Metagenome / Metatranscriptome Family F026679

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F026679
Family Type	Metagenome / Metatranscriptome
Number of Sequences	197
Average Sequence Length	46 residues
Representative Sequence	LTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ
Number of Associated Samples	163
Number of Associated Scaffolds	197

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	85.79 %
% of genes from short scaffolds (< 2000 bps)	79.19 %
Associated GOLD sequencing projects	157
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (76.142 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.289 % of family members)
Environment Ontology (ENVO)	Unclassified (27.919 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.162 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.00% β-sheet: 26.67% Coil/Unstructured: 69.33%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 197 Family Scaffolds
PF01966	HD	4.57
PF01464	SLT	4.06
PF04075	F420H2_quin_red	3.05
PF12840	HTH_20	2.54
PF00664	ABC_membrane	2.03
PF13424	TPR_12	2.03
PF00171	Aldedh	2.03
PF00561	Abhydrolase_1	2.03
PF12697	Abhydrolase_6	1.02
PF12867	DinB_2	1.02
PF05157	T2SSE_N	1.02
PF07883	Cupin_2	1.02
PF13511	DUF4124	1.02
PF13508	Acetyltransf_7	1.02
PF05147	LANC_like	1.02
PF00293	NUDIX	1.02
PF00589	Phage_integrase	0.51
PF10417	1-cysPrx_C	0.51
PF04978	DUF664	0.51
PF00005	ABC_tran	0.51
PF01590	GAF	0.51
PF01061	ABC2_membrane	0.51
PF05726	Pirin_C	0.51
PF01027	Bax1-I	0.51
PF00082	Peptidase_S8	0.51
PF12681	Glyoxalase_2	0.51
PF10282	Lactonase	0.51
PF01709	Transcrip_reg	0.51
PF00932	LTD	0.51
PF08241	Methyltransf_11	0.51
PF00291	PALP	0.51
PF02861	Clp_N	0.51
PF00165	HTH_AraC	0.51
PF07508	Recombinase	0.51
PF07837	FTCD_N	0.51
PF01425	Amidase	0.51
PF03167	UDG	0.51
PF13408	Zn_ribbon_recom	0.51
PF01152	Bac_globin	0.51
PF13527	Acetyltransf_9	0.51
PF00873	ACR_tran	0.51
PF00196	GerE	0.51
PF03795	YCII	0.51
PF00581	Rhodanese	0.51
PF12802	MarR_2	0.51
PF01042	Ribonuc_L-PSP	0.51
PF03992	ABM	0.51
PF13602	ADH_zinc_N_2	0.51
PF06983	3-dmu-9_3-mt	0.51
PF01636	APH	0.51
PF02771	Acyl-CoA_dh_N	0.51
PF01609	DDE_Tnp_1	0.51
PF00392	GntR	0.51
PF04191	PEMT	0.51
PF03404	Mo-co_dimer	0.51
PF08327	AHSA1	0.51

COG ID	Name	Functional Category	% Frequency in 197 Family Scaffolds
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	2.03
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	2.03
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	2.03
COG4403	Lantibiotic modifying enzyme	Defense mechanisms [V]	1.02
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.51
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.51
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.51
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.51
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.51
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.51
COG3643	Glutamate formiminotransferase	Amino acid transport and metabolism [E]	0.51
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.51
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.51
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.51
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.51
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.51
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.51
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.51
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.51
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.51
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.51
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.51
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.51
COG0217	Transcriptional and/or translational regulatory protein YebC/TACO1	Translation, ribosomal structure and biogenesis [J]	0.51
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.51

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.14 %
Unclassified	root	N/A	23.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.14 %
Unclassified	root	N/A	23.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.14 %
Unclassified	root	N/A	23.86 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.93 %
Unclassified	root	N/A	23.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.51 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.89 %
Unclassified	root	N/A	23.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.05 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.24 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5.08 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.05 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.51 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.86 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.11 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.57 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.05 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.02 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.02 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.51 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.51 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.51 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.51 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.51 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	0.51 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.11 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.05 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	1.52 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	0.51 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.51 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.51 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.51 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.51 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.51 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.51 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.51 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.51 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.51 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.51 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.11 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.05 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1.52 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	0.51 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	0.51 %
Paenarthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Paenarthrobacter	0.51 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.51 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.51 %
Humibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus	0.51 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.51 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.51 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.51 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.51 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.51 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.11 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.05 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1.52 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.51 %
unclassified Kutzneria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → unclassified Kutzneria	0.51 %
unclassified Gaiella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella	0.51 %
unclassified Paenarthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Paenarthrobacter → unclassified Paenarthrobacter	0.51 %
unclassified Humibacillus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → unclassified Humibacillus	0.51 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.51 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.51 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.51 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.51 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.51 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.51 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.11 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.05 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1.52 %
Gaiella sp. SCGC AG-212-M14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	0.51 %
Humibacillus sp. DSM 29435	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → unclassified Humibacillus → Humibacillus sp. DSM 29435	0.51 %
Paenarthrobacter sp. DKR-5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Paenarthrobacter → unclassified Paenarthrobacter → Paenarthrobacter sp. DKR-5	0.51 %
Kutzneria sp. 744	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → unclassified Kutzneria → Kutzneria sp. 744	0.51 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.51 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.51 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.51 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.51 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.51 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.51 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.51 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.51 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459012\|GOYVCMS02GAAKT	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300000858\|JGI10213J12805_10147689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → unclassified Humibacillus → Humibacillus sp. DSM 29435	532	Open in IMG/M
3300004114\|Ga0062593_102646000	Not Available	570	Open in IMG/M
3300004463\|Ga0063356_101857335	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005105\|Ga0066812_1006950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300005171\|Ga0066677_10093461	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300005174\|Ga0066680_10838803	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005332\|Ga0066388_100420470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1980	Open in IMG/M
3300005332\|Ga0066388_100702173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1618	Open in IMG/M
3300005345\|Ga0070692_11049200	Not Available	573	Open in IMG/M
3300005434\|Ga0070709_10128053	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300005434\|Ga0070709_10297171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1178	Open in IMG/M
3300005434\|Ga0070709_10302454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1169	Open in IMG/M
3300005434\|Ga0070709_11600153	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005434\|Ga0070709_11760358	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005439\|Ga0070711_100311240	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300005445\|Ga0070708_100668135	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300005468\|Ga0070707_100273436	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300005471\|Ga0070698_100260183	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300005471\|Ga0070698_100294655	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300005530\|Ga0070679_101707750	Not Available	578	Open in IMG/M
3300005556\|Ga0066707_10505588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300005564\|Ga0070664_101852489	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005564\|Ga0070664_102149233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300005614\|Ga0068856_100443543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1319	Open in IMG/M
3300005615\|Ga0070702_100611456	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300005764\|Ga0066903_100377586	All Organisms → cellular organisms → Bacteria	2314	Open in IMG/M
3300005764\|Ga0066903_101446403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1294	Open in IMG/M
3300005764\|Ga0066903_103533153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	842	Open in IMG/M
3300005764\|Ga0066903_104607831	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005764\|Ga0066903_105983012	Not Available	637	Open in IMG/M
3300005764\|Ga0066903_106474307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300005764\|Ga0066903_108440195	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300006173\|Ga0070716_100416244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	971	Open in IMG/M
3300006175\|Ga0070712_100477802	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300006175\|Ga0070712_101596918	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300006237\|Ga0097621_100905224	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300006844\|Ga0075428_101654204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	669	Open in IMG/M
3300006871\|Ga0075434_100983925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	858	Open in IMG/M
3300006876\|Ga0079217_10843991	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006894\|Ga0079215_10220428	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300006914\|Ga0075436_100465370	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300009137\|Ga0066709_103598334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300009156\|Ga0111538_12991431	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300009174\|Ga0105241_11484056	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300009176\|Ga0105242_10468912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1191	Open in IMG/M
3300009176\|Ga0105242_11119461	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300009553\|Ga0105249_12528740	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300009792\|Ga0126374_10900337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	685	Open in IMG/M
3300010043\|Ga0126380_10073644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1948	Open in IMG/M
3300010047\|Ga0126382_12497998	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300010154\|Ga0127503_10488201	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300010335\|Ga0134063_10419938	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300010359\|Ga0126376_11650939	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300010360\|Ga0126372_10059419	All Organisms → cellular organisms → Bacteria	2649	Open in IMG/M
3300010360\|Ga0126372_10207125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1640	Open in IMG/M
3300010361\|Ga0126378_10462286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1383	Open in IMG/M
3300010366\|Ga0126379_10996584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	942	Open in IMG/M
3300010371\|Ga0134125_11263713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	806	Open in IMG/M
3300010376\|Ga0126381_103116090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300010398\|Ga0126383_10837256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → unclassified Kutzneria → Kutzneria sp. 744	1004	Open in IMG/M
3300010398\|Ga0126383_12672390	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300010399\|Ga0134127_13222294	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300010400\|Ga0134122_11297360	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300011270\|Ga0137391_10445913	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300012199\|Ga0137383_11250713	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300012200\|Ga0137382_10783241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	686	Open in IMG/M
3300012211\|Ga0137377_11790549	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012582\|Ga0137358_10313520	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300012929\|Ga0137404_11260180	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300012930\|Ga0137407_12317115	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300012951\|Ga0164300_10865892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300012958\|Ga0164299_11659032	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300012960\|Ga0164301_10918309	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300012961\|Ga0164302_10150469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1370	Open in IMG/M
3300012961\|Ga0164302_10158927	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300012971\|Ga0126369_10313243	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300012971\|Ga0126369_12384678	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300012972\|Ga0134077_10596545	Not Available	500	Open in IMG/M
3300012985\|Ga0164308_12136683	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300012988\|Ga0164306_10249142	Not Available	1272	Open in IMG/M
3300012988\|Ga0164306_11665645	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300012989\|Ga0164305_11993454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	529	Open in IMG/M
3300013297\|Ga0157378_11295061	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300013306\|Ga0163162_11372593	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300013307\|Ga0157372_13300491	Not Available	514	Open in IMG/M
3300013308\|Ga0157375_11405180	Not Available	822	Open in IMG/M
3300014969\|Ga0157376_13025609	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300015197\|Ga0167638_1041852	Not Available	1020	Open in IMG/M
3300015200\|Ga0173480_10952202	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300015373\|Ga0132257_103921124	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300015374\|Ga0132255_103233396	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300016371\|Ga0182034_11843450	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300017792\|Ga0163161_10087346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2303	Open in IMG/M
3300018027\|Ga0184605_10034480	All Organisms → cellular organisms → Bacteria	2104	Open in IMG/M
3300018054\|Ga0184621_10369176	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300018061\|Ga0184619_10054204	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300018076\|Ga0184609_10158389	Not Available	1045	Open in IMG/M
3300018482\|Ga0066669_11105773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300019867\|Ga0193704_1058726	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300019881\|Ga0193707_1081077	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300020170\|Ga0179594_10227303	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300020581\|Ga0210399_11166783	Not Available	613	Open in IMG/M
3300021078\|Ga0210381_10061326	Not Available	1152	Open in IMG/M
3300021344\|Ga0193719_10123531	Not Available	1124	Open in IMG/M
3300021560\|Ga0126371_10587276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1263	Open in IMG/M
3300021560\|Ga0126371_10881588	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300022694\|Ga0222623_10060082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1466	Open in IMG/M
3300025899\|Ga0207642_11154906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300025912\|Ga0207707_11248924	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300025919\|Ga0207657_11428798	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300025921\|Ga0207652_11420137	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300025922\|Ga0207646_10372956	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300025927\|Ga0207687_10481657	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300025929\|Ga0207664_11307924	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300025932\|Ga0207690_11680745	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300025934\|Ga0207686_10506266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	938	Open in IMG/M
3300025934\|Ga0207686_10827768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300025939\|Ga0207665_10038070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3201	Open in IMG/M
3300025972\|Ga0207668_10068533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2523	Open in IMG/M
3300026023\|Ga0207677_11169264	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300026285\|Ga0209438_1071539	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300026514\|Ga0257168_1026144	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300028380\|Ga0268265_10678478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	993	Open in IMG/M
3300028708\|Ga0307295_10113428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	737	Open in IMG/M
3300028710\|Ga0307322_10009456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2138	Open in IMG/M
3300028713\|Ga0307303_10036735	Not Available	1002	Open in IMG/M
3300028715\|Ga0307313_10000017	All Organisms → cellular organisms → Bacteria	22317	Open in IMG/M
3300028718\|Ga0307307_10014100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2157	Open in IMG/M
3300028720\|Ga0307317_10022485	Not Available	1936	Open in IMG/M
3300028721\|Ga0307315_10004845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3271	Open in IMG/M
3300028744\|Ga0307318_10135065	Not Available	843	Open in IMG/M
3300028768\|Ga0307280_10114503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Paenarthrobacter → unclassified Paenarthrobacter → Paenarthrobacter sp. DKR-5	907	Open in IMG/M
3300028771\|Ga0307320_10149979	Not Available	901	Open in IMG/M
3300028778\|Ga0307288_10014812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2442	Open in IMG/M
3300028784\|Ga0307282_10609373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300028787\|Ga0307323_10079108	Not Available	1172	Open in IMG/M
3300028807\|Ga0307305_10003950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6212	Open in IMG/M
3300028810\|Ga0307294_10136888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300028811\|Ga0307292_10367233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	609	Open in IMG/M
3300028824\|Ga0307310_10047282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1786	Open in IMG/M
3300028878\|Ga0307278_10217262	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300028881\|Ga0307277_10005758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4765	Open in IMG/M
3300028881\|Ga0307277_10164806	Not Available	964	Open in IMG/M
3300028884\|Ga0307308_10497777	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300030904\|Ga0308198_1096218	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1009453	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300031170\|Ga0307498_10008333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1984	Open in IMG/M
3300031231\|Ga0170824_103576905	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031231\|Ga0170824_117674268	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300031421\|Ga0308194_10113832	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300031474\|Ga0170818_102473770	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031474\|Ga0170818_115213980	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031668\|Ga0318542_10257192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	889	Open in IMG/M
3300031679\|Ga0318561_10685934	Not Available	563	Open in IMG/M
3300031720\|Ga0307469_12480517	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031740\|Ga0307468_102386973	Not Available	516	Open in IMG/M
3300031764\|Ga0318535_10065448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1547	Open in IMG/M
3300031805\|Ga0318497_10452509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	719	Open in IMG/M
3300031819\|Ga0318568_10979309	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300031859\|Ga0318527_10164401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	934	Open in IMG/M
3300031890\|Ga0306925_11446152	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031896\|Ga0318551_10595434	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300031941\|Ga0310912_11266291	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300031947\|Ga0310909_10085229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2513	Open in IMG/M
3300032008\|Ga0318562_10548765	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300032010\|Ga0318569_10028524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2308	Open in IMG/M
3300032041\|Ga0318549_10146235	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300032060\|Ga0318505_10122799	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300033480\|Ga0316620_11573520	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300034176\|Ga0364931_0337254	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.23%
Host-Associated	Host-Associated	17.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.68%
Plants	Host-Associated → Plants	17.77%
Aquatic	Environmental → Aquatic	3.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.09%
Sediment	Environmental → Aquatic → Sediment	2.54%
Freshwater	Environmental → Aquatic → Freshwater	1.02%
Floodplain	Environmental → Terrestrial → Floodplain	0.51%
Roots	Host-Associated → Plants → Roots	0.51%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.38%
Loam	Environmental → Terrestrial → Soil → Loam	18.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.02%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.51%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.51%
Sand	Environmental → Terrestrial → Soil → Sand	0.51%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.51%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.51%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.51%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.02%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.51%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.51%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.51%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.51%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.51%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.52%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.02%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.02%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.02%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.02%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.51%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.51%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.51%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.51%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.51%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.51%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.51%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.51%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.51%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.51%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.51%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.51%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.51%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.51%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.51%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
N56_06839710	2170459012	Grass Soil	GTFELTILEATGIYKPFVGGNNHMLDHLHLPASGPPDEYCFCNISHP
JGI10213J12805_101476892	3300000858	Soil	EGTGIYRSVVGGHNHMVDRLHFLAPGDGSGGIDEYCFCFVSGP*
Ga0062593_1026460002	3300004114	Soil	ATGIYRPFVGGHNHMVDKLHFLAPGDGSGGFEEYCFCFISRP*
Ga0063356_1018573352	3300004463	Arabidopsis Thaliana Rhizosphere	LDVIEGTGIYRSVVGGHNHMVDRLHFLAPGDGSGGIDEFCFCFVSGP*
Ga0066812_10069503	3300005105	Soil	EGTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISGP*
Ga0066677_100934611	3300005171	Soil	EGTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGFDEYCFCFISGK*
Ga0066680_108388032	3300005174	Soil	GGQFLEGTFELTVLEATGIYRPFVGGHNHMVDKLHFLAPGDGSGGVEEYCFCFISDS*
Ga0066388_1004204704	3300005332	Tropical Forest Soil	TGIYKPFAGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISHP*
Ga0066388_1007021731	3300005332	Tropical Forest Soil	EGTFELTILEGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGLDEYCFCFISRQ*
Ga0070692_110492001	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	FLVGTFELTVTQATGIYRPFVGGHNHMVDRLHFLAPGDGSGGFEEYCFCFVSR*
Ga0070709_101280531	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	EGTFELTILDATGVYKPFVGGHNTMVDKLHFLAPGDGSGGLDEYCFCFISGP*
Ga0070709_102971712	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ*
Ga0070709_103024543	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISR*
Ga0070709_116001531	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ*
Ga0070709_117603581	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ*
Ga0070711_1003112402	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	TEELTILEATGIYRSFVGGHNHMVDKLHFLASGDIDEYCFCNISRP*
Ga0070708_1006681353	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GIYKPFVGGHNHMVDKLHFLAPGDGSGGLDEYCFCFISRQ*
Ga0070706_1013562311	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VLEATGSFRSFEGGHNHMVDRLHRLANGTFDEYCFCFISRA*
Ga0070707_1002734361	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	EEGTGIYRSFVGGHNHMVDHLHLLADGSADEYCFCFINRA*
Ga0070698_1002601833	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GTFELTILEGTGIYKRFAGGHNHMVDKLHFLAPGDGSGGFDEYCFCFISRP*
Ga0070698_1002946553	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	EGTGIYRSFVGGHNHMVDHLHLLADGSADEYCFCFISRA*
Ga0070698_1009909002	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	FELTVLEATGSFRSFEGGHNHMVDRLHRLANGTFDEYCFCFISRA*
Ga0070679_1017077502	3300005530	Corn Rhizosphere	VGTFELTVIDATGIYRPFVGGHNHMVDRLHFLAPGDGSGGFEEYCFCFVSR*
Ga0070697_1001160231	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	IEEGTGIYRSFVGGHNHMVDHLHLLADGSADEYCFCFISRA*
Ga0068853_1019157761	3300005539	Corn Rhizosphere	FLDGTFELAILEGTGIYRSFVGGHNHMVDHLHQRADGTFDEYCFCFISPA*
Ga0066661_109175652	3300005554	Soil	VGGHNHMVDRLHFLAPGDGSGGADEYCFCFISRP*
Ga0066707_105055883	3300005556	Soil	AGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRP*
Ga0070664_1018524891	3300005564	Corn Rhizosphere	ELTVLEGTGIYKPFAGGHNHMVDRLHFLAPGDGSGGVDEYCFCFISRP*
Ga0070664_1021492332	3300005564	Corn Rhizosphere	ATGTYRPFVGGHNHMVDKLHFLPPGDGSGGFDEYCFCFVSRP*
Ga0068856_1004435431	3300005614	Corn Rhizosphere	TEELTILEATGIYRSFVGGHNHMVDKLHFLPPGDGSGGIDEYCFCNISSP*
Ga0070702_1006114561	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ*
Ga0066903_1003775861	3300005764	Tropical Forest Soil	GTGIYKPFAGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRP*
Ga0066903_1014464031	3300005764	Tropical Forest Soil	EGTFELTILEGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRP*
Ga0066903_1035331532	3300005764	Tropical Forest Soil	PFAGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRP*
Ga0066903_1046078311	3300005764	Tropical Forest Soil	GTFELTILEGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGADEYCFCFISRP*
Ga0066903_1059830122	3300005764	Tropical Forest Soil	GIYKPFAGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRP*
Ga0066903_1064743071	3300005764	Tropical Forest Soil	FAGGHNHMVDKLHFLAPGDGSGGINEYCFCFISRR*
Ga0066903_1084401951	3300005764	Tropical Forest Soil	EGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGADEYCFCFISRP*
Ga0066651_104695883	3300006031	Soil	EATGTYRSFEGGHNHMEDRLHQLANGNFDEYCFCFISRR*
Ga0070716_1004162441	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ*
Ga0070712_1004778021	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EELTILEATGIYRSFVGGHNHMVDKLHFLASGDIDEYCFCNISRP*
Ga0070712_1015969181	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PFAGGHNHMVDHLHFLAPGDGSGGLDEYCFCFISRP*
Ga0097621_1009052241	3300006237	Miscanthus Rhizosphere	GQGGSFLEGTFELEVIEGTGNYRSLVGGHNHMVDKLHLLASGDADEYCFCFISGP*
Ga0079221_114666632	3300006804	Agricultural Soil	FELTILEGTGIYQSFVGGHNHMVDKLHQLANGSFDEYCFCFISRA*
Ga0075428_1016542043	3300006844	Populus Rhizosphere	YKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ*
Ga0075434_1009839253	3300006871	Populus Rhizosphere	LEGTFELTILEGTGIYKHFAGGHNHMIDKLHFLAPGDGSGGADEYCFCFISRP*
Ga0079217_108439911	3300006876	Agricultural Soil	GRFLEGTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRP*
Ga0079215_102204281	3300006894	Agricultural Soil	YQSLVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRP*
Ga0075436_1004653702	3300006914	Populus Rhizosphere	IYRSFVGGHNHMVDHLHLLADGSADEYCFCFISRA*
Ga0066709_1035983342	3300009137	Grasslands Soil	EGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGFDEYCFCFISGK*
Ga0114129_133968371	3300009147	Populus Rhizosphere	GTFELTIEEGTGIYRSFVGGHNHMVDHLHLLADGSADEYCFCFISRA*
Ga0111538_129914311	3300009156	Populus Rhizosphere	GIYQSFVGGHNHMVDRLHFLAPGDGSGGLDEYCFCFISRP*
Ga0105241_114840561	3300009174	Corn Rhizosphere	GRFLEGTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ*
Ga0105242_104689122	3300009176	Miscanthus Rhizosphere	TILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRR*
Ga0105242_111194611	3300009176	Miscanthus Rhizosphere	GGQFLVGTFELTVIDATGIYRPFVGGHNHMVDRLHFLAPGDGSGGFEEYCFCFVSR*
Ga0105249_125287402	3300009553	Switchgrass Rhizosphere	TFDLTVLEATGIYRSFVGGQNHMVDRLHFLPPGDGSGGFDEYCFCFISRP*
Ga0126374_109003371	3300009792	Tropical Forest Soil	LEGTFDLTILEGTGIYKPFAGGHNRMFDRLHFLAPGDGSGGVDEYCFCFISRQ*
Ga0126380_100736441	3300010043	Tropical Forest Soil	KPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ*
Ga0126382_124979981	3300010047	Tropical Forest Soil	IYKPFAGGHNHMVDKLHFLASGGVDEYCFCFISRQ*
Ga0127503_104882011	3300010154	Soil	GRFLEGTFELTILEATGIYRPFVGGHNHMVDKLHFLAPGDGSGGFEEYCFCFISHP*
Ga0134063_104199382	3300010335	Grasslands Soil	LEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ*
Ga0134063_104267802	3300010335	Grasslands Soil	YKPFVGGHNHMVDKLHFLAPGDGSGGADEYCFCVISRQ*
Ga0126376_116509392	3300010359	Tropical Forest Soil	IYKPFAGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ*
Ga0126372_100594191	3300010360	Tropical Forest Soil	GTGIYKPFAGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISHP*
Ga0126372_102071253	3300010360	Tropical Forest Soil	GQFLEGTFELTILEGTGIYKPFAGGHNHMVDKLHFLASGGVDEYCFCFISRR*
Ga0126378_104622864	3300010361	Tropical Forest Soil	VGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ*
Ga0126379_109965843	3300010366	Tropical Forest Soil	LEGTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ*
Ga0134125_112637132	3300010371	Terrestrial Soil	FLEGTFELTILEGTGIYKPFVGGHNHMVDRLHFLPPGDGSGGFDEYCFCFISRQ*
Ga0126381_1031160901	3300010376	Tropical Forest Soil	LTILEGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ*
Ga0126383_108372562	3300010398	Tropical Forest Soil	EGTFELTILEGTGIYKPFAGGHNHMVDKLHFLASGGVDEYCFCFISRH*
Ga0126383_126723901	3300010398	Tropical Forest Soil	TGIYKPFAGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ*
Ga0134127_132222941	3300010399	Terrestrial Soil	LTILEATGIYQSFVGGHNHMVDRLHFLAPGDGSGGLDEYCFCFISRS*
Ga0134122_112973601	3300010400	Terrestrial Soil	ELNVIQATGIYRPFVGGHNHMVDRLHFLAPGDGSGGFEEYCFCFVSR*
Ga0134122_124887481	3300010400	Terrestrial Soil	TGIYRSFVGGHNHMVDKLHFLASGDIDEYCFCNISRP*
Ga0137391_104459133	3300011270	Vadose Zone Soil	GNFLDGTFELTIEEGTGIYRSFIGGHNHMVNHLHLLADGSADEYCFCFISRA*
Ga0137388_113462963	3300012189	Vadose Zone Soil	FRSFEGGHNHMVDRLHQLANGTFDEYCFCFITRR*
Ga0137383_112507131	3300012199	Vadose Zone Soil	GYYLEGTFELAILEATRAYRAFQGGHNHMVDKLHFLAPGDGSGGFDEYCFCFVSRP*
Ga0137382_107832412	3300012200	Vadose Zone Soil	GQYDEGFLPLTILEATGVYRAFAGGHNHMVDKLHFLAPGDGSGGADEYCFCFISRP*
Ga0137377_117905491	3300012211	Vadose Zone Soil	LTILEATGIYRSFEGGHNHIVDRLHPRADGSFDEYRFCFISRH*
Ga0137358_103135202	3300012582	Vadose Zone Soil	FELTILEGTGIYRSFTGGHNHMVDKLHFLAPGDGSGGLDEYCFCFISRS*
Ga0137404_112601801	3300012929	Vadose Zone Soil	LTVLEATGIYRSFVGGHNHMVDKLHFLAPGDGSGGLDEYCFCFISRA*
Ga0137407_123171152	3300012930	Vadose Zone Soil	GGQFLEGTFELTVLEGTGIYKPFAGGHNHMVDRLHFLAPGDGSGGFDEYCFCFITRP*
Ga0164300_108658921	3300012951	Soil	QATGVYRSFVGGHNHMVDKLHFLAPGDGSGGFEEYCFCFVSR*
Ga0164299_116590321	3300012958	Soil	GTWELTILEGTGIYKPFVGGHNHMVDRLHFLAPGDGSGGADEYCFCFISRR*
Ga0164301_109183091	3300012960	Soil	GVYRSFVGGHNHMVDKLHFLPPGDGSGGLDEYCFCFISGP*
Ga0164302_101504691	3300012961	Soil	TGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFINRQ*
Ga0164302_101589271	3300012961	Soil	FLEGTFELTILEGTGIYKPFVGGHNHMFDKLHFLAPGDGSGGVDEYCFCFISRQ*
Ga0126369_103132431	3300012971	Tropical Forest Soil	GTGIYKPFAGGHNHMVDKLHFLAPGDGSGGVDKYCFCFISRP*
Ga0126369_108908951	3300012971	Tropical Forest Soil	ATGIYRSFVGGHNHMVDKLHFLASGDIDEYCFCHISRP*
Ga0126369_123846781	3300012971	Tropical Forest Soil	EGTGIYKPFAGGHNHMVDKLHFLAPGDGSNGVDEYCFCFISRP*
Ga0134077_105965451	3300012972	Grasslands Soil	VGGQNHMVDKLHFLAPGDGSGGRDEYCFCFISRP*
Ga0164308_121366831	3300012985	Soil	GTWELTILEGTGIYKPFAGGHNHMVDRLHFLAPGDGSGGLDEYCFCFISRQ*
Ga0164306_102491421	3300012988	Soil	FLEGTFELDVLEGTGVYRPFVGGHNHMVDKLHFLPPGDGSGGVDEYCFCFISRQ*
Ga0164306_116656452	3300012988	Soil	YKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFINRQ*
Ga0164305_119934541	3300012989	Soil	GTFELTVLEGTGIYRRFVGGHNHMVDKLHFLAPGDGSGGFEEYCFCFVTAP*
Ga0157378_112950612	3300013297	Miscanthus Rhizosphere	VYKPFVGGHNHMVDKLHFLAPGDGSGGLDEYCFCFISGP*
Ga0163162_113725931	3300013306	Switchgrass Rhizosphere	EGTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ*
Ga0163162_117927131	3300013306	Switchgrass Rhizosphere	TILEATGIYHSFVGGHNHMVDKLHQLANGSFDEYCFCFISRA*
Ga0157372_133004911	3300013307	Corn Rhizosphere	PFVAGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ*
Ga0157375_114051801	3300013308	Miscanthus Rhizosphere	VGGHNHMVDRLHFLAPGDGSGGLDEYCFCFISRP*
Ga0157376_130256091	3300014969	Miscanthus Rhizosphere	YKPFVGGHNHMVDKLHFLAPGDGSGGLDEYCFCFISRQ*
Ga0167638_10418522	3300015197	Glacier Forefield Soil	ILEATGWYRDFAGGHNHMQDRLQFLAPGDGSGGAVEHCLCNISKP*
Ga0173480_109522021	3300015200	Soil	WVQYDEGTLPLTILEATGIYSAFAGGHNHMVDKLHFLANGSLDEHCFCIISH*
Ga0132257_1039211241	3300015373	Arabidopsis Rhizosphere	ELTILEATGIYRSFVGGHNHMVDKLHYLPPGDGSGGIDEYCFCFISSP*
Ga0132255_1032333961	3300015374	Arabidopsis Rhizosphere	LDVLEGTGIYRSLAGGHNHMVDRLHFLANGAVDEYCFCFVSGP*
Ga0182034_118434502	3300016371	Soil	GTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRP
Ga0163161_100873463	3300017792	Switchgrass Rhizosphere	TILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISR
Ga0184605_100344801	3300018027	Groundwater Sediment	KRFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISGQ
Ga0184621_103691762	3300018054	Groundwater Sediment	YLEGTFELTILEANGIYRSFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISSP
Ga0184619_100542041	3300018061	Groundwater Sediment	TILEGTGIYKPFVGGHNHMVDKLHFLASGGVDEYCFCFITRQ
Ga0184609_101583892	3300018076	Groundwater Sediment	PFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ
Ga0066669_111057731	3300018482	Grasslands Soil	FELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFITGQ
Ga0193704_10587262	3300019867	Soil	ELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ
Ga0193707_10810772	3300019881	Soil	TILEATGIYQPFEGGHNHMVDKLHFLAPGDGSGGIDEYCFCFVSRA
Ga0179594_102273031	3300020170	Vadose Zone Soil	EATGIYRSFVGGHNHMVDKLHFLAPGDGSGGLDEYCFCFISRA
Ga0210399_111667832	3300020581	Soil	YRSFVAGHNHMVDKLHFLPPGDGSGGIDEYCFCFISSP
Ga0210381_100613261	3300021078	Groundwater Sediment	LEGTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ
Ga0210408_102899921	3300021178	Soil	LEATGKFRPFEGGHNHMVDRLHRLANGTFDEYCFCFISRA
Ga0193719_101235312	3300021344	Soil	RFLEGTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ
Ga0210402_108552442	3300021478	Soil	ILEATGIYRSFQGGHNHMVDRLHRLANGSFDEYCFCFISRR
Ga0126371_105872762	3300021560	Tropical Forest Soil	EGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGIDEYCFCFIRRP
Ga0126371_108815882	3300021560	Tropical Forest Soil	FLEGTFELTILEGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGLDEYCFCFIRRR
Ga0242660_11879541	3300022531	Soil	VLEATGKFRPFEGGHNHMVDRLHRLANGTFDEYCFCFISRA
Ga0222623_100600823	3300022694	Groundwater Sediment	FLEGTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ
Ga0207642_111549062	3300025899	Miscanthus Rhizosphere	TGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRR
Ga0207684_110595132	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ELTIEEGTGIYRSFIGGHNHMVDHLHLLADGSADEYCFCFISRA
Ga0207684_111842221	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	EATGSFRSFEGGHNHMVDRLHRLANGTFDEYCFCFISRA
Ga0207707_112489241	3300025912	Corn Rhizosphere	LTVIDATGIYRPFVGGHNHMVDRLHFLAPGDGSGGVEEYCFCFVSR
Ga0207657_114287981	3300025919	Corn Rhizosphere	TILEATGIYQQFVGGHNHMVDRLHLLAPGDGSGGFDEDCFCFVSRP
Ga0207652_114201371	3300025921	Corn Rhizosphere	TEELTILEATGIYRSFVGGHNHMVDKLHFLASGDIDEYCFCNISRP
Ga0207646_100312408	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FLIGTFELTILEATGIYQSFVGGHNHMVDKLHQLANGSFDEYCFCFINRA
Ga0207646_103729561	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	IEEGTGIYRSFVGGHNHMVDHLHLLADGSADEYCFCFINRA
Ga0207687_104816572	3300025927	Miscanthus Rhizosphere	ILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ
Ga0207687_109727731	3300025927	Miscanthus Rhizosphere	TGIYHSFVGGHNHMVDKLHQLANGSFDEYCFCFISRA
Ga0207664_113079241	3300025929	Agricultural Soil	TFELPILEGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGLDEYCFCFISRQ
Ga0207690_116807451	3300025932	Corn Rhizosphere	MTILDATGVYKPFVGGHNTMVDKLHFLAPGDGSGGLDEYCFCFISGP
Ga0207686_105062663	3300025934	Miscanthus Rhizosphere	DGTFELTILEGTGIYKPFAGGHNHMVDHLHFLAPGDGSGGLDEYCFCFISRP
Ga0207686_108277681	3300025934	Miscanthus Rhizosphere	TILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRR
Ga0207665_100380701	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ
Ga0207668_100685331	3300025972	Switchgrass Rhizosphere	GTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISR
Ga0207677_111692641	3300026023	Miscanthus Rhizosphere	ILEGTGIFKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFVSRQ
Ga0207683_114679312	3300026121	Miscanthus Rhizosphere	FAGGHNHMVDKLHFLAPGDGSGGADEYCFCFISRH
Ga0209438_10715391	3300026285	Grasslands Soil	GTFELTIEEGTGIYRSFVGGHNHMVDHLHLLADGSADEYCFCFISRA
Ga0257168_10261441	3300026514	Soil	LGGNFLDGTFELTIEEGTGIYRSFVGGHNHMVDHLHLLADGSADEYCFCFISRA
Ga0268265_106784782	3300028380	Switchgrass Rhizosphere	LKLRWEGTGIYKPFVGGHNHMVDKRHFLAPGDGSGGVDEYCFCFISR
Ga0307295_101134282	3300028708	Soil	QFLEGTFELTIIQATGIYRPFVGGHNHMVDKLHFQASGDVVEYCFCFISRP
Ga0307322_100094561	3300028710	Soil	LEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISGQ
Ga0307303_100367352	3300028713	Soil	EPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ
Ga0307313_1000001723	3300028715	Soil	RFLEGTFELTILEGTGIYEPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ
Ga0307307_100141003	3300028718	Soil	EGTGIYKRFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISGQ
Ga0307317_100224854	3300028720	Soil	EGTFELTILEGTGIYKPFVGGHNHMVDKLHFLASGGVDEYCFCFISRQ
Ga0307315_100048454	3300028721	Soil	ELTILEGTGIYEPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ
Ga0307318_101350652	3300028744	Soil	GRFLEGTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ
Ga0307280_101145031	3300028768	Soil	LEGTGIYKPFVGGHNHMVDKLHFLASGGVDEYCFCFISRQ
Ga0307320_101499791	3300028771	Soil	TFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ
Ga0307288_100148124	3300028778	Soil	FELTILEGTGIYEPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ
Ga0307282_106093732	3300028784	Soil	LEGTFELTILEGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ
Ga0307323_100791081	3300028787	Soil	RFLEGTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ
Ga0307281_102025891	3300028803	Soil	LTILEATGIYQSFVGGHNHMVDKLHQLANGSFDEYCFCFISRP
Ga0307305_100039501	3300028807	Soil	GTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ
Ga0307294_101368881	3300028810	Soil	FVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISGQ
Ga0307292_103672331	3300028811	Soil	IIQATGIYRPFVGGHNHMVDKLHFQASGDVVEYCFCFISRP
Ga0307310_100472821	3300028824	Soil	IYKPFVGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ
Ga0307278_102172621	3300028878	Soil	GGRFLEGTFELTVLEATGIYSPFVGGHNHMVDKLHFLAPGDGSGGVEEYCFCFVSQP
Ga0307277_100057581	3300028881	Soil	FLEGTFELTILEATGIYKPFVGGHNHMVDKLHFLASGGVDEYCFCFITRQ
Ga0307277_101648062	3300028881	Soil	LEGTGIYEPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ
Ga0307308_104977772	3300028884	Soil	GLGGNFLEGTFELTILEATGVYRSFVGGHNHMVDRLHLLGSGGADEYCFCFISRP
Ga0308198_10962181	3300030904	Soil	IDGTYELNVLEATGRFRYLRGGHNHMVDKLHFLASGGVDEYCFCFISHP
(restricted) Ga0255311_10094531	3300031150	Sandy Soil	ILEATGIFKSFEGGQNHMVDRLHFLAPGDGSGGLDEFCFCFISRP
Ga0307498_100083333	3300031170	Soil	GIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISS
Ga0170824_1035769051	3300031231	Forest Soil	LEGTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ
Ga0170824_1176742681	3300031231	Forest Soil	LEGTFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGLDEYCFCFISRQ
Ga0308194_101138321	3300031421	Soil	AILQATGIYRSFVGGHNHMVDKLHFLAPGDGSGGAVEYCFCFISRP
Ga0170818_1024737701	3300031474	Forest Soil	LEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGLDEYCFCFISRQ
Ga0170818_1152139801	3300031474	Forest Soil	FLEGTFELTILEGTGIYKAFAGGHNHMVDRLHFLAPGDGSGGADEHCFCFISRP
Ga0318542_102571922	3300031668	Soil	FLEGTFELTILEGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ
Ga0318561_106859342	3300031679	Soil	PFVGGHNHMVDKLRFLAPVEGSGGTDEYCFCFISHS
Ga0307469_122685561	3300031720	Hardwood Forest Soil	IEEGTGIYRSFVGGHNHMVDHLHLLADGSADEYCFCFISRA
Ga0307469_124805171	3300031720	Hardwood Forest Soil	LIGTYELTILEATGIYRSFEGGHNHMVDRLHLLTPGDGTGGADEYCFCFINRP
Ga0307468_1023869732	3300031740	Hardwood Forest Soil	FLVGTFELNVIEATGIYRPFVGGHNHMVDRLHFLAPGDGSGGFEEYCFCFVSR
Ga0318535_100654481	3300031764	Soil	TGIYKPFAGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ
Ga0318497_104525092	3300031805	Soil	ELTILEATGIYRSFVGGYNHMVDKLHFLPPGDGSGGLDEYCFCNISSP
Ga0318568_109793092	3300031819	Soil	TILEGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRP
Ga0307473_114339541	3300031820	Hardwood Forest Soil	LTILEGTGIYQSFVGGHNHMVDKLHQLANGSFDEYCFCFISRA
Ga0318527_101644012	3300031859	Soil	FLEGTFELTILEGTGIYKPFAGGHNHMVDKLHLLAPGDGSGGADEYCFCFISRP
Ga0306925_114461522	3300031890	Soil	LEGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRQ
Ga0318551_105954342	3300031896	Soil	TFELTILEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRP
Ga0310912_112662911	3300031941	Soil	EGTGIYKPFAGGHNHMVDKLHLLAPGDGSGGADEYCFCFISRP
Ga0310909_100852291	3300031947	Soil	GTFLEGTFELTILEGTGIYKPFAGGHNHMVDKLHLLAPGDGSGGADEYCFCFISRP
Ga0318562_105487652	3300032008	Soil	PFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRP
Ga0318569_100285242	3300032010	Soil	EGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ
Ga0318549_101462352	3300032041	Soil	ELTILEGTGIYKPFAGGHNHMVDKLHFLAPGDGSGGIDEYCFCFISRQ
Ga0318558_100922713	3300032044	Soil	PSFAGGHNHMVDKLHFLPPGDGSGGLDEYCFCNISSP
Ga0318505_101227991	3300032060	Soil	LEGTGIYKPFVGGHNHMVDKLHFLAPGDGSGGVDEYCFCFISRP
Ga0318525_102884301	3300032089	Soil	TEELTILEATGIYRCFVGGHNHMVDKLHFLPPGDGSGGIDEYCFCNISRP
Ga0316620_115735201	3300033480	Soil	DGTFELTIEEGTGIYQSFVGGHNHMVDHLHLLADGSADEYCFCQISRA
Ga0364931_0337254_371_502	3300034176	Sediment	LTILEATGIYRPFVGGHNHMVDRLHFLVSGDVDEYCFCFISRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters