NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F027477

Metagenome / Metatranscriptome Family F027477

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F027477
Family Type Metagenome / Metatranscriptome
Number of Sequences 194
Average Sequence Length 47 residues
Representative Sequence WAPLADLKVGPDAAPIPDDIATRLREIERTAAWATPKLELATP
Number of Associated Samples 155
Number of Associated Scaffolds 194

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.48 %
% of genes from short scaffolds (< 2000 bps) 91.75 %
Associated GOLD sequencing projects 142
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.485 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil
(19.072 % of family members)
Environment Ontology (ENVO) Unclassified
(45.876 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.155 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.17%    β-sheet: 0.00%    Coil/Unstructured: 71.83%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 194 Family Scaffolds
PF02511Thy1 86.60
PF07478Dala_Dala_lig_C 10.31
PF13535ATP-grasp_4 1.03
PF01106NifU 0.52
PF04055Radical_SAM 0.52

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 194 Family Scaffolds
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 86.60
COG0694Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domainPosttranslational modification, protein turnover, chaperones [O] 0.52

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.48 %
UnclassifiedrootN/A0.52 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002908|JGI25382J43887_10136766All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300002912|JGI25386J43895_10099939All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300002914|JGI25617J43924_10215216All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300002914|JGI25617J43924_10256522All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300005175|Ga0066673_10500784All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300005180|Ga0066685_10068499All Organisms → cellular organisms → Bacteria2320Open in IMG/M
3300005181|Ga0066678_10042858All Organisms → cellular organisms → Bacteria2540Open in IMG/M
3300005406|Ga0070703_10246468All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300005434|Ga0070709_10473784All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300005440|Ga0070705_100106798All Organisms → cellular organisms → Bacteria1780Open in IMG/M
3300005450|Ga0066682_10127992All Organisms → cellular organisms → Bacteria1609Open in IMG/M
3300005451|Ga0066681_10126529All Organisms → cellular organisms → Bacteria1484Open in IMG/M
3300005451|Ga0066681_10471129All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300005467|Ga0070706_101191340All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300005540|Ga0066697_10086742All Organisms → cellular organisms → Bacteria1811Open in IMG/M
3300005549|Ga0070704_100015864All Organisms → cellular organisms → Bacteria4744Open in IMG/M
3300005554|Ga0066661_10852097All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300005556|Ga0066707_10044793All Organisms → cellular organisms → Bacteria2536Open in IMG/M
3300005556|Ga0066707_10277273All Organisms → cellular organisms → Bacteria1096Open in IMG/M
3300005557|Ga0066704_10858089All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300005558|Ga0066698_11030866All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300005560|Ga0066670_10331914All Organisms → cellular organisms → Bacteria926Open in IMG/M
3300005569|Ga0066705_10572411All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300005586|Ga0066691_10517638All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300005598|Ga0066706_10127462All Organisms → cellular organisms → Bacteria1887Open in IMG/M
3300005598|Ga0066706_10820641All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300005883|Ga0075299_1042013All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes523Open in IMG/M
3300006031|Ga0066651_10437118All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300006031|Ga0066651_10489226All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300006034|Ga0066656_10064155All Organisms → cellular organisms → Bacteria2153Open in IMG/M
3300006755|Ga0079222_10356404All Organisms → cellular organisms → Bacteria991Open in IMG/M
3300006797|Ga0066659_10028803All Organisms → cellular organisms → Bacteria3293Open in IMG/M
3300006797|Ga0066659_11674243All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300006806|Ga0079220_10097638All Organisms → cellular organisms → Bacteria1515Open in IMG/M
3300006844|Ga0075428_101331868All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300006845|Ga0075421_100541504All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300006846|Ga0075430_100846655All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300006847|Ga0075431_100795969All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300006903|Ga0075426_10848798All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300006914|Ga0075436_100291602All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300007004|Ga0079218_10370385All Organisms → cellular organisms → Bacteria1204Open in IMG/M
3300007258|Ga0099793_10672417All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300007265|Ga0099794_10068756All Organisms → cellular organisms → Bacteria1732Open in IMG/M
3300009038|Ga0099829_10162256All Organisms → cellular organisms → Bacteria1791Open in IMG/M
3300009088|Ga0099830_10059737All Organisms → cellular organisms → Bacteria2724Open in IMG/M
3300009100|Ga0075418_10684499All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300009137|Ga0066709_100720054All Organisms → cellular organisms → Bacteria1437Open in IMG/M
3300009147|Ga0114129_11693897All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300010140|Ga0127456_1004924All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300010142|Ga0127483_1094870All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300010301|Ga0134070_10020075All Organisms → cellular organisms → Bacteria2169Open in IMG/M
3300010304|Ga0134088_10069464All Organisms → cellular organisms → Bacteria1636Open in IMG/M
3300010304|Ga0134088_10700410All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300010322|Ga0134084_10002668All Organisms → cellular organisms → Bacteria3938Open in IMG/M
3300010322|Ga0134084_10018164All Organisms → cellular organisms → Bacteria1859Open in IMG/M
3300010322|Ga0134084_10129346All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300010322|Ga0134084_10409914All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium531Open in IMG/M
3300010323|Ga0134086_10036976All Organisms → cellular organisms → Bacteria1626Open in IMG/M
3300010323|Ga0134086_10177507All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300010323|Ga0134086_10203537All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300010323|Ga0134086_10285746All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300010325|Ga0134064_10046079All Organisms → cellular organisms → Bacteria1325Open in IMG/M
3300010326|Ga0134065_10189511All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300010336|Ga0134071_10105859All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300010337|Ga0134062_10194134All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300010359|Ga0126376_10038330All Organisms → cellular organisms → Bacteria3308Open in IMG/M
3300010360|Ga0126372_11264022All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300010399|Ga0134127_11444047All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300010399|Ga0134127_11728269All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300010400|Ga0134122_12236930All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium591Open in IMG/M
3300010403|Ga0134123_12251574All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300011270|Ga0137391_10290191All Organisms → cellular organisms → Bacteria1412Open in IMG/M
3300011429|Ga0137455_1074757All Organisms → cellular organisms → Bacteria976Open in IMG/M
3300012198|Ga0137364_10955541All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300012200|Ga0137382_10163274All Organisms → cellular organisms → Bacteria1516Open in IMG/M
3300012207|Ga0137381_10329353All Organisms → cellular organisms → Bacteria1331Open in IMG/M
3300012208|Ga0137376_10625542All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300012285|Ga0137370_10362568All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300012349|Ga0137387_10921812All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300012351|Ga0137386_10602828All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300012353|Ga0137367_10122658All Organisms → cellular organisms → Bacteria1907Open in IMG/M
3300012353|Ga0137367_11033598All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300012354|Ga0137366_10125324All Organisms → cellular organisms → Bacteria1939Open in IMG/M
3300012354|Ga0137366_11065250All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300012356|Ga0137371_10317056All Organisms → cellular organisms → Bacteria1213Open in IMG/M
3300012356|Ga0137371_11171621All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300012362|Ga0137361_10106691All Organisms → cellular organisms → Bacteria2446Open in IMG/M
3300012392|Ga0134043_1034253All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300012398|Ga0134051_1180814All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300012400|Ga0134048_1194022All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300012409|Ga0134045_1389580All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300012683|Ga0137398_10116440All Organisms → cellular organisms → Bacteria1701Open in IMG/M
3300012918|Ga0137396_10494965All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300012923|Ga0137359_11778726All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012924|Ga0137413_11186026All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300012924|Ga0137413_11494716All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300012925|Ga0137419_11867478All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300012929|Ga0137404_11891627All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300012931|Ga0153915_10363379All Organisms → cellular organisms → Bacteria1631Open in IMG/M
3300012944|Ga0137410_10047888All Organisms → cellular organisms → Bacteria3038Open in IMG/M
3300012944|Ga0137410_11085918All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300012972|Ga0134077_10374332All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300012976|Ga0134076_10047080All Organisms → cellular organisms → Bacteria1618Open in IMG/M
3300012976|Ga0134076_10414763All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300013297|Ga0157378_11101993All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300014154|Ga0134075_10331568All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300014166|Ga0134079_10122143All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300015053|Ga0137405_1345460Not Available2632Open in IMG/M
3300015264|Ga0137403_11276333All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300015357|Ga0134072_10439873All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300015358|Ga0134089_10231708All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300015358|Ga0134089_10237139All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300015359|Ga0134085_10020678All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2507Open in IMG/M
3300015359|Ga0134085_10196702All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300015359|Ga0134085_10200628All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300015359|Ga0134085_10230492All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300017654|Ga0134069_1028025All Organisms → cellular organisms → Bacteria1717Open in IMG/M
3300017654|Ga0134069_1071199All Organisms → cellular organisms → Bacteria1111Open in IMG/M
3300017654|Ga0134069_1165786All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300017656|Ga0134112_10520448All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300017966|Ga0187776_10130117All Organisms → cellular organisms → Bacteria1529Open in IMG/M
3300017966|Ga0187776_11153424All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300018058|Ga0187766_10839033All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300018063|Ga0184637_10221364All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300018077|Ga0184633_10389182All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300018431|Ga0066655_11025358All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300018433|Ga0066667_10587296All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300018433|Ga0066667_12353712All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300018482|Ga0066669_10149876All Organisms → cellular organisms → Bacteria1714Open in IMG/M
3300019879|Ga0193723_1133677All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300021081|Ga0210379_10072229All Organisms → cellular organisms → Bacteria1407Open in IMG/M
3300021086|Ga0179596_10684620All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300022195|Ga0222625_1360587All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300022694|Ga0222623_10037930All Organisms → cellular organisms → Bacteria1845Open in IMG/M
3300024330|Ga0137417_1457240All Organisms → cellular organisms → Bacteria1722Open in IMG/M
3300025318|Ga0209519_10794357All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300025885|Ga0207653_10218314All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300025906|Ga0207699_10436851All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300025910|Ga0207684_10967016All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300026005|Ga0208285_1023720All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300026285|Ga0209438_1002783All Organisms → cellular organisms → Bacteria5860Open in IMG/M
3300026296|Ga0209235_1059764All Organisms → cellular organisms → Bacteria1786Open in IMG/M
3300026298|Ga0209236_1091408All Organisms → cellular organisms → Bacteria1388Open in IMG/M
3300026300|Ga0209027_1066903All Organisms → cellular organisms → Bacteria1337Open in IMG/M
3300026301|Ga0209238_1050906All Organisms → cellular organisms → Bacteria1489Open in IMG/M
3300026301|Ga0209238_1210321All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300026307|Ga0209469_1037932All Organisms → cellular organisms → Bacteria1577Open in IMG/M
3300026314|Ga0209268_1075446All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300026320|Ga0209131_1322616All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300026323|Ga0209472_1226679All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300026323|Ga0209472_1285931All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300026324|Ga0209470_1014455All Organisms → cellular organisms → Bacteria4515Open in IMG/M
3300026331|Ga0209267_1290712All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300026523|Ga0209808_1118566All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300026529|Ga0209806_1154003All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300026536|Ga0209058_1184854All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300026537|Ga0209157_1084769All Organisms → cellular organisms → Bacteria1545Open in IMG/M
3300026537|Ga0209157_1191969All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300026540|Ga0209376_1256731All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300026548|Ga0209161_10540357All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300026552|Ga0209577_10365192All Organisms → cellular organisms → Bacteria1056Open in IMG/M
3300026700|Ga0208474_100136All Organisms → cellular organisms → Bacteria1443Open in IMG/M
3300027273|Ga0209886_1069561All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300027324|Ga0209845_1076912All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300027775|Ga0209177_10506688All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300027787|Ga0209074_10369929All Organisms → cellular organisms → Bacteria593Open in IMG/M
(restricted) 3300027799|Ga0233416_10267828All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300027846|Ga0209180_10087814All Organisms → cellular organisms → Bacteria1762Open in IMG/M
3300027846|Ga0209180_10674651All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300027862|Ga0209701_10084406All Organisms → cellular organisms → Bacteria1998Open in IMG/M
3300028536|Ga0137415_10191463All Organisms → cellular organisms → Bacteria1867Open in IMG/M
3300028793|Ga0307299_10199208All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300028803|Ga0307281_10179764All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300030620|Ga0302046_10462340All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300030998|Ga0073996_11204280All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300031152|Ga0307501_10260453All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium520Open in IMG/M
3300031200|Ga0307496_10086331All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300031421|Ga0308194_10089958All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300031421|Ga0308194_10152087All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300031720|Ga0307469_10163715All Organisms → cellular organisms → Bacteria1686Open in IMG/M
3300031720|Ga0307469_10204487All Organisms → cellular organisms → Bacteria1546Open in IMG/M
3300031720|Ga0307469_10555575All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300031720|Ga0307469_11439719All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300031720|Ga0307469_12013592All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300031720|Ga0307469_12160253All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300031740|Ga0307468_101235260All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300031949|Ga0214473_12063972All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300032180|Ga0307471_103479499All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300032180|Ga0307471_103914665All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300032782|Ga0335082_11098031All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300033407|Ga0214472_10833648All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300033813|Ga0364928_0124242All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300034177|Ga0364932_0148316All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300034178|Ga0364934_0223588All Organisms → cellular organisms → Bacteria713Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil19.07%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil18.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil18.04%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil8.25%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.12%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.12%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.12%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.58%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.06%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.55%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.55%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.03%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.03%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.03%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.03%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.03%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.03%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.52%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.52%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.52%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.52%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.52%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.52%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005883Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010140Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010142Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012400Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012409Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025318Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026005Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101 (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026700Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN350 (SPAdes)EnvironmentalOpen in IMG/M
3300027273Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027324Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027799 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MGEnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300030998Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031200Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_SEnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033813Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17EnvironmentalOpen in IMG/M
3300034177Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI25382J43887_1013676633300002908Grasslands SoilKVGAGAAPIPDDIASRLRELERTAGWATPKASLAESPGP*
JGI25386J43895_1009993913300002912Grasslands SoilGVIIPSADWAPLADLKVGPEAAPIPDDIAARLREVERTAGWATPKLDLATPSPQAPNP*
JGI25617J43924_1021521623300002914Grasslands SoilGPDAAAIPDDIAAGLRAIERSAGWAAAKLELVREPAAPDR*
JGI25617J43924_1025652223300002914Grasslands SoilFRELKRAYDARSILNPDVILPAVDWAPLADLKVGPDAASIPDDIATQLRAIERSAGWAVPKLELAREPAAPDS*
Ga0066673_1050078423300005175SoilLNPGVILPAAGWEGAPLADLKVGADAAGIPDDIARRLREIERTAAWATPKTSLADT*
Ga0066685_1006849913300005180SoilKRAYDPLSIFNPGVIIPANDWSPVAALKMGAEAAVIPDDIATRLREVERSAAWATPKLELTR*
Ga0066678_1004285813300005181SoilNPGVIIPSADWAPLVDLKVGPEAAPIPDDIARRLRELEQTAGWATPKLDLTTPSS*
Ga0070703_1024646813300005406Corn, Switchgrass And Miscanthus RhizosphereAYDAAAIFNPGVIIPSADWAPLADLKVGPTAAPIPDDIAARLRDVERTAGWAIPKLDLAVPTP*
Ga0070709_1047378413300005434Corn, Switchgrass And Miscanthus RhizosphereSADWAPLADLKVGPTAAPIPDDIAARLRDVERTAGWAISKLDLVNP*
Ga0070705_10010679813300005440Corn, Switchgrass And Miscanthus RhizosphereAPLAALKVGDGAAAIPDDIASRLRDVERNAAWATPKLELTHPTPST*
Ga0066682_1012799213300005450SoilGVIIPSADWAPLAELKVGPDRAPMPDDIATRLREIERTAGWATPKLELARPSGHPTPDT*
Ga0066681_1012652913300005451SoilAYDPLSIFNPGVIIPANDWSPVAALKVGAEAAAIPDDIATRLREVERSAAWATPKLELTR
Ga0066681_1047112923300005451SoilSPLDALKVGDGAAAIPDDIATRLRDVERSAAWATPKPELARQTPET*
Ga0070706_10119134023300005467Corn, Switchgrass And Miscanthus RhizosphereGVIIPATDWSPVGALKVGDQAAAIPDDIATRLREVERSAAWATPKLELAH*
Ga0066697_1008674213300005540SoilNPGVIIPTADWAPLADLKVGPAAAPIPDDIAARLREIERTAGWATPKLELARFPEPRAPSS*
Ga0070704_10001586463300005549Corn, Switchgrass And Miscanthus RhizosphereWSPVAALKVGVDAAAIPDDIATRLREVERSAAWDTPKLDLTR*
Ga0066661_1085209713300005554SoilAALKVGAGAAAIPEDIATRLREVERSAAWATPKLELAH*
Ga0066707_1004479343300005556SoilVIIPTADWSPLAALKVGDETAIIPEDIATRLREVERSAAWATPKLELAL*
Ga0066707_1027727313300005556SoilLKVGPDAAPIPDDIAARLREIERTAGWSVPKLDLAREPLTPGT*
Ga0066704_1085808923300005557SoilPGVILPAADWAPLAELKVGPDAAPIPDDIAARLRELERAAAWGTPKLELARAAPSP*
Ga0066698_1103086623300005558SoilGVILPAADWTPLADLKVGPAAAPIPDDIAARLRDLERQGGWATPKPELAR*
Ga0066670_1033191413300005560SoilADWAPFAGLKVGADAAPIPDDIAARLRDIERTAGWATPKLDLALAP*
Ga0066705_1057241123300005569SoilGADAAGIPDDIARRLREIERTAAWATPKTSLADT*
Ga0066691_1051763813300005586SoilDWSPLDALKVGDGAAAIPDDIATRLRDVERSAAWATPKPELARQTPET*
Ga0066706_1012746233300005598SoilAYDPLSIFNPGVIIPANDWSPVAALKMGAEAAVIPDDIATRLREVERSAAWATPKLELTR
Ga0066706_1082064113300005598SoilKVGPDAAPIPGDIAARLREIERTAGWATPKLELARSSSP*
Ga0075299_104201323300005883Rice Paddy SoilFADVKRAYDPLSIFNPGVIIPASDWSPIAALKVGDDAAAIPEDIATRLREVERNAAWATTKLQLAR*
Ga0066651_1043711823300006031SoilWSPVAALKVGADAAAIPDDIATRLREVERRAAWDTPKLELTR*
Ga0066651_1048922613300006031SoilGVILPAADWAPLADLKVGPDAAPIPDDIAARLREIERTAGWATPKLELARSSSP*
Ga0066656_1006415543300006034SoilNPGVIIPATDWSPVAALKVGAGAAVIPDDIATRLRDVERNAAWATPKLELTR*
Ga0079222_1035640413300006755Agricultural SoilGVIIPATDWSPVAALKVGAGAAAIPDDIATRLRDVERSAAWATPKAELAQ*
Ga0066659_1002880353300006797SoilGPDRAPMPDDIATRLREIERTAGWATPKLELARPSGHPTPDT*
Ga0066659_1167424313300006797SoilIPSADWAPLADLKVGPTAAPIPDDIAARLREIERTAAWATPKLELARSSSPEPRAPNP*
Ga0079220_1009763833300006806Agricultural SoilDWTALADLKVGPAAAQLPDDIAVRLRDVERTAGWAIPKSELARPRHPTPDT*
Ga0075428_10133186823300006844Populus RhizosphereADWAPLADLKVGPEAAPIPDDIAARLREIERRAAWATPKLDLAR*
Ga0075421_10054150433300006845Populus RhizosphereGVIIPATGWSPLAALKIGDEAAAIPDDIATRLRDVERNAAWATSKLQLAR*
Ga0075430_10084665523300006846Populus RhizosphereKVGPEAAPIPDDIAGRLREVERAGAWSTPKLDLAR*
Ga0075431_10079596923300006847Populus RhizosphereATDWLPLAALKVGAGAAAIPDDIATRLREVERSAAWGTPKLELTRQTPNP*
Ga0075426_1084879823300006903Populus RhizosphereLADLKVGPAAAQLPDDIAVRLRDVERTAGWATPKSELARPRHPTPDT*
Ga0075436_10029160213300006914Populus RhizosphereHPQPGCYNPLGQWAPLADLKVGPDAAPIPDDIAARLREVERAAGWAVPKVELARESPTTDP*
Ga0079218_1037038533300007004Agricultural SoilLTIFNPGVIIPAPGWSPLAALKVGDEAAVIPDDIATRLRDVERSAAWGIPKLELTQPTPVT*
Ga0099793_1067241723300007258Vadose Zone SoilPLADLKVGPEAAPIPADIAARLRDVERNAGWATPKLDLATRAPKP*
Ga0099794_1006875633300007265Vadose Zone SoilPAADWAPLTELKVGPDAAAIPDDIAARLRDTERNAAWGVLKLDLARADTPNPAPDT*
Ga0099829_1016225633300009038Vadose Zone SoilGVILPAADWAPLAELKVGPDVAPIPDDIAARLRELERTAAWGTPKLELARATP*
Ga0099830_1005973743300009088Vadose Zone SoilWAPLADLKVGPDAAPIPDDIATRLREIERTAAWATPKLELATP*
Ga0075418_1068449923300009100Populus RhizosphereIPATGWSPLAALKIGAEAAAIPDDIATRLRDVERNAAWAIPKLELARPSP*
Ga0066709_10072005413300009137Grasslands SoilLKVGAGAAAIPEDIATRLREVERSAAWATPKLELAH*
Ga0114129_1169389713300009147Populus RhizosphereADWAPLASLKVGEDAAAIPDDIAARLRETERNAAWATPKLELAR*
Ga0127456_100492423300010140Grasslands SoilVGADAAGIPDDIARRLREIERTAAWATPKTSLADT*
Ga0127483_109487013300010142Grasslands SoilVGAGAAAIPDDIAMRLREVERSAAWATPKLELTRQTP*
Ga0134070_1002007513300010301Grasslands SoilALKVGAEAAAIPDDIATRLREVERSAAWATPKLELTR*
Ga0134088_1006946443300010304Grasslands SoilDWSPVAALKMGAEAAVIPDDIATRLREVERSAAWATPKLELTR*
Ga0134088_1070041013300010304Grasslands SoilNVKRAYDPLTIFNPGVIIPATDWSPLDALKVGDGAAAIPDDIATRLRDVERSAAWATPKPELARQTPET*
Ga0134084_1000266863300010322Grasslands SoilVILPAADWAPLADLKVGPDAAPIPDDIAARLREIERTAGWATPKLELARSSSPESQAPSP
Ga0134084_1001816413300010322Grasslands SoilSIFNPGVIIPSADWAPLADLKVGPAAAAIPDDIAARLREVERTAGWAIPKLDLVKP*
Ga0134084_1012934623300010322Grasslands SoilSPVAALKVGADAAAIPDDIATRLRELERSAAWDTAKLELTR*
Ga0134084_1040991423300010322Grasslands SoilLKVGADAAPIPDDIGDRLRDIERTAGWATPKLDLVRRSLTPDT*
Ga0134086_1003697613300010323Grasslands SoilADWAPLADVKVGAGAAPIPDDIAGRLRELERTAAWSTPKTTLAGT*
Ga0134086_1017750723300010323Grasslands SoilVIIPASDWSPVTALKVGAGAAAIPEDIATRLREVERSAAWATPKLELAY*
Ga0134086_1020353713300010323Grasslands SoilVAALKVGAGAAVIPDDIATRLRDVERNAAWATPKLELTR*
Ga0134086_1028574613300010323Grasslands SoilLKVGPEAAPIPDDIAARLREVERTAGWATPKLDLATPGP*
Ga0134064_1004607933300010325Grasslands SoilDWAPLADLKVGPAAAPIPDDIAARLREIERTAGWATPKLELDRSPEPRAPSP*
Ga0134065_1018951113300010326Grasslands SoilPVAALKMGAEAAVIPDDIATRLREVERSAAWATPKLELTR*
Ga0134071_1010585933300010336Grasslands SoilLKVGAGAADIPEDIATRLREVERSAAWATPKLELAH*
Ga0134062_1019413423300010337Grasslands SoilVIIPATDWSPLATLKVGADAAAIPDDIAGKLRDMERSAAWATPKLELIR*
Ga0126376_1003833033300010359Tropical Forest SoilVGDGAAPIPDDIAQRLREIERNAGWAIPKTDVSRTP*
Ga0126372_1126402223300010360Tropical Forest SoilWSPLGDLKVGDGAALIPDDIAHRLRDIERNAGWATPKSELARLP*
Ga0134127_1144404713300010399Terrestrial SoilPLAALKVGDGAAAIPDDIASRLRDVERNAAWATPKLELTHPTPST*
Ga0134127_1172826913300010399Terrestrial SoilIPATDWSPLAALKVGEDAAAIPDDIATQLRDVERSAAWATPKRQLAR*
Ga0134122_1223693023300010400Terrestrial SoilGVIIPAPDWNPLVDLKVGTDAAPIPDDIAARLRDVERSAGWGISKRELTRRL*
Ga0134123_1225157423300010403Terrestrial SoilEWAPLADLKVGPEATPIPDDIAARLREMERTAGWATPKLDLATPSP*
Ga0137391_1029019133300011270Vadose Zone SoilLKVGPEAASIPDDIAARLREVERTAGWATPKLDLATPNP*
Ga0137455_107475713300011429SoilKVGEDAAAIPDDIAARLRDMERNAGWATPKPELAR*
Ga0137364_1095554123300012198Vadose Zone SoilDLKVGPDAAPIPDDIAARLREIEQTAGWATPKLELARSSSP*
Ga0137382_1016327413300012200Vadose Zone SoilIPASDWSPVTALKVGAGAAAIPEDIATRLREVERSAAWATPKLELAH*
Ga0137381_1032935333300012207Vadose Zone SoilIIPSAEWAPLADLKVGPGAAPLPNDIAAGLREIERTAGWATPKLDLARASDT*
Ga0137376_1062554223300012208Vadose Zone SoilTALKVGAGAAAIPEDIATRLREVERSAAWATPKLELAH*
Ga0137370_1036256813300012285Vadose Zone SoilILPSPEWAPLADLKVGADAAAIPGDIAARLREVERAAAWAVPKVELARESPTPDP*
Ga0137387_1092181223300012349Vadose Zone SoilLADLKVGAGAAPIPDDIAARLRELERTATWSTPKTTLAGT*
Ga0137386_1060282813300012351Vadose Zone SoilPPPDWTPLADLKVGREVMQIPEDIAHRLREVERTAGWATPKLELASPNP*
Ga0137367_1012265833300012353Vadose Zone SoilGVIIPATDWSPVAALKVGEGAAVIPEDIATRLREVERSAAWATPKLELAH*
Ga0137367_1103359823300012353Vadose Zone SoilAALKIGAGAAVIPEDIATRLREVERSAAWATPKRELAR*
Ga0137366_1012532413300012354Vadose Zone SoilPLAALKVGEGAAPIPDDIAARLREVERTASWATPKLDLVRSLTPDP*
Ga0137366_1106525013300012354Vadose Zone SoilLPAADWAPLADVKVGAGAAPIPDDIAGRLRELERTAAWSTPKTTLAGT*
Ga0137371_1031705633300012356Vadose Zone SoilWAPLADLKVGPEAAPIPDDIAARLREVERTAGWATPKLDLATPSPQAPNP*
Ga0137371_1117162123300012356Vadose Zone SoilADWAPLADLKVGPEAAPIPDDIAARLREVERTAGWATPKLDLATSSPQAPNP*
Ga0137361_1010669113300012362Vadose Zone SoilLKVGPEAAPIPHDIAARLREVERTAGWAIPKLDLATPSP*
Ga0134043_103425313300012392Grasslands SoilFNPGVIIPATDWSPVAALKVGAGAAAIPDDIAMRLREVERSAAWATPKLELTRQTP*
Ga0134051_118081413300012398Grasslands SoilSPVTALKVGAGAAAIPEDIATRLREVERSAAWATPKLELAH*
Ga0134048_119402223300012400Grasslands SoilLKVGAGAAAIPEDIATRLREVERSAAWATPKPELAH*
Ga0134045_138958023300012409Grasslands SoilLKVGAEAAVIPDDIATRLREVERSAAWATPKLELTR*
Ga0137398_1011644033300012683Vadose Zone SoilILPAADWQPLAELKVGAAAASIPDDIALRLRDVERSGGWAVPKPELAR*
Ga0137396_1049496513300012918Vadose Zone SoilWSPLATLKVGDGAPAIPEDIATRLREVERSAAWATPKFELAH*
Ga0137359_1177872613300012923Vadose Zone SoilGVIIPSADWAPLADLKVGPAAAPIADDIAARLRDVERTAGWATPKLDLATPSP*
Ga0137413_1118602623300012924Vadose Zone SoilDLKVGPEAMPIPDDIARRLRELERNAGWATPKLELATPSP*
Ga0137413_1149471613300012924Vadose Zone SoilGVIIPASDWSPVTALKVGAGAAAIPEDIATRLREVERSAAWATPKLELAH*
Ga0137419_1186747813300012925Vadose Zone SoilAADWAPLAALKVGEDAAVIPDDIAARLRELERAAGWATPKLELAR*
Ga0137404_1189162713300012929Vadose Zone SoilPLADLKVGPEATPIPDDIARRLRELERTAGWATPKLDLARAADT*
Ga0153915_1036337913300012931Freshwater WetlandsKVGPDAAPIPDDIAARLRDIERTGGWATPKQDLARLP*
Ga0137410_1004788843300012944Vadose Zone SoilVAALKVGAGAAAIPEDIATRLREVERSAAWATPKLELAH*
Ga0137410_1108591813300012944Vadose Zone SoilAADWQPLAELKVGAAAASIPDDIALRLRDVERSGGWAVPKPELAR*
Ga0134077_1037433213300012972Grasslands SoilALKVGDGAAAIPDDIATRLRDVERSAAWATPKPELARQTPET*
Ga0134076_1004708033300012976Grasslands SoilGVIIPATDWSPLDALKVGDGAAAIPDDIATRLRDVERSAAWATPKPELARQTPET*
Ga0134076_1041476313300012976Grasslands SoilLPSPEWAPLVDLKVGADVAPIPDDIAARLREIERTAGWPAPKLELARSSNPEPPAPSP*
Ga0157378_1110199323300013297Miscanthus RhizosphereVILPAADWAPLRDLKVGPDAAPIPDDIAGRLRDTERNATWSVPKLELAAPRHRTPDT*
Ga0134075_1033156823300014154Grasslands SoilSIFNPGVIIPATDWSPVAALKVGAGAADIPEDIATRLREVERSAAWATPKLELAH*
Ga0134079_1012214323300014166Grasslands SoilFNPGVIIPAADWSPVAALKVGAGAAAIPEDIATRLREVERSAAWATPKLELAR*
Ga0137405_134546013300015053Vadose Zone SoilNPLADWAPLADLRSGPRRRRSHDDIAARLREVERTAGWATPKLDFATPSP*
Ga0137403_1127633313300015264Vadose Zone SoilVGPEATPIPDDIAARLRQVEQSANWAIPKLELATRAANP*
Ga0134072_1043987323300015357Grasslands SoilDWSPVAALKVGAGAAAIPEDIAMRLREVERSAAWAIPKLELAH*
Ga0134089_1023170813300015358Grasslands SoilPPPDWTPLADLKVGREVMQIPENIAHRLREVERTAGWATPKLELASPNP*
Ga0134089_1023713923300015358Grasslands SoilAPLADLKVGPDAAPIPDDIAARLREIERTAGWSVPKLDLAREPLTPGT*
Ga0134085_1002067843300015359Grasslands SoilVIIPATDWSPVAALKVGAGAAVIPEDIATRLREVERSAAWATPKLELAH*
Ga0134085_1019670223300015359Grasslands SoilPGVIIPAPDWTPLADLKVGPATAAIPDDIAARLREVERTAGWATPKYELARPDT*
Ga0134085_1020062813300015359Grasslands SoilPLADLKVGPEAAPIPDDIAARLREVERTAGWATPKLDLATPGPQAPNP*
Ga0134085_1023049213300015359Grasslands SoilDLQVGPDAAPSPSATAARLRDVERTAAWASPKVELARESPTPDP*
Ga0134069_102802533300017654Grasslands SoilLPAADWAPLADVKVGAGAAPIPDDIAGRLRELERTAAWSTPKTTLAGT
Ga0134069_107119923300017654Grasslands SoilWAPLADLKVGPEAAPIPDDIAARLREVERTAGWATPKLDLATSSPQAPNP
Ga0134069_116578623300017654Grasslands SoilDWAPLAELKVGPDRVPMPDDIATRLREIERTAGWATPKLELARPSGHPTPDT
Ga0134112_1052044813300017656Grasslands SoilVAALKVGDRAADIPEDIATRLRDVERNAAWATPKLALTQ
Ga0187776_1013011713300017966Tropical PeatlandADLKVGPDAARIPDDIAARLRDVERNAAWSVPKLELATLTPET
Ga0187776_1115342423300017966Tropical PeatlandLTHLKVGDGAVPIPDDIALRLRETERTAGWATPKTDLARAP
Ga0187766_1083903313300018058Tropical PeatlandAADWSPLADLKVGPDAAPIPADIAARLRDTERNAAWGAPKLDLATLTPHT
Ga0184637_1022136413300018063Groundwater SedimentLKVGERAAAIPDDIAARLREVERSAAWATPKVALATPEPLAPSP
Ga0184633_1038918223300018077Groundwater SedimentAAAADWAPLAALKVGERAAAIPDDIAARLREVERSAAWATPKVALATPEPLAPSP
Ga0066655_1102535823300018431Grasslands SoilDLKVGADAAGIPDDIARRLREIERTAAWATPKTSLADT
Ga0066667_1058729623300018433Grasslands SoilLADLKVGADAAPIPGDIAARLREVERAATWAVPKVELARESPTPDP
Ga0066667_1235371213300018433Grasslands SoilAGSMFNPGVIIPSADWAPLADLKVGPGAAPIPDDIAARLREVERTAGWAIPKLDLVKP
Ga0066669_1014987633300018482Grasslands SoilGPEATPIPDDIAARLREVERTAGWATPKLDLTTPSS
Ga0193723_113367713300019879SoilVILPAADWGPLHDLKVGPDAAPIPDDIAARLRDTERNASWNVPKLDLTQPVVPDT
Ga0210379_1007222913300021081Groundwater SedimentADLKVGPSAAPIPEDIAARLRAVEREGGWATPKTELAR
Ga0179596_1068462013300021086Vadose Zone SoilLSIFNPGVIIPATDWSPVAALKIGAGAAVIPEDIATRLREVERSAAWATPKRELAR
Ga0222625_136058713300022195Groundwater SedimentPVAALKIGAGAAVIPEDIATRLREVERSAAWATPKLELAH
Ga0222623_1003793033300022694Groundwater SedimentLKVGEDAAAIPDDIAARLRDVERTAGWATPKLELAR
Ga0137417_145724033300024330Vadose Zone SoilVGPEAMPIPDDIARRLRELERNAGWATPKLELATPSP
Ga0209519_1079435713300025318SoilVIIPAADWAPLAALKVGEDAAPIPDDIAARLRELERAAGWATPKPELAR
Ga0207653_1021831413300025885Corn, Switchgrass And Miscanthus RhizosphereAYDAAAIFNPGVIIPSADWAPLADLKVGPTAAPIPDDIAARLRDVERTAGWAIPKLDLAVPTP
Ga0207699_1043685113300025906Corn, Switchgrass And Miscanthus RhizosphereDLKVGPTAAPIPDDIAARLRDVERTAGWAISKLDLVNP
Ga0207684_1096701613300025910Corn, Switchgrass And Miscanthus RhizosphereATDWSPVGALKVGDQAAAIPDDIATRLREVERSAAWATPKLELAH
Ga0208285_102372023300026005Rice Paddy SoilADLKVGDGAAAIPDDIAGRLRGLERNAAWSTPKLDLTRQP
Ga0209438_100278373300026285Grasslands SoilVAADWAPLAELKVGEHAAAIPDDIAARLREMERTAGWATPKLELAR
Ga0209235_105976413300026296Grasslands SoilPSAEWAPLADLKVGPDAAPIPDDIAQRLRDIERTAGWATPKLELARSPSPEPLAPSP
Ga0209236_109140833300026298Grasslands SoilAPLADLKVGPEAAPIPHDIAARLREVERTAGWAIPKLDLATPSP
Ga0209027_106690333300026300Grasslands SoilDAGSMFNPGVIIPSADWAPLADLKVGPGAAPIPDDIAARLREVERTAGWAIPKLDLVKP
Ga0209238_105090613300026301Grasslands SoilILPSPEWAPLADLKVGPDAAPIPGDIATRLREIEQTAGWATPKLELARSSSP
Ga0209238_121032123300026301Grasslands SoilLADLKVGPGAAPIPDDIAARLREIERTAGWAISKLDLVKP
Ga0209469_103793213300026307SoilATDWAPLANLKVGPDATPIPDDIAHRLRALEQGAGWATPKTELAN
Ga0209268_107544613300026314SoilIIPSADWAPLAELKVGPDRAPMPDDIATRLREIERTAGWATPKLELARPSGHPTPDT
Ga0209131_132261613300026320Grasslands SoilPAADWQPLADLKVGAAAAPIPDDIALRLRDVERSGGWAVPKPELAR
Ga0209472_122667923300026323SoilVGPATAAIPDDIAARLREVERTAGWATPKYELARPDT
Ga0209472_128593113300026323SoilPVAALKVGDRAADIPEDIATRLRDVERNAAWATPKLALTQ
Ga0209470_101445513300026324SoilAAPIPGDIAARLRDVERTAAWAVPKVELARESPTPDP
Ga0209267_129071223300026331SoilVIIPATDWSPVAALKVGDDAAAIPEDIATRLREVERSAAWATPKLELAH
Ga0209808_111856633300026523SoilPGVIIPATDWSPVAALKVGDDAVAIPEDIATRLREVERSAAWATPKLELAH
Ga0209806_115400313300026529SoilDWAPLADLKVGPDAAPIPDDIAARLREIERTAGWSVPKLDLAREPLTPGT
Ga0209058_118485413300026536SoilKVGPEATPIPDDIAARLREVERTAGWATPKLDLAAASL
Ga0209157_108476933300026537SoilPDAAPIPEDVAVRLREIERTAGWATPKLDLVRNTLTPDT
Ga0209157_119196913300026537SoilPSADWAPLADLKVGPEAAPIPDDIARRLRDTERNAAWGVPKFELATPSP
Ga0209376_125673123300026540SoilPSADWAPLADLKVGPEAAPIPHDIAARLREVERTAGWAIPKLDLATPSP
Ga0209161_1054035713300026548SoilPGVIIPSAEWAPLADLKVGPDAAPIPGDIAARLRDVERTAAWAVPKVELARESPTPDP
Ga0209577_1036519213300026552SoilADLKVGPEATPIPDDIAARLREVERTAGWATPKLDLTTPSS
Ga0208474_10013613300026700SoilDAAAIFNPGVIIPSADWAPLADLKVGATAAPIPDDIAARLRDVERTAGWAIPKLDLVNP
Ga0209886_106956123300027273Groundwater SandDWAPLADLKVGPSAAPIPDDIAARLRAVEREGGWATPKTELAR
Ga0209845_107691213300027324Groundwater SandPFADLKVGPSAAPIPDDIAARLRAVEREGGWATPKTELAR
Ga0209177_1050668813300027775Agricultural SoilQPLADLKVGDAAAPIPDDIALRLRDVERSGGWAVPKPELAR
Ga0209074_1036992913300027787Agricultural SoilKVGPAAAQLPDDIAVRLRDVERTAGWATPKSELASPRHPTPDT
(restricted) Ga0233416_1026782823300027799SedimentPLAALKVGPAAAAIPDDIAARLRHLERAAAWHTPKTELAR
Ga0209180_1008781413300027846Vadose Zone SoilPGVIIPSADWAPLADLKVGPEAAPIPADIAARLRDVERNAGWATPKLDLATRAPKP
Ga0209180_1067465113300027846Vadose Zone SoilIIPSAEWAPLADLKVGPEATPIPDDIAARLREVERTAGWATPKLDLATPSP
Ga0209701_1008440613300027862Vadose Zone SoilWAPLADLKVGPDAAPIPDDIATRLREIERTAAWATPKLELATP
Ga0137415_1019146313300028536Vadose Zone SoilPAADWAPLVDLKVGAAATPIPDDIAARLRELERTASWATPKTSLADSPGT
Ga0307299_1019920823300028793SoilKVGEDAAAIPDDIAARLRDVERAAGWATPKLELAR
Ga0307281_1017976423300028803SoilLKVGEGAAPIPDDIAVRLRAVERGAEWAILKTGLAD
Ga0302046_1046234023300030620SoilTDWAPLVDLKVGDRVAPIPDDIASRLREIERAAAWATPKTELAGPPARSGG
Ga0073996_1120428013300030998SoilALKVGDEAAAIPEDIATRLREVERSAAWATPKLELAH
Ga0307501_1026045313300031152SoilPGVIIPAADWAPLAALKVGEDAAAIPDDIAARLRELERSAGWATPKLELAR
Ga0307496_1008633113300031200SoilKVGDGAAPIPEDIATRLREVEHTAGWSTPKLDLARAPTPDT
Ga0308194_1008995823300031421SoilALKVGAGAAAIPEDIATRLREVERNAAWATPKLALAH
Ga0308194_1015208723300031421SoilSPVTALKVGAGAAAIPDDIATRLREVERSAAWATPKRELAR
Ga0307469_1016371533300031720Hardwood Forest SoilDWSPLDALKVGDGAAAIPDDIATRLRDVERNAAWATPKPELARRTPET
Ga0307469_1020448713300031720Hardwood Forest SoilAALKVGEDAAAIPDDIATQLRDVERSAAWATPKRQLAR
Ga0307469_1055557513300031720Hardwood Forest SoilPAADWAPLADVKAGADAAAIPDDIARRLREIERTAAWATPKTSLADT
Ga0307469_1143971923300031720Hardwood Forest SoilPLAALKVGEDAAAIPDDIAARLRELERAAGWATPKLELAR
Ga0307469_1201359223300031720Hardwood Forest SoilAADWAPLLDLKVGPDAAPIPDDIAGRLRDTERNAAWSIPKLDLI
Ga0307469_1216025313300031720Hardwood Forest SoilSIFNPGVIIPATDWSPVAALKVGAGAADIPEDIATRLREVERSAAWATQKLELAR
Ga0307468_10123526013300031740Hardwood Forest SoilIIPATDWSPVAALKVGADAAAIPDDIATRLREMERSAAWDTPKLDLTR
Ga0214473_1206397223300031949SoilWAPLADLKVGEAAAPIPDDIAARLRAVERTAEWAVPKTGLAD
Ga0307471_10347949923300032180Hardwood Forest SoilPRCSFNPGVIIPTANWAPLADLKVGPEATPIPDDIAGRLRELERTAGWATPKLDLARAPD
Ga0307471_10391466513300032180Hardwood Forest SoilDWAPLADLKVGPTAAPIPDDIAARLRDVERTAGWAIPKLDLAVPSP
Ga0335082_1109803123300032782SoilKVGPEAAPIPDDIARRLREIERSGGWAVPKLDLARSSDP
Ga0214472_1083364823300033407SoilSPLAELKVGNGAAAIPEDIATRLREVERSAAWATPKLEMARPNP
Ga0364928_0124242_455_6193300033813SedimentVFNPGVIVPAAAWAPLADLKVGEAAAPIPDDIAARLRAVERGAEWAVPKTGLAD
Ga0364932_0148316_3_1163300034177SedimentDLKVGPSAAPIPDDIAARLRAVEREGGWATPKTELAR
Ga0364934_0223588_1_1203300034178SedimentLADLKVGPEAAPIPDDIAARLRDVERRAAWATPKLELAR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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