDASRPHTVLVYHHNVLIAQIAKHEIVKTTQQDEG*
Ga0126384_1004669043300010046Tropical Forest SoilMAAATLVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLVAQIAKNDIVKITQQDGR*
Ga0126384_1033112623300010046Tropical Forest SoilMAEAKLVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDELIAQIVKNDIVRITHQDES*
Ga0126384_1173993023300010046Tropical Forest SoilMAEATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLVAQIAKNEIVKIIHQDAH*
Ga0126384_1200957113300010046Tropical Forest SoilMAAAKLITFHLRNGEQRVYQDITRLDTSRPHTVLVYHKDVLIAQIAKNDIVKITQQDGR*
Ga0126384_1215044013300010046Tropical Forest SoilMAEAKMVTFHLRNGEQRTYKDVTRLDTSRPHTVLIYRNDALIAQIAKPDIVKTTQ
Ga0126382_1005826723300010047Tropical Forest SoilMAEAHMVTFHLRNGEQRTYKDVTRLDTSRPHTVLIYRNDALIAQIAKPDIVKTTQQGARALP*
Ga0126382_1049641623300010047Tropical Forest SoilMAETKKVTFHLRNGEQRTYKGITRLDTSRPHTVLVYHQDMLIAQIAKHEIVKTTQQDEA*
Ga0134088_1009837323300010304Grasslands SoilMAEAKKVTFHLRNGEQRTYTGITRLDTSRPHTVLVYHQEELIAQIAKHEIVKTTQQDEG*
Ga0126370_1234991023300010358Tropical Forest SoilMAEATIVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLVAQIAKNEIVKITHQDES*
Ga0126376_1050622813300010359Tropical Forest SoilMAETKKVTFHLRNGEQRTYTGITRLDTSRPHTVLVYHKDVLIAQIAKHEIVKTTQQDEA*
Ga0126376_1066463523300010359Tropical Forest SoilMAATQTVTFHLRNGEQRTYKDITRVDTSRPHTVLIYSHDVLIAQIARQDIIKIAPQDSA*
Ga0126376_1145464323300010359Tropical Forest SoilTMAEAKLVTFYLRNGEQRTYKDITRLDTSRPHTVLVYHKDELIAQIAKNDIVRITHQDES
Ga0126376_1181554213300010359Tropical Forest SoilFPWKGDIMAQAKMVTFHLRSGEQRTYNDITRLDTSRPHTVLVYSMDVLIAQIAKNDIVKITQQDER*
Ga0126372_1113766823300010360Tropical Forest SoilLRNGEQRTYTDITRLDTSRPHTVLVYHKDKLIAQIVKNDIVRITHQDES*
Ga0126378_1079820423300010361Tropical Forest SoilMVTFHLRNGEQRTYKDVTRLDTSRPHTVLIYRNDALIAQIAKPDIVKTTQQDARALP*
Ga0126377_1043294023300010362Tropical Forest SoilMAEAKMVTFHLRNGEQRTYRDITRLETSRPHTMLVYYKDALIAQIAKSDIVKITYEDER*
Ga0126377_1231240523300010362Tropical Forest SoilMAAMKSVTFHLRNGEQRTYKNITRVDTSRPHTVLIYSQDVLTAQIAKPDIIKITQQDSA*
Ga0126377_1312157913300010362Tropical Forest SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDALIAQIAKHEIVKTIQQDEG*
Ga0126377_1316048913300010362Tropical Forest SoilMAEAHMVTFHLCNGEQRTYKDITHLDTSRPHTVLVYYKDTLIAQIAKSDIVKITHQDGR*
Ga0126379_1018258333300010366Tropical Forest SoilMVTFHLRNGEQRTYKDVTRLDTSRPHTVLIYRNDALIAQIAKHDIVRTTQQDARALP*
Ga0126379_1168471523300010366Tropical Forest SoilMAAAKLVTFHLRNGEQRPYNDITRLDTSRPHTVLVYHKDVLIAQIAKNDIVKITQQDGR*
Ga0126379_1336073113300010366Tropical Forest SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDTLIAQIAKSDIVKITRQDGR*
Ga0126383_1045646223300010398Tropical Forest SoilMAEATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDTLIAQIAKNDIVKITQQDGR*
Ga0126383_1198126623300010398Tropical Forest SoilMAQAKMVTFHLRNGEQRTYNDITRLDTLRPHTVLVYSMDVLIAQIAKNDIVKITQQDER*
Ga0126383_1271817523300010398Tropical Forest SoilMAETKMVTFHLRNGEQRIYKDVTRLDTSRPHIVRVYRNGVLTAQIAKHDIVKTTQQDSR*
Ga0137391_1014518723300011270Vadose Zone SoilMAEAKMVTFHLRNGEQRTYQDIARLDTSRPHTVLVYYKDVLIAQIAKSDIVRITQQDGR*
Ga0137391_1072171113300011270Vadose Zone SoilGKIMAEAKLVTFHLRNGEQRIYKDITRLDTSRPHTVLVYHQDVLIAQIAKNDIVKIT*
Ga0137391_1098687723300011270Vadose Zone SoilMAEIKKVTFHLRNGEQRTYTGITRLDTSRPHTVLIYHNDVLIAQIAKHDIVKTTQQDEG*
Ga0137428_105929113300011432SoilMVEATMVTFHLRNGEQRTYQDITRLDTSRPHTVLVYYQDTLIAQIAKNDIVRISQQPAR*
Ga0120191_1006407623300012022TerrestrialMAEAKLVTFHLRNGEQRTYKDITRLDTSRSHTVLVYHKDELIAQIAKNDIVRITRQDES*
Ga0137388_1046591523300012189Vadose Zone SoilMAEAKLVTFHLRNGEQRIYKDITRLDTSRPHTVLVYYKDVLIAQIAKHEIVKTTQQDAR*
Ga0137383_1017625423300012199Vadose Zone SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDALIAQIAKNENVKITHQDGS*
Ga0137365_1039861523300012201Vadose Zone SoilMAEAKMVTFHLRNGEQRTYKDIPRLDTSRPHTVLVYHKDALIAQIAKNEIVKITHQDGS*
Ga0137365_1044235623300012201Vadose Zone SoilMAEKKVTFHLRNGEQRTYKGITRLDTSRPHTVLVYHKDELIAQIAKHEIVKTTQQDEG*
Ga0137374_1003016953300012204Vadose Zone SoilMVEKKVTFHLRNGEQRTYKGITRLDTSRPHTVLVYHKDELIAQIAKHEIVKTTQQDEG*
Ga0137362_1088438323300012205Vadose Zone SoilMAEIKKVTFHLRNGEQRTYTGITRLDTSRPHTVLVYHNDVLIAQIAKYDIVKTTQQDEG*
Ga0137380_1043415613300012206Vadose Zone SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLIAQIAKNEIVKITHQDGN*
Ga0137380_1048669123300012206Vadose Zone SoilMAEATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLVAQIAKSDIVKITHQHGN*
Ga0137381_1003086423300012207Vadose Zone SoilMAAMKTVTFHLRNGEQRTYKDITRVDTSRPHTVLIYSHDVLTAQIAKLDIVKITQQDSA*
Ga0137381_1017554133300012207Vadose Zone SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDVLVAQIAKNEIVKITHQDGS
Ga0137378_1008087443300012210Vadose Zone SoilMAEARMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDALIAQIAKNEIVKITHQDGS*
Ga0137386_1086642723300012351Vadose Zone SoilMAEARMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDVLVAQIAKNEIVKITHQDGS*
Ga0137366_1040223223300012354Vadose Zone SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDALIAQIAKNEIAKITHQDGS*
Ga0137360_1059413123300012361Vadose Zone SoilMAEAKLVTFHLRNGEQRIYKDITRLDTSRPHTVLVYHKDVLIAQIAKNDIVKITQQDGR*
Ga0137360_1121078013300012361Vadose Zone SoilMAEIKKVTFHLRNGEQRTYTGITRLDTSRPHTVLVYHNDVLIAQIAKYDIVKTTQQD
Ga0137397_1020115123300012685Vadose Zone SoilMAETKKVTFHLRNGEQRTYKGITRLDTSRPHTVLVYHNDVLIAQIAKNDIVKITQQDGR*
Ga0137396_1073694613300012918Vadose Zone SoilMAEAKLVTFHLRNGEQRIYKDITRLDTSRPHTVLVYHQDVLIAQIAKNDIVKITQQDGG*
Ga0137394_1073990013300012922Vadose Zone SoilMAETKKVTFHLRNGEQRTYKGITRLDTSRPHTVLVYHNDVLIAQIAKYDIVKTTQQDEG*
Ga0137419_1036546723300012925Vadose Zone SoilMMAEAKLVTFHLRNGEQRIYKDITRLDTSRPHTVLVYHQDVLIAQIAKNDIVKIT*
Ga0137416_1049469023300012927Vadose Zone SoilMAEAKLVTFHLRNGDQRIYKDITRLDTSRPHTVLVYHQDVLIAQIAKNDIVKIT*
Ga0137407_1137499623300012930Vadose Zone SoilVTFHLRNGEQRTYKGITRLDTSRPHTVLVYHKDELIAQIAKHEIVKTTQQDVG*
Ga0137410_1070662023300012944Vadose Zone SoilMVTFHLRNGEQRTYKDITRLDTSRPHTALVYYKDTLIAQIAKNDIVRITQQTAR*
Ga0126375_1018537623300012948Tropical Forest SoilMAAATRVTFHLRNGEQRTYNDITRLDTSRPHTVLVYHKDVLVAQIAKNDIVKITQQDGR*
Ga0126375_1087309113300012948Tropical Forest SoilMAEAKMVTFHLRNGEQRTYKDVTRLDTSRPHTVLIYRNDALMAQIAKHDIVKTTQQDARALP*
Ga0126375_1095556613300012948Tropical Forest SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLIAQIAKNEIVQIIQQDSR*
Ga0126375_1096642413300012948Tropical Forest SoilMAETKKVTFHLRNGEQRTYKGITRLDASRPHTVLVYHHNVLIAQIAKHEIVKTIQQDEG*
Ga0126375_1113540123300012948Tropical Forest SoilMAEAKLVTFYLRNGEQRTYKDITRLDTSRPHTVLVYHKDELIAQIAKNDIVRITHQDGS*
Ga0134087_1029944123300012977Grasslands SoilMAEATMVTFHLRNGEQRTYQDITRLDTSRPHTVLVYHKDVLVAQIAKNEIVKITHQEGS*
Ga0180088_107739313300014868SoilMAEAQLVTFHLRNGEQRTYQDITRLDTSRPHTVLVYYQDTLIAQIAKNDIVRVSQQPAR*
Ga0132258_1083550123300015371Arabidopsis RhizosphereMAEAQLVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHQNELIAQIAKNDIVKITREDRK*
Ga0132256_10124707613300015372Arabidopsis RhizosphereMAEVKLVTFHLRNGEQRTYKDITHLDTLRPHTVLVYHKDELIAQIAKNDIVRITHQDES*
Ga0182035_1060963323300016341SoilMAAAKLVTFHLRNGEQRPYNDITRLDTSRPHTVLVYYKDTLIAQIAKSDIVKI
Ga0184626_1017841823300018053Groundwater SedimentMAEAKIVTFHLRNGEQRTYKDVTRLDTSRPHTVLVYYKDVLIAQIAKHEIVKTTQQDAR
Ga0184633_1058913013300018077Groundwater SedimentMAATVTFHLRNGEQRTYKGITRVDTSRPHIVRMYSHDTLIAQIAREDIVRITQQDAA
Ga0184627_1002391433300018079Groundwater SedimentMVTFHLRNGEQRTYKDVTRLDTSRPHVVRVYNKDGLMAQIARHDIVKTTQHNSV
Ga0184627_1020234633300018079Groundwater SedimentMAEAKIVTFHLRNGEQRTYKDVTRLDTSRPHTVLVYYKDVLIAQIARQDIVKTTQQDAR
Ga0184639_1034591023300018082Groundwater SedimentMAETTMVTFHLRNGEQRTYKDVTRLDTSRPHVVRVYHKDGLMAQIARHDIVKTTQHNSV
Ga0184639_1065391623300018082Groundwater SedimentMAEAKIVTFHLRNGEQRTYKDVTRLDTSRPHTVLVYYKDVLIAQIAKHEIVKTTQQDAS
Ga0190268_1212828923300018466SoilMIPQKGGTMVEATMVTFHLRNGEQRTYQDITRLDTSRPHTVLVYYQDTLIAQIAKNDIVRISQQPAR
Ga0184645_129025633300019233Groundwater SedimentMAETKNVTFHLRNGEQRIYKGITRLDTSRPHTVLVYHNDVLIAQIAKHEIVKTTQQDEG
Ga0184641_128369613300019254Groundwater SedimentMAEAKMVTFHLRNGEHRTYKDITRLDMSRPHTVLVYHKDMLIAQIAKHDIVRTTQQNAG
Ga0180115_141065613300019257Groundwater SedimentMVEATMVTFHLRNGEQRTYQDITRLDTSRPHTVLVYYQDTLIAQIAKNDIVRISQQPAR
Ga0187893_1036698513300019487Microbial Mat On RocksMRPEKGGPMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYYKDRLIAQIAKNEIVKIT
Ga0180118_138392823300020063Groundwater SedimentMTLQKGGTMAEGTMVTFHLRNGEQRIYRDITRLDTSRPHTVLVYYKDTLIAQIAKNDIVRISQQPAR
Ga0180113_143525423300020065Groundwater SedimentMIPQKGGTMVEAAMVTFHLRNGEQRTYQDITRLDTSRPHTVLVYYQDTLIAQIAKNDIVRISQQPAR
Ga0194111_1084493923300020083Freshwater LakeMAQGKRVTFHLHNGEQRVYKNITRLDTSRPHTVLVYCQDTLIAQVARHEIVKITQQDET
Ga0212128_1003133633300022563Thermal SpringsMAATQMVTFHLRNGEQRVYKDITRIDTSRPHTVLIYSQDVLIAQIARRDIVKITQHDGA
Ga0212128_1003566143300022563Thermal SpringsMREGETGMAEAKMVTFQLRNGEQRTYKDVTRLDTSRPHTVLIYRNGVLIAQIAKHEIVKTTQQDARALP
Ga0212128_1004161223300022563Thermal SpringsMAAMQTVTLHLRNGEQRTYKDITRLDTSRPHIVRMYSHDTLIAQIAREDIIRITQQDAA
Ga0212128_1035292133300022563Thermal SpringsMATAQTVTFHLRNGEHRTYRGITRVDTSRPHMVRIYSHDTLIAQIAREDIVRITQQDAA
Ga0212128_1041357323300022563Thermal SpringsMAEAKMVTFHLRNGEQRTYTDVTRLDTSRPHTVLVYRNDVLMAQIARHEIIKTTQQEIR
Ga0212128_1070131433300022563Thermal SpringsMAATKMVTFHLRTGDQRVYKDITRIDTSRPHTVLIYSQDVLIAQIARQDIVKITQHDAA
(restricted) Ga0233424_1021786823300023208FreshwaterMAETKTVTFHLRNGEQRVYQDVTRVDISRPHTVLIYHHDRLIAQIARHDIVKTTQQVR
Ga0209399_1026033323300025157Thermal SpringsVMREGETGMAEAKMVTFQLRNGEQRTYKDITRLDTSRPHIVRMYSHDTLIAQIAREDIIRITQQDAA
Ga0207684_1011391433300025910Corn, Switchgrass And Miscanthus RhizosphereMAAVKTVTFHLRNGEQRTYKDITRVDTSRPHTVLIYSHDVLTAQIAKLDIVKITQQDSA
Ga0207684_1106160213300025910Corn, Switchgrass And Miscanthus RhizosphereGKRMAAMKTVTFHLRNGEQRTYRDITRLDTSRPHIVLIYSHDALTAQIARQDIVSITQQDSA
Ga0207712_1044231313300025961Switchgrass RhizosphereMAEAKLVTFYLRNGEQRTYKDITRLDTSRPHTVLVYHKDELIAQIAKNDIVRITHQDES
Ga0207712_1154927323300025961Switchgrass RhizosphereMAEATMVTFHLQNGEQRTYKDITRLDTSRPHTVLVYYKDVLIAQIAKNEIVKIT
Ga0207708_1079304123300026075Corn, Switchgrass And Miscanthus RhizosphereMAEAKIVTLHLRNGEQRTYKDITRLDTSRPHTVLVYYKDVLIAQIAKNEIVKITQQDDR
Ga0207674_1046230923300026116Corn RhizosphereMAAAKIVTLHLRNGEQRTYKDITRLDTSRPHTVLVYYKDVLIAQIAKNEIVKITQQDDR
Ga0207675_10057240513300026118Switchgrass RhizosphereLRNGEQRTYKDITRLDTSRPHTVLVYHKDELIAQIAKNDIVRITHQDES
Ga0209157_133900413300026537SoilMAEAKMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLVAQIAKNEIVKITHQDGS
Ga0209879_101245823300027056Groundwater SandMAETKNVTFHLRNGEQRTYKGITRLDTSRPHTVLVYHNDVLIAQIAKHEIIKTTQQDEG
Ga0209180_1005223523300027846Vadose Zone SoilMAEAKMVTFHLRNGEQRTYQDITRLDTSRPHTVLVYYKDVLIAQIAKSDIVRITQQDGR
Ga0209814_1003729443300027873Populus RhizosphereMAEATMVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKGVLVAQIAKNEIVKITHQDGS
Ga0209465_1000374943300027874Tropical Forest SoilMAAATLVTFHLRNGEQRTYKDITRLDTSRPHTVLVYHKDVLVAQIAKNDIVKITQQDGR
Ga0209465_1065727213300027874Tropical Forest SoilHMVTFHLCNGEQRTYKDVTRLDTSRPHTVLIYRNDALIAQIAKHDIVRTTQQDARALP
Ga0209481_1015339713300027880Populus RhizosphereMAEATMVTFHLHNGEQRTYKDITRLDTSRPHTVLVYHKDVLIAQIAKNEIVKIIQ
Ga0209590_1093245023300027882Vadose Zone SoilMAETKKVTFHLRNGEQRTYTGITRLDTSRPHTVLVYHNDVLIAQIAKYDIVKTTQQDEG
Ga0209488_1027616433300027903Vadose Zone SoilMAEAKLVTFHLRNGEQRIYKDITRLDTSRPHTVLVYHQDVLIAQIAKNDIVKITQQDGR
Ga0207428_1005937933300027907Populus RhizosphereMAEVKLVTFHLRNGEQRTYKDITHLDTLRPHTVLVYHKDELIAQIAKNDIVRITHQDGS
Ga0207428_1025506323300027907Populus RhizosphereMAEATMVTFHLHNGEQRTYKDITRLDTSRPHTVLVYHKDVLIAQIAKNEIVKIIQQDSR
Ga0247822_1133448613300028592SoilAVVELQKKGEAMAEVKLVTFHLRNGEQRTYKDITHLDTLRPHTVLVYHKDELIAQIAKNDIVRITHQDGS
Ga0307504_1005215423300028792SoilMAEAKLVTFHLRNGEQRIYKDITRLDTSRPHTVLVYHQDVLIAQIAKNDIVKIT
Ga0247647_117177123300030570SoilMAEATMMTFHLRNGEQRTYKDITRLDTSRPHTVLVYYQDTLIAQIAKNDIVRISQHPAR
Ga0308206_112329623300030903SoilMAETKKVTFHLRNGEQRTYTGITRLDTSRPHTVLVYHKDELIAQIAKHEIVKTTHQDEG
Ga0308190_104719613300030993SoilMAETKKVTFHLRNGEQRTYTGITRLDTSRPHTVLIYHNDVLIAQIAKHDIVKTTQQDEG
Ga0308197_1021775513300031093SoilMAETKQVTFHLRNGEQRTYKGITRLDTSRPHTVLVYHNDVLIAQIAKHEIIKT
Ga0308194_1004758523300031421SoilMAEKKVTFHLRNGEQRTYTGITRLDTSRPHTVLIYHNDMLIAQIAKHDIVKT
Ga0310887_1010211523300031547SoilVVELQKKGEAMAEVKLVTFHLRNGEQRTYKDITHLDTLRPHTVLVYHKDELIAQIAKNDIVRITHQDGS
Ga0310916_1079135023300031942SoilMAAAKLVTFHLRNGEQRPYNDITRLDTSRPHTVLVYHKDVLIAQIAKNDIVKITQQDGR
Ga0307409_10236128813300031995RhizosphereMAAAKLITFHLRNGEQRTYKDITRLDTSRPHTVLVYHQDKLIAQIAKNDIVRITQQDRR
Ga0314782_013578_1111_12873300034661SoilAEVKLVTFHLRNGEQRTYKDITHLDTLRPHTVLVYHKDELIAQIAKNDIVRITHQDGS
Ga0314782_019166_258_4373300034661SoilMAAAKLVTFHLRNGEQRTYRDITRLDTSRPHTVLVYYKDELIAQIAKNDIVRITQHNGM
Ga0314787_020127_786_9473300034665SoilVTFHLRNGEQRTYRDITRLDTSRPHTVLVYYKDELIAQIAKNDIVRITQHNGM
Ga0314793_004522_70_2493300034668SoilMVEVKLVTFHLRNGEQRTYKDITHLDTLRPHTVLVYHKDELIAQIAKNDIVRITHQDGS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.