NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F026846

Metagenome / Metatranscriptome Family F026846

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F026846
Family Type Metagenome / Metatranscriptome
Number of Sequences 196
Average Sequence Length 48 residues
Representative Sequence MRDLLAALAELRERLKEIPQADERRLQDLKTEILGRKAGALTKILGR
Number of Associated Samples 159
Number of Associated Scaffolds 196

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 92.35 %
% of genes near scaffold ends (potentially truncated) 99.49 %
% of genes from short scaffolds (< 2000 bps) 90.31 %
Associated GOLD sequencing projects 153
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.959 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil
(33.674 % of family members)
Environment Ontology (ENVO) Unclassified
(58.673 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(66.327 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.00%    β-sheet: 0.00%    Coil/Unstructured: 48.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 196 Family Scaffolds
PF00453Ribosomal_L20 51.53
PF01632Ribosomal_L35p 20.41
PF05198IF3_N 12.76
PF00707IF3_C 10.71
PF00753Lactamase_B 2.04
PF02274ADI 1.02
PF00929RNase_T 0.51
PF02912Phe_tRNA-synt_N 0.51
PF13185GAF_2 0.51

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 196 Family Scaffolds
COG0292Ribosomal protein L20Translation, ribosomal structure and biogenesis [J] 51.53
COG0290Translation initiation factor IF-3Translation, ribosomal structure and biogenesis [J] 23.47
COG0291Ribosomal protein L35Translation, ribosomal structure and biogenesis [J] 20.41
COG1834N-Dimethylarginine dimethylaminohydrolaseAmino acid transport and metabolism [E] 1.02
COG2235Arginine deiminaseAmino acid transport and metabolism [E] 1.02
COG4874Uncharacterized conserved proteinFunction unknown [S] 1.02
COG0016Phenylalanyl-tRNA synthetase alpha subunitTranslation, ribosomal structure and biogenesis [J] 0.51


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.96 %
UnclassifiedrootN/A2.04 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001661|JGI12053J15887_10115905All Organisms → cellular organisms → Bacteria1437Open in IMG/M
3300002561|JGI25384J37096_10019478All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca2642Open in IMG/M
3300002561|JGI25384J37096_10131388All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300002562|JGI25382J37095_10065885All Organisms → cellular organisms → Bacteria1361Open in IMG/M
3300002562|JGI25382J37095_10182621All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium645Open in IMG/M
3300003993|Ga0055468_10116781All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300003995|Ga0055438_10002107All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae3372Open in IMG/M
3300005174|Ga0066680_10749663All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium593Open in IMG/M
3300005176|Ga0066679_10596617All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300005178|Ga0066688_10839563All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium571Open in IMG/M
3300005186|Ga0066676_10241507All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300005446|Ga0066686_10130602All Organisms → cellular organisms → Bacteria1646Open in IMG/M
3300005446|Ga0066686_10214146All Organisms → cellular organisms → Bacteria1293Open in IMG/M
3300005446|Ga0066686_10656950All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300005447|Ga0066689_10106599All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1615Open in IMG/M
3300005526|Ga0073909_10299011All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300005545|Ga0070695_100035587All Organisms → cellular organisms → Bacteria3128Open in IMG/M
3300005546|Ga0070696_101276059All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300005554|Ga0066661_10058086All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2231Open in IMG/M
3300005554|Ga0066661_10126706All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1548Open in IMG/M
3300005554|Ga0066661_10892686All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium520Open in IMG/M
3300005555|Ga0066692_10825520All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium569Open in IMG/M
3300005557|Ga0066704_10746622All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium612Open in IMG/M
3300005568|Ga0066703_10788991All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium543Open in IMG/M
3300005575|Ga0066702_10366485All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300005576|Ga0066708_10047539All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2389Open in IMG/M
3300005586|Ga0066691_10942860All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium507Open in IMG/M
3300005879|Ga0075295_1031301All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300006755|Ga0079222_10820637All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300006791|Ga0066653_10146418All Organisms → cellular organisms → Bacteria1143Open in IMG/M
3300006791|Ga0066653_10702806All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium523Open in IMG/M
3300006794|Ga0066658_10875628All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium514Open in IMG/M
3300006844|Ga0075428_100708033All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300006845|Ga0075421_101055969All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300006847|Ga0075431_102246942All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300006852|Ga0075433_10547301All Organisms → cellular organisms → Bacteria1018Open in IMG/M
3300006871|Ga0075434_100316051All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1582Open in IMG/M
3300006904|Ga0075424_102580852All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium531Open in IMG/M
3300006914|Ga0075436_100592009All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300006954|Ga0079219_11348385All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300006969|Ga0075419_10845537All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300007265|Ga0099794_10168218All Organisms → cellular organisms → Bacteria1117Open in IMG/M
3300009012|Ga0066710_102219448All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300009012|Ga0066710_102349491All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300009012|Ga0066710_103050941All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300009012|Ga0066710_103498068All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium594Open in IMG/M
3300009012|Ga0066710_104577716All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium517Open in IMG/M
3300009012|Ga0066710_104786278All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium506Open in IMG/M
3300009089|Ga0099828_10118242All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2313Open in IMG/M
3300009089|Ga0099828_11906939All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium521Open in IMG/M
3300009802|Ga0105073_1002447All Organisms → cellular organisms → Bacteria1293Open in IMG/M
3300009814|Ga0105082_1070325All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium620Open in IMG/M
3300010046|Ga0126384_11055409All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300010047|Ga0126382_12236432All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium527Open in IMG/M
3300010084|Ga0127461_1082718All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300010086|Ga0127496_1100977All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium611Open in IMG/M
3300010087|Ga0127492_1050250All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium570Open in IMG/M
3300010093|Ga0127490_1045254All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1357Open in IMG/M
3300010107|Ga0127494_1080801All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300010107|Ga0127494_1146194All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300010108|Ga0127474_1017491All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium584Open in IMG/M
3300010109|Ga0127497_1141519All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium522Open in IMG/M
3300010114|Ga0127460_1118723All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300010115|Ga0127495_1031568All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300010115|Ga0127495_1093951All Organisms → cellular organisms → Bacteria1055Open in IMG/M
3300010116|Ga0127466_1017776All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1398Open in IMG/M
3300010118|Ga0127465_1048857All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium696Open in IMG/M
3300010118|Ga0127465_1091308All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300010119|Ga0127452_1091011All Organisms → cellular organisms → Bacteria1504Open in IMG/M
3300010126|Ga0127482_1168319All Organisms → cellular organisms → Bacteria1460Open in IMG/M
3300010127|Ga0127489_1104856All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium933Open in IMG/M
3300010127|Ga0127489_1122463All Organisms → cellular organisms → Bacteria966Open in IMG/M
3300010128|Ga0127486_1148736All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium748Open in IMG/M
3300010130|Ga0127493_1110336All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1112Open in IMG/M
3300010132|Ga0127455_1089889All Organisms → cellular organisms → Bacteria1424Open in IMG/M
3300010134|Ga0127484_1148040All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium548Open in IMG/M
3300010140|Ga0127456_1075718All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium500Open in IMG/M
3300010140|Ga0127456_1109277All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300010141|Ga0127499_1108951All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium866Open in IMG/M
3300010304|Ga0134088_10295535All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300010304|Ga0134088_10509431All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium593Open in IMG/M
3300010321|Ga0134067_10191145All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300010323|Ga0134086_10383046All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium562Open in IMG/M
3300010325|Ga0134064_10036229All Organisms → cellular organisms → Bacteria1467Open in IMG/M
3300010329|Ga0134111_10046039All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1572Open in IMG/M
3300010333|Ga0134080_10023961All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2284Open in IMG/M
3300010335|Ga0134063_10344699All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300010336|Ga0134071_10031281All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2325Open in IMG/M
3300010362|Ga0126377_11642694All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300010362|Ga0126377_11814990All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300010366|Ga0126379_11705928All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300010905|Ga0138112_1132901All Organisms → cellular organisms → Bacteria1452Open in IMG/M
3300011427|Ga0137448_1082035All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium855Open in IMG/M
3300011437|Ga0137429_1005284All Organisms → cellular organisms → Bacteria3832Open in IMG/M
3300011438|Ga0137451_1014657All Organisms → cellular organisms → Bacteria2261Open in IMG/M
3300011443|Ga0137457_1129099All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300012129|Ga0137345_1047363Not Available554Open in IMG/M
3300012163|Ga0137355_1019467All Organisms → cellular organisms → Bacteria1220Open in IMG/M
3300012200|Ga0137382_10554594All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium819Open in IMG/M
3300012205|Ga0137362_10471162All Organisms → cellular organisms → Bacteria1087Open in IMG/M
3300012208|Ga0137376_10595958All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300012208|Ga0137376_11542757All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium555Open in IMG/M
3300012212|Ga0150985_114156212All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300012351|Ga0137386_10113460All Organisms → cellular organisms → Bacteria1925Open in IMG/M
3300012356|Ga0137371_10093273All Organisms → cellular organisms → Bacteria2341Open in IMG/M
3300012358|Ga0137368_10394954All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300012373|Ga0134042_1036020All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300012373|Ga0134042_1065372All Organisms → cellular organisms → Bacteria1380Open in IMG/M
3300012379|Ga0134058_1071190All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300012381|Ga0134026_1181215All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium595Open in IMG/M
3300012386|Ga0134046_1002872All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300012386|Ga0134046_1097757All Organisms → cellular organisms → Bacteria1153Open in IMG/M
3300012386|Ga0134046_1140182All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300012390|Ga0134054_1051582All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300012390|Ga0134054_1088055All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium504Open in IMG/M
3300012390|Ga0134054_1111832All Organisms → cellular organisms → Bacteria1398Open in IMG/M
3300012390|Ga0134054_1236303All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300012392|Ga0134043_1291286All Organisms → cellular organisms → Bacteria1466Open in IMG/M
3300012395|Ga0134044_1025038All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium524Open in IMG/M
3300012396|Ga0134057_1162054All Organisms → cellular organisms → Bacteria1024Open in IMG/M
3300012397|Ga0134056_1114165All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300012397|Ga0134056_1150975All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300012397|Ga0134056_1244626All Organisms → cellular organisms → Bacteria1391Open in IMG/M
3300012398|Ga0134051_1332554All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300012401|Ga0134055_1255350All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300012401|Ga0134055_1348187Not Available516Open in IMG/M
3300012402|Ga0134059_1154676All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium546Open in IMG/M
3300012403|Ga0134049_1084382All Organisms → cellular organisms → Bacteria1431Open in IMG/M
3300012404|Ga0134024_1203991All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300012406|Ga0134053_1216480All Organisms → cellular organisms → Bacteria1412Open in IMG/M
3300012407|Ga0134050_1059015All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300012409|Ga0134045_1133075All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300012410|Ga0134060_1352881All Organisms → cellular organisms → Bacteria1109Open in IMG/M
3300014157|Ga0134078_10204898All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium806Open in IMG/M
3300015054|Ga0137420_1317284All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas2133Open in IMG/M
3300015054|Ga0137420_1429440All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1791Open in IMG/M
3300015359|Ga0134085_10029064All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2146Open in IMG/M
3300017654|Ga0134069_1135985All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium816Open in IMG/M
3300017657|Ga0134074_1131438All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300018053|Ga0184626_10319147All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300018084|Ga0184629_10363777All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300018089|Ga0187774_10660507All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300018482|Ga0066669_10124326All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1845Open in IMG/M
3300018482|Ga0066669_11255768All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300019238|Ga0180112_1288213All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium521Open in IMG/M
3300019878|Ga0193715_1007154All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2382Open in IMG/M
3300020170|Ga0179594_10418952All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium508Open in IMG/M
3300021086|Ga0179596_10314683All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300022204|Ga0224496_10404109All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium551Open in IMG/M
3300022226|Ga0224512_10319558All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300024178|Ga0247694_1039606All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium531Open in IMG/M
3300024219|Ga0247665_1013994All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300025159|Ga0209619_10137535All Organisms → cellular organisms → Bacteria1423Open in IMG/M
3300025167|Ga0209642_10676580All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium554Open in IMG/M
3300025318|Ga0209519_10194656All Organisms → cellular organisms → Bacteria1195Open in IMG/M
3300025319|Ga0209520_10363661All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300025322|Ga0209641_10087288All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2392Open in IMG/M
3300025910|Ga0207684_10491548All Organisms → cellular organisms → Bacteria1052Open in IMG/M
3300025910|Ga0207684_10963548All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300025957|Ga0210089_1056154Not Available510Open in IMG/M
3300026025|Ga0208778_1012145All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300026075|Ga0207708_11184431All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300026297|Ga0209237_1046100All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2231Open in IMG/M
3300026300|Ga0209027_1162955All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300026301|Ga0209238_1009221All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae3894Open in IMG/M
3300026308|Ga0209265_1072215All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300026309|Ga0209055_1143180All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300026318|Ga0209471_1201914All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300026318|Ga0209471_1213350All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300026326|Ga0209801_1319156All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium549Open in IMG/M
3300026334|Ga0209377_1111853All Organisms → cellular organisms → Bacteria1113Open in IMG/M
3300026334|Ga0209377_1126990All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300026334|Ga0209377_1198705All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300026342|Ga0209057_1129986All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300026494|Ga0257159_1053473All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300026530|Ga0209807_1161843All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300026547|Ga0209156_10318704All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300026548|Ga0209161_10211678All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300026551|Ga0209648_10716568All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium546Open in IMG/M
3300026552|Ga0209577_10106311All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2266Open in IMG/M
3300027511|Ga0209843_1091883Not Available514Open in IMG/M
3300027643|Ga0209076_1129839All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300027671|Ga0209588_1185906All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium651Open in IMG/M
3300027765|Ga0209073_10078772All Organisms → cellular organisms → Bacteria1132Open in IMG/M
3300027775|Ga0209177_10022943All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1562Open in IMG/M
3300027846|Ga0209180_10305672All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300027873|Ga0209814_10115743All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1142Open in IMG/M
3300027882|Ga0209590_10456014All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium826Open in IMG/M
3300027882|Ga0209590_10617937All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300027909|Ga0209382_12278349All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium510Open in IMG/M
3300032205|Ga0307472_101969708All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium584Open in IMG/M
3300033432|Ga0326729_1058431All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium591Open in IMG/M
3300033815|Ga0364946_007335All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1903Open in IMG/M
3300034090|Ga0326723_0000642All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae13154Open in IMG/M
3300034176|Ga0364931_0233758All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium603Open in IMG/M
3300034643|Ga0370545_057432All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium771Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil33.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil16.84%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil8.16%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.10%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil3.06%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.55%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.55%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.04%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.53%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.53%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment1.02%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.02%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.02%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.02%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.02%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.02%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.02%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.51%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.51%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.51%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.51%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.51%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.51%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005879Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009802Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60EnvironmentalOpen in IMG/M
3300009814Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010084Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010086Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010087Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010093Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010107Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010108Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010109Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010114Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010115Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010116Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010118Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010119Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010126Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010127Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010128Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010130Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010132Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010134Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010140Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010141Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010905Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011427Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2EnvironmentalOpen in IMG/M
3300011437Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2EnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300011443Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2EnvironmentalOpen in IMG/M
3300012129Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT530_2EnvironmentalOpen in IMG/M
3300012163Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT800_2EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012373Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012379Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012381Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012386Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012390Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012395Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012397Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012401Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012402Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012404Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012406Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012409Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012410Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019238Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022204Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_8_1EnvironmentalOpen in IMG/M
3300022226Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13EnvironmentalOpen in IMG/M
3300024178Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35EnvironmentalOpen in IMG/M
3300024219Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06EnvironmentalOpen in IMG/M
3300025159Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3EnvironmentalOpen in IMG/M
3300025167Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025318Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1EnvironmentalOpen in IMG/M
3300025319Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1EnvironmentalOpen in IMG/M
3300025322Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025957Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026025Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026494Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-AEnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027511Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033432Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fractionEnvironmentalOpen in IMG/M
3300033815Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M
3300034643Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1011590543300001661Forest SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAGALTQILGRLPKLDPS
JGI25384J37096_1001947863300002561Grasslands SoilMRDLLAAIAQLRERLEEIPQADERRLPDLKTEILGRKAGALTTILARVPRLDAASKKQ
JGI25384J37096_1013138843300002561Grasslands SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAGAL
JGI25382J37095_1006588513300002562Grasslands SoilMSDLLAALNSLRERLKEIPHADERRLQELKIELLGRKAGALTEILKAL
JGI25382J37095_1018262113300002562Grasslands SoilMRDLLAAIAQLRERLEEIPQADERRLPDLKTEILGRKAGALTTILARVPRLDA
Ga0055468_1011678133300003993Natural And Restored WetlandsMSDLRAALASLRERLKEIPQADHRRLQELKTELVGRKAGALTEILK
Ga0055438_1000210713300003995Natural And Restored WetlandsMSDLLASLDGLRGRLRDIAQADAPRLQELRTELLGRKAGALTQVLKGLP
Ga0066680_1074966313300005174SoilMRDLLAAIAQLRERLEEIPQADERRLPDLKTEILGRKAGALTTILARVPRLDAASKKQVGAAAN
Ga0066679_1059661733300005176SoilMSDLLAALNALRERLTEVPQADARRLQELKTEILGRKAGALTHILAA
Ga0066688_1083956313300005178SoilMRDLLAALTELRERLQEIPQADERRLQDLKTEILGRKAGA
Ga0066676_1024150743300005186SoilMRDLLAALGELRERLKEIPQADERRLQDLKTEILGRKAGTLTQILGALPRLDPASKKEV
Ga0066686_1013060243300005446SoilMRDLLAAIDALRERLQEIPQADDRRLQDLKIEILGRKAGALTKILAAVPK
Ga0066686_1021414613300005446SoilMSDLLAALNSLRERLNEIPHADERRLQELKIELLGRKAGAL
Ga0066686_1065695013300005446SoilMADLLAALNALRERLSEIPQADERRLQDLKTEILGRKAGA
Ga0066689_1010659913300005447SoilMRDLLAALTELRERLQEIPQADERRLQDLKTEILGRKAGALTQI
Ga0073909_1029901133300005526Surface SoilMSDLLAALDSLRERLNEIPQADERRLQELKTELLGRKAGALTDIL
Ga0070695_10003558773300005545Corn, Switchgrass And Miscanthus RhizosphereMRDLLAALAELRERLKEIPQADERRLPDLKTEILGRKAGALT
Ga0070696_10127605933300005546Corn, Switchgrass And Miscanthus RhizosphereMRDLLARLDGLRERLREVPQADERRLQDLRTEILGRKNGALTD
Ga0066661_1005808653300005554SoilMRDLLAALAALRERLPEIPQADARRLPDLKTEILGRKNGALTEIL
Ga0066661_1012670613300005554SoilMSDLLAALNALRERLKDIPQADERRLQELKTELLGRKAGALTEILKA
Ga0066661_1089268613300005554SoilMRDLLAALSELRERLKEIPRADERRLQDLKTEVLGRKAGALTELLTTLPQLEPA
Ga0066692_1082552013300005555SoilMRDLLAAIDALRERLQEVPQADDRRLQDLKTEVLGRKGGALTKILAAVPKLAPAER
Ga0066704_1074662213300005557SoilMRDLLAAIDALRERLQEIPQADDRRLQDLKTEILGRKGGALTKILAAVPKLAPAERKA
Ga0066703_1078899113300005568SoilMRDLLAAIDALRERLQEVPQADDRRLQDLKTEVLG
Ga0066702_1036648513300005575SoilMSDLLAALNALRERLKEIPQADERRLQELKTELLGRKAGALTEILKALPSLDPE
Ga0066708_1004753913300005576SoilMRDLLAALTELRERLPEIPQADERRLPELKTEILGRKAGALTKILAALPRLE
Ga0066691_1094286023300005586SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEMLGRKAGALTQILGRL
Ga0075295_103130113300005879Rice Paddy SoilMRDLLARLDGLRERLREIPQADERRLQDLRNEILGRKNGALT
Ga0079222_1082063733300006755Agricultural SoilMRDLLAAIAQLRERLEEIPQADERRLPELKTEILGRKAGALITILARLPKLAPASRKE
Ga0066653_1014641843300006791SoilMRDLLAAIDALRERIQEVPQADDRRLQDLKTEILGRKGGALTKILAAVPKL
Ga0066653_1070280623300006791SoilMRDLLAALGELRERLKEIPQADERRLQDLKTEILGRKAGTLTQILGALPRL
Ga0066658_1087562813300006794SoilMRLDDLRERLKEIPQADERQLHEIKTELLGRRAGALTEVLKTLPSMAPE
Ga0075428_10070803313300006844Populus RhizosphereMSDLLAGLEGLRERLQEIPQADERRLQELKTELLGRKAGALTDIL
Ga0075421_10105596943300006845Populus RhizosphereMHDLLASLDGLRERLREIPQADERRLQDLRTEILGRKNG
Ga0075431_10224694223300006847Populus RhizosphereMSDLLAALDSLRERLKEIPQADERRLQELKTELLGRKTGKLTEILKALPSLD
Ga0075433_1054730113300006852Populus RhizosphereMSDLLAALDSLRERLKEIPQADERRLQELKTELLGRKAGALTDILKSLPALDPDT
Ga0075434_10031605153300006871Populus RhizosphereMGDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAGAL
Ga0075424_10258085223300006904Populus RhizosphereMSDLLAALDSLRERLKEIPQADERRLQELKTELLGRKAG
Ga0075436_10059200913300006914Populus RhizosphereMPDLLAALAQLRERLQEIPQADGRRLQDLKTEILGRKAGALTQLLARLPTLD
Ga0079219_1134838533300006954Agricultural SoilMPDLLAALAQLRERLQEIPQADGRRLQDLKTEILG
Ga0075419_1084553733300006969Populus RhizosphereMSVTIEALRERLKEIPQADAHRLQELKTELLGRKSGALTEI
Ga0099794_1016821843300007265Vadose Zone SoilMRDLLPALDALRERLTEIPQADQRRLQDLKTEILGRKAGALTKI
Ga0066710_10221944833300009012Grasslands SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAGALTHILGRLPKL
Ga0066710_10234949113300009012Grasslands SoilMRDLLAALAELRERLKEIPQADEHGLSDLKTEILGRRAGALTQILGRLPKLDP
Ga0066710_10305094113300009012Grasslands SoilMRDLLAALESLRERLNEIPQADERRLQQLKTELLGRRAGALTEI
Ga0066710_10349806813300009012Grasslands SoilMRDLLAALSELRERLKEIPQADERRLQDLKTEVLGRKAGALTELLTTLPQLEPASRKA
Ga0066710_10457771613300009012Grasslands SoilMRDLLAAVHALRERLGEIPQADEHRLQDLKTAIRGRK
Ga0066710_10478627823300009012Grasslands SoilMSDLLAALDSLRERLKEIPQADERRLQELKTELLGRKAGALTEILKALP
Ga0099828_1011824253300009089Vadose Zone SoilMRDLLAAIDALRERLQEIPQADDRRLQDLKTEILGRKA
Ga0099828_1190693923300009089Vadose Zone SoilMRDLLAALTELRERLQEIPQADERRLPDLKTEILGRKAGALTQILAALPR
Ga0105073_100244743300009802Groundwater SandMSDLLAALESLRERLNEIPQADERRLQELKTELLGRKAGALTEILKVLPGLDPE
Ga0105082_107032513300009814Groundwater SandMRDLLAALTELRERLKEIPQAGERRLQDLKTEILGRKGGALTKILATLPRLEAADRKQ
Ga0126384_1105540933300010046Tropical Forest SoilMRDLLARLDGLRERLREVPLADERRLQDLRTEILGRKNGALTDIIRSLPTLDADA
Ga0126382_1223643213300010047Tropical Forest SoilMRDLLASLDGLRERLREIPQADERRLQDLRTEMMMT
Ga0127461_108271813300010084Grasslands SoilMRDLLAALAELRERLKEIPQADERRLQDLKTEILGRKAGALTKILGR
Ga0127496_110097733300010086Grasslands SoilMSDLLAALNALRERLKEIPQAYERRLQELKTELLGRKSGALTEILKALPSLDPDT
Ga0127492_105025013300010087Grasslands SoilMSDLLAALESLRERLKEIPHADERRLQELKIELLGRKAGALTEILKTLPSLDP
Ga0127490_104525413300010093Grasslands SoilMSDLLAALNSLRERLKEIPQADERRLQELKIELLGRKSGALTEILKA
Ga0127494_108080113300010107Grasslands SoilMRDLLAAIAQLRERLEEIPQADERRLPDLKTEILGRKAG
Ga0127494_114619413300010107Grasslands SoilMRDLLAALSELRERLKEIPQADERRLSDLKTEILGRKAGALTQILGRLPKLDP
Ga0127474_101749133300010108Grasslands SoilMRDLLAALAELRERLKEIPQTDERRLSDLKTEILGRKAG
Ga0127497_114151923300010109Grasslands SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAG
Ga0127460_111872343300010114Grasslands SoilMRDLLAALSELRERLKEIPQADERRLSDLKTEILGRKAGALTQILG
Ga0127495_103156813300010115Grasslands SoilMSDLLAALDSLRERLNEIPQADERRLQELKTELLGRKAGALTEILRAL
Ga0127495_109395143300010115Grasslands SoilMRDLLAALSELRERLKEIPQADERRLSDLKTEILGRK
Ga0127466_101777613300010116Grasslands SoilMSDLLAALDSLRERLNEIPQADERRLQELKIELLGRKSGALTEILKALPDL
Ga0127465_104885713300010118Grasslands SoilMSDLLAALNSLRERLKEIPQADERRLQELKTELLGRRSGALTEILKAVPGLE
Ga0127465_109130813300010118Grasslands SoilMSDLLAALDALRERLTEIPQADERRLQELKTEILGRKAGALTRILGALPS
Ga0127452_109101143300010119Grasslands SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAGALTQIIGRLPKLDPFSKKEVG
Ga0127482_116831913300010126Grasslands SoilMRDLLAALAELRERLKDIPQADERRLSGLKTEMLGRKAGALTQILARLPK
Ga0127489_110485613300010127Grasslands SoilMSDLLAALDSLREPLKEIPQSDERRLQELKTELLGRKAGALTQILKALPDLGP
Ga0127489_112246343300010127Grasslands SoilMRDLLAALSELRERLKEIPQADERRLSDLKTEILGRKAGALTQILGRLPK
Ga0127486_114873613300010128Grasslands SoilMSDLLAALDSLRERLNEIPQADERRLQELKIELLGRKSGALTEILKA
Ga0127493_111033613300010130Grasslands SoilMSDLLAALDSLRERLKEIPQADERRLQELKTELLGRKAGALTEIL
Ga0127455_108988913300010132Grasslands SoilMRDLLAAIAQLRERVEEIPQADERRLPDLKTEILGRKAGALTTIL
Ga0127484_114804013300010134Grasslands SoilMSDLLAALDSLRERLKEIPQADERRLQELKIELLGRKSGALTE
Ga0127456_107571823300010140Grasslands SoilMSDLLAALDSLRERLNEIPQADERRLQELKIELLGRKSGALTEILKAL
Ga0127456_110927713300010140Grasslands SoilMRDLLAAIDALRERLQEIPQADDRRLQDLKIEILGRKAG
Ga0127499_110895143300010141Grasslands SoilMADLLAALNALRERLSEIPQADERRLQELKTKLLGRKAG
Ga0134088_1029553513300010304Grasslands SoilMRSPDLLAAIAELRERLQEIPQADERRLQDLKTEILGRKAGAL
Ga0134088_1050943133300010304Grasslands SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAGALTHI
Ga0134067_1019114533300010321Grasslands SoilMRDLLAALSELRERLKEIPQADERRLSDLKTEILGRKAG
Ga0134086_1038304623300010323Grasslands SoilMSDLLAALDSLRERLKEIPQADERRLQDLETEVLGRKAGALTQL
Ga0134064_1003622913300010325Grasslands SoilMRDLLAALTELRERLQQIPQADERRLQDLKTEILGRKAGAL
Ga0134111_1004603913300010329Grasslands SoilMSDLLAALDSLRERLKEIPQADERRLQELKTELLGRKAGALTHILGRLPKLEPSSK
Ga0134080_1002396153300010333Grasslands SoilMRDLLAALSELRERLKEIPQADERRLQDLKTEVLGRKAGALTELLTTLPQLEPASRK
Ga0134063_1034469933300010335Grasslands SoilMRDLLAALSELRERLKEIPQADERRLSDLKTEILGRKAGALTQILGRLPKLDPAS
Ga0134071_1003128153300010336Grasslands SoilMRDLLAALTELRERLPEIPQADERRLSELKTEILGRKAGALTKILAALPRL
Ga0126377_1164269433300010362Tropical Forest SoilMRDLLARLDGLRERLREVPQADERRLQDLRTEILGRKNGALTDIIRSLPTL
Ga0126377_1181499013300010362Tropical Forest SoilMRDLLASLDGLRERLREIPQADERRLQDLRTEILGRKNG
Ga0126379_1170592833300010366Tropical Forest SoilMRDLLARLDGLRERLREVPQADERRLQDLRTEILGRKNGALTDIIRSLPTLDAD
Ga0138112_113290113300010905Grasslands SoilMRDLLAALAELRERLKEIPQADERRLSGLKTEILGRRVGALTQILGRIPKLDPASKKEVGASA
Ga0137448_108203513300011427SoilMRDLLASLDGLRERLGEIPQADERRLQELRTEILGRKAGAL
Ga0137429_100528413300011437SoilMSDLLAALNSLRERLKEIPQADERRLQELKTELLGRKAGALTKILKALPALDP
Ga0137451_101465713300011438SoilMSLDALRERLQEIPQADERQLQELKTELLGRKAGALTEILKGL
Ga0137457_112909943300011443SoilMSDLLASLEGLRERLRDISQAPERGLQDLRTEILGR
Ga0137345_104736313300012129SoilMSDLLAALNSLRERLKEIPQADERRLQELKTELLGRKAGALTEILKALPALDP
Ga0137355_101946713300012163SoilMRDLLAAVHALRERLGEIPQADEPRLQDLKTEILGRKAGA
Ga0137382_1055459413300012200Vadose Zone SoilLADLLAALNALRERLSEIPQADERRLQELKTELLGRTAGGLTTI
Ga0137362_1047116213300012205Vadose Zone SoilMSDLLAALNSLRERLKEIPQADERRLQELKTELLGRKAGQLTELL
Ga0137376_1059595843300012208Vadose Zone SoilMSDLLAALDSLRERLNEIPQADERRLQELKIELLGRKSGALTEIL
Ga0137376_1154275723300012208Vadose Zone SoilLTLRDLLAALDALRERLKEIPQADERRLQQLKTELLGRKAGALTDILKALPT
Ga0150985_11415621243300012212Avena Fatua RhizosphereMSDLLAALDSLRERLNEVPQADERRLQELKTELLGRRAGALTEILKALPSLDPD
Ga0137386_1011346053300012351Vadose Zone SoilMSLDALRERLKEIPQANEHRLQELKTELLGRKAGALTEIL
Ga0137371_1009327313300012356Vadose Zone SoilMRDLLAALTELRERLQEIPQADERRLPDLKTEILGRKAGALTKILAA
Ga0137368_1039495443300012358Vadose Zone SoilMRDLLAALASLRERLTEIPQADERRLQELKTELLG
Ga0134042_103602033300012373Grasslands SoilMRDLLAAIDALRERLQEIPQADDRRLQDLKIEILGRKAD
Ga0134042_106537213300012373Grasslands SoilMRDLLAAIAQLRERLEEIPQADERRLPDLKTEILGRKAGALTTILARVPQ
Ga0134058_107119043300012379Grasslands SoilMRDLLAALAELRERLKEIPQADERRLSDLNTEILGRKAGALTQIT
Ga0134026_118121533300012381Grasslands SoilMRLDDLRERLKEIPQADERQLQEIKTQLLGRRAGALTE
Ga0134046_100287243300012386Grasslands SoilMSDLLAALNSLRERLKEIPQADERRLQELKTELLGRRSGALTE
Ga0134046_109775713300012386Grasslands SoilMSDLLAALESLRERLKEIPQADERRLQELKTELLGRRSGALTEILKAVP
Ga0134046_114018243300012386Grasslands SoilMRDLLAALGELRERLKEIPQADERRLQDLKTEILGRKAGTLTQIL
Ga0134054_105158243300012390Grasslands SoilMRDLLAALAELRERLKEIPQADERRLQDLKTEILGRKAGALTKILGRVPHLEPASRKELGAQA
Ga0134054_108805523300012390Grasslands SoilMSDLLAALNALRERLKEIPQADERRLQELKTELLGRKAGALTEILRALP
Ga0134054_111183243300012390Grasslands SoilMRDLLAAVHALRERLGEIPQADERRLQDLKTEILGRKAGALTKILGDL
Ga0134054_123630343300012390Grasslands SoilMSDLLAALDSLRERLNEIPQADERRLQELKTELLGRKSGALTEILKALPD
Ga0134043_129128643300012392Grasslands SoilMRDLLAAIAQLRERLEEIPQADERRLPDLKTEILGRKAGALTTILARVPRLDAASKK
Ga0134044_102503823300012395Grasslands SoilMSDLLAALDALRERLTEIPQADDRRLQEIKTEILGRKAGALTRILGAL
Ga0134057_116205413300012396Grasslands SoilMSDLLAALDSLRERLNEIPQADERRLQELKTELLGRKSGALTEILKALPDLE
Ga0134056_111416543300012397Grasslands SoilMRDLLAAIDALRERLQEIPQADDRRLQDLKTEILGRKGGALTRILE
Ga0134056_115097533300012397Grasslands SoilMRDLLAALTELRERLQEIPQADERRLSDLKTEILGRKAGALTQ
Ga0134056_124462643300012397Grasslands SoilMADLLAALNALRERLSEIPQADERRLQELKTELLGRKAGALTTILGAVPSLE
Ga0134051_133255443300012398Grasslands SoilMRDLLAALSELRERLKEIPQADERRLQDLKTEVLGRKAGALTELLTTL
Ga0134055_125535013300012401Grasslands SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAGALTQILGRVPK
Ga0134055_134818723300012401Grasslands SoilMRDLLAALAELRERLKEIPQADQRRLPDLKTEILGRKAGALTNILGLLPTLDPAS
Ga0134059_115467623300012402Grasslands SoilMRDLLAAIAELRERLKEIPQADERRLSDLKTEILGRKAGALTQILGRLPKLDPASKK
Ga0134049_108438243300012403Grasslands SoilMRDLLAAIAQLRERLEEIPQADERRLPDLKTEILGRKAGALTTILARV
Ga0134024_120399113300012404Grasslands SoilMSDLLAALDALRERLTEIPQADDRRLQEIKTEILGRKAGALTRILGTLPSLEPQ
Ga0134053_121648043300012406Grasslands SoilMADLLAALNALRERLSEIPQADERRLQDLKTEILGRKAGAL
Ga0134050_105901543300012407Grasslands SoilMRDLLAAIAQLRERLEEIPQADERRLPDLKTEILGRKAGALTTIL
Ga0134045_113307543300012409Grasslands SoilMSDLLAALDSLRERLKEIPQADERRLQELKTELLGRKAGALTQILKA
Ga0134060_135288143300012410Grasslands SoilMRDLLAAIDALRERLQEIPQADDRRLQDLKIEILGRKAGALTK
Ga0134078_1020489843300014157Grasslands SoilMSDLLAALDALRERLTEIPQADDRRLQEIKTEILGRKAGALT
Ga0137420_131728423300015054Vadose Zone SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAGALTQILGRLPTLDPPSKREVGRPRMR*
Ga0137420_142944013300015054Vadose Zone SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAGALTQILGRLP
Ga0134085_1002906453300015359Grasslands SoilMRDLLAAIDALRERIQEVPQADDRRLQDLKTEILGRKGGAL
Ga0134069_113598513300017654Grasslands SoilMSDLLAALDSLRERLNEIPQADERRLQELKIELLGRKSGALTEILKALPDLGP
Ga0134074_113143843300017657Grasslands SoilMSDLLAALDALRERLTEIPQADERRLQELKTEILGRKAGAL
Ga0184626_1031914713300018053Groundwater SedimentMRDLLASLDGLRERLREIPQADERQLQELRTQILGRKAGALTEILKALPAL
Ga0184629_1036377733300018084Groundwater SedimentMRDLLAALDALRERLGEIVRADARRLQELKTEILGRKAGALTDILK
Ga0187774_1066050713300018089Tropical PeatlandMSDLLAALHTLRERLGEIPQADERRLQDLKTELLGRKAGALTKILGALPKLDDADRR
Ga0066669_1012432653300018482Grasslands SoilMRDLLAALTELRERLQEIPQADERRLQDLKTEILGRKAG
Ga0066669_1125576833300018482Grasslands SoilMRDLLAALTELRERLQEIPQADERRLQDLKTEILGRKA
Ga0180112_128821323300019238Groundwater SedimentMRDLLAAVHALRERLGEIPQADERRLQDLKTEILGRKAGALTTIL
Ga0193715_100715413300019878SoilMRDLLAALAELRERLQEIPQADDRRLPDLKTAILGRKAGALTQILARLPKLEPASKKE
Ga0179594_1041895213300020170Vadose Zone SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAGALTQILARLPKLDPS
Ga0179596_1031468313300021086Vadose Zone SoilMSDLLAALNALRERLNEIPQADERRLQELKTELLGRKAGALTEILKGLPALDP
Ga0224496_1040410913300022204SedimentMSDLLASLDGLRGRLRDVAQADAQRLQELRTELLGRKAGALTQVLKGL
Ga0224512_1031955813300022226SedimentMSDLLASLDGLRGRLRDVAQADAQRLQELRTELLG
Ga0247694_103960623300024178SoilMRDLLSALTALRERLAEIPQADARRLPELKTELLGRKSGALTEILKALPTLD
Ga0247665_101399443300024219SoilMRDLLAALAELRERLKDIPQADERRLPDLKTEILGRKAGALTKILARLPKLD
Ga0209619_1013753543300025159SoilMRDLLAALDALRERLQEIPQADERRLQELKTELLGRKTGALTDILKTLPTLDAATRKLVDETG
Ga0209642_1067658013300025167SoilMRDLPTALESLRERLKEIPQADERRLQELKTELLGRKAGALTEILKALPTLDGEGLEDLG
Ga0209519_1019465613300025318SoilMRDLLAALDALRERLQEIPQADERRLQELKTELLGRKAGALTEILKALPTLDPA
Ga0209520_1036366113300025319SoilMRDLLAALTELRERLKEIPQAGERRLKDLKTEILGRKAGALTKILATLPRLEPADRKE
Ga0209641_1008728813300025322SoilMRDLLAALTELRERLKEIPQAGERRLKDLKTEILG
Ga0207684_1049154843300025910Corn, Switchgrass And Miscanthus RhizosphereMRDLLAALTELRERLQEIPQADQRRLQDLKTEILGRKAGALTQMLGRLPKLDASAKQAVG
Ga0207684_1096354833300025910Corn, Switchgrass And Miscanthus RhizosphereMSDLLAALESLRERLKEIPQADERRLQELKTELLGRKAGALTDILKG
Ga0210089_105615413300025957Natural And Restored WetlandsMRDLLAAVQALRERLGEIPQADERRLQDLKTEFLGRKAG
Ga0208778_101214513300026025Rice Paddy SoilMRDLLAALAELRERLKEIPQADERRLPDLKTEILGRKAGALTQILGRVPQLDPASRK
Ga0207708_1118443113300026075Corn, Switchgrass And Miscanthus RhizosphereMSDLLAALEKLRERLTEIPQLDVRRLEEVKTEILGRKNGTMTEILRALPDLD
Ga0209237_104610013300026297Grasslands SoilMRDLLAALTELRERLQEIPQADERRLPDLKTEILGR
Ga0209027_116295533300026300Grasslands SoilMRDLLAALTELRERLQEIPQADERRLQDLKTEILGRKAGALTQILAALPRLE
Ga0209238_100922113300026301Grasslands SoilMRDLLAALTELRERLQEIPQADERRLQDLKTEILGRKAGALTQILAALPRL
Ga0209265_107221543300026308SoilMRDLLAALTELRERLQEIPQADERRLQDLKTEILGRKAGALTQILAALPRLEPAAKKQ
Ga0209055_114318013300026309SoilMRDLLAALAALRERLPEIPQADARRLPDLKTEILGRKNGALTEILKS
Ga0209471_120191433300026318SoilMRDLLAALAKLRERLQEIPQADERRLQDLKTEILGRKAGALTQILGRLPKLDPS
Ga0209471_121335033300026318SoilMSDLLAALNALRERLKEIPQADERRLQELKTELLGRKAGA
Ga0209801_131915623300026326SoilMRDLLAALAKLRERLQEIPQADERRLQDLKTEILGRKAGALTQILGGLPKL
Ga0209377_111185343300026334SoilMRDLLAAIDALRERLQEIPQADDRRLQDLKIEILGRKAGALTKILAAVPKLAP
Ga0209377_112699043300026334SoilMRDLLAAIAQLRERLEEIPQADEHRLPDLKTEILGRKAGALTAILARVPGLDAASRKEVGAA
Ga0209377_119870513300026334SoilMRDLLAALGALRERLTEIPQADQRRLQDLKTEILGRKAGALTKIL
Ga0209057_112998643300026342SoilMPDLLAALAKLRERLQEIPPADERRLQDLKIEILGRKAGALTQILARLP
Ga0257159_105347333300026494SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAGALTQILGR
Ga0209807_116184343300026530SoilMRDLLAALSELRERLKEIPQADERRLSDLKTEILGRKAGALTQ
Ga0209156_1031870433300026547SoilMRDLLAALTELRERLQEIPQADERRLQDLKTEILGRKAGALTKILAALPKLEPA
Ga0209161_1021167843300026548SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAGALTRILGRLPKL
Ga0209648_1071656813300026551Grasslands SoilMRDLLAALAELRERLQDIPQADERRLAELKTELLGRKSGALTAILAQLPGLEAAQKK
Ga0209577_1010631153300026552SoilMSDLLAALNALRERLKEIPQADERRLQELKTELLGRKAGALTEILKALPTL
Ga0209843_109188313300027511Groundwater SandMSDLLAGLDELRERLKEIPQADERRLQELKTELLGRKAGALTE
Ga0209076_112983913300027643Vadose Zone SoilMRDLLAALTELRERLQEIPQADERRLSDLKTEILGRKAGALTQILAALPR
Ga0209588_118590633300027671Vadose Zone SoilMSDLLAALNALRERLTEVPQADERRLQELKTEVLGRKAGALTHILAAVPSLETKDRKVVGGA
Ga0209073_1007877243300027765Agricultural SoilMRLDELREYLKEIPQADARRLQELKTELLGRKAGALTEILKSLPKLAPA
Ga0209177_1002294353300027775Agricultural SoilMRPADLLAALAELRERLKEIPQADERRLQALKTEI
Ga0209180_1030567213300027846Vadose Zone SoilMRDLLAAIDALRERLQEIPQADDRRLQDLKTEILGRKGGALTKILAA
Ga0209814_1011574313300027873Populus RhizosphereMRDLLASLDGLRERLREIPQADERRLQELRTEILGRKNGVLTEILKALPSLD
Ga0209590_1045601413300027882Vadose Zone SoilMRDLLAALAELRERLKEIPQADERRLSDLKTEILGRKAGALTRI
Ga0209590_1061793713300027882Vadose Zone SoilMRDLLAAIDALRERLQEIPQADDRRLQDLKTEILGRKGG
Ga0209382_1227834913300027909Populus RhizosphereMRDLLASLDGLRERLGEIPQADERRPQELRTEILGRKAGALTEILKALP
Ga0307472_10196970813300032205Hardwood Forest SoilMSDLLAALNALRERLNEIPQADERRLQEIKTEILGRKAGALTEILKALPGLDPE
Ga0326729_105843113300033432Peat SoilMRDLLARLDGLRERLREIPQADERRLQDLRNEILGRKNGALTEILKALPALDAD
Ga0364946_007335_3_1253300033815SedimentMRDLLASLDGLRERLREIPQADERRLQDLRTAILGRKGGAL
Ga0326723_0000642_13033_131523300034090Peat SoilMRDLLARLDGLRERLREIPQADERRLQDLRNEILGRKNGA
Ga0364931_0233758_451_6033300034176SedimentMSDLLAGLEGLRERLREIPQADARRLQELKTELLGRKAGALTDILKQLPKL
Ga0370545_057432_1_1203300034643SoilMRLDELRERLKEIPQADERRLQELKTELLGRKAGALNEIL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.