NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F027361

Metagenome / Metatranscriptome Family F027361

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F027361
Family Type Metagenome / Metatranscriptome
Number of Sequences 195
Average Sequence Length 63 residues
Representative Sequence MATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLSKIKANLRRKAAKAK
Number of Associated Samples 167
Number of Associated Scaffolds 195

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 46.15 %
% of genes near scaffold ends (potentially truncated) 23.08 %
% of genes from short scaffolds (< 2000 bps) 77.44 %
Associated GOLD sequencing projects 160
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (94.872 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(10.256 % of family members)
Environment Ontology (ENVO) Unclassified
(22.051 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(29.231 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.67%    β-sheet: 8.89%    Coil/Unstructured: 44.44%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 195 Family Scaffolds
PF04264YceI 1.54
PF10543ORF6N 1.54
PF09210BE_C 1.03
PF14018DUF4234 1.03
PF05067Mn_catalase 1.03
PF01027Bax1-I 1.03
PF13541ChlI 1.03
PF01408GFO_IDH_MocA 1.03
PF04480DUF559 1.03
PF07705CARDB 1.03
PF01223Endonuclease_NS 1.03
PF14066DUF4256 1.03
PF08327AHSA1 1.03
PF04255DUF433 1.03
PF04715Anth_synt_I_N 0.51
PF11903ParD_like 0.51
PF06969HemN_C 0.51
PF03352Adenine_glyco 0.51
PF13282DUF4070 0.51
PF02796HTH_7 0.51
PF01261AP_endonuc_2 0.51
PF01381HTH_3 0.51
PF03477ATP-cone 0.51
PF01502PRA-CH 0.51
PF02673BacA 0.51
PF11188DUF2975 0.51
PF02929Bgal_small_N 0.51
PF00437T2SSE 0.51
PF00753Lactamase_B 0.51
PF00202Aminotran_3 0.51
PF10431ClpB_D2-small 0.51
PF13544Obsolete Pfam Family 0.51
PF01507PAPS_reduct 0.51
PF00171Aldedh 0.51
PF07963N_methyl 0.51
PF00483NTP_transferase 0.51
PF02769AIRS_C 0.51
PF13365Trypsin_2 0.51
PF11999Ice_binding 0.51
PF07394DUF1501 0.51
PF08531Bac_rhamnosid_N 0.51
PF00294PfkB 0.51
PF02604PhdYeFM_antitox 0.51
PF08843AbiEii 0.51
PF13277YmdB 0.51
PF00196GerE 0.51
PF13561adh_short_C2 0.51
PF00923TAL_FSA 0.51
PF00730HhH-GPD 0.51
PF05016ParE_toxin 0.51
PF01569PAP2 0.51
PF07228SpoIIE 0.51
PF02472ExbD 0.51
PF00578AhpC-TSA 0.51
PF02666PS_Dcarbxylase 0.51
PF13646HEAT_2 0.51
PF02470MlaD 0.51
PF13589HATPase_c_3 0.51
PF12796Ank_2 0.51
PF01040UbiA 0.51
PF13565HTH_32 0.51
PF01751Toprim 0.51
PF09722Xre_MbcA_ParS_C 0.51
PF13280WYL 0.51
PF01264Chorismate_synt 0.51
PF14579HHH_6 0.51
PF14338Mrr_N 0.51

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 195 Family Scaffolds
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 1.54
COG3546Mn-containing catalase (includes spore coat protein CotJC)Inorganic ion transport and metabolism [P] 1.03
COG0147Anthranilate/para-aminobenzoate synthases component IAmino acid transport and metabolism [E] 1.03
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 1.03
COG1543Predicted glycosyl hydrolase, contains GH57 and DUF1957 domainsCarbohydrate transport and metabolism [G] 1.03
COG1864DNA/RNA endonuclease G, NUC1Nucleotide transport and metabolism [F] 1.03
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.51
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.51
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.51
COG3250Beta-galactosidase/beta-glucuronidaseCarbohydrate transport and metabolism [G] 0.51
COG28183-methyladenine DNA glycosylase TagReplication, recombination and repair [L] 0.51
COG2253Predicted nucleotidyltransferase component of viral defense systemDefense mechanisms [V] 0.51
COG22313-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamilyReplication, recombination and repair [L] 0.51
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.51
COG1968Undecaprenyl pyrophosphate phosphataseLipid transport and metabolism [I] 0.51
COG1194Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairsReplication, recombination and repair [L] 0.51
COG1059Thermostable 8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 0.51
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.51
COG0848Biopolymer transport protein ExbDIntracellular trafficking, secretion, and vesicular transport [U] 0.51
COG0688Phosphatidylserine decarboxylaseLipid transport and metabolism [I] 0.51
COG0635Coproporphyrinogen-III oxidase HemN (oxygen-independent) or related Fe-S oxidoreductaseCoenzyme transport and metabolism [H] 0.51
COG0177Endonuclease IIIReplication, recombination and repair [L] 0.51
COG0176Transaldolase/fructose-6-phosphate aldolaseCarbohydrate transport and metabolism [G] 0.51
COG0139Phosphoribosyl-AMP cyclohydrolaseAmino acid transport and metabolism [E] 0.51
COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 0.51
COG0082Chorismate synthaseAmino acid transport and metabolism [E] 0.51


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.87 %
UnclassifiedrootN/A5.13 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918008|ConsensusfromContig261022All Organisms → cellular organisms → Bacteria672Open in IMG/M
2170459005|F1BAP7Q01BAVCBAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium500Open in IMG/M
2199352012|2200534807All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae2376Open in IMG/M
3300000956|JGI10216J12902_124533586All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium557Open in IMG/M
3300001213|JGIcombinedJ13530_101510793All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium619Open in IMG/M
3300001213|JGIcombinedJ13530_105399857All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia699Open in IMG/M
3300001380|JGI1356J14229_10028480All Organisms → cellular organisms → Bacteria3249Open in IMG/M
3300002071|JGIcombinedJ21915_10098589All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1173Open in IMG/M
3300003310|D1draft_1002300All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia15038Open in IMG/M
3300003320|rootH2_10340914Not Available1253Open in IMG/M
3300004091|Ga0062387_100145327All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1357Open in IMG/M
3300004091|Ga0062387_100510777All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium841Open in IMG/M
3300004092|Ga0062389_100336736All Organisms → cellular organisms → Bacteria1598Open in IMG/M
3300004153|Ga0063455_101647025All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia507Open in IMG/M
3300004266|Ga0055457_10070792All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium893Open in IMG/M
3300004635|Ga0062388_101355821All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300004643|Ga0062591_101311596All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium712Open in IMG/M
3300004643|Ga0062591_102400203All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium552Open in IMG/M
3300005172|Ga0066683_10215315All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1187Open in IMG/M
3300005183|Ga0068993_10223294All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium661Open in IMG/M
3300005364|Ga0070673_102063188All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia541Open in IMG/M
3300005439|Ga0070711_102003812All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia509Open in IMG/M
3300005553|Ga0066695_10229526All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1169Open in IMG/M
3300005824|Ga0074474_1217466All Organisms → cellular organisms → Bacteria1798Open in IMG/M
3300005825|Ga0074476_1168561All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia679Open in IMG/M
3300005836|Ga0074470_10094756All Organisms → cellular organisms → Bacteria4602Open in IMG/M
3300005836|Ga0074470_11642496All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1195Open in IMG/M
3300005993|Ga0080027_10094934All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300006052|Ga0075029_100210036All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1218Open in IMG/M
3300006055|Ga0097691_1116119All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium756Open in IMG/M
3300007519|Ga0105055_10000615All Organisms → cellular organisms → Bacteria56475Open in IMG/M
3300007775|Ga0102953_1092931All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1349Open in IMG/M
3300009012|Ga0066710_100707742All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1536Open in IMG/M
3300009012|Ga0066710_101717026All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium954Open in IMG/M
3300009012|Ga0066710_104450823All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium523Open in IMG/M
3300009089|Ga0099828_10513333All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1080Open in IMG/M
3300009093|Ga0105240_10409816All Organisms → cellular organisms → Bacteria1525Open in IMG/M
3300009137|Ga0066709_101540129All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium956Open in IMG/M
3300009147|Ga0114129_12009020All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium699Open in IMG/M
3300009185|Ga0114971_10752675Not Available530Open in IMG/M
3300009502|Ga0114951_10050690All Organisms → cellular organisms → Bacteria2507Open in IMG/M
3300009502|Ga0114951_10070953All Organisms → cellular organisms → Bacteria2040Open in IMG/M
3300009618|Ga0116127_1101308All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium756Open in IMG/M
3300009630|Ga0116114_1005562All Organisms → cellular organisms → Bacteria4544Open in IMG/M
3300009637|Ga0116118_1229915All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia574Open in IMG/M
3300009639|Ga0116122_1158415All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium718Open in IMG/M
3300009640|Ga0116126_1220377All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium604Open in IMG/M
3300009678|Ga0105252_10574593All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium520Open in IMG/M
3300009685|Ga0116142_10000166All Organisms → cellular organisms → Bacteria86758Open in IMG/M
3300010160|Ga0114967_10017905All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia5056Open in IMG/M
3300010343|Ga0074044_10288604All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1080Open in IMG/M
3300010392|Ga0118731_112392828All Organisms → cellular organisms → Bacteria1087Open in IMG/M
3300010399|Ga0134127_13035737All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium547Open in IMG/M
3300010400|Ga0134122_10871818All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia868Open in IMG/M
3300010400|Ga0134122_12153642All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia600Open in IMG/M
3300010403|Ga0134123_12657685Not Available568Open in IMG/M
3300010885|Ga0133913_10452128All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium3390Open in IMG/M
3300011415|Ga0137325_1051881All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium874Open in IMG/M
3300011422|Ga0137425_1069246All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium824Open in IMG/M
3300011429|Ga0137455_1180348All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300011431|Ga0137438_1205994All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium598Open in IMG/M
3300011439|Ga0137432_1031955All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1551Open in IMG/M
3300011440|Ga0137433_1031765All Organisms → cellular organisms → Bacteria1544Open in IMG/M
3300011442|Ga0137437_1028649All Organisms → cellular organisms → Bacteria1912Open in IMG/M
3300011443|Ga0137457_1204831All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium671Open in IMG/M
3300012039|Ga0137421_1210769Not Available568Open in IMG/M
3300012166|Ga0137350_1044769All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium856Open in IMG/M
3300012189|Ga0137388_10108510All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales2398Open in IMG/M
3300012189|Ga0137388_10231609All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1676Open in IMG/M
3300012189|Ga0137388_11053723All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales749Open in IMG/M
3300012189|Ga0137388_11361602All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium649Open in IMG/M
3300012200|Ga0137382_10015054All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia4277Open in IMG/M
3300012200|Ga0137382_10669282All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium743Open in IMG/M
3300012206|Ga0137380_11400956All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium584Open in IMG/M
3300012212|Ga0150985_107218769All Organisms → cellular organisms → Bacteria1263Open in IMG/M
3300012232|Ga0137435_1120609All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia794Open in IMG/M
3300012362|Ga0137361_10486611All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1133Open in IMG/M
3300012411|Ga0153880_1472605All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium948Open in IMG/M
3300012469|Ga0150984_110244386All Organisms → cellular organisms → Bacteria1777Open in IMG/M
3300012895|Ga0157309_10105492All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter786Open in IMG/M
3300012922|Ga0137394_10597654All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium933Open in IMG/M
3300012922|Ga0137394_10656820All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium884Open in IMG/M
3300012922|Ga0137394_11469682All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium541Open in IMG/M
3300012923|Ga0137359_10333646All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1349Open in IMG/M
3300012929|Ga0137404_10264765All Organisms → cellular organisms → Bacteria1480Open in IMG/M
3300012930|Ga0137407_10094873All Organisms → cellular organisms → Bacteria2544Open in IMG/M
3300012930|Ga0137407_11939222All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter562Open in IMG/M
3300012944|Ga0137410_10023379All Organisms → cellular organisms → Bacteria4276Open in IMG/M
3300012956|Ga0154020_10098271All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2879Open in IMG/M
3300012984|Ga0164309_10038700All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2683Open in IMG/M
3300012985|Ga0164308_11764033All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium576Open in IMG/M
3300013308|Ga0157375_12291347All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria644Open in IMG/M
3300014158|Ga0181521_10510371All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium574Open in IMG/M
3300014160|Ga0181517_10000278All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula71828Open in IMG/M
3300014166|Ga0134079_10167806All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium898Open in IMG/M
3300014167|Ga0181528_10002325All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia11657Open in IMG/M
3300014199|Ga0181535_10016801All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula6172Open in IMG/M
3300014201|Ga0181537_10418813All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium919Open in IMG/M
3300014326|Ga0157380_11446617All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales739Open in IMG/M
3300014489|Ga0182018_10000632All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula44318Open in IMG/M
3300014490|Ga0182010_10336655All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300014491|Ga0182014_10049701All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2907Open in IMG/M
3300014492|Ga0182013_10645266All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium535Open in IMG/M
3300014493|Ga0182016_10000083All Organisms → cellular organisms → Bacteria97580Open in IMG/M
3300014493|Ga0182016_10011782All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula8424Open in IMG/M
3300014494|Ga0182017_10796666All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium570Open in IMG/M
3300014495|Ga0182015_10839858All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium576Open in IMG/M
3300014499|Ga0182012_10000091All Organisms → cellular organisms → Bacteria94693Open in IMG/M
3300014499|Ga0182012_10005616All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia12958Open in IMG/M
3300014499|Ga0182012_10387624Not Available924Open in IMG/M
3300014501|Ga0182024_10453148All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1644Open in IMG/M
3300014502|Ga0182021_10221044All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2216Open in IMG/M
3300014655|Ga0181516_10232941All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium935Open in IMG/M
3300014838|Ga0182030_10058976All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula5926Open in IMG/M
3300014838|Ga0182030_10513415All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1191Open in IMG/M
3300014839|Ga0182027_10872491All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium934Open in IMG/M
3300015245|Ga0137409_11292765All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium572Open in IMG/M
3300015264|Ga0137403_10368265All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1321Open in IMG/M
3300017935|Ga0187848_10245189All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales758Open in IMG/M
3300017973|Ga0187780_10390084All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium987Open in IMG/M
3300017988|Ga0181520_10028470All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium5960Open in IMG/M
3300018009|Ga0187884_10465875All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium508Open in IMG/M
3300018013|Ga0187873_1235486All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium679Open in IMG/M
3300018023|Ga0187889_10150336All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1104Open in IMG/M
3300018024|Ga0187881_10413423All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium552Open in IMG/M
3300018035|Ga0187875_10362152All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium778Open in IMG/M
3300018044|Ga0187890_10513924All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300018046|Ga0187851_10875433All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium505Open in IMG/M
3300018071|Ga0184618_10474314All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium526Open in IMG/M
3300018083|Ga0184628_10218437All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300018083|Ga0184628_10595315All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium560Open in IMG/M
3300018481|Ga0190271_10646528All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1179Open in IMG/M
3300018481|Ga0190271_11327645All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales839Open in IMG/M
3300019230|Ga0181501_1247689All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium667Open in IMG/M
3300020214|Ga0194132_10552521All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium560Open in IMG/M
3300021344|Ga0193719_10355309All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium609Open in IMG/M
3300021519|Ga0194048_10129986Not Available955Open in IMG/M
3300023101|Ga0224557_1137787All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia921Open in IMG/M
(restricted) 3300024054|Ga0233425_10016850All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales7330Open in IMG/M
3300024056|Ga0124853_1511025All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1550Open in IMG/M
3300025784|Ga0209200_1000945All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula31253Open in IMG/M
3300025916|Ga0207663_11689534All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter509Open in IMG/M
3300026023|Ga0207677_11828443All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium564Open in IMG/M
3300027655|Ga0209388_1065931All Organisms → cellular organisms → Bacteria1043Open in IMG/M
3300027819|Ga0209514_10084056Not Available1952Open in IMG/M
3300027832|Ga0209491_10000358All Organisms → cellular organisms → Bacteria89999Open in IMG/M
3300027898|Ga0209067_10022420All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales3239Open in IMG/M
3300027908|Ga0209006_10286772All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1408Open in IMG/M
3300028766|Ga0302269_1134672Not Available713Open in IMG/M
3300028804|Ga0268298_10192626All Organisms → cellular organisms → Bacteria1117Open in IMG/M
3300029911|Ga0311361_10034491All Organisms → cellular organisms → Bacteria8700Open in IMG/M
3300029914|Ga0311359_11144170All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium514Open in IMG/M
3300029915|Ga0311358_10100253All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2968Open in IMG/M
3300029915|Ga0311358_10755910All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia704Open in IMG/M
3300029922|Ga0311363_10110015All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula3733Open in IMG/M
3300029922|Ga0311363_10563188All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300030044|Ga0302281_10079775All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1561Open in IMG/M
3300030044|Ga0302281_10133475All Organisms → cellular organisms → Bacteria → Proteobacteria1104Open in IMG/M
3300030620|Ga0302046_11186208All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium601Open in IMG/M
3300030923|Ga0138296_1312852All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia640Open in IMG/M
3300031057|Ga0170834_107362088All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1199Open in IMG/M
3300031128|Ga0170823_14170445All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300031232|Ga0302323_100630585All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1164Open in IMG/M
3300031232|Ga0302323_101531736All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium751Open in IMG/M
3300031236|Ga0302324_100184850All Organisms → cellular organisms → Bacteria3352Open in IMG/M
3300031236|Ga0302324_100999789All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1137Open in IMG/M
3300031251|Ga0265327_10143814All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter1112Open in IMG/M
3300031524|Ga0302320_10128770All Organisms → cellular organisms → Bacteria3918Open in IMG/M
3300031525|Ga0302326_13062568All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia569Open in IMG/M
3300031708|Ga0310686_105365393All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300031726|Ga0302321_100604675All Organisms → cellular organisms → Bacteria1222Open in IMG/M
3300031759|Ga0316219_1225429All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia664Open in IMG/M
3300031788|Ga0302319_10417451All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1487Open in IMG/M
3300032018|Ga0315272_10285158Not Available800Open in IMG/M
3300032143|Ga0315292_10347343Not Available1241Open in IMG/M
3300032144|Ga0315910_10027976All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales4147Open in IMG/M
3300032156|Ga0315295_11458025All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium661Open in IMG/M
3300032173|Ga0315268_12507931All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium529Open in IMG/M
3300032177|Ga0315276_11371775All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium740Open in IMG/M
3300032256|Ga0315271_10617138All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300032256|Ga0315271_11447339All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium592Open in IMG/M
3300032397|Ga0315287_10130929All Organisms → cellular organisms → Bacteria2883Open in IMG/M
3300032515|Ga0348332_11665143All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium645Open in IMG/M
3300032516|Ga0315273_11249073All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia932Open in IMG/M
3300032562|Ga0316226_1003208All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales14298Open in IMG/M
3300032668|Ga0316230_1085396All Organisms → cellular organisms → Bacteria → PVC group1284Open in IMG/M
3300032770|Ga0335085_11372409All Organisms → cellular organisms → Bacteria → PVC group742Open in IMG/M
3300032892|Ga0335081_10399947All Organisms → cellular organisms → Bacteria1768Open in IMG/M
3300032893|Ga0335069_11531600All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium717Open in IMG/M
3300032897|Ga0335071_11796339All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter557Open in IMG/M
3300033402|Ga0326728_10117531All Organisms → cellular organisms → Bacteria3080Open in IMG/M
3300033402|Ga0326728_10633132All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia823Open in IMG/M
3300033755|Ga0371489_0004303All Organisms → cellular organisms → Bacteria16127Open in IMG/M
3300033823|Ga0334837_006038All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia6344Open in IMG/M
3300034257|Ga0370495_0225988All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium608Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.26%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil6.15%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment4.62%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.62%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog4.62%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.59%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen3.59%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog3.59%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.56%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.05%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)2.05%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.05%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.05%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.05%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen2.05%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater1.54%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.54%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.54%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.54%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.54%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.03%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater1.03%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater1.03%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.03%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland1.03%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.03%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.03%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.03%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa1.03%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.03%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.03%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge1.03%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.51%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.51%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.51%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.51%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.51%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.51%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.51%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.51%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.51%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.51%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.51%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.51%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.51%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.51%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.51%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.51%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.51%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.51%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.51%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.51%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.51%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.51%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.51%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.51%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.51%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.51%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.51%
Rice-Straw Enriched CompostEngineered → Solid Waste → Grass → Composting → Bioreactor → Rice-Straw Enriched Compost0.51%
Active SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge0.51%
Activated SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge0.51%
Down-Flow Hanging Sponge ReactorEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Down-Flow Hanging Sponge Reactor0.51%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918008Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_allEnvironmentalOpen in IMG/M
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2199352012Mesophilic microbial community from rice straw/compost enrichment Sample: eDNA_1EngineeredOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300001380Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 mEnvironmentalOpen in IMG/M
3300002071Barrow Graham LP Ref core NGADG0011-312 (Barrow Graham LP Ref core NGADG0011-312,NGADG0011-212, ASSEMBLY_DATE=20131010)EnvironmentalOpen in IMG/M
3300003310Down-flow hanging sponge reactor microbial communities from the University of Illinois at Urbana-Champaign, USA - L1-648F-DHSEngineeredOpen in IMG/M
3300003320Sugarcane root Sample H2Host-AssociatedOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004266Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005183Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005824Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.180_BBCEnvironmentalOpen in IMG/M
3300005825Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.184_BBBEnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300007519Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03EnvironmentalOpen in IMG/M
3300007775Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MGEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009185Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaGEnvironmentalOpen in IMG/M
3300009502Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaGEnvironmentalOpen in IMG/M
3300009618Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100EnvironmentalOpen in IMG/M
3300009630Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40EnvironmentalOpen in IMG/M
3300009637Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40EnvironmentalOpen in IMG/M
3300009639Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40EnvironmentalOpen in IMG/M
3300009640Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40EnvironmentalOpen in IMG/M
3300009678Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100EnvironmentalOpen in IMG/M
3300009685Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaGEngineeredOpen in IMG/M
3300010160Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaGEnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011415Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2EnvironmentalOpen in IMG/M
3300011422Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2EnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300011431Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2EnvironmentalOpen in IMG/M
3300011439Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2EnvironmentalOpen in IMG/M
3300011440Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300011443Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2EnvironmentalOpen in IMG/M
3300012039Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2EnvironmentalOpen in IMG/M
3300012166Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012232Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2EnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012411Freshwater microbial communities from Lake Alinen Mustaj?rvi, Finland - AM7a metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012895Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012956Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MGEngineeredOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014167Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaGEnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014491Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018024Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019230Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020214Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015054 Kigoma Offshore 80mEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021519Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5mEnvironmentalOpen in IMG/M
3300023101Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14EnvironmentalOpen in IMG/M
3300024054 (restricted)Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_140_MGEnvironmentalOpen in IMG/M
3300024056Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300025784Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027819Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)EnvironmentalOpen in IMG/M
3300027832Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028766Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2EnvironmentalOpen in IMG/M
3300028804Activated sludge microbial communities from WWTP in Nijmegen, Gelderland, Netherland - WWTP WeurtEngineeredOpen in IMG/M
3300029911III_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029922III_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300030044Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300030923Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031251Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaGHost-AssociatedOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031759Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003PEnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300032018Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middleEnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300032562Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017EnvironmentalOpen in IMG/M
3300032668Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033755Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fractionEnvironmentalOpen in IMG/M
3300033823Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34EnvironmentalOpen in IMG/M
3300034257Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Bog_all_C_008699702140918008SoilMAAASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKGEGVSTLSKIKANLRRKAAAKSK
E41_106418002170459005Grass SoilMATAKQVQKNLQAAMREALRIQDRFVAEPLLPKTGRGHLKSEGVSTIFKIKSSLRRNPRE
22010282322199352012Rice-Straw Enriched CompostMATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGHLKSEGISTISKIKANLSRKKASKPK
JGI10216J12902_12453358613300000956SoilMATASQVQKNLQAAMREALRIQDRFVAEPLFSKTGRGYLKSEGVSTLSKIKANLRRKAAKAK*
JGIcombinedJ13530_10151079323300001213WetlandMAAASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKGEGVSTLSKIKSNLRRKATAKSK*
JGIcombinedJ13530_10539985723300001213WetlandMATATQVQKNLQAAMREALRIQDRFVAEPLFARTGRGHLKSEGVSTLSKIKANLRRKAAKSK*
JGI1356J14229_1002848023300001380GroundwaterMADSTQIQRNLRAAMKEALRIQDRFVAEPVFAKTGRGYVKSEGVSPIHRIKANQHRSTTAKPA*
JGIcombinedJ21915_1009858943300002071Arctic Peat SoilMAAATQVQKNLQAAMREALRLQDRFVAEPLFAKTGRGYLKSEGVTALKRIKANLRRHAARSR*
D1draft_100230023300003310Down-Flow Hanging Sponge ReactorMATAPQVQKNLRAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTISKIKANLRRKAAKAK*
rootH2_1034091433300003320Sugarcane Root And Bulk SoilMATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGHLKSEGVSTLGKIKANLRRKAARAK*
Ga0062387_10014532723300004091Bog Forest SoilMAALTKVEKNLRAAMRDALRIQNRFVPEPLFAKTGRGYLKREGVSTLQKVKSRK*
Ga0062387_10051077733300004091Bog Forest SoilMADSVQIQKNLRAAMKEALRIQDRFVAEPVFAKTGRGYLKSEGVSTIHKIKANLRRSISRKSG*
Ga0062389_10033673633300004092Bog Forest SoilGIDWMGIQHYCLGMASASQIQANLRAAMKDALRIQDRFVPEPVFAKTGRGHLKSEGVSTLHKIKAGVRHRSPAKAR*
Ga0063455_10164702513300004153SoilQRNLRAAMKEALRMQDRFVGEPVFAKTGRGYLKSEGVSTIQKIKANLRRKASLKGE*
Ga0055457_1007079233300004266Natural And Restored WetlandsQKNLQAAMREALRIQDRFVAEPLFARTGRGHLKSEGVSTIGKIKANLRRKAAKKK*
Ga0062388_10135582133300004635Bog Forest SoilQVQKNLRAAMKEALRIQDRFVAEPVFAKTGRGYLKSEGVSTIHKIKANLRRSISRKSG*
Ga0062591_10131159613300004643SoilMAGLSQAEKNLRAAMKEALRIQDRFVAEPVFAKTGRGYLKSEGVHTIQKIKAGLRKKASHKAE*
Ga0062591_10240020313300004643SoilMATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTIAKIKANLRRKAAKAK*
Ga0066683_1021531523300005172SoilMATASQVHKNLRAAMREALRIQDRFVAEPRFAKTGRGYLKSEGVSTLSKIKANLRRKTATRSK*
Ga0068993_1022329423300005183Natural And Restored WetlandsMATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSSISKIKANLRRKAAKAK*
Ga0070673_10206318813300005364Switchgrass RhizosphereFAAAVDRSKFARQSSPMSTASQVQKNLQAAMREALRIQDRFVAEPLFARTGRGHLKSEGVSTLNKIKTSLRRKAAKAK*
Ga0070711_10200381213300005439Corn, Switchgrass And Miscanthus RhizosphereGIIYSMADSKVQRNLRAAMKEALRIQDRFVAEPLFAKTGRGYLKSDGVSSLQKIKANLRRKAALKGA*
Ga0066695_1022952623300005553SoilMAGASQVQRNLQAAMREALRIQDRFVAEPLFAKTGRGHLKSEGVSTLKKIKANLRRKTAARSK*
Ga0074474_121746623300005824Sediment (Intertidal)MATASQVQTNLQAAMREALRIQDRFVPEPLFARTGRGQLKSEGVSTIGKIKATPSSRLAIQ*
Ga0074476_116856123300005825Sediment (Intertidal)MATPSQVQKNLKAAMREALRIQDRFEAEPLFAKTGRGHLKSEGVSTISKIKANLRRKTGKAK*
Ga0074470_1009475653300005836Sediment (Intertidal)MATASQVQKNLQAAMREALRIQDRFVPEPLFAKTGRGHLKSEGVSALSKIKANLRRKAARAK*
Ga0074470_1164249623300005836Sediment (Intertidal)MATATQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGHLKSEGVSTLGKIKANLRRKAARAK*
Ga0080027_1009493423300005993Prmafrost SoilMGSVGQIQANLRAAMKDALRIHDRVVPEPVFAKTGRGHLKSEGVSTFHKIKAGVRHRSSAKAK*
Ga0075029_10021003643300006052WatershedsAATTQVQKNLRAAMHEALRIQDRFVAEPLFSKTGRGHLKSEGVSTLQSIKANLQR*
Ga0097691_111611913300006055Arctic Peat SoilVRQNLHAAMREALRIQDRFVPEPLFAKTGRGYLKGEGVSTLNEIKANLRRKPAAKAR*
Ga0105055_10000615173300007519FreshwaterMATASQVQKNLKAAMREALRIQDRFEAEPLFAKTGRGHLKSEGVSTISKIKANLRRKTDKAK*
Ga0102953_109293133300007775SoilMAAATQAQKNLQAAMREALRIQDRFVAEPLFAETGRGHLKSEGVSTVSKIKANLRRKTAKTKAK*
Ga0066710_10070774233300009012Grasslands SoilMAAVSQVEKNLRAAMREALRIQDRFMAEPRFAKTGRGYLKSEAISTLSKIKANLRRKTATRSK
Ga0066710_10171702623300009012Grasslands SoilMATASQVHKNLRAAMREALRIQDRFVAEPRFAKTGRGYLKSEGVSTLSKIKANLRRKTATRSK
Ga0066710_10445082313300009012Grasslands SoilMAAVSQVEKNLRAAMREALRIQDRFVAEPRFAKTERGYPKSEAISTLSKIKANLRRKTATRSK
Ga0099828_1051333323300009089Vadose Zone SoilMAGSSQVQKNLRAAMKEALRLQDRFVAEPVFGKTGQGYLKSEGVSTIQKIKTHLRKKISRKSG*
Ga0105240_1040981613300009093Corn RhizosphereMADSAKVRRNLRAALKEALRIQGRFVAEPVFAKTGRGYLKSEGVSTIQKIKSNLHRKGSLKGA*
Ga0066709_10154012933300009137Grasslands SoilMICSMADSAKVQRNLRAAMKEALRIQDRFVAEPVFAKTGRGYLKSEGVSTIQKIKANLPGKVSRKGA*
Ga0114129_1200902013300009147Populus RhizosphereMATASQVKKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLNKIKANLRRKAARAK*
Ga0114971_1075267513300009185Freshwater LakeMAAVSRVQQNLQAAMRDALRIQDRVIAETLFAKSIHDYFKSEGVPTLQKIKSNLRRKRAEKTK
Ga0114951_1005069043300009502FreshwaterVQKNLQAAMREALRIQDRFTAEPLFAKTGRGYLKGEGVATLNKIKSNLRRKAASKSK*
Ga0114951_1007095323300009502FreshwaterMAAASQVQKNLRAAMREALRIQDRFTAEPLFARTGRGYLKAEDVSTLNKIKANLRRQPAAKSK*
Ga0116127_110130823300009618PeatlandNLQAAMREALRIQDRFVAEPLFAKTGRGYLKGEGVSTLNKIKANLRRKTAAKSK*
Ga0116114_100556253300009630PeatlandMAAVSQVQKNLQAAMREALRIQDRFVPEPLFAKTGRGYLKGEGVSTLSKIKANLRRKAAAKSK*
Ga0116118_122991523300009637PeatlandMAATSQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKGEGVSTLSKIKANLRRKAAAKSK*
Ga0116122_115841523300009639PeatlandMAATSQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKGEGVSTLNKIKANLRRKTAAKSK*
Ga0116126_122037713300009640PeatlandRTTSLQGVDRAKFWRQPLCMAATSQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKGEGVSTLNKIKANLRRKTAAKSK*
Ga0105252_1057459313300009678SoilMATASQVQKNLRAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLGKIKANLRRKAAKAK*
Ga0116142_10000166233300009685Anaerobic Digestor SludgeMATASQVQKNLQAAMREALRIQDRFVAEPLFARTGRGYLKSEGVSTLGKIKANLRRKR*
Ga0114967_1001790533300010160Freshwater LakeMAAVSRVQKNLQAAMRDALRIQDRVIAETLFAKSIHDYFKSEGVPTLQKIKSNLRRKRAEKTK*
Ga0074044_1028860423300010343Bog Forest SoilMADPVQIQKNLRAAMKEALRIQERFVAEPVFARSGKGFLKSEGVSTMRKIKANLRRSSSTKPR*
Ga0118731_11239282813300010392MarineMATPSQAQKNLKAAMREALRIQDRFEAEPLFAKTGRGHLKSEGVSTTSKIKANLRRKTGKAK*
Ga0134127_1303573723300010399Terrestrial SoilSDRSSIAMWLARPAQALTGHSSGGKFRPMATVSQVQKNLQAAMREALRIQDRFVPEPLFAKTGHGHLKSEGVSTLSKIKANLRRKAAKPK*
Ga0134122_1087181813300010400Terrestrial SoilMATASQVQKNLRSAMREALRIQDRFVAEPLFARTGRGHLKSEGVSTLSKIKANLRRKAAKGK*
Ga0134122_1215364223300010400Terrestrial SoilMAESSKAQRNLRAATKEALRIQERFVAEPVFAKTGRGYLKSEGVSTIQKIKANLRRKSSRQGA*
Ga0134123_1265768513300010403Terrestrial SoilMATASQVKKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLSKIKANL
Ga0133913_1045212813300010885Freshwater LakeMAAVSRVQQNLQAAMRDALRIQDRVIAETLFAKSIHDYFKSEGVPTLQKIKSNLRRKRAEKTK*
Ga0137325_105188123300011415SoilMATTSQEQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLSKIKANLRRKAAKAK*
Ga0137425_106924613300011422SoilMATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLSKIKANLRRKAAKAK*
Ga0137455_118034823300011429SoilMATASQVQKNLQTAMREALRIQDRFVAEPLFAKTGRGHLKSEGVSTLSKIKANLRRKDAKAK*
Ga0137438_120599413300011431SoilMAAVSQVQKNLQAAMRDALRIQDRFVAEPLFAKTGRGHLKSEGVSTLSKIKANLRRKAAKSK*
Ga0137432_103195533300011439SoilMATASQVQKNLQAAMREALRIQDRFVAEPLFARTGRGHLKSEGVSTLSKIKANLRRKAAKAK*
Ga0137433_103176523300011440SoilMATATQVQKNLQAAMREALRIQDRFVAEPLFARTGRGHLKSEGVSTLSKIKANLRRKAAKAK*
Ga0137437_102864923300011442SoilMATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVTTLSKIKANLRRKPAKAK*
Ga0137457_120483113300011443SoilMAATSQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGHLKSEGVSTLSKIKANLRRKDAKAK*
Ga0137421_121076913300012039SoilMATASQVQKNLRAAMREALRIQDRFVAEPQFARTGRGHLKSEGVSTLGKIKANLRRK
Ga0137350_104476913300012166SoilMATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLSKIKANLRRKSA
Ga0137388_1010851023300012189Vadose Zone SoilMAGSSQVQKNLRAAMKEALRLQDRFVAEPVFGKTGQGCLKSEGVSTIQKIKTHLRKKTSRKSG*
Ga0137388_1023160923300012189Vadose Zone SoilMADMKVQRNLRAAMKEALRIQDRFVAEPLFAKTGRGYLKSEGVRTLQQIKANLRRKASLKGA*
Ga0137388_1105372323300012189Vadose Zone SoilMAGLSQVQKNLRAAMKEALRLQDRFVAEPVFGKTGQGYLKSEGVSTIQKIKTHLRKKISRKSG*
Ga0137388_1136160223300012189Vadose Zone SoilMAGSSQVQKNLRAAMKEALRLQGRFVAEPVFGKTGEGYLKSEGVSTIHKIKTHFRTKTSRKSG*
Ga0137382_1001505423300012200Vadose Zone SoilMAAASQVQKNLQAAMREALRIQDRFVAEPLFARTGRGHLKSEGVSTLSKIKSNLRRKSAKSK*
Ga0137382_1066928223300012200Vadose Zone SoilMAAASQVQKNLHAAMREALRIQDRFVAEPLFARTGRGHLKSEGVSTLKKIKANLRRKTAARSK*
Ga0137380_1140095613300012206Vadose Zone SoilMAAASQVQKNLQAAMREALRIQDRFVAEPLFARTGRGHLESEGVSTLKKIKANLRRKTAARSK*
Ga0150985_10721876923300012212Avena Fatua RhizosphereMVCSMADSFKVQRNLRAALKEALRIQDRFIAEPVFAKTGRGYLKGEGVSTIQKIKANLRRKASLKGA*
Ga0137435_112060933300012232SoilGNGKSGAKNLQAAMREALRIQNRFVAEPLFAKTGRGYLKSEGVTTLSKIKANLRRKAAKTK*
Ga0137361_1048661133300012362Vadose Zone SoilMAGLSQAQKNLRAAMKEALRLQDRFVAEPVFGKTGQGYLKSEGVSTIQKIKTHLRKKTSRKSG*
Ga0153880_147260513300012411Freshwater SedimentASQVQKNLRAGMREALRIQDRFVAEPLYAKTGRGYLKGEGVSTMSKIKANLRRKAAGEAK
Ga0150984_11024438623300012469Avena Fatua RhizosphereMADSFKVQRNLRAALKEALRIQDRFIAEPVFAKTGRGYLKSEGVSTIQKIKANLRRKASLKGA*
Ga0157309_1010549213300012895SoilMATASQAQKNLQAAMREALRIQDRFVPEPLFSKTGRGYLKSEGVSTLSKIKANLRRKAAKAK*
Ga0137394_1059765423300012922Vadose Zone SoilMAAASQVQKNLKAAMREALRIQDRFVAEPLFAKTGRGHLKSEGVSTLSKIKANLRRKAAKAK*
Ga0137394_1065682013300012922Vadose Zone SoilASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGHLKSEGVSTLSKIKANLRRKAAKLK*
Ga0137394_1146968213300012922Vadose Zone SoilMGDSAKVQRNLRAAMKEALRIQDRFVAEPVFGKTGRGYLKNEGVGTMQKIKANLRRKASQKGA*
Ga0137359_1033364623300012923Vadose Zone SoilMAGLNQIEKNLRAAVKDALRIQDRFVAEPVFAKTGRGKLKSEGVSTIQKIKANLHRRTSRKSG*
Ga0137404_1026476543300012929Vadose Zone SoilMICSMADSDKVQRNLRAAMKEALRIQDRFVAEPVFAKTGRGYLKSEGVSTIQKIKANLRRKVSRKGA*
Ga0137407_1009487333300012930Vadose Zone SoilMIYSMADSDKVQRNLRAAMKEALRIQDRFVAEPVFAKTGRGYLKSEGVSTIQKIKANLRRKVSRKGA*
Ga0137407_1193922223300012930Vadose Zone SoilQIEKDLRAAVKDALRIQDRFVAEPVFAKTGRGKLKSEGVSTIQKIKANLHQRTSRKSG*
Ga0137410_1002337923300012944Vadose Zone SoilMATASQVQKNLQAAMREALRIQDRFVAEPLFARTGRGHLKSEGVSTLSKIKANLRRKATKAK*
Ga0154020_1009827123300012956Active SludgeMATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGHLKSEGVTTLSKIKANLRRKAAKSK*
Ga0164309_1003870033300012984SoilMATANQVQKNLQAAMREALRIQDRYVAEPLFAKTGRGYLKSEGVSTLSKIKANFRRKAAKSK*
Ga0164308_1176403313300012985SoilTASQVQKNLQAAMREALRIQDCFVAEPLFAKTGRGYLKSEGVSTIGKIKANLRRKAAETK
Ga0157375_1229134713300013308Miscanthus RhizosphereMATASQVQKNLQAAMREALRIQDRFVAEPLFAKAGRGYLKSEGVSTLSKIKANLRRKAAKAK*
Ga0181521_1051037123300014158BogMAAVSQVQKNLQAAMREALRIQDRFVAEPLFARTGRGYLKGEGVSTLNKIKANLRRKAAAKSK*
Ga0181517_10000278523300014160BogMAATSQVQKNLRAAMREALRLQDRFVAEPLFARTGRGYLKGEGVSTLSKIKANLRRKAAVKSK*
Ga0134079_1016780613300014166Grasslands SoilMADSVKVQRNLRAAMKEALRIQDRFVADPVFAKIGRGYLKSEGVSTVQKIKAHLRRKASLKGA*
Ga0181528_1000232533300014167BogMKLHGIDRMPVQHYFFCMASMSQIQKNLRAAMKDALRIQDRFVAEPVFAKTGRGYLKREGVATMHKIKASVRHRSAAGAR*
Ga0181535_1001680163300014199BogMATTSQVQKNLRNAMKEALRIQDRFVAEPLFAKTGQGYLKSEGTATVQKIKASLRRHNSAKLK
Ga0181537_1041881323300014201BogMAAATKVQKNLQAAMREALQIQERFVAEPLFARTGRGYLKSEGVSTLRRIKSNLRRRPSKSK*
Ga0157380_1144661723300014326Switchgrass RhizosphereMATASQVQKNLQAAMREALRIQDRSVAEPLFAKTGRGYLKSEGVSTLSKIKANLRRKAAKAK*
Ga0182018_10000632433300014489PalsaMAAVTQVQKNLQSAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLHNIKSNLRRPAKTK*
Ga0182010_1033665523300014490FenMAAASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKGEGVSTLSKIKANLRRKAAAKSK*
Ga0182014_1004970153300014491BogMAAVSQVQKNLQAAMREALRIQDRFVAEPLYAKTGRGYLIGAGVSTLNKIKANLRRKAASKSK*
Ga0182013_1064526613300014492BogMAATSQIQKNLEAAMREALRIQDRFVAEPLFAKTGRGYLIGAGVSTLNKIKANLRRKAASKSK*
Ga0182016_10000083433300014493BogMAAATQVQKNLQAAMREALRIQVRFVAEPLFAKTGRVYLKSEGVSTLQNIESNLRRRPTKSESI*
Ga0182016_1001178213300014493BogMAGSVQAQKNLRAAMSEALRIQGRFVAEPVFAKTGQGYLKSEGVRTMHKIKANLRRRTSSKP
Ga0182017_1079666613300014494FenAVSQVQKNFQAAAMRDVLRIEDRLVAEPRFARTGRGYLPGEGVSIFPLNQIKAKVRRQAAAKSK*
Ga0182015_1083985823300014495PalsaMADPVQVQKNLRAAMKEALRIQDRFVAEPILARTGRGYLKSEGVSTIHKIKANLRRRTSVKPA*
Ga0182012_1000009173300014499BogMAAATQVQKNLQAAMREALRIQVRFVAEPLFAKTGRGYLKSEGVSTLQNIESNLRRRPTKSESI*
Ga0182012_1000561663300014499BogMTTKAQENLQAAMREALRIQDRFVAEPLFATTGRGHLKSEGVDTLQQIKSNLTRNIAAAHLALRAVA*
Ga0182012_1038762423300014499BogMAAATRVEKNLRAAMRDALRIQNRFVREPLFAKTGRGHLKSEGVSSMQKIKSSPASKRS*
Ga0182024_1045314843300014501PermafrostMSQIQKNLREAMKDALRIQGRFVPEPVFAKTGRGYLKSEGVTTLHKIKAGVRPRSSARAK
Ga0182021_1022104413300014502FenRESLCRGVDRARFWRLPFCMAAVSQVQKNLHAAMREALRIQDRFVAEPLFAKTGRGYLKGEGVSTLNKIKANLRRKTAAKSK*
Ga0181516_1023294133300014655BogQSQRNLRDAMKEALRIQERFVAEPVFAKTGQGYLKSEGVSTIHKIKSNLRRRAARKSE*
Ga0182030_1005897613300014838BogMRIQHYCLGMASVSQIQANLRAAMKDALRIQDRFVPEPVFAKTGRGHLKSEGVSTLHKIKAGVRHRSSAKAR*
Ga0182030_1051341533300014838BogMPTATQAEKNLRAAMRDALRIQDRFVPEPLFAKTGQGYLKSEGVSTLRKIKSNFRRKSPAKGK*
Ga0182027_1087249123300014839FenMAAATQVQKNLQAAMREALRLQDRFVAEPLFAKTGRGYLKSEGVTTLKRIKANLRRHAARS*
Ga0137409_1129276523300015245Vadose Zone SoilMAAASQVQKNLQAAMRDALRIQDRFVAEPLFARTGRGYLKSEGVSTLSKIKSSLRRKSSAKAK*
Ga0137403_1036826533300015264Vadose Zone SoilMAGLNQIEKNLRAAVKDALRIQDRFVAEPVFAKTGRGKLKSEGVSTIQKIKANLHQRTSRKSG*
Ga0187848_1024518923300017935PeatlandMADSVQIQKNLRAAMKEALRIQDRFVAEPVFARTGRGHLKSEGVRTIQKIKANLRRTTSSKPG
Ga0187780_1039008423300017973Tropical PeatlandMAAATQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEAVSTMGRIKANLRRKANKTK
Ga0181520_1002847023300017988BogMAATSQVQKNLRAAMREALRLQDRFVAEPLFARTGRGYLKGEGVSTLSKIKANLRRKAAVKSK
Ga0187884_1046587513300018009PeatlandATQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLQRITSNLRRRPAKSK
Ga0187873_123548613300018013PeatlandKFWRQPLCMAATSQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKGEGVSTLNKIKANLRRKAAPKSK
Ga0187889_1015033623300018023PeatlandMATGSRVRKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKGEGVSTLNKIKANLRRKAAAKSK
Ga0187881_1041342313300018024PeatlandKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKGEGVSTLNKIKANLRRKTAAKSK
Ga0187875_1036215213300018035PeatlandIFSLMADSVQVQKNLRAAMKEALRIQDRFVAEPVFAKTGRGCLKSEGVSTIHKIKANLRRSTSPKPG
Ga0187890_1051392413300018044PeatlandMADSVQVQKNLRAAMKEALRIQDRFVAEPVFAKTGRGCLKSEGVSTIHKIKANLRRRTSPKPG
Ga0187851_1087543313300018046PeatlandMAVVSHVQKNLQAAMREALCIQDRFVPEPLFAKTGRGYLKGEGVATLNKIKSNLRRKAATKSK
Ga0184618_1047431413300018071Groundwater SedimentMAAASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGHLKSEGVSTLNKIKSNLKKA
Ga0184628_1021843733300018083Groundwater SedimentSQAQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLSKIKANLRRKAAKAK
Ga0184628_1059531513300018083Groundwater SedimentMAAASQVQKNLQAAMREGLRIQDRFVAEPLFARTGRGYLKSEGVSRLSKIKAKLHSKTAARAK
Ga0190271_1064652823300018481SoilMLTGRDSGGNFGAWPTASQAQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLDKIKANLRRKAARAK
Ga0190271_1132764523300018481SoilMATASQAQKNLQAAMREALRIQDRFVAEPLFSKTGRGHLKSEGVSTLSKIKANLRRKAAKAK
Ga0181501_124768913300019230PeatlandQVQKNLRAAMREALRLQDRFVAEPLFARTGRGYLKGEGVSTLSKIKANLRRKAAVKSK
Ga0194132_1055252123300020214Freshwater LakeMATVTQAEKNLRAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTISKIKAGLRRKSAKTQ
Ga0193719_1035530913300021344SoilMAAASQVQKNLQAAMREALRIQDRFVAEPLFARTGRGHLKSEGVSTLKKIKANLRRKTAARSK
Ga0194048_1012998623300021519Anoxic Zone FreshwaterMAAVSRVQKNLQAAMRDALRIQDRVIAETLFAKSIHDYFKSEGVPTLQKIKSNLRRKRAEKTK
Ga0224557_113778723300023101SoilMAATSQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKGEGVSTLNKIKANLRRKTAAKSK
(restricted) Ga0233425_1001685093300024054FreshwaterMAAAKQVQKNLHAAMREALRLQDRFVAEPLFAKTGRGHLKSEGVSTLARIKANLRRKAAKAK
Ga0124853_151102523300024056Freshwater WetlandsMTQVEKNLRAAMKEALRIQDRFVAEPVFAKTGQGYLKSEGVSTIHKIKANLRKRASRKPA
Ga0209200_100094543300025784Anaerobic Digestor SludgeMATASQVQKNLQAAMREALRIQDRFVAEPLFARTGRGYLKSEGVSTLGKIKANLRRKR
Ga0207663_1168953423300025916Corn, Switchgrass And Miscanthus RhizosphereGIIYSMADSKVQRNLRAAMKEALRIQDRFVAEPLFAKTGRGYLKSDGVSSLQKIKANLRRKAALKGA
Ga0207677_1182844323300026023Miscanthus RhizosphereMATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGHLKSGGVSTLSKIKANLRRKTAKGK
Ga0209388_106593113300027655Vadose Zone SoilNVGWMAGLSQVQKNLRAAMKEALRLQDRFVAEPVFGKTGQGYLKSEGVSTIQKIKTHLRKKASRKSG
Ga0209514_1008405623300027819GroundwaterMADSTQIQRNLRAAMKEALRIQDRFVAEPVFAKTGRGYVKSEGVSPIHRIKANQHRSTTAKPA
Ga0209491_10000358493300027832FreshwaterMATASQVQKNLKAAMREALRIQDRFEAEPLFAKTGRGHLKSEGVSTISKIKANLRRKTDKAK
Ga0209067_1002242013300027898WatershedsMAAATQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVGALERIKTNLRRRPVNSK
Ga0209006_1028677243300027908Forest SoilMAVATQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLQSIKSNLRRHPAKTK
Ga0302269_113467223300028766BogMAAATQVQKNLQAAMREALRIQVRFVAEPLFAKTGRGYLKSEGVSTLQNIESNLRRRPTKSESI
Ga0268298_1019262633300028804Activated SludgeMATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLGKIKANLRRKAAKAK
Ga0311361_1003449163300029911BogMATLSQIQKNLRAAMKDALRIQDRFLPEPIFAKTGRGYLKSEGTATARKIRANIQHRPRNKAG
Ga0311359_1114417013300029914BogMPAATQIEKNLRAAMRDALRIQDRFVPEPLFAKTGQGYLKSEGVSTTQKIKSNLRRKSPA
Ga0311358_1010025343300029915BogMTTKAQENLQAAMREALRIQDRFVAEPLFATTGRGHLKSEGVDTLQQIKSNLTRNIAAAHLALRAVA
Ga0311358_1075591013300029915BogRAAMKDALRIQDRFLPEPIFAKTGRGYLKSEGTATARKIRANIQHRPRNKAG
Ga0311363_1011001533300029922FenMTTKAQENLPAAMREALRIQDRFVAEPLFATIGRGHLKSEGVDTLQQIKSNLTRNIAAAHLALRAVA
Ga0311363_1056318823300029922FenMPVATQVEKNLRAAMRDALRIQDRFVPEPLFAKTGQGYLKSEGVSTTQKIKSNL
Ga0302281_1007977523300030044FenMATLSQIQKNLRAAMKDALRIQERFVPEPIFAKTGHGYLKSEGTATVRKIKANIRRRRSEKA
Ga0302281_1013347523300030044FenMPAAKQVKTVEKNLRAAMCDALRIQDRFVSESLFARTGEGCLKSEGVSALQKIKSNLRRKVPAKAK
Ga0302046_1118620823300030620SoilMAATSQVQKNLQAAMREALRIQDRFTAKPLFTKTGRGHLKSEGVSTLEKIKSNLRRKPAGKGKRNGAGF
Ga0138296_131285223300030923SoilMADPAQVQKILRAAMKEALRIQDRFVAEPVFAKTGRGYLKSEGVSTIRKIKANLRRNASAKARS
Ga0170834_10736208843300031057Forest SoilSNMKLHGIDRKAVQHYCLGMASVSQVQKNLRAAMKDALRIQDRFVAEPVFAKTGRGYLKSEGVSTLHKIKASVRHRSAAAGR
Ga0170823_1417044513300031128Forest SoilQMALQDYRLGMASVSQIQKNLRAAMKDALRIQDRFVPEPVFAKTGRGHLKSECVSTLHKIKASIRHRSSGT
Ga0302323_10063058523300031232FenMATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGHLKSEGVSTLSKIKANLRRKAATKSK
Ga0302323_10153173633300031232FenMPAATQAEKNLRAAMREALRIQDRFVPEPLFARTGQGYLRSEGVSTLEKIKSNLRRKSPAKGK
Ga0302324_10018485043300031236PalsaMMADSVQIQKNLRAAMKEALRIQDRFVAEPVFAKTGRGYLKSEGVSTIHKIKANLRRSSSPKSE
Ga0302324_10099978913300031236PalsaMADSVQVQKNLRAAMKEALRIQDRFVAEPVFAKTGRGCLKSEGVSTIHKIKANLRRSTSPKSIRFRP
Ga0265327_1014381423300031251RhizosphereMASVSQIQANLRAAMKDALRIQDRFVPEPVFAKTGRGQLKSEGVTTLHKIKAGVRHRSSAKAR
Ga0302320_1012877083300031524BogMPVATQVEKNLRAAMRDALRIQDRFVPEPLFAKTGQGYLKSEGVSTTQKIKS
Ga0302326_1306256813300031525PalsaQVQRNLRAAMKEALRIQDRFVAEPVFAKTGRGYLKSEGVSAIGKIKANLRRSNSSKPG
Ga0310686_10536539313300031708SoilVATLNQAQKNLRNAMKEALRIQDRFVAEPLFAKTGRGHLKSEGVSTLQNIKANIRRIKRG
Ga0302321_10060467523300031726FenMATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGHLKSEGVSTLSKIKANLRRKAAKAK
Ga0316219_122542923300031759FreshwaterRWRAILSWMADSVQIQKNLRAAMKEALRIQDRFVAEPVFARTGRGCLKSEGVSTIHKIKANLRRSASKPG
Ga0302319_1041745113300031788BogMPVATQVEKNLRAAMRDALRIQDRFVPEPLFAKTGQGYLKSEGVSTTQKIKSNLRRKSPAKAK
Ga0315272_1028515823300032018SedimentMADSAQVQRNLRAAMKEALRIQDRFVAEPVFAKTGRGYLKSDGVGTIHKIKSNLRRSTSHKPG
Ga0315292_1034734323300032143SedimentLCVAAISQVQKNLQAAMREALRIQARFAAEPLFAKTGRGYLEGEGVATLSKIKSNLRRKVAAKFE
Ga0315910_1002797623300032144SoilMATASQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGHLKSEGVSTLSKIKANLRRKAGKTK
Ga0315295_1145802523300032156SedimentMAVASQVQKNLQAAMREALRMQDRFVAEPLFAKTGRGYLKGEGIATLSKIKANLSRKTAARSK
Ga0315268_1250793113300032173SedimentMAAANQVQKNLQAAMREALRIQDRFVGEPLFAKTGRGYLKSEGVSTLNKIKANLRRKPAARSK
Ga0315276_1137177523300032177SedimentMAAMSQVQKNLQAAMREALRIQDRFVAEPLFASTGRGYLKSEGVSTLSKIKANLRRKSAGRSK
Ga0315271_1061713823300032256SedimentMAAVSQVQENLQAAMREALRIQDRFVAEPLFAKTGRGYLKGEGVSTLNKIKVNLRRKAAAKSK
Ga0315271_1144733923300032256SedimentPIPMATATQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTLSQIKSNLRRKVAKSK
Ga0315287_1013092923300032397SedimentMADSAQIQRNLRAAMKEALRIQDRFVAEPIFAKTGRGYLKSGGVSTIHRIKANLRRSASRKPA
Ga0348332_1166514323300032515Plant LitterKVEKNLRAAMRDALRIQDRFVPEPLFAKTGRGYLKSEGVSMLQKIKSNLARKSAAKGR
Ga0315273_1124907323300032516SedimentMADSAQIQRNLRAAMKEALRIQDRFVAEPVFAKTGRGHLKSEGVSTIRRIKANLRRSASRKPA
Ga0316226_1003208103300032562FreshwaterMADSVQIQKNLRAAMKEALRIQDRFVAEPVFARTGRGCLKSEGVSTIHKIKANLRRSASKPG
Ga0316230_108539623300032668FreshwaterMAATTRVQKSLQAAMHEALRIQDRFVAEPLFAKTGRGHLKSEGAATIRHIKSSLIRYYRWFLR
Ga0335085_1137240923300032770SoilMATATQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVTTISRIKTNLRRKAAKAK
Ga0335081_1039994723300032892SoilMAAVSQVQKNLQAALRIQDRFVAEPLFAKTGRGYLKGEGVSTLNKIKANLRRKGVAKSKRQARMNLAKR
Ga0335069_1153160023300032893SoilMATATQVQKNLQAAMREALRIQDRFVAEPLFAKTGRGYLKSEGVSTISKIKANLRRKAAKAK
Ga0335071_1179633913300032897SoilMAAISQVQKNLQAAMREALRIQDRFVPEPLFARTGRGHLKSEGVSTLSKIKANLRRKTAGKSK
Ga0326728_1011753153300033402Peat SoilMPAVTQVEKNLRAAMRDALRIQDRFLPEPLFAKTGQGYLKSEGVSTLQKINSNLRRKSPAKAK
Ga0326728_1063313213300033402Peat SoilMAAVSQVQKNLQAAMREALRLQDRFVPEPLFARTGRGYLKSEGVSTLSKIKTNLRRKASSRSR
Ga0371489_0004303_2520_27113300033755Peat SoilMAAASQVQKNLQAAMREALRIQDRFVAEPLFARTGRGYLKGEGVSTLNKIKTNLRRKAAAKSK
Ga0334837_006038_35_2263300033823SoilMAATSQIQKNLEAAMREALRIQDRFIAGPLFAKTGRGYLKREGVSTLNKIKVNLCRKAAAGAS
Ga0370495_0225988_26_2143300034257Untreated Peat SoilMAAASQVQKNLQAAMREALRIQDRFVAEPLFARTGRGHLKSEGVSTLSKIKSNLRRKAAKPK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.