Metagenome / Metatranscriptome Family F025784

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F025784
Family Type	Metagenome / Metatranscriptome
Number of Sequences	200
Average Sequence Length	74 residues
Representative Sequence	MDTLTISLKHVGSQREQPCAVCGASFVPAEDSGSRVLSLQAPAQEAFGGLMCGGCYSKWSHGATITIRANAAR
Number of Associated Samples	135
Number of Associated Scaffolds	200

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.75 %
% of genes near scaffold ends (potentially truncated)	28.00 %
% of genes from short scaffolds (< 2000 bps)	85.00 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.500 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.88% β-sheet: 20.79% Coil/Unstructured: 67.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 200 Family Scaffolds
PF13620	CarboxypepD_reg	3.00
PF00072	Response_reg	3.00
PF12773	DZR	2.50
PF07366	SnoaL	2.50
PF02518	HATPase_c	2.00
PF13439	Glyco_transf_4	1.50
PF12704	MacB_PCD	1.50
PF12840	HTH_20	1.50
PF07593	UnbV_ASPIC	1.50
PF08241	Methyltransf_11	1.00
PF00884	Sulfatase	1.00
PF03880	DbpA	1.00
PF02810	SEC-C	1.00
PF00313	CSD	1.00
PF13517	FG-GAP_3	1.00
PF05163	DinB	1.00
PF00069	Pkinase	1.00
PF00722	Glyco_hydro_16	0.50
PF00300	His_Phos_1	0.50
PF00076	RRM_1	0.50
PF11781	zf-RRN7	0.50
PF00158	Sigma54_activat	0.50
PF10137	TIR-like	0.50
PF14272	Gly_rich_SFCGS	0.50
PF08002	DUF1697	0.50
PF14534	DUF4440	0.50
PF02868	Peptidase_M4_C	0.50
PF08240	ADH_N	0.50
PF00291	PALP	0.50
PF13366	PDDEXK_3	0.50
PF12697	Abhydrolase_6	0.50
PF03699	UPF0182	0.50
PF00171	Aldedh	0.50
PF05960	DUF885	0.50
PF03807	F420_oxidored	0.50
PF06439	3keto-disac_hyd	0.50
PF07394	DUF1501	0.50
PF12412	DUF3667	0.50
PF13579	Glyco_trans_4_4	0.50
PF00106	adh_short	0.50
PF13568	OMP_b-brl_2	0.50
PF17164	DUF5122	0.50
PF06736	TMEM175	0.50
PF01523	PmbA_TldD	0.50
PF13493	DUF4118	0.50
PF00155	Aminotran_1_2	0.50
PF13425	O-antigen_lig	0.50
PF00440	TetR_N	0.50
PF04542	Sigma70_r2	0.50
PF04203	Sortase	0.50
PF13545	HTH_Crp_2	0.50
PF00118	Cpn60_TCP1	0.50
PF00535	Glycos_transf_2	0.50
PF04032	Rpr2	0.50
PF07504	FTP	0.50
PF08327	AHSA1	0.50
PF07585	BBP7	0.50
PF07110	EthD	0.50
PF01075	Glyco_transf_9	0.50

COG ID	Name	Functional Category	% Frequency in 200 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	4.00
COG0513	Superfamily II DNA and RNA helicase	Replication, recombination and repair [L]	3.00
COG3227	Zn-dependent metalloprotease (Neutral protease B)	Posttranslational modification, protein turnover, chaperones [O]	1.00
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.00
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	0.50
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.50
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.50
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.50
COG3797	Uncharacterized conserved protein, DUF1697 family	Function unknown [S]	0.50
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.50
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.50
COG2273	Beta-glucanase, GH16 family	Carbohydrate transport and metabolism [G]	0.50
COG2023	Ribonuclease P protein subunit RPR2	Translation, ribosomal structure and biogenesis [J]	0.50
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.50
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.50
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.50
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.50
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.50
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.50
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.50
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.50

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.00 %
Unclassified	root	N/A	10.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.50 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.50 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	46.50 %
Unclassified	root	N/A	10.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.50 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.50 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.50 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.50 %
Unclassified	root	N/A	10.00 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.50 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.50 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.50 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.50 %
Unclassified	root	N/A	10.00 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.50 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.50 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.50 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.50 %
Unclassified	root	N/A	10.00 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.50 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.50 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.50 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.50 %
Unclassified	root	N/A	10.00 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.50 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.50 %
Candidatus Nitrospira nitrosa	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	0.50 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.50 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_104219	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
2228664021\|ICCgaii200_c0853247	All Organisms → cellular organisms → Bacteria → Acidobacteria	1015	Open in IMG/M
3300000550\|F24TB_12072649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954	Open in IMG/M
3300000550\|F24TB_12974123	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300000890\|JGI11643J12802_10773384	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300000956\|JGI10216J12902_101082816	All Organisms → cellular organisms → Bacteria	4693	Open in IMG/M
3300000956\|JGI10216J12902_101407259	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300000956\|JGI10216J12902_101550788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1339	Open in IMG/M
3300000956\|JGI10216J12902_102012290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1210	Open in IMG/M
3300000956\|JGI10216J12902_103237250	All Organisms → cellular organisms → Bacteria	3285	Open in IMG/M
3300000956\|JGI10216J12902_103840465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300000956\|JGI10216J12902_104749541	All Organisms → cellular organisms → Bacteria	3015	Open in IMG/M
3300000956\|JGI10216J12902_104882363	Not Available	1256	Open in IMG/M
3300000956\|JGI10216J12902_119139056	All Organisms → cellular organisms → Bacteria → Acidobacteria	1381	Open in IMG/M
3300002568\|C688J35102_119911563	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300002568\|C688J35102_120843401	All Organisms → cellular organisms → Bacteria → Proteobacteria	1783	Open in IMG/M
3300003693\|Ga0032354_1114315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300004114\|Ga0062593_100490635	All Organisms → cellular organisms → Bacteria → Acidobacteria	1135	Open in IMG/M
3300004114\|Ga0062593_101092137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	827	Open in IMG/M
3300004114\|Ga0062593_101685532	All Organisms → cellular organisms → Bacteria → PVC group	692	Open in IMG/M
3300004114\|Ga0062593_102805169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300004463\|Ga0063356_100100742	All Organisms → cellular organisms → Bacteria → Acidobacteria	3132	Open in IMG/M
3300004463\|Ga0063356_100135839	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2767	Open in IMG/M
3300004463\|Ga0063356_100734406	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300004463\|Ga0063356_102416752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300004479\|Ga0062595_100193875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1247	Open in IMG/M
3300004480\|Ga0062592_101693463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300004643\|Ga0062591_100579827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	986	Open in IMG/M
3300004643\|Ga0062591_102214252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300004798\|Ga0058859_11044599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300004798\|Ga0058859_11353156	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300005187\|Ga0066675_11087150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300005288\|Ga0065714_10318615	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005290\|Ga0065712_10017744	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300005293\|Ga0065715_10104845	All Organisms → cellular organisms → Bacteria	2932	Open in IMG/M
3300005293\|Ga0065715_10166307	All Organisms → cellular organisms → Bacteria → Proteobacteria	1584	Open in IMG/M
3300005293\|Ga0065715_10939253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300005293\|Ga0065715_11142609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300005294\|Ga0065705_10304776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300005329\|Ga0070683_100007142	All Organisms → cellular organisms → Bacteria	9411	Open in IMG/M
3300005331\|Ga0070670_100246590	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300005354\|Ga0070675_100233563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1605	Open in IMG/M
3300005356\|Ga0070674_100704662	All Organisms → cellular organisms → Bacteria → Acidobacteria	863	Open in IMG/M
3300005356\|Ga0070674_102057074	Not Available	520	Open in IMG/M
3300005366\|Ga0070659_100136421	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300005366\|Ga0070659_100825555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300005438\|Ga0070701_10681523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300005439\|Ga0070711_101642659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300005444\|Ga0070694_101552973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300005526\|Ga0073909_10589661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300005543\|Ga0070672_101558245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300005833\|Ga0074472_10929149	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300005885\|Ga0075284_1010894	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300005891\|Ga0075283_1096339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300006049\|Ga0075417_10234089	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300006051\|Ga0075364_10008680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6077	Open in IMG/M
3300006178\|Ga0075367_10295903	All Organisms → cellular organisms → Bacteria → Acidobacteria	1019	Open in IMG/M
3300006195\|Ga0075366_11049304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300006237\|Ga0097621_100802417	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300006844\|Ga0075428_101322949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300006845\|Ga0075421_100104311	Not Available	3566	Open in IMG/M
3300006845\|Ga0075421_100194556	All Organisms → cellular organisms → Bacteria	2514	Open in IMG/M
3300006845\|Ga0075421_100317166	All Organisms → cellular organisms → Bacteria → Acidobacteria	1891	Open in IMG/M
3300006845\|Ga0075421_100382158	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300006846\|Ga0075430_100163592	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300006846\|Ga0075430_101499546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300006847\|Ga0075431_101137136	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300006847\|Ga0075431_101170846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300006847\|Ga0075431_102018911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300006853\|Ga0075420_100350100	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300006854\|Ga0075425_100009602	All Organisms → cellular organisms → Bacteria	10302	Open in IMG/M
3300006854\|Ga0075425_100703834	Not Available	1160	Open in IMG/M
3300006871\|Ga0075434_100760133	Not Available	986	Open in IMG/M
3300006914\|Ga0075436_100450674	All Organisms → cellular organisms → Bacteria → Acidobacteria	937	Open in IMG/M
3300006918\|Ga0079216_10610752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300006918\|Ga0079216_11263749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300006954\|Ga0079219_10451341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300007076\|Ga0075435_100634412	Not Available	927	Open in IMG/M
3300009094\|Ga0111539_11280922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300009100\|Ga0075418_10416510	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300009148\|Ga0105243_11898005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300009148\|Ga0105243_12134939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300009156\|Ga0111538_11878280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300009156\|Ga0111538_13348462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300009176\|Ga0105242_12817058	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300009553\|Ga0105249_13428814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300009609\|Ga0105347_1005761	All Organisms → cellular organisms → Bacteria	4461	Open in IMG/M
3300009789\|Ga0126307_10909006	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300010036\|Ga0126305_10462932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300010036\|Ga0126305_11286905	Not Available	505	Open in IMG/M
3300010037\|Ga0126304_10061661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2301	Open in IMG/M
3300010038\|Ga0126315_10825685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300010045\|Ga0126311_10485102	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300010396\|Ga0134126_10957161	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300010397\|Ga0134124_11701832	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300010400\|Ga0134122_12770225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300010401\|Ga0134121_11079517	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300010403\|Ga0134123_10187359	All Organisms → cellular organisms → Bacteria → Acidobacteria	1749	Open in IMG/M
3300010403\|Ga0134123_10883848	All Organisms → cellular organisms → Bacteria → Acidobacteria	897	Open in IMG/M
3300011429\|Ga0137455_1158652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300011439\|Ga0137432_1228230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300012212\|Ga0150985_108923216	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300012228\|Ga0137459_1186645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300012360\|Ga0137375_10189003	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300012469\|Ga0150984_115280866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300012469\|Ga0150984_122516792	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300012897\|Ga0157285_10283499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012939\|Ga0162650_100002246	Not Available	1975	Open in IMG/M
3300012951\|Ga0164300_10110925	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300012955\|Ga0164298_10392057	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300012957\|Ga0164303_11289776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300012958\|Ga0164299_10858928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300012961\|Ga0164302_10323871	Not Available	1018	Open in IMG/M
3300012961\|Ga0164302_11079551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300012985\|Ga0164308_11831840	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300012986\|Ga0164304_10582078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300014268\|Ga0075309_1073755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300014272\|Ga0075327_1000928	All Organisms → cellular organisms → Bacteria → Acidobacteria	8655	Open in IMG/M
3300014326\|Ga0157380_11516894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300015200\|Ga0173480_10610353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300015371\|Ga0132258_10011420	All Organisms → cellular organisms → Bacteria	18590	Open in IMG/M
3300015371\|Ga0132258_11643379	Not Available	1621	Open in IMG/M
3300015371\|Ga0132258_11738791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1572	Open in IMG/M
3300015371\|Ga0132258_12096466	Not Available	1421	Open in IMG/M
3300015371\|Ga0132258_13985319	All Organisms → cellular organisms → Bacteria → Proteobacteria	1002	Open in IMG/M
3300015373\|Ga0132257_100066693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4058	Open in IMG/M
3300015373\|Ga0132257_100559901	All Organisms → cellular organisms → Bacteria → Acidobacteria	1409	Open in IMG/M
3300015373\|Ga0132257_103439676	Not Available	576	Open in IMG/M
3300015374\|Ga0132255_103378374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300018067\|Ga0184611_1010533	All Organisms → cellular organisms → Bacteria	2624	Open in IMG/M
3300018073\|Ga0184624_10085205	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300018078\|Ga0184612_10033700	All Organisms → cellular organisms → Bacteria → Proteobacteria	2651	Open in IMG/M
3300018084\|Ga0184629_10207170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300018422\|Ga0190265_10027633	Not Available	4654	Open in IMG/M
3300018422\|Ga0190265_10225011	All Organisms → cellular organisms → Bacteria → Acidobacteria	1907	Open in IMG/M
3300018422\|Ga0190265_11394991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300018422\|Ga0190265_12547297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300018429\|Ga0190272_10240809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1348	Open in IMG/M
3300018432\|Ga0190275_10959900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300018469\|Ga0190270_10435250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1227	Open in IMG/M
3300018469\|Ga0190270_10691725	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1010	Open in IMG/M
3300018469\|Ga0190270_12327642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300018476\|Ga0190274_10717097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
3300018476\|Ga0190274_13996097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300019377\|Ga0190264_10076395	Not Available	1472	Open in IMG/M
3300025912\|Ga0207707_11415789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300025921\|Ga0207652_10512380	All Organisms → cellular organisms → Bacteria → Acidobacteria	1080	Open in IMG/M
3300025921\|Ga0207652_11360836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300025930\|Ga0207701_10020594	All Organisms → cellular organisms → Bacteria → Acidobacteria	6321	Open in IMG/M
3300025930\|Ga0207701_10109304	All Organisms → cellular organisms → Bacteria	2474	Open in IMG/M
3300025933\|Ga0207706_10469649	Not Available	1087	Open in IMG/M
3300025933\|Ga0207706_10475366	All Organisms → cellular organisms → Bacteria → Acidobacteria	1080	Open in IMG/M
3300025934\|Ga0207686_11610269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300025937\|Ga0207669_11601406	Not Available	556	Open in IMG/M
3300025940\|Ga0207691_11142383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300025944\|Ga0207661_11408736	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300026035\|Ga0207703_10614784	All Organisms → cellular organisms → Bacteria → Acidobacteria	1029	Open in IMG/M
3300026075\|Ga0207708_11498885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300026535\|Ga0256867_10047225	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300027821\|Ga0209811_10317372	Not Available	601	Open in IMG/M
3300027866\|Ga0209813_10058094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1228	Open in IMG/M
3300027873\|Ga0209814_10359365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300027873\|Ga0209814_10552211	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300027886\|Ga0209486_10648278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300027909\|Ga0209382_10095044	All Organisms → cellular organisms → Bacteria	3497	Open in IMG/M
3300027909\|Ga0209382_10488642	All Organisms → cellular organisms → Bacteria → Acidobacteria	1357	Open in IMG/M
3300027909\|Ga0209382_10830484	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300027909\|Ga0209382_11031011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300027909\|Ga0209382_11201845	Not Available	775	Open in IMG/M
3300027909\|Ga0209382_11766960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300030006\|Ga0299907_10106408	All Organisms → cellular organisms → Bacteria	2303	Open in IMG/M
3300030635\|Ga0247627_10146187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300031547\|Ga0310887_10219186	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1045	Open in IMG/M
3300031548\|Ga0307408_100636498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300031548\|Ga0307408_100797082	Not Available	857	Open in IMG/M
3300031716\|Ga0310813_10010786	All Organisms → cellular organisms → Bacteria	5897	Open in IMG/M
3300031731\|Ga0307405_10275301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1264	Open in IMG/M
3300031847\|Ga0310907_10305649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300031847\|Ga0310907_10710287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300031892\|Ga0310893_10303227	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300031908\|Ga0310900_10084930	All Organisms → cellular organisms → Bacteria	1984	Open in IMG/M
3300031908\|Ga0310900_11050081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300031940\|Ga0310901_10055963	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300031940\|Ga0310901_10243480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300031944\|Ga0310884_10495105	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	717	Open in IMG/M
3300031995\|Ga0307409_100089968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2511	Open in IMG/M
3300032000\|Ga0310903_10634344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300032012\|Ga0310902_10246846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300032013\|Ga0310906_10046154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2112	Open in IMG/M
3300032017\|Ga0310899_10703030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300032075\|Ga0310890_10023896	All Organisms → cellular organisms → Bacteria	3182	Open in IMG/M
3300032075\|Ga0310890_10612043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300032122\|Ga0310895_10223114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300032179\|Ga0310889_10360656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300032179\|Ga0310889_10430446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300032211\|Ga0310896_10156580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1085	Open in IMG/M
3300033412\|Ga0310810_10428866	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300033412\|Ga0310810_11357106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300034147\|Ga0364925_0010743	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	2779	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.00%
Host-Associated	Host-Associated	41.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.00%
Plants	Host-Associated → Plants	40.00%
Aquatic	Environmental → Aquatic	5.00%
Human	Host-Associated → Human	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.00%
Sediment	Environmental → Aquatic → Sediment	4.50%
Roots	Host-Associated → Plants → Roots	2.50%
Digestive System	Host-Associated → Human → Digestive System	1.00%
Marine	Environmental → Aquatic → Marine	0.50%
Floodplain	Environmental → Terrestrial → Floodplain	0.50%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.00%
Loam	Environmental → Terrestrial → Soil → Loam	6.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.00%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.00%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.00%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.50%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.50%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.50%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.00%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.00%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.00%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.50%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.50%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.50%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.50%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.00%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.00%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.50%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.00%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.00%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.00%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.00%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.00%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.00%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.00%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.50%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.50%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.50%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.50%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.50%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003693	Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005885	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401	Environmental	Open in IMG/M
3300005891	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_304	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030635	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0015.00002290	2162886012	Miscanthus Rhizosphere	MESLTVSLKHIASAREQPCGVCGANFVPAEDAGSRVLSIRPAGEEPLGALMCGGCHSKWTHGQAMTLRPRRASGVPTG
ICCgaii200_08532473	2228664021	Soil	IVSLKHVASQRNQPCAVCGALFVPAEDAGSRVLSIKAPDQEAVGGLMCGGCCSKWSHGAAVTLRPSAAA
F24TB_120726492	3300000550	Soil	MDTLTISLRHVASERNQPCAVCAALFVPAEDSGSRVLSIKTPAQEAFGGLMCGGCYSKWSHGASIVIRANAAR*
F24TB_129741232	3300000550	Soil	MTSVTVSLVHERSDREQACAICRAPFAPSEDSGSRLLSIHAHDQEPFSALMCGGCYSKWSHGIVKLQGTSTPRQ*
JGI11643J12802_107733842	3300000890	Soil	VQSETAFAKVTAVPLGMKDVTISVRHLASPRNQPCAVCNALFVPAEDSGSRVFSMKALEQDVFEALLCGGCYSKWSHGMTV
JGI10216J12902_1010828164	3300000956	Soil	MTTLIVSVKHVASNREQPCAVCRSPFVPSEDAGSRVLSLKAPAQEPLGALMCGGCYSKWSHGTPVELRVSPAG*
JGI10216J12902_1014072592	3300000956	Soil	MTLTLSVKHVPSDREQPCAVCGAAFASSEDSGSRVFSMKAPDQDSVTALMCGGCYSKWSHGTTVNVRV*
JGI10216J12902_1015507882	3300000956	Soil	MPSLTLSTKHLPSDTEQPCSVCGARFAPSEDSGSRVLSMKTADQPAVTALMCGGCYSKWSHGATVTARV*
JGI10216J12902_1020122902	3300000956	Soil	MNTLTVSLKHVASQRNQPCAVCGALFVPAEDAGSRVLSIKAPDQEAVGGLMCGGCCSKWSHGAAVTLRPSAAA*
JGI10216J12902_1032372502	3300000956	Soil	MNSLTVSLKHVASQRNQPCAVCAAMFVPAEDSGSRVLSIKAPDQEAVGGLMCGGCYSKWLHGEAMTLRPRAAA*
JGI10216J12902_1038404651	3300000956	Soil	MKDLRISVKHVASQRNQPCAVCSALFIPAEDSGSRVLSIKAPDEDVFGALLCGGCYSKWSHGMTVTIRQHVPQA*
JGI10216J12902_1047495414	3300000956	Soil	MPSLTLSTKHIPSDTEQPCAVCGARFAPSEDSGSRVLSMKTGDQPAVTALMCGGCYSKWSHGATVTARV*
JGI10216J12902_1048823632	3300000956	Soil	MTTLTVSVVHARSDREQPCGVCRARFAPSEDSGSRVLSIKAPDEEPFSALMCGGCYSKWSHGTTVTLHPTPM*
JGI10216J12902_1191390562	3300000956	Soil	MTTLTISVKHVASGVNQPCAACTALFVPGEDTGSRVLSVKAPEQATFGALLCGGCYSKWSHGMTLTLRQNVV*
C688J35102_1199115633	3300002568	Soil	RAVAEMICCGSFLQLQEGPMTTLTLSVIHVRSDREQPCAVCLAQFAPSEDSGSRVLSIKAPEQELVSALMCGGCYSKWSHGKTVTVRTDLAR*
C688J35102_1208434011	3300002568	Soil	MKILNVSVKHVPSPRDQPCGVCAAIFNPAEDSGSRVLSVKAPDEDVYGALMCGGCYSKWAHGMTVSVRQKSAQA*
Ga0032354_11143151	3300003693	Avena Fatua Rhizosphere	MTTLTLSVIHVRSDREQPCAVCLAQFAPSEDSGSRVLSIKAPEQELVSALMCGGCYSKWSHGKTVTVRTDLAR*
Ga0062593_1004906352	3300004114	Soil	MTSLTVSLAHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFTALMCGGCYSKWSHGIVRLHGDSTPPK*
Ga0062593_1010921371	3300004114	Soil	METLTISLKHIASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANAAS*
Ga0062593_1016855322	3300004114	Soil	MTTLTISVKHVPSAASQPCAACTVVFVPSEDSGSRVLTVKAPEQATFGALLCGGCYSKWSHGTT
Ga0062593_1028051692	3300004114	Soil	MKDLRISVKHVASQRNQPCAVCSALFVPAEDSGSRVLSIKAPDQDVFGALLCGGCYSKWSHGMTVTIRQHVPQA*
Ga0063356_1001007423	3300004463	Arabidopsis Thaliana Rhizosphere	MTSLTASVVHVRSDREQPCAVCRAQFVPSEDSGSRVLSLNAAGQEPFSALMCGGCYSKWSHGTTVTLRRT*
Ga0063356_1001358392	3300004463	Arabidopsis Thaliana Rhizosphere	METLTISLKHIASQRDQPCAACGASFVPAEDAGSRVLSLKPPAQEAFGGLMCGGCYSKWSHGATITIRANAAS*
Ga0063356_1007344062	3300004463	Arabidopsis Thaliana Rhizosphere	MTTLTLSATRGRSDQEQRCAACGARFVPLEDSGSRVLSISAPQQASFTALMCGGCFSKWSHGTTMTLHSNGTS*
Ga0063356_1024167522	3300004463	Arabidopsis Thaliana Rhizosphere	MPVTLSVKHVPSEREQPCAVCGAQFVPSEDSGSRTFSMTNPQQLPFSALLCGGCYSKWSHGTTVSIRDATPR*
Ga0062595_1001938752	3300004479	Soil	MTSLTVSLVHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFRALMCGGCFSKWSHGIVRLHGATPPPR*
Ga0062592_1016934632	3300004480	Soil	RLAPHTRYNPLMPVTLSVKHVPSDREQPCAVCGAQFVPSEDSGSRTFSMSNPQQLPFSALLCGGCYSKWSHGTTVSIRDTTSR*
Ga0062591_1005798272	3300004643	Soil	METLTISLKHVDSHRDQPCAACGASFVPAEDAGSRVLSLQAPAQKAFGGLMCGGCYSKWSHGATITIRANAAS*
Ga0062591_1022142522	3300004643	Soil	MPVTLSVKYVPSDREQPCAVCGAQFVPSEDSGSRTFSMSNPQQLPFSALLCGGCYSKWSHGTTVSIRDTTSR*
Ga0058859_110445992	3300004798	Host-Associated	MKDVTIFIKHLASQRNQPCAVCSAPFVPAEDSGSRVFSMKAPEQDGFEALLCGGCYSKWSHGMTVTIRQPLPQV*
Ga0058859_113531563	3300004798	Host-Associated	MTSLTVSLVHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFRALMCGGCFSKCSHGIVRL
Ga0066675_110871502	3300005187	Soil	MTTLTLSVKHVRSDHEQPCAVCGAQFAPSEDSGSRVLSIKTPDQEPFSALMCGGCYSKWSHGTTVTLRGAAVR*
Ga0065714_103186152	3300005288	Miscanthus Rhizosphere	MDSFTVSLKHVASTREQPCGVCGADFVPAEDSGSRVLSIRPDAEPVRGALMCGGCYSKWTHGQTITLR
Ga0065712_100177443	3300005290	Miscanthus Rhizosphere	MDSFTVSLKHVASTREQPCGVCGADFVPAEDSGSRVLSIRPDAEPVRGALMCGGCYSKWTHGQTITLRPQNPA*
Ga0065715_101048453	3300005293	Miscanthus Rhizosphere	MESLTVSLKHIASAREQPCGVCGANFVPAEDAGSRVLSIRPAGEEPLGALMCGGCHSKWTHGQAMTLRPRRASGVPTG*
Ga0065715_101663072	3300005293	Miscanthus Rhizosphere	MQDVTISVRHLASPRNQPCAVCNALFVPAEDSGSRVFSMKAPEQDGFEALLCGGCYSKWSHGMTVTIRQPLPQV*
Ga0065715_109392531	3300005293	Miscanthus Rhizosphere	MKDMRISVKHVASQRNQPCAVCSALFIPAEDSGSRVLSIKTSDQDVFGALLCGGCYSKWSHGMTVTIRQQVPQA*
Ga0065715_111426092	3300005293	Miscanthus Rhizosphere	MTSLTVSLVHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFKALMCGGCYSKWSHGIVTLHGAPTPPK*
Ga0065705_103047764	3300005294	Switchgrass Rhizosphere	MKDLRISVKHVASQRNQLCDVCNALFIPAEDSGSRVLSIKAPEEDVFGALMCGGCYSKWSHGMTVTIRQHLPQ
Ga0070683_1000071425	3300005329	Corn Rhizosphere	MTSLTVSLVHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFRALMCGGCFSKWSHGIVRLHGASPPPR*
Ga0070670_1002465901	3300005331	Switchgrass Rhizosphere	MDSFTVSLKHVASTREQPCGVCGADFVPAEDSGSRVLSIRPDGEPVRGALMCGGCYSKWTHGQTITLRPQNPA*
Ga0070675_1002335631	3300005354	Miscanthus Rhizosphere	MDRRVMLVTGGTLEKMDSLTVSLKHVASTREQPCGVCGADFVPAEDSGSRVLSIRPDREAPRGALMCGGCHSKWTHGQTITLRPQNPG*
Ga0070674_1007046622	3300005356	Miscanthus Rhizosphere	MDRRVMLVTGGTLENMDSLTVSLKHVASTREQPCGVCGADFVPAEDSGSRVLSIRPDREAPRGALMCGGCHSKWTHGQTITLRPQNPG*
Ga0070674_1020570741	3300005356	Miscanthus Rhizosphere	MTSLTLAVKHVPSAREHPCAVCTAVFVPAEDSGSRVLSMSAPEQDPLGTLLCGGCYSKWTHGMPITLKPSPPRP*
Ga0070659_1001364212	3300005366	Corn Rhizosphere	MESLTVSLKHIASTREQPCGVCGANFVPAEDSGSRVLSIRPAGQEPLGALMCGGCHSKWTHGSVISVRPARSS*
Ga0070659_1008255552	3300005366	Corn Rhizosphere	MSDKHQLSPKPERDPIASVTVSLVHERSDREQACAICAAPFAPSEDSGSRLLSIDAADRERFTALMCGGCYSKWSHGMVTLHGTSTPPN*
Ga0070701_106815231	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	WETDADSKGQLLHCLMDTLTISLRHVASERNQPSAVCAALFVPAEDSGSRVLSIKTPAQEAFGGLMCGGCYSKWSHGASIVIRANAAK*
Ga0070711_1016426592	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKALTISLKHVPSQRDQPCAVCNANFVPAEDTGSRVISVKPPDQDVFGALLCGGCYSKWSHGQTVTLRQQTTQA*
Ga0070694_1015529731	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	HCLMDTLTISLRHVASERNQPCAVCAALFVPAEDSGSRVLSIKTPAQEAFGGLMCGGCYSKWSHGASIVIRANAAK*
Ga0073909_105896612	3300005526	Surface Soil	MPVTLSVKHVASDRDQPCAVCGAQFVPSEDSGSRVFSMSKPEQASFSALMCGGCYSKWSHGTTVSIKETTR*
Ga0070672_1015582451	3300005543	Miscanthus Rhizosphere	MDTLTISLRHVASERNQPSAVCAALFVPAEDSGSRVLSIKTPAQEAFGGLMCGGCYSKWSHGASIVIRANAAK*
Ga0074472_109291493	3300005833	Sediment (Intertidal)	VKHVASTKSQPCAACEAGFVPAEDTGSRVLSIKAPDEQPFGALLCGGCYSKWTHGTTMTLRQN*
Ga0075284_10108942	3300005885	Rice Paddy Soil	MTSFTTSLKHVPSQTDQRCSSCSALFVPAEDSGSRVLSIKAQDQEPVSALLCGGCHSKWSHGTTLTLRP*
Ga0075283_10963392	3300005891	Rice Paddy Soil	MASFTTSLKHVPSQTDQRCSSCSALFVPAEDSGSRVLSIKAQDQEPVSALLCGGCHSKWSHGTTLTLRP*
Ga0075417_102340892	3300006049	Populus Rhizosphere	MKVLAISVKHVASQRNQPCGVCRAVFVPAEDSGSRVFSIKAQEQDVFGALLCGGCYSKWSHGLTVTIPQHVPSA*
Ga0075364_100086803	3300006051	Populus Endosphere	MDSLTVSLKHVASTREQPCGVCGANFVPAEDSGSRVLSIRPDREPPRGALLCGGCHSKWTHGQTITLRPQNPA*
Ga0075367_102959031	3300006178	Populus Endosphere	MLVTGGTLENMDSLTVSLKHVASTREQPCGVCGADFVPAEDSGSRVLSIRPDREAPRGALMCGGCHSKWTHGQTITLR
Ga0075366_110493041	3300006195	Populus Endosphere	VSLKHVASTREQPCGVCGADFVPAEDSGSRVLSIRPDREAPRGALMCGGCHSKWTHGQTITLRPQNPG*
Ga0097621_1008024171	3300006237	Miscanthus Rhizosphere	MPVTLSVKHMPSNREQPCAVCGAQFVPAEDSGSRVLSMSKPEQAAFSALMCGGCYSKWSHGTT
Ga0075428_1013229492	3300006844	Populus Rhizosphere	MPSVTVSLVHERSDREQACAICGAPFAPSEDSGSRLLSIDAHDQEPYSALMCGGCYSKWSHGIVKLQGTSTPRK*
Ga0075421_1001043111	3300006845	Populus Rhizosphere	MNTLIVSLKHVASQRNQPCAVCGALFVPAEDSGSRVLSIKAPDQEAVGGLMCGGCYSKWSHGAAMTLRPSAAG*
Ga0075421_1001945563	3300006845	Populus Rhizosphere	MNTLTVSLKHVASQKNQPCAVCGALFVPAEDSGSRVLSIKAPDQKAVGGLMCGGCYSKWLHGAAMTLRPSAAG*
Ga0075421_1003171662	3300006845	Populus Rhizosphere	MNTLTLSVIHVKSNREQPCGVCGAQFVPSEDTGSRVLSIKAPAQEPLGALMCGGCYSKWSHGTTVTVQASLAG*
Ga0075421_1003821582	3300006845	Populus Rhizosphere	MDTLTISLRHVASQRNQPCAVCAAEFVPAEDSGSRVLSIKPQAKDAVGGLMCGGCYSKWSHGAAITLGVRAAV*
Ga0075430_1001635924	3300006846	Populus Rhizosphere	MRTLTISVKHVSSARSQPCDACAAHFVPGEDSGSRVLSVKAPDQDAFGALLCGGCYSKWSHGTTMTLRQHVAKT*
Ga0075430_1014995462	3300006846	Populus Rhizosphere	LRHVASQRNQPCAVCAAEFVPAEDSGSRVLSIKPQAKDAVGGLMCGGCYSKWSHGAAITLGVRAAV*
Ga0075431_1011371361	3300006847	Populus Rhizosphere	HCVMDTLTISLRHVASQRNQPCAVCAAEFVPAEDSGSRVLSIKPQAKDAVGGLMCGGCYSKWSHGAAITLGVRAAV*
Ga0075431_1011708463	3300006847	Populus Rhizosphere	MTTLTLSATRGRSDQEQRCAACGARFVPLEDSGSRVLSISAPQQASFTALMCGGCFSKWSHGTTMTLH
Ga0075431_1020189112	3300006847	Populus Rhizosphere	DEEQLLDCLMNSLTVSLKHVASQRNQPCAVCAAMFVPAEDSGSRVLSIKAPDQEAVGGLMCGGCYSKWSHGAAMTLRPSAAG*
Ga0075420_1003501002	3300006853	Populus Rhizosphere	SQRNQPCAVCAAEFVPAEDSGSRVLSIKPQAKDAVGGLMCGGCYSKWSHGAAITLGVRAAV*
Ga0075425_1000096025	3300006854	Populus Rhizosphere	MKDVTISVRHLASPRNQPCAVCNALFVPAEDSGSRVFSMKAPEQDGFEALLCGGCYSKWSHGMTVTIRQPLPQV*
Ga0075425_1007038342	3300006854	Populus Rhizosphere	MKVLAISVKHVASQRNQPCGVCRAVFVPAEDSGSRVFSIKTQEQDVFGALLCGGCYSKWSHGLTVTIPQHVPSA*
Ga0075434_1007601332	3300006871	Populus Rhizosphere	MKDLTISVKHIASQRSQPCTVCNALFVPAEDTGSRVFSIRVPDEDVSGALLCGGCYSKWSHGMTVTIRQHVAQA*
Ga0075436_1004506741	3300006914	Populus Rhizosphere	MEREEKPMTSLTVSLVHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFKALMCGGCYSKWSHGIVTLHGAPTPPK*
Ga0079216_106107521	3300006918	Agricultural Soil	MPSLTLSVKHFPSNTEQPCAVCGAQFAPSEDSGSRVLSMKTADQPPVTALMCGGCYSKWSHGTTVTARV*
Ga0079216_112637491	3300006918	Agricultural Soil	MSTLTLSATRGRSDQEQRCGACGARFVPWEDSGPRGLSINASEQASFTALMCGGCVSKWSHGTTRMLRSNGPT
Ga0079219_104513412	3300006954	Agricultural Soil	MASVTVSLVHERSDREQACAICDAPLAPSEDSGSRRLSIDAADRAQTGQRLRCLAAPFSALMCGGCYSKWSHGMVTLHGTSTPAR*
Ga0075435_1006344122	3300007076	Populus Rhizosphere	ISVKHVASQRNQPCGVCRAVFVPAEDSGSRVFSIKTQEQDVFGALLCGGCYSKWSHGLTVTIPQHVPSA*
Ga0111539_112809222	3300009094	Populus Rhizosphere	MLVTGGTLENMDSLTVSLKHVASTREQPCGVCGANFVPAEDSGSRVLSIRPDREPPRGALLCGGCHSKWTHGQTITLRPQNPA*
Ga0075418_104165103	3300009100	Populus Rhizosphere	MKTLTISVKHVASAKSQPCAACQSGFVPAEDTGSRVLSIKAPEESAFGALLCGGCYSKWTHGTSVTLRQNAPPS*
Ga0105243_118980051	3300009148	Miscanthus Rhizosphere	QLERTMEREERPMTSLTVSLVHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFKALMCGGCYSKWSHGIVTLHGAPTPPK*
Ga0105243_121349391	3300009148	Miscanthus Rhizosphere	METLTISLKHVASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANSAS*
Ga0111538_118782801	3300009156	Populus Rhizosphere	LKHIASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANAAS*
Ga0111538_133484621	3300009156	Populus Rhizosphere	MWTTLSLSVKHLRSDHEQPCGGCGARFVPSEDSGSRMFSIKAPEQDAFSAIMCGGCYSKWSHGTTMTVRGATTT*
Ga0105242_128170581	3300009176	Miscanthus Rhizosphere	MEREERPMTSLTVSLAHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFTALMCGGCYSKWSHGIV
Ga0105249_134288142	3300009553	Switchgrass Rhizosphere	MTSLTVSLVHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFTALMCGGCYSKWSHGIVRLHGDSTPPK*
Ga0105347_10057615	3300009609	Soil	MKTLTISVKHVASGKSQPCAACEAGFVPAEDTGSRVLSIKAPDENPYGALLCGGCYSKWTHGATMTLRQN*
Ga0126307_109090062	3300009789	Serpentine Soil	MTTLTLSLKHVRSDREQPCAVCGAAFVPSEDSGSRVLSIKAAGQEPFGALMCGGCYSKWSHGATVTANNAAAG*
Ga0126305_104629321	3300010036	Serpentine Soil	MDTLTISLKHVSSQREQPCAVCGASFVPAEDSGSRVLSLQAPAQAAFGGLMCGGCYSKWSHGATITIRANAAK*
Ga0126305_112869052	3300010036	Serpentine Soil	MTTLTLSLKHVRSDREQPCAVCGAAFVPSEDSGSRVLSIKAAGQEPFGALMCGGCYSKWSHGATVTANNAA
Ga0126304_100616612	3300010037	Serpentine Soil	MDSLTISMKHVASNREQPCGVCGANFVPAEDSGSRVLSLKPAGGQAIGALMCGGCHSKWTHGQAMTLRPKSAS*
Ga0126315_108256851	3300010038	Serpentine Soil	MNTLTVSVKHVASESDVPCAVCAALFVPAEDSGSRVFSMKAPDQEPFAALMCGGCYSKWSHGTTVTFRQK*
Ga0126311_104851022	3300010045	Serpentine Soil	MTTLTLSLKHVRSDREQPCAVCGAAFVPTEDSGSRVLSIKAAGQEPFGALMCGGCYSKWSHGATVTANNAAAG*
Ga0134126_109571612	3300010396	Terrestrial Soil	MTSLTVSLAHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFTALMCGGCYSKWSHGIVTLHGAPTPPK*
Ga0134124_117018322	3300010397	Terrestrial Soil	MDSLNVSLKHVASTREQPCGVCGATFVPAEDSGSRVLSIRPDGGPVRGALMCGGCHSKWTHGQTITLRTQNPA*
Ga0134122_127702252	3300010400	Terrestrial Soil	MESLTVSLKHVASTREQPCGVCGANFVPAEDSGSRVLSIRPAGQEPLGALMCGGCHSKWTHGSVISVRPARAS*
Ga0134121_110795172	3300010401	Terrestrial Soil	MKALTISLKHVPSQRDQPCAVCNAYFVPAEDTGSRVISVKPPDQDVFGALLCGGCYSKWSHGQTVTLRQQTTQA*
Ga0134123_101873593	3300010403	Terrestrial Soil	MTSLTVSLVHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFKALMCGGCYSKWSHGIVRLHGDSTPPK*
Ga0134123_108838482	3300010403	Terrestrial Soil	MTSLTVSLAHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFTALMCGGCYSKWSHG
Ga0137455_11586521	3300011429	Soil	MKTLTISVKHVASSKSQPCAACEAGFVPAEDTGSRVLSIRTPDEQPFGALLCGGCYSKWTHGATMTLRQNASS*
Ga0137432_12282301	3300011439	Soil	MKTLTISVKHVASGKSQPCAACEAGFVPAEDTGSRVLSIKAPDESPYGALLCGGCYSKWTHGATMTLRQN*
Ga0150985_1089232162	3300012212	Avena Fatua Rhizosphere	MDSLIVSLKHVASTREQPCGVCGATFVPAEDSGSRVLSIRPDGEPVRGALMCGGCHSKWTHGQTITLRAQNPA*
Ga0137459_11866451	3300012228	Soil	MKSLTISVKHVASSKSQPCAACQSGFVPAEDTGSRVLSIKAPEEAPFGALLCGGCYSKWTHGATMTLRQN*
Ga0137375_101890033	3300012360	Vadose Zone Soil	MPVTLSVKHLPSDREQPCAVCGAKFVPSEDSGSRVFSMTSAAQPPFRALMCGGCYSKWSHGTTVTIRVAV*
Ga0150984_1152808661	3300012469	Avena Fatua Rhizosphere	MDSLIVSLKHVASSREQPCGVCGATFVPAEDSGSRVLSIRPDGEPVRGALMCGGCHSKWTHGQTITLRAQNPA*
Ga0150984_1225167921	3300012469	Avena Fatua Rhizosphere	QEGPMTTLTLSVIHVRSDREQPCAVCLAQFAPSEDSGSRVLSIKAPEQELVSALMCGGCYSKWSHGKTVTVRTDLTR*
Ga0157285_102834991	3300012897	Soil	PHVATGWTRIVGTPPRAALLHCLMETLTISLKHIASQRDQPCAACGASFVPAEDAGSRVLSLKPPAQEAFGGLMCGGCYSKWSHGATITIRANAAS*
Ga0162650_1000022462	3300012939	Soil	MNTLTVSLKHVDSQREQPCSVCGASFVPGEDSGSRVLSIKAPGQEALGCLMCGGCYSKWSHGATITVRANAAK*
Ga0164300_101109253	3300012951	Soil	MKDLRISVKHVASQRNQLCDVCNALFIPAEDSGSRVLSIKAPEEDVFGALLCGGCYSKWSHGMTVTIRQHVPQA*
Ga0164298_103920572	3300012955	Soil	MKDVTISVRHFASPRNEACAVCSALFVPAEDAGSRVFLMKALEQDVFEALLCGGCHSKWSHGMTVTIRHLVPQVSPR*
Ga0164303_112897762	3300012957	Soil	MPVTLSVKHVASDRDQPCAVCGAQFVPSEDSGSRVFSMSKPEQASFSALMCGGCYSKWSHGTTVSIKEPTR*
Ga0164299_108589282	3300012958	Soil	PHMPVTLSVKAVSSKHEQPCAVCGAQFVPSEDSGSRVFSMSKPEQVSFSALMCGGCYSKWSHGTTVSIKETTR*
Ga0164302_103238711	3300012961	Soil	MPVTLSVEAVSLKKKQPCTVCGAQFVPSEDSGSRVFSMSKPEQASFSALMCGGCYSKWSHGTTVSIKETTR*
Ga0164302_110795511	3300012961	Soil	MKDLTISLKHVASQRNQPCGVCNALFVPGEDSGSRVLSIKAPGQDVVGTLMCGGCYSKWSHGMTVTLRQQAAQS*
Ga0164308_118318401	3300012985	Soil	MKDVTISVRHFASPRNEACAVCSALFVPAEDAGSRVFLMKALEQDVFEALLCGGCHSKWSHGMTVTI
Ga0164304_105820783	3300012986	Soil	MPVTLSVKHVASDRDQPCAVCGAQFIPSEDSGSRVFSMSKPEQASFSALMCGGCYSKWSHGTTVSIKETTR*
Ga0075309_10737551	3300014268	Natural And Restored Wetlands	SGMKTLTISVKHVASAKSQPCTACQAGFVPAEDTGSRVLSIKAPDEGAFGALLCGGCYSKWTHGMTMTLRQNAAPHAPIHPRA*
Ga0075327_10009284	3300014272	Natural And Restored Wetlands	MKTLTISVKHVASAKSQPCTACQAGFVPAEDTGSRVLSIKAPDEGAFGALLCGGCYSKWTHGMTMTLRQNAAPHAPIHPRA*
Ga0157380_115168941	3300014326	Switchgrass Rhizosphere	MLVTGGTLENMDSLTVSLKHVASTREQPCGVCGADFVPAEDSGSRVLSIRPDREAPRGALMCGGCHSKWTHGQTITLRPQNPG*
Ga0173480_106103531	3300015200	Soil	METLTISLKHIASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANTAS*
Ga0132258_1001142013	3300015371	Arabidopsis Rhizosphere	MESLTVSLKHIASTREQPCGVCGANFVPAEDSGSRVLSIRPAGQEPLGALMCGGCHSKWTHGSVISVRPARPA*
Ga0132258_116433791	3300015371	Arabidopsis Rhizosphere	MDSVTISVKHVASQRDQLCGVCSAMFVPAEDSGSRVLSISLPQQETFGALLCGGCYSKWTHGTTISL
Ga0132258_117387914	3300015371	Arabidopsis Rhizosphere	MDSVKISVKHVASQRDQPCGVCAAMFVPAEDSGSRVLSMSLPRQETFGALLCGGCYSKWTHGATISLRQNVAR*
Ga0132258_120964662	3300015371	Arabidopsis Rhizosphere	MESLTVSLKHVASTREQPCGVCGANFVPAEDSGSRVLSIRPAGQEPLGALMCGGCHSKWTHGSVISVRPARPS*
Ga0132258_139853192	3300015371	Arabidopsis Rhizosphere	MKDLTVSLKHVASQRNQPCGVCNALFVPAEDSGSRVLSIKAPEQGAVGALMCGGCYSKWSHGMTVTLRQQATQS*
Ga0132257_1000666931	3300015373	Arabidopsis Rhizosphere	ISVKHVASQRDQPCGVCAAMFVPAEDSGSRVLSMSLPRQETFGALLCGGCYSKWTHGATISLRQNVAR*
Ga0132257_1005599012	3300015373	Arabidopsis Rhizosphere	MTSLTVSLAHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQAPFTALMCGGCYSKWSHGIVRLHGDSTPPK*
Ga0132257_1034396762	3300015373	Arabidopsis Rhizosphere	MTTVTVSVVHARSDREQSCGICRARFRPSEDSGSRVLSVKPDEEDGFSALMCGGCYSKWSHG
Ga0132255_1033783741	3300015374	Arabidopsis Rhizosphere	MTTVTVSVVHARSDREQSCGICRARFRPSEDSGSRVLSVKPDEEDAFSALMCGGCYSKWSHGTNLTLS
Ga0184611_10105332	3300018067	Groundwater Sediment	MDTLTISLKHVGSQREQPCAVCGASFVPAEDSGSRVLSLQAPAQEAFGGLMCGGCDSKWSHGATITIRANAAR
Ga0184624_100852052	3300018073	Groundwater Sediment	MDTLTISLKHVGSQREQPCAVCGASFVPAEDSGSRVLSLQAPAQEAFGGLMCGGCYSKWSHGATITIRANAAR
Ga0184612_100337003	3300018078	Groundwater Sediment	MKTLTISVKHVASSKSQPCAACQSGFVPAEDTGSRVLSIKAPDEQPFGALLCGGCYSKWTHGATMTLRQNASS
Ga0184629_102071702	3300018084	Groundwater Sediment	MPVTLSVKHVPSDREQPCAVCGAPFVPSEDSGSRMFSMSNPQQPSFSALLCGGCYSKWSHGTTVSIRDATPR
Ga0190265_100276333	3300018422	Soil	MPSLTLSVKHLPSHTEQPCGVCGAQFAPSEDSGSRVLSMKAADQPQVTALMCGGCYSKWSHGTTVTARV
Ga0190265_102250113	3300018422	Soil	MSTLTLSVKHQPSDVEQTCAVCAARFVSSEDSGSRVFSMKAPEQEPFSALMCGGCYSKWSHGKTVVVRGS
Ga0190265_113949912	3300018422	Soil	MKTLTISVKHVASAKSQPCAACRADFVPAEDTGSRVLSIKAPEEQAFGALLCGGCYSKWTHGTTMTLRQNSAS
Ga0190265_125472972	3300018422	Soil	MPSLTLSLKHLPSHTEQPCTVCGAQFAPSEDSGSRVLSMKTPEQPPVTALMCGGCFSKWSHGTTVTARV
Ga0190272_102408091	3300018429	Soil	MPSLTLSVKHFPSNTEQPCAVCGAQFAPSEDSGSRMLSMKTADQPPVTALMCGGCYSKWSHGTTVTARV
Ga0190275_109599001	3300018432	Soil	MDTLAVSLKHVDSQREQPCSVCGASFVPGEDSGSRVLSIKAPGQEALGCLMCGGCYSKWSHGATITVRANAAK
Ga0190270_104352502	3300018469	Soil	MKTLTISVKHVASGKSQPCAACEAGFVPAEDTGSRVLSIKAPDENPYGALLCGGCYSKWTHGATMTLRQN
Ga0190270_106917251	3300018469	Soil	METLTISLKHIASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANAAS
Ga0190270_123276421	3300018469	Soil	MDTLTISLKHVDSQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCFSKWSHGATITIRANAAR
Ga0190274_107170972	3300018476	Soil	MDTLTISLKHVSSQREQPCAACGASFVPAEDSGSRVLSFQAPAQAAFGGLMCGGCYSKWSHGATITIRANAAK
Ga0190274_139960971	3300018476	Soil	MTTLIVSVKHVASNREQPCAVCRSPFVPSEDAGSRVLSLKAPAQEPLGALMCGGCYSKWSHGTPVELRVSPAG
Ga0190264_100763951	3300019377	Soil	MPSLTLSVKHFPSHTEQPCAVCGAQFAPSEDSGSRVLSMKTADQPPVTALMCGGCYSKWSHGTTVTARV
Ga0210115_10807851	3300025791	Natural And Restored Wetlands	HVPSQTDQRCSSCSALFVPAEDSGSRVLSIKAQDQEPVSALLCGGCHSKWSHGTTLTLRA
Ga0207707_114157891	3300025912	Corn Rhizosphere	TGHCQLEWTMEREERPMTSLTVSLAHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFTALMCGGCYSKWSHGIVRLHGDSTPPK
Ga0207652_105123802	3300025921	Corn Rhizosphere	MTSLTVSLAHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFTALMCGGCYSKWSHGIVRLHGDSTPPK
Ga0207652_113608362	3300025921	Corn Rhizosphere	MESLTVSLKHIASTREQPCGVCGANFVPAEDSGSRVLSIRPAGQEPLGALMCGGCHSKWTHGSVISVRPARSS
Ga0207701_100205943	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLTVSLVHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFRALMCGGCFSKWSHGIVRLHGASPPPR
Ga0207701_101093044	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MDSFTVSLKHVASTREQPCGVCGADFVPAEDSGSRVLSIRPDAEPVRGALMCGGCYSKWTHGQTITLRPQNPA
Ga0207706_104696492	3300025933	Corn Rhizosphere	MESLTVSLKHVASTREQPCGVCGANFVPAEDSGSRVLSIRPAGQEPLGALMCGGCHSKWTHGSVISVRPARSS
Ga0207706_104753662	3300025933	Corn Rhizosphere	MTSLTVSLVHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFTALMCGGCYSKWSHGIVRLHGDSTPPK
Ga0207686_116102692	3300025934	Miscanthus Rhizosphere	MTSLTVSLAHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFTALMCGGCYSKWSHGIV
Ga0207669_116014062	3300025937	Miscanthus Rhizosphere	MTSLTLAVKHVPSAREHPCAVCTAVFVPAEDSGSRVLSMSAPEQDPLGTLLCGGCYSKWTHGMPITLKPSPPRP
Ga0207691_111423831	3300025940	Miscanthus Rhizosphere	MDTLTISLRHVASERNQPSAVCAALFVPAEDSGSRVLSIKTPAQEAFGGLMCGGCYSKWSHGASIVIRANAAK
Ga0207661_114087362	3300025944	Corn Rhizosphere	MDSFTVSLKHVASTREQPCGVCGAQFVPAEDSGSRVLSIRPDRDAVRGALMCGGCHSKWTHGSVISVRPARAS
Ga0207703_106147842	3300026035	Switchgrass Rhizosphere	MTSLTVSLVHERSDREQACAICRAPFAPSEESGSRLLSIDASDQEPIRALMCGGCFSKRSHGIV
Ga0207708_114988851	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLTVSLVHERSDREQACAICRAPFAPSEDSGSRLLSIDASDQEPFKALMCGGCYSKWSHGIVTLHGAPTPPK
Ga0256867_100472252	3300026535	Soil	MTVVTLSVKHLASNREQPCGVCRARFVPSEDSGSRVFSMTAPEQDSFSALMCGGCFSRWSHGTTVEVRGGASA
Ga0209811_103173721	3300027821	Surface Soil	MPVTLSVKHMPSNREQPCAVCGAQFVPAEDSGSRVLSMSKPEQAAFSALMCGGCYSKWSHGT
Ga0209813_100580942	3300027866	Populus Endosphere	MDSLTVSLKHVASTREQPCGVCGANFVPAEDSGSRVLSIRPDREPPRGALLCGGCHSKWTHGQTITLRPQNPA
Ga0209814_103593652	3300027873	Populus Rhizosphere	MKVLAISVKHVASQRNQPCGVCRAVFVPAEDSGSRVFSIKAQEQDVFGALLCGGCYSKWSHGLTVTIPQHVPSA
Ga0209814_105522112	3300027873	Populus Rhizosphere	LLGMKDVTISVRHLASPRNQPCAVCNALFVPAEDSGSRVFSMKALEQDVFEALLCGGCYSKWSHGMTVTIRQPLPQV
Ga0209486_106482782	3300027886	Agricultural Soil	MSTLTLSATRGRSDQEQQCSACGARFVPLEDSGSRVLSISAPEQASFIALMCGGCFSKWSHGTTMTLRSNGTG
Ga0209382_100950442	3300027909	Populus Rhizosphere	MRTLTISVKHVSSARSQPCDACAAHFVPGEDSGSRVLSVKAPDQDAFGALLCGGCYSKWSHGTTMTLRQHVAKT
Ga0209382_104886422	3300027909	Populus Rhizosphere	MNTLTVSLKHVASQKNQPCAVCGALFVPAEDSGSRVLSIKAPDQKAVGGLMCGGCYSKWLHGAAMTLRPSAAG
Ga0209382_108304842	3300027909	Populus Rhizosphere	MDTLTISLRHVASQRNQPCAVCAAEFVPAEDSGSRVLSIKPQAKDAVGGLMCGGCYSKWSHGAAITLGVRAAV
Ga0209382_110310112	3300027909	Populus Rhizosphere	MNTLTLSVIHVKSNREQPCGVCGAQFVPSEDTGSRVLSIKAPAQEPLGALMCGGCYSKWSHGTTVTVQASLAG
Ga0209382_112018452	3300027909	Populus Rhizosphere	MNTLIVSLKHVASQRNQPCAVCGALFVPAEDSGSRVLSIKAPDQEAVGGLMCGGCYSKWSHGAAMTLRPSAAG
Ga0209382_117669601	3300027909	Populus Rhizosphere	MTTLTLSATRGRSDQEQRCAACGARFVPLEDSGSRVLSISAPQQASFTALMCGGCFSKWSHGT
Ga0299907_101064083	3300030006	Soil	MNTLTVSLTHVNSNREQPCAVCGADFVPSQDTGSRVLSIKAPAQEPLGALMCGGCYSKWSHGVAVTIRPSLAG
Ga0247627_101461872	3300030635	Soil	MTRDVETSMTTLTLSVRHVKSDPEQPCGVCGAQFLPREDPGSRVLSIQAAEQAPLNALMCGGCYSKWSHGTTVTVRGTAG
Ga0310887_102191861	3300031547	Soil	METLTISLKHVASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANTAS
Ga0307408_1006364982	3300031548	Rhizosphere	MTTVTLSATRGRSDQEQRCAACGARFVPLEDSGSRVLSINAPEQASFTALMCGGCFSKWSHGTTMTLRSNGTS
Ga0307408_1007970822	3300031548	Rhizosphere	MTTLTLSLKHVRSDREQPCAVCSAPFVPSEDSGSRVLSITAAGQEPFGALMCGGCYSKWSHGATVTAHGGGAA
Ga0310813_100107863	3300031716	Soil	MEAMSTRMVSLVHLQSDREHSCAVCRARFVPSEDSGSRVLSIETPGDEPFSALMCGGCHSKWSHGKTVTLHRTAM
Ga0307405_102753012	3300031731	Rhizosphere	MESLTISLKHIASAREQPCGVCGANFVPAEDSGSRVLSIRPAGEEPLGALMCGGCHSKWTHGQAMTLRPRRTS
Ga0310907_103056492	3300031847	Soil	MTTLTLSATRGRSDQEQRCAACGARFVPLEDSGSRVLSISAPQQASFTALMCGGCFSKWSHGTTMTLHSNGTS
Ga0310907_107102871	3300031847	Soil	METLTISLKHIASQRDQPCAACGASFVPAEDAGSRVLSLKPPAQEAFGGLMCGGCYSKWSHGATITIRANA
Ga0310893_103032271	3300031892	Soil	CMTTLTLSATRGRSDQEQRCAACGARFVPLEDSGSRVLSISAPQQASFTALMCGGCFSKWSHGTTMTLHSNGTS
Ga0310900_100849301	3300031908	Soil	MTTVTLSATRGRSDQEQRCAACGARFVPLEDSGSRVLSISAPQQASFTALMCGGCFSKWSHGTTMTLHSNGTS
Ga0310900_110500812	3300031908	Soil	TRIVSTPPRAALLHCLMDTLTISLKHVASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANAAS
Ga0310901_100559632	3300031940	Soil	MTTLTLSATRGRSDQEHRCAACGARFVPLEDSGSRVLSISAPQQASFTALMCGGCFSKWSHGTTMTLHSNGTS
Ga0310901_102434801	3300031940	Soil	TARRLALLHCLMETLTISLKHIASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANAAS
Ga0310884_104951052	3300031944	Soil	METLTISLKHVASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANT
Ga0307409_1000899682	3300031995	Rhizosphere	MESLTISLKHIASAREQPCGVCGANFVPAEDSGSRVLSIRPAGEEPLGALMCGGCHSKWTHGQA
Ga0310903_106343442	3300032000	Soil	MKTLTISVKHIASAKSQPCAACQSGFVPAEDTGSRVLSIKAPEESAFGALLCGGCYSKWTHGTSVTLRQNAPS
Ga0310902_102468462	3300032012	Soil	MTTLTLSATRGRSDQEQRCAACGARFVPLEDSGSRVLSISAPEQALFTALMCGGCFSKWSHGTTMTLHSNGTS
Ga0310906_100461543	3300032013	Soil	METLTISLKHVASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANAAS
Ga0310899_107030301	3300032017	Soil	METLTISLKHVDSHRDQPCAACGASFVPAEDAGSRVLSLQAPAQKPFGGLMCGGCYSKWSHGATITIRANAAG
Ga0310890_100238961	3300032075	Soil	STPPRAALLHCLMETLTISLKHIASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANAAS
Ga0310890_106120431	3300032075	Soil	ETLTISLKHVASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANAAS
Ga0310895_102231142	3300032122	Soil	ILSTPPRAALLHCLMETLTISLKHIASQRDQPCAACGASFVPAEDAGSRVLSLKPPAQEAFGGLMCGGCYSKWSHGATITIRANAAS
Ga0310889_103606562	3300032179	Soil	LLDCLMNSLTVSLKHVASQRNQPCAVCAAMFVPAEDSGSRVLSIKAPDQEAVGGLMCGGCYSKWLHGEAMTLRPRAAA
Ga0310889_104304461	3300032179	Soil	RRRPTRPSPRFATGWTRILSTPPRAALLHCLMETLTISLKHIASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANAAS
Ga0310896_101565802	3300032211	Soil	PPRAALLHCLMETLTISLKHVASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRANAAS
Ga0310810_104288663	3300033412	Soil	MTTMTVSVAHARSDREQSCGVCRARFRPSEDSGSRVLSIKPDEEDAFSALMCGGCYSKWSHGTNL
Ga0310810_113571062	3300033412	Soil	HPLSPKRERDRMASVTVSLVHERSDREQACAICDAPFAPSEDSGSRLLSIDAADREPFTALMCGGCYSKWSHGMVTLHGTSTPSK
Ga0364925_0010743_236_457	3300034147	Sediment	METLTISLKHIASQRDQPCAACGASFVPAEDAGSRVLSLKAPAQEAFGGLMCGGCYSKWSHGATITIRAYAAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F025784

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences