Metagenome / Metatranscriptome Family F026688

Basic Information
Family ID	F026688
Family Type	Metagenome / Metatranscriptome
Number of Sequences	197
Average Sequence Length	43 residues
Representative Sequence	MATADKKSLFVGGGNGGPISPTGNPITDLERAQDVARRYRCEF
Number of Associated Samples	153
Number of Associated Scaffolds	197

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.21 %
% of genes near scaffold ends (potentially truncated)	95.94 %
% of genes from short scaffolds (< 2000 bps)	88.83 %
Associated GOLD sequencing projects	144
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (51.269 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.736 % of family members)
Environment Ontology (ENVO)	Unclassified (21.320 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.838 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. 1JGI12679J13547_10045302 2JGI12712J15308_100998261 3JGI12659J15293_100915182 4Ga0062384_1009809432 5Ga0062387_1004091882 6Ga0062387_1011358661 7Ga0062389_1014844362 8Ga0062389_1018442032 9Ga0062389_1034700732 10Ga0062389_1046868391 11Ga0062389_1046963722 12Ga0062386_1009350091 13Ga0068966_14298083 14Ga0062388_1001223233 15Ga0066677_102990821 16Ga0066690_101216161 17Ga0070714_1010969042 18Ga0070733_101282343 19Ga0070732_101508571 20Ga0066691_108699691 21Ga0070761_102106011 22Ga0070763_107737702 23Ga0070764_102617092 24Ga0070764_103713252 25Ga0066903_1079576562 26Ga0066789_102291771 27Ga0070717_100201346 28Ga0070717_106612651 29Ga0070717_116682881 30Ga0075029_1001400221 31Ga0075029_1012348332 32Ga0075017_1004231262 33Ga0075019_100679053 34Ga0075030_1011646062 35Ga0070716_1000862853 36Ga0075014_1007543571 37Ga0070765_1009798892 38Ga0116108_11311092 39Ga0116105_10957911 40Ga0116216_100147641 41Ga0116216_106242192 42Ga0116217_107176752 43Ga0116130_12421902 44Ga0126380_102933272 45Ga0126379_111572812 46Ga0126379_127390242 47Ga0126379_132385212 48Ga0136449_1017922481 49Ga0124850_10570141 50Ga0138569_10427272 51Ga0150983_123263522 52Ga0150983_154624551 53Ga0137391_109693541 54Ga0137393_108690701 55Ga0137388_101229291 56Ga0137399_113943591 57Ga0150985_1050320722 58Ga0150984_1024045781 59Ga0137396_106174021 60Ga0137396_111978982 61Ga0126369_102387101 62Ga0157374_116767371 63Ga0181529_102589572 64Ga0181531_107466392 65Ga0181522_100758941 66Ga0181522_105863401 67Ga0157376_103678032 68Ga0137409_116012072 69Ga0132258_100987541 70Ga0132258_117536422 71Ga0182036_107867811 72Ga0182039_117914481 73Ga0182038_112719011 74Ga0187803_100459571 75Ga0187853_100776071 76Ga0187819_103129931 77Ga0187819_108043971 78Ga0187817_102295752 79Ga0187817_109281422 80Ga0187783_102629111 81Ga0187780_110180682 82Ga0187780_113333972 83Ga0187777_100956783 84Ga0187816_105189912 85Ga0187868_11492492 86Ga0187876_12839372 87Ga0187805_102082211 88Ga0187884_103487491 89Ga0187855_101713571 90Ga0187855_102179712 91Ga0187862_106321822 92Ga0187887_100243374 93Ga0187784_101907281 94Ga0187784_108957692 95Ga0187772_103041442 96Ga0187772_110584791 97Ga0187769_101562071 98Ga0187769_106222561 99Ga0066667_106941292 100Ga0184576_1054721 101Ga0181508_13922321 102Ga0182025_12297357 103Ga0210407_111160243 104Ga0210403_114046902 105Ga0210395_104681372 106Ga0210401_104105841 107Ga0210404_101790602 108Ga0210405_101801092 109Ga0210408_103856081 110Ga0210408_110992952 111Ga0210396_100180661 112Ga0210397_102392792 113Ga0210383_100764731 114Ga0210383_101136423 115Ga0210383_106307581 116Ga0210394_106350252 117Ga0210394_110866292 118Ga0210394_113158912 119Ga0210394_113463042 120Ga0210391_103094372 121Ga0210391_104218602 122Ga0210390_102018081 123Ga0210390_107661792 124Ga0210402_113826702 125Ga0210410_104805851 126Ga0210410_108479272 127Ga0126371_124284972 128Ga0213853_114093812 129Ga0242646_10304763 130Ga0242660_10030813 131Ga0212123_106110522 132Ga0242665_101430601 133Ga0224572_10057401 134Ga0208936_10504502 135Ga0208691_11024532 136Ga0209176_101239371 137Ga0207685_106367842 138Ga0207700_105805421 139Ga0209330_10076331 140Ga0209011_12209312 141Ga0209040_101525353 142Ga0209040_102409852 143Ga0209040_102766582 144Ga0209580_100581053 145Ga0209580_101746132 146Ga0209693_105566411 147Ga0209167_102502122 148Ga0209283_103506131 149Ga0209698_105979081 150Ga0209698_106136642 151Ga0209698_111717922 152Ga0209168_100084417 153Ga0302152_100700511 154Ga0302171_101684142 155Ga0302156_100711561 156Ga0302303_101787502 157Ga0302227_102304062 158Ga0311368_102183171 159Ga0311361_108157262 160Ga0311352_112474561 161Ga0311336_101842503 162Ga0311339_100195481 163Ga0311339_115459211 164Ga0302177_101157321 165Ga0302179_104829162 166Ga0302275_101369401 167Ga0311356_107535852 168Ga0210291_109852681 169Ga0302316_101003372 170Ga0265462_100958033 171Ga0302311_108318111 172Ga0265461_100887702 173Ga0265461_116507961 174Ga0265745_10322782 175Ga0302314_104058522 176Ga0170834_1016497532 177Ga0170834_1034760652 178Ga0170824_1275479612 179Ga0302326_103843263 180Ga0310686_1026848242 181Ga0310686_1041826601 182Ga0310686_1184031231 183Ga0307476_103252711 184Ga0307476_103410111 185Ga0307474_102569511 186Ga0307475_109903181 187Ga0307478_105073791 188Ga0307479_107934521 189Ga0311301_107895272 190Ga0311301_111985481 191Ga0348332_141489573 192Ga0315742_109844892 193Ga0335080_108399541 194Ga0335081_105708222 195Ga0335076_104636672 196Ga0335084_119894292 197Ga0334792_038412_1429_1554
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. 1JGI12679J13547_10045302 2JGI12712J15308_100998261 3JGI12659J15293_100915182 4Ga0062387_1004091882 5Ga0062389_1046963722 6Ga0066677_102990821 7Ga0066690_101216161 8Ga0070763_107737702 9Ga0075017_1004231262 10Ga0126379_111572812 11Ga0126379_127390242 12Ga0137388_101229291 13Ga0137396_106174021 14Ga0132258_100987541 15Ga0182039_117914481 16Ga0187819_103129931 17Ga0187780_113333972 18Ga0187772_103041442 19Ga0182025_12297357 20Ga0210394_113463042 21Ga0210391_103094372 22Ga0207700_105805421 23Ga0302171_101684142 24Ga0302177_101157321 25Ga0210291_109852681 26Ga0170834_1034760652
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42. 1Ga0150984_1024045781 2Ga0062387_1004091882 3Ga0062387_1011358661 4Ga0062389_1014844362 5Ga0066677_102990821 6Ga0066690_101216161 7Ga0070764_102617092 8Ga0066903_1079576562 9Ga0070717_100201346 10Ga0126379_127390242 11Ga0138569_10427272 12Ga0137388_101229291 13Ga0132258_100987541 14Ga0182039_117914481 15Ga0187803_100459571 16Ga0187780_113333972 17Ga0187868_11492492 18Ga0187862_106321822 19Ga0187784_108957692 20Ga0187772_103041442 21Ga0187772_110584791 22Ga0184576_1054721 23Ga0182025_12297357 24Ga0210407_111160243 25Ga0210394_113463042 26Ga0213853_114093812 27Ga0207700_105805421 28Ga0209040_102409852 29Ga0209580_100581053 30Ga0209698_111717922 31Ga0311352_112474561 32Ga0311336_101842503
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.72% β-sheet: 0.00% Coil/Unstructured: 80.28%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Pfam ID	Name	% Frequency in 197 Family Scaffolds
PF00482	T2SSF	89.85
PF03548	LolA	4.06
PF05157	T2SSE_N	2.03
PF08241	Methyltransf_11	0.51
PF17191	RecG_wedge	0.51
PF00561	Abhydrolase_1	0.51
PF04055	Radical_SAM	0.51
PF14534	DUF4440	0.51
PF12706	Lactamase_B_2	0.51
PF00437	T2SSE	0.51

COG ID	Name	Functional Category	% Frequency in 197 Family Scaffolds
COG2834	Outer membrane lipoprotein-sorting protein	Cell wall/membrane/envelope biogenesis [M]	4.06

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.27 %
Unclassified	root	N/A	48.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.27 %
Unclassified	root	N/A	48.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.27 %
Unclassified	root	N/A	48.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	49.75 %
Unclassified	root	N/A	48.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	21.83 %
Unclassified	root	N/A	48.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.40 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.40 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	18.78 %
Unclassified	root	N/A	48.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.40 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.78 %
Unclassified	root	N/A	48.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.40 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	11.17 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.51 %
Unclassified	root	N/A	48.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.40 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.11 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.51 %
Unclassified	root	N/A	48.73 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001174\|JGI12679J13547_1004530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300001471\|JGI12712J15308_10099826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300001546\|JGI12659J15293_10091518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	663	Open in IMG/M
3300004082\|Ga0062384_100980943	Not Available	603	Open in IMG/M
3300004091\|Ga0062387_100409188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300004091\|Ga0062387_101135866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300004092\|Ga0062389_101484436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	862	Open in IMG/M
3300004092\|Ga0062389_101844203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	784	Open in IMG/M
3300004092\|Ga0062389_103470073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	591	Open in IMG/M
3300004092\|Ga0062389_104686839	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.45%
Host-Associated	Host-Associated	3.55%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	24.87%
Plants	Host-Associated → Plants	3.55%
Terrestrial	Environmental → Terrestrial	71.57%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	19.80%
Peat	Environmental → Terrestrial → Peat	10.15%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.03%
Sediment	Environmental → Aquatic → Sediment	4.57%
Soil	Environmental → Terrestrial → Soil	60.91%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.51%

Habitat	Taxonomy	Distribution
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.51%
Loam	Environmental → Terrestrial → Soil → Loam	11.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.51%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.52%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.12%

Habitat	Taxonomy	Distribution
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.52%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.51%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.02%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.51%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.57%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.51%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.51%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.51%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.02%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.51%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.51%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.51%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.03%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.03%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.05%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.03%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.51%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.05%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.02%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.06%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.51%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.02%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.51%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.51%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.51%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.02%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.06%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.57%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.51%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001174	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M

Showing 1 to 10 of 153 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12679J13547_10045302	3300001174	Forest Soil	LQVKEMATADKKSLFVGGGNGGPVSPTGNPVTDLER
JGI12712J15308_100998261	3300001471	Forest Soil	MTMAEKKSIFVNGGNGGQLVTTGNPVTDLERAQDVA
JGI12659J15293_100915182	3300001546	Forest Soil	MAMAEKKSLFVNGENGGQLVTTGNPITDLERAQDVARRYRCEFVDLTD
Ga0062384_1009809432	3300004082	Bog Forest Soil	MATADKKSLFVNGENGGQMVTTGNPITDLERAQDVARRYRCE
Ga0062387_1004091882	3300004091	Bog Forest Soil	MATADKKSLFVNGENGGQMVSTGNPVTDLERAQDVARRYR
Ga0062387_1011358661	3300004091	Bog Forest Soil	MTMAEKKSIFVNGGNGGQLVSTGNPITDLERAQDVARRYRCEF
Ga0062389_1014844362	3300004092	Bog Forest Soil	MAEKKSLFVNGENASQVLTTGNPITDLERAQDVARRYRCEFVD
Ga0062389_1018442032	3300004092	Bog Forest Soil	MAEKKSLFVNGENGGQVATTGNPVTDLERAQDVARRYRCEFVD
Ga0062389_1034700732	3300004092	Bog Forest Soil	MATADKKSLFVNGENGAQLVSTGNPITDLERAQDVARRYRCEFVDLTDFQ
Ga0062389_1046868391	3300004092	Bog Forest Soil	MAMAEKKSLFVNGENGGQVVTTGNPITDLERAQDVARRYRCEFVDLTDFQLH
Ga0062389_1046963722	3300004092	Bog Forest Soil	MGIQSMATADKKSLFVHGENVAQVVSTGNPITDLERAQDVAR
Ga0062386_1009350091	3300004152	Bog Forest Soil	MAMAEKKSLFVNGENGGQVVTTGNPITDLERAQDVARRYRCEFVDLTDF
Ga0068966_14298083	3300004476	Peatlands Soil	MAEKKSLFVNGQNGGQVVATGNPITDLERAQDVARRYRCEFV
Ga0062388_1001223233	3300004635	Bog Forest Soil	MAMAEKKSLFVHGENGGQVVATTGNPITDLERAQDVARRYR
Ga0066677_102990821	3300005171	Soil	MSEKKSLFVNGADPARMAPENVSDELERAKDVARRYRCEFVNLSDFSLQHDLFKK
Ga0066690_101216161	3300005177	Soil	MAEKKSLFVNGGNGGHIADGAAVDELDRARDVARRYRCEFVDL
Ga0070714_1010969042	3300005435	Agricultural Soil	MATADKKSLFVGGGNGGPISPTGNPVTDLERAQDIARRYRCEFI
Ga0070733_101282343	3300005541	Surface Soil	MATADKKSLFVGGGNGGPISPTGNPITDLERAQDVARRYRCEFV
Ga0070732_101508571	3300005542	Surface Soil	MAMAEKKSIFVNGGNGGQIVTTGNPVTDMERAQDVARRY
Ga0066691_108699691	3300005586	Soil	MAMAEKKSLFVNGGNGGQLVTTGNPITDLERAQDVARRYRCEF
Ga0070761_102106011	3300005591	Soil	MAMAEKKSLFVNGENGGQLVTTGNPITDLERAQDVARRYRCEFVDL
Ga0070763_107737702	3300005610	Soil	MATADKKSIFVGGGNGAPLSPTGNPVSDLERAQDVARRYRCEFVD
Ga0070764_102617092	3300005712	Soil	MATADKKSLFVNGQNVEQMVTTGNPITDLERAQDVARRYRCEFVDLTDF
Ga0070764_103713252	3300005712	Soil	MAIADKKSIFVGGGNGGPLSPTGNPITDLERAQDVAR
Ga0066903_1079576562	3300005764	Tropical Forest Soil	MATADKKSVFIGGGNGAPISPTGNAVSDLERAQDVARRYRCE
Ga0066789_102291771	3300005994	Soil	MATADKKSLFVGGGNGAPISPTGNPITDSERAQDVARRYRCEF
Ga0070717_100201346	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MATEKKSLFVNGGNGAQMVSTGNPITDLERAQDVARRYRCEFVDLTDFQLHH
Ga0070717_106612651	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MATADKKSLFVHGENGGQVVTTGNPATDLERAQDVARRY
Ga0070717_116682881	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MATADKKSIFVGGGNGGPISPTGNPVTDLERAQDVARRYRCEFIDLSGFELHHE
Ga0075029_1001400221	3300006052	Watersheds	MATADKKSLFVGGGNGGPISPTGNPVTDLERAQDVARR
Ga0075029_1012348332	3300006052	Watersheds	MAMAEKKSVFMGGGNGGPISPTGNPLTDLERAQDVA
Ga0075017_1004231262	3300006059	Watersheds	MAEKKSVFVNGGNGGPISPTGNPLTDLERAQDVARRYRCEFI
Ga0075019_100679053	3300006086	Watersheds	MATADKKSLFVGGGNGGPISPTGNPVTDLERAQDVARRYRCEFIDLSGFELHH
Ga0075030_1011646062	3300006162	Watersheds	MATADKKSIFVGGGNGAPISPTGNPLTDLERAQDVARRYRC
Ga0070716_1000862853	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MATADKKSLFVGGGNGGPISPTGNPVTDLERAQDIARRYR
Ga0075014_1007543571	3300006174	Watersheds	MAMAEKKSLFVHGENGGQVVTTGNPVTDLERAQDVARRYR
Ga0070765_1009798892	3300006176	Soil	MATADKKSIFVGGGNGGPISPTGNPVTDLERAQDVARRYRCEFI
Ga0116108_11311092	3300009519	Peatland	MAMAEKKSLFVHGENGGQVVTTGNPITDLERAQDVARR
Ga0116105_10957911	3300009624	Peatland	MATADKKSLFVNGENAAQMVTTGNPITDLERAQDVARRYRC
Ga0116216_100147641	3300009698	Peatlands Soil	MAMADKKSLFVNGGSGGPISPTGNPITDLERAQDVARR
Ga0116216_106242192	3300009698	Peatlands Soil	MAMADKKSIFVNGGNGGQLVTTGNPVTDLERAQDIA
Ga0116217_107176752	3300009700	Peatlands Soil	MATADKKSIFVNGGNGGPISPTGNPLTDLERAQDVARRYRCEFV
Ga0116130_12421902	3300009762	Peatland	MATADKKSLFVHGENGGQVVTTGNPVTDLERAQDVAR
Ga0126380_102933272	3300010043	Tropical Forest Soil	MATADKKSLFVGGGNGGPISPTGNPVTDIERAQDVARRYRCEFVDLS
Ga0126379_111572812	3300010366	Tropical Forest Soil	MATADKKSLFVGGGNGGPISPTGNPVTDIERAQDVARRYRCEFVDLSGFELHHE
Ga0126379_127390242	3300010366	Tropical Forest Soil	MAMAEKKSVFVNGENGGQVATPRAGDLEKAQDVARRYRCE
Ga0126379_132385212	3300010366	Tropical Forest Soil	MGFAMATADKKSLFVGGGNGGPISPTGNPVTDLERAQDVARRYRCEFIDLSGFELH
Ga0136449_1017922481	3300010379	Peatlands Soil	MATADKKSIFVNGGNGGPISPTGNPLTDLERAQDVARRYRCEFVDLS
Ga0124850_10570141	3300010863	Tropical Forest Soil	MATADKKSLFVGGGNGSPISPTGNAVTDLERAQDVARRYRC
Ga0138569_10427272	3300011079	Peatlands Soil	MAMAEKKSLFVNGQNGGQVVATGNPITDLERAQDVARRYRCEFVDLTD
Ga0150983_123263522	3300011120	Forest Soil	MTMAEKKSIFVNGGNGGQLVTTGNPVTDLERAQDVARRYRCEF
Ga0150983_154624551	3300011120	Forest Soil	MAMAEKKSLFVNGQNGGQMVSTGNPITDLERAQDVA
Ga0137391_109693541	3300011270	Vadose Zone Soil	MAMAEKKSLFVNGGNGGQIVTTGNPITDLERAQDVARRY
Ga0137393_108690701	3300011271	Vadose Zone Soil	MATEKKSLFVNGGNGGQMVSTGNPVTDLERAQDVARRYRCE
Ga0137388_101229291	3300012189	Vadose Zone Soil	MAEKVAEKKSLFVNGGNGGHVVNGTAAEELDRARDIARR
Ga0137399_113943591	3300012203	Vadose Zone Soil	MATADKKSLFVHGENGGQVVTTGNPITDLERAQDVARRYRCE
Ga0150985_1050320722	3300012212	Avena Fatua Rhizosphere	MATADKKSLFVGGGNGGPISPTGNPVTDLERAQDVARRYRCEFIDLTDF*
Ga0150984_1024045781	3300012469	Avena Fatua Rhizosphere	MATADKKSLFVGGGNGGPISPTGNPITDLERAQDVARRYRCEF
Ga0137396_106174021	3300012918	Vadose Zone Soil	MATADQRSLFVQGENGGQVVTTGNPITDLERAQDV
Ga0137396_111978982	3300012918	Vadose Zone Soil	MAMAEKKSLFVNGGNGGQIVTTGNPITDLERAQDVARRYRCEFVDLTDFQ
Ga0126369_102387101	3300012971	Tropical Forest Soil	MATADKKSLFVGGGNGGPISPTGNPVTDLERAQDVARRYRCEFIDLSGF
Ga0157374_116767371	3300013296	Miscanthus Rhizosphere	MATADKKSLFVNGGNGGPISPTGNPITDLERAQDVARRYRCEFVDLSGFELH
Ga0181529_102589572	3300014161	Bog	MATADKKSIFVGGGNGAPLSPTGNPLTDLERAQDVARRYRCEFIDLSGFE
Ga0181531_107466392	3300014169	Bog	MATADKKSLFVHGENVAQAVSTGNPITDLERAQDVARRYRCEFVDLTDFQLHH
Ga0181522_100758941	3300014657	Bog	MAMAEKKSLFVHGENGGQVATTGNPITDLERAQDVARRYRCQFVDL
Ga0181522_105863401	3300014657	Bog	MATADKKSLFVHGENGGQVVTTGNPVTDLERAQDVARRY
Ga0157376_103678032	3300014969	Miscanthus Rhizosphere	MATADKKSLFVNGGNGGPISPTGNPITDLERAQDVARRYR
Ga0137409_116012072	3300015245	Vadose Zone Soil	MATADKKSLFLGGNGGPISPTGNPLTDLERAQDVARRYRCEFIDL
Ga0132258_100987541	3300015371	Arabidopsis Rhizosphere	MAEKKSLFVNGGNGGRLTPEGVADELERAQDTARRYRCEFVDLNDF
Ga0132258_117536422	3300015371	Arabidopsis Rhizosphere	MATADKKSLFVNGGNGGPISPTGNPIPDLERAQDVARRYRCEFV
Ga0182036_107867811	3300016270	Soil	MATADKKSLFVGGGNGSPISPTGNAVTDLERAQDVARRYRCEFIDLS
Ga0182039_117914481	3300016422	Soil	MATADKKSLFVGGGNGGPISPTGNAVTDLARAQDVARP
Ga0182038_112719011	3300016445	Soil	MATADKKSLFVGGGNGSPISPTGNAVTDLERAQDVARRYR
Ga0187803_100459571	3300017934	Freshwater Sediment	MADKKSLFVNGGNGGQVVQTGNAVTDLERAQDVARRYRCEFVDLTDFELHHEL
Ga0187853_100776071	3300017940	Peatland	MATADKKSLFVHGENGGQVVTTGNPVTDLERAQDVARRYRCEF
Ga0187819_103129931	3300017943	Freshwater Sediment	MAMAEKKTLFANGVNSGPISPTGNPITDLERAQDVARR
Ga0187819_108043971	3300017943	Freshwater Sediment	MATADKKSLFVGGGNGGPVSPTGNPVTDLERAQDVARRYRCEFIDLTDFE
Ga0187817_102295752	3300017955	Freshwater Sediment	MATADKKSLFVGGGNGGPISPTGNAVTDLERAQDVARR
Ga0187817_109281422	3300017955	Freshwater Sediment	MATADKKSLFVNGGNGGPISPTGNPITDLERAQDVARRY
Ga0187783_102629111	3300017970	Tropical Peatland	MATADKKSLFVGGGNGAPISPTGNPVTDLERAQDVARRYRCE
Ga0187780_110180682	3300017973	Tropical Peatland	MATADKKSLFVGGGNGAPISPTGNAVSDLERAQDVARRYRCEFIDLSGFEL
Ga0187780_113333972	3300017973	Tropical Peatland	MADKKSLFVNGGNGGQMVSTANADADVERAQDVARRYRCEFVDLTDFELH
Ga0187777_100956783	3300017974	Tropical Peatland	MAMADKKSLFVNGGNGGPLSPTGNVITDLERAQDVARRYRCEFVD
Ga0187816_105189912	3300017995	Freshwater Sediment	MATADKKSLFVGGGNGGPLSPTGNPATDLERAQDVARRYRCEFVDLSGFEL
Ga0187868_11492492	3300018002	Peatland	MAMADKKSLFVNATNGGQMVSTGNPITDLERAQDVARRYRCEFV
Ga0187876_12839372	3300018003	Peatland	MADKKSLFVNATNGGQMVSTGNPITDLERAQDVARRYRCEFVDLTDFELHH
Ga0187805_102082211	3300018007	Freshwater Sediment	MATADKKSLFVNRCNGGPIGPTGNPITDLERAQDVARRYRCEFIDLS
Ga0187884_103487491	3300018009	Peatland	MAMAEKKSLFVHGENGGQVVTTGNPITDLERAQDVARRYRCEFV
Ga0187855_101713571	3300018038	Peatland	MAMAEKKSLFVHGENGGQLTTTGNPITDLERAQDVARRYRCEFVDLTDFQLH
Ga0187855_102179712	3300018038	Peatland	MAMAEKKSLFVHGESGGQVVTTGNPITDLERAQDVARRYRCQ
Ga0187862_106321822	3300018040	Peatland	MATVDKKSIFVGGGNGAPLSPTGNPVSDLERAQDVARRYRCEFVDLSGFELHH
Ga0187887_100243374	3300018043	Peatland	MATADKKSLFVGGGNGGPISPTGNPITDLERAQDVARRYRCEFVD
Ga0187784_101907281	3300018062	Tropical Peatland	MATADKKTLFVGGGNGGPVSPTGNPVTDLERAQDVA
Ga0187784_108957692	3300018062	Tropical Peatland	MPEKKSLFVNGETGGVMTTTGNAATDLERAQDVARRYRCEFVDLTDF
Ga0187772_103041442	3300018085	Tropical Peatland	MADKKSVFVNGGNGGSVATATGNPLSDMERAQDIARRY
Ga0187772_110584791	3300018085	Tropical Peatland	MAEKKSLFVNGQSGAQVVTTGSPVSDLERAQDVARRYRCEFVDLTDFQ
Ga0187769_101562071	3300018086	Tropical Peatland	MATADKKSVFVGGGNGGPISPSGNAVTDLERAQDVAR
Ga0187769_106222561	3300018086	Tropical Peatland	MATADKKSLFVGGGNGAPISPTGNPVTDLERAQDV
Ga0066667_106941292	3300018433	Grasslands Soil	MATADKKSLFVGGGNGGPISPTGNPVTDLERAQDVARRYRCEFIDLTDFEL
Ga0184576_1054721	3300019156	Soil	MATADKKSLFVHGENGGQVVTTGNPITDLERAQDVARRYRCEFV
Ga0181508_13922321	3300019256	Peatland	MATADKKSLFVGGGNGGPISPTGNPITDLERAQDV
Ga0182025_12297357	3300019786	Permafrost	MATADKKSLFVNGGTAAPISPTGNPLTDLERAQDVARRLSL
Ga0210407_111160243	3300020579	Soil	MAMADKKSIFVNGGNGGQLVSTGNPVTDLERAQDIARR
Ga0210403_114046902	3300020580	Soil	MATADKKSLFVNGGNGGPISPTGNPITDLERAQDVARHYRCEFVDLSGFELHHELV
Ga0210395_104681372	3300020582	Soil	MAMAEKKSLFVHGENGGQVVTTGNPITDLERAQDVARRY
Ga0210401_104105841	3300020583	Soil	MIQGMATADKKSLFVHGENASQMVTTGNPITDLERAQDVARRYR
Ga0210404_101790602	3300021088	Soil	MAEKKSLFVNGENGGQVVTTGNPITDLERAQDVARRYR
Ga0210405_101801092	3300021171	Soil	MATADKKSLFVNGGNGGPISPTGNPITDLERAQDVARRYRCEFVD
Ga0210408_103856081	3300021178	Soil	MATADKKSLFVNGGNGGQVATTGNPITDLERAQDVARR
Ga0210408_110992952	3300021178	Soil	MATADKKSIFVGGGNGGPISPTGNPITDLERAQDVARRYRCEFIDLSG
Ga0210396_100180661	3300021180	Soil	MATADKKSLFVNGGNGGPISPTGNPITDLERAQDVARRYRCEFIDPSGFELQ
Ga0210397_102392792	3300021403	Soil	MATADKKSLFVNGGNGGPISPTGNPLTDLERAQDVARRYRCDFVDLSGFELHH
Ga0210383_100764731	3300021407	Soil	MAEKKSLFVHGENGGQVVATGNPITDLERAQDVAR
Ga0210383_101136423	3300021407	Soil	MATADKKSLFVHGENGGQVVTTGNPITDLERAQDVARRYRCEF
Ga0210383_106307581	3300021407	Soil	MATADKKSLFVHGGNGGPVSPTGNPITDLERAQDVARRYRCEFVDLSGFEL
Ga0210394_106350252	3300021420	Soil	MATADKKSLFIGGNGGPISPTGNPITDLERAQDVARRYRCEFIDLSGFELHH
Ga0210394_110866292	3300021420	Soil	MAMADKKSLFVNGENGGQVVTTGNPITDLERAQDVARRYRCEFVDLTDF
Ga0210394_113158912	3300021420	Soil	MAEKKSLFVNGENGGQVVTTGNPITDLERAQDVARRYRCEFV
Ga0210394_113463042	3300021420	Soil	MAEKKSVFVHGGDPASIIQEGNKPVNEVERAQDTARRYRCEFVDLKEFQ
Ga0210391_103094372	3300021433	Soil	MIQGMATADKKSLFVHGENASQMVTTGNPITDLER
Ga0210391_104218602	3300021433	Soil	MATADKKSLFVHGGNGGQVVTTGNPITDLERAQDVARRYRCQFVD
Ga0210390_102018081	3300021474	Soil	MATADKKSLFVGGGNGGPISPTGNPITDLERAQDVARRYRCEFVDLSGFELHH
Ga0210390_107661792	3300021474	Soil	MATADKKSLFVNGGNGGPISPTGNPITDLERAQDVARRYRCEFVDLSGFEL
Ga0210402_113826702	3300021478	Soil	MATADKKSIFVGGGNGGPISPTGNPITDLERAQDVARRYRCEFIDL
Ga0210410_104805851	3300021479	Soil	MAMADKKSLFVNGGNGGPISPTGNPITDLERAQDVARRYRCEFVDLT
Ga0210410_108479272	3300021479	Soil	MAMAEKKSLFVNGENGGQLVTTGNPITDLERAQDVARRYRC
Ga0126371_124284972	3300021560	Tropical Forest Soil	MATADKKSLFVGGGNGAPISPSGNAVTDLERAQDVARRYRC
Ga0213853_114093812	3300021861	Watersheds	MAMAEKKSVFVGGGNSGPISPTGNPVTDLERAQDVARRYRCEFVD
Ga0242646_10304763	3300022502	Soil	MATADKKSLFVGGGNGGPISPTGNPITDLERAQDVARRYRC
Ga0242660_10030813	3300022531	Soil	MATADKKSIFVGGGNGGPISPTGNPVTDLERAQDVARRYRC
Ga0212123_106110522	3300022557	Iron-Sulfur Acid Spring	MATADKKSLFVNGENGGQVVTTGNPITDLERAQDV
Ga0242665_101430601	3300022724	Soil	MATADKKSIFVGGGNGGPISPTGNPVTDLERAQDVARRYRCEFIDLSGF
Ga0224572_10057401	3300024225	Rhizosphere	MTMAEKKSIFVNGGNGGQLVTTGNPVTDLERAQDVARRYRCEFI
Ga0208936_10504502	3300025404	Peatland	MATVDKKSIFVGGGNGAPLSPTGNPVSDLERAQDVARRYRCEFIDLSG
Ga0208691_11024532	3300025612	Peatland	MATADKKSLFVHGENGGGQVVTTGNPITDLERAQDVARRYRCEFVDLTDFQ
Ga0209176_101239371	3300025854	Arctic Peat Soil	MATADKKSLFVNGGNGGPISPTGNPITDLERAQDVARRYRCEFID
Ga0207685_106367842	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MATADKKSLFVGGGNGGPISPTGNPVTDLERAQDVARRYRCEFIA
Ga0207700_105805421	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAEKKSLFVHGGNGGPVVTGTAAEELERAKDVARRYRCEF
Ga0209330_10076331	3300027619	Forest Soil	MATADKKSLFVHGGNGGPISPTGNPVTDLERAQDVARRYRCEFVDLQ
Ga0209011_12209312	3300027678	Forest Soil	MATEKKSLFVNGGNGSQLVSTGNPVTDLERAQDVAR
Ga0209040_101525353	3300027824	Bog Forest Soil	MATADKKSIFVGGGNGGPISPTGNPITDLERAQDVARRY
Ga0209040_102409852	3300027824	Bog Forest Soil	MAEKKSIFVNGENGAQVVTTGNPVTDLERAQDVARRY
Ga0209040_102766582	3300027824	Bog Forest Soil	MAMAEKKSLFVNGENGGQVITTGNPITDLERAQDVARRYRCE
Ga0209580_100581053	3300027842	Surface Soil	MAMAEKKSIFVNGGNGGQIVTTGNPVTDMERAQDVARRYRCEFI
Ga0209580_101746132	3300027842	Surface Soil	MATADKKSIFVGGGNGTPISPTGNPVTDLERAQDVARRYRCEFVDLT
Ga0209693_105566411	3300027855	Soil	MATADKKSIFVGGGNGAPLSPTGNPVSDLERAQDVARRY
Ga0209167_102502122	3300027867	Surface Soil	MATADKKSIFVGGGNGGPISPTGNPLTDLERAQDVARRYRCEFVDLSGF
Ga0209283_103506131	3300027875	Vadose Zone Soil	MAEKVAEKKSLFVNGGNGGHVVNGTAAEELDRARDIA
Ga0209698_105979081	3300027911	Watersheds	MATADKKSIFVGGGNGGPLSPTGNPITDLERAQDVARR
Ga0209698_106136642	3300027911	Watersheds	MAMAEKKSVFMGGGNGGPISPTGNPLTDLERAQDVARRY
Ga0209698_111717922	3300027911	Watersheds	MAMAEKKTLFANGVNSGPISPTGNPITDLERAQDVARRYRCEFVDLTDFE
Ga0209168_100084417	3300027986	Surface Soil	MAEKKSLFVNGGNGGPISPTGNPVTDLERAQDVARRYRCEF
Ga0302152_100700511	3300028572	Bog	MATADKKSLFVNGENAAQMVTTGNPITDLERAQDVAR
Ga0302171_101684142	3300028651	Fen	MKSMAEKKSVFVNGGNGGQVIAGAPVDGMERAQDVAR
Ga0302156_100711561	3300028748	Bog	MATADKKSLFVNGENAAQMVTTGNPITDLERAQDVARRYRCEFVDLTDFQLHH
Ga0302303_101787502	3300028776	Palsa	MATAEKKSLFVHGENGGQVVTTGNPITDLERAQDVA
Ga0302227_102304062	3300028795	Palsa	MATVDKKSIFVGGGNGAPLSPTGNVITDLERAQDVARRYR
Ga0311368_102183171	3300029882	Palsa	MAEKKSIFVNGGNGGQLVSTGNPITDLERAQDVARR
Ga0311361_108157262	3300029911	Bog	MAMAEKKSLFVHGENGGQVVTTGNPITDLERAQDVARRYRCE
Ga0311352_112474561	3300029944	Palsa	MVMAEKKSLFVNGANGGQVITSGNPITDLERAQDVARRYRCEFVDLTDFQ
Ga0311336_101842503	3300029990	Fen	MKSMAEKKSVFVNGGNGGQVIAGAPVDGMERAQDVARRYRCEF
Ga0311339_100195481	3300029999	Palsa	MATAEKKSLFVHGENGGQVVTTGNPITDLERAQDV
Ga0311339_115459211	3300029999	Palsa	MATADKKSLFVSGENVGQMVTTGNPITDLERAQDVA
Ga0302177_101157321	3300030053	Palsa	MNPGMATADKKSLFVNGGNGGPISPTGNPITDLERAQ
Ga0302179_104829162	3300030058	Palsa	MATADKKSLFVGGANGTPISPTGNPLTDLERAQDVARRYRCEFIDL
Ga0302275_101369401	3300030518	Bog	MAMAEKKSLFVHGENGGQVVTTGNPITDLERAQDVARRYR
Ga0311356_107535852	3300030617	Palsa	MATADKKSLFVGGANGTPISPTGNPLTDLERAQDVARRYRCEFI
Ga0210291_109852681	3300030626	Soil	MATADKKSLFVNGENGGPSVSTGNPITDLERAQDVARRYRCEFVDLTDFQLHHELKKKK
Ga0302316_101003372	3300030646	Palsa	MATAEKKSLFVHGENGGQVVTTGNPITDLERAQDVARR
Ga0265462_100958033	3300030738	Soil	MAEKKSIFVNGGNGGQLVTTGNPVTDLERAQDVARRYRCEFI
Ga0302311_108318111	3300030739	Palsa	MATAEKKSLFVHGENGGQVVTTGNPITDLERAQDVARRYRCE
Ga0265461_100887702	3300030743	Soil	MAEKKSIFVNGGNGGQLVTTGNPVTDLERAQDVARRYRCEFIENRIK
Ga0265461_116507961	3300030743	Soil	MAEKKSLFVNGQQAGQVVATGNPITDLERAQDVARRYRCEFVD
Ga0265745_10322782	3300030759	Soil	MAMAEKKSLFVHGENGGQVVTTGNPITDLERAQDVARRYRCEFVDLADFQL
Ga0302314_104058522	3300030906	Palsa	MATAEKKSLFVHGENGGQVVTTGNPITDLERAQDVARRYRCEF
Ga0170834_1016497532	3300031057	Forest Soil	MATADKKSLFVHGQNGGQVVTTGNPITDLERAQDVARRYRAASSWT
Ga0170834_1034760652	3300031057	Forest Soil	MATADKKSLFIGGNGGPISPTGNPITDLERAQDVARRYRCEFVDLSGFELHHEEYKIEKKKRKKLI
Ga0170824_1275479612	3300031231	Forest Soil	MATADKKSLFVNGGTGGPISPTGNPITDLERAQDVARRYR
Ga0302326_103843263	3300031525	Palsa	MATADKKSLFVNGQNAEQMVTTGNPITDLERAQDVARRYRCEFVDLTDF
Ga0310686_1026848242	3300031708	Soil	MATADKKSLFVHGENGGQVVTTGNPVTDLERAQDVARRYRCE
Ga0310686_1041826601	3300031708	Soil	MATADKKSLFVNGENGAQVVTTGNPITDLERAQDVARRYRCE
Ga0310686_1184031231	3300031708	Soil	MAEKKSIFVNGGNGGQLVTTGNPVTDLERAQDVARRYRC
Ga0307476_103252711	3300031715	Hardwood Forest Soil	MATADKKSLFVNGGNGGQMVTTGNPVTDLERAQDVARRYRCEFV
Ga0307476_103410111	3300031715	Hardwood Forest Soil	MATADKKSLFVNGGNGGPISPTGNPITDLERAQDV
Ga0307474_102569511	3300031718	Hardwood Forest Soil	MAMAEKKSLFVHGENGGQVVTTGNPITDLERAQDVAR
Ga0307475_109903181	3300031754	Hardwood Forest Soil	MAMAEKKSLFVNGGNGGQIVTTGNPVTDLERAQDVARRYRCEFV
Ga0307478_105073791	3300031823	Hardwood Forest Soil	MATADKKSLFVNGGNGGPISPTGNPVTDLERAQDVA
Ga0307479_107934521	3300031962	Hardwood Forest Soil	MAMAEKKSLFVNGENGGQVVTTGNPITDLERAQDVARRYRC
Ga0311301_107895272	3300032160	Peatlands Soil	MATADKKSLFVGGGNGGPISPTGNPITDLERAQDVARRYRCEFVDLSGFELHHEL
Ga0311301_111985481	3300032160	Peatlands Soil	MATADKKSIFVNGGNGGPISPTGNPLTDLERAQDVARRYRCEFIDLSGFE
Ga0348332_141489573	3300032515	Plant Litter	MATADKKSLFVHGESGGQMVTTGNPITDLERAQDVARRYRCQ
Ga0315742_109844892	3300032756	Forest Soil	MAEKKSIFVNGGNGGQLVTTGNPVTDLERAQDVARRYRCEFID
Ga0335080_108399541	3300032828	Soil	MATADKKSLFVNGGNGGPISPTGNVVSDLERAQDVARRYRCEFIDLSNFELHHEL
Ga0335081_105708222	3300032892	Soil	MAEKKSVFVGGGNGGPISPTGNAVTDLERAQDVARRYRCEF
Ga0335076_104636672	3300032955	Soil	MAMADKKSLFVNGGNGGPISPTGNPITDLERAQDVARRYRCEFVDL
Ga0335084_119894292	3300033004	Soil	MATADKKSLFVGGGNGAPISPTGNAITDLERAQDVARRYRCE
Ga0334792_038412_1429_1554	3300033888	Soil	MATADKKSLFVNGGNGGQMVSTGNPVTDLERAQDVARRYRCE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F026688

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences