Metagenome / Metatranscriptome Family F025125

Basic Information
Family ID	F025125
Family Type	Metagenome / Metatranscriptome
Number of Sequences	203
Average Sequence Length	47 residues
Representative Sequence	VLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGMECRLLSLNDSPEL
Number of Associated Samples	172
Number of Associated Scaffolds	203

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.66 %
% of genes near scaffold ends (potentially truncated)	99.51 %
% of genes from short scaffolds (< 2000 bps)	87.68 %
Associated GOLD sequencing projects	158
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (98.522 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.138 % of family members)
Environment Ontology (ENVO)	Unclassified (26.108 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.813 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74. 1FA3_11555420 2JGI12635J15846_100066471 3JGI25617J43924_103395272 4Ga0062388_1002707532 5Ga0066680_100184794 6Ga0066680_102687611 7Ga0066679_106618142 8Ga0008090_158374672 9Ga0070708_1000401465 10Ga0070706_1007002352 11Ga0070697_1017395792 12Ga0070697_1017722441 13Ga0070730_102886693 14Ga0070733_104037691 15Ga0066707_101296631 16Ga0066708_100491712 17Ga0066691_109059411 18Ga0070761_105859122 19Ga0066706_105272561 20Ga0070762_101423641 21Ga0070762_110872542 22Ga0066787_101580042 23Ga0075030_1000620522 24Ga0075018_103278832 25Ga0070716_1015057561 26Ga0070712_1003127411 27Ga0070765_1007065602 28Ga0097621_1009696281 29Ga0079220_102454722 30Ga0075425_1001221331 31Ga0075425_1006654583 32Ga0099794_101724961 33Ga0099795_100768033 34Ga0066710_1013268242 35Ga0099829_117372742 36Ga0099830_115365632 37Ga0105247_115680652 38Ga0116128_10389843 39Ga0116124_10026801 40Ga0116112_10075626 41Ga0116217_104048771 42Ga0126373_127538941 43Ga0126370_100879562 44Ga0126370_107973312 45Ga0126370_120533252 46Ga0126372_107967993 47Ga0126372_109414472 48Ga0126372_128739412 49Ga0126372_129746122 50Ga0126377_120407612 51Ga0126381_1036442742 52Ga0150983_139010531 53Ga0137392_101270563 54Ga0137392_103092081 55Ga0137392_107329492 56Ga0137392_109024931 57Ga0137391_107367851 58Ga0137391_113459202 59Ga0137389_102033584 60Ga0137389_106403751 61Ga0137389_112186712 62Ga0137388_113314501 63Ga0137364_104804822 64Ga0137382_112197712 65Ga0137363_100063166 66Ga0137363_106932091 67Ga0137363_110831831 68Ga0137399_115433622 69Ga0137380_115699181 70Ga0137377_101361841 71Ga0137387_106897602 72Ga0137387_110589651 73Ga0137386_112888211 74Ga0137360_103345971 75Ga0137360_114183092 76Ga0137390_109456151 77Ga0134045_10116651 78Ga0137358_104485951 79Ga0137397_112574792 80Ga0137396_103727982 81Ga0137394_103776281 82Ga0137394_113206361 83Ga0137359_104633001 84Ga0137419_103180381 85Ga0137416_105906952 86Ga0137416_116717272 87Ga0153915_100930911 88Ga0164300_111311851 89Ga0153916_122505671 90Ga0153916_127223622 91Ga0126369_100746574 92Ga0163162_125435852 93Ga0181527_10329471 94Ga0181524_100455434 95Ga0163163_113828851 96Ga0137405_12837542 97Ga0137420_11838642 98Ga0137412_105696901 99Ga0132258_103939085 100Ga0182041_112208622 101Ga0182035_114814002 102Ga0182032_107028371 103Ga0182034_104612441 104Ga0182039_104432731 105Ga0182038_116249801 106Ga0182038_116576552 107Ga0187803_102813602 108Ga0187822_101121191 109Ga0187858_103988591 110Ga0187771_112786022 111Ga0187770_116225571 112Ga0066655_111655042 113Ga0066667_104888251 114Ga0066662_112228111 115Ga0193756_10351402 116Ga0210407_100835451 117Ga0210407_108444351 118Ga0210407_111423481 119Ga0210399_103490131 120Ga0215015_100114282 121Ga0179596_103192002 122Ga0179596_104190212 123Ga0179596_105579032 124Ga0210406_100865861 125Ga0210400_101129031 126Ga0210408_105822322 127Ga0210396_111573332 128Ga0210393_105988962 129Ga0210385_105649072 130Ga0210387_117066792 131Ga0210386_115170711 132Ga0210394_104659971 133Ga0210391_101872311 134Ga0210392_108243351 135Ga0210402_117961712 136Ga0210402_118302091 137Ga0247692_10417201 138Ga0247666_10137043 139Ga0247678_10744891 140Ga0207685_102340972 141Ga0207684_112647911 142Ga0207671_115308831 143Ga0209802_10204051 144Ga0209158_10657902 145Ga0257151_10316011 146Ga0257147_10356032 147Ga0209807_13008792 148Ga0209160_10999891 149Ga0209161_102345891 150Ga0209577_101078781 151Ga0207746_10215971 152Ga0207763_10055902 153Ga0207745_10123952 154Ga0209735_10096253 155Ga0209117_11506362 156Ga0209388_10873881 157Ga0209588_12840241 158Ga0209248_101008351 159Ga0209139_101744202 160Ga0209693_105266652 161Ga0209166_100984791 162Ga0209166_105255452 163Ga0209701_105078781 164Ga0209167_102753601 165Ga0209283_100206391 166Ga0209275_103876182 167Ga0209488_104631212 168Ga0209488_107592422 169Ga0073994_100102841 170Ga0170834_1059263182 171Ga0170818_1022458802 172Ga0318538_103834261 173Ga0318561_102778511 174Ga0318572_105003502 175Ga0318560_105386432 176Ga0307476_106803042 177Ga0307474_112175451 178Ga0306917_100103921 179Ga0318500_105637341 180Ga0307475_100846203 181Ga0318509_107141102 182Ga0318508_11233201 183Ga0318523_106232902 184Ga0307473_109145421 185Ga0307478_114218222 186Ga0318495_105076602 187Ga0306919_109941411 188Ga0306925_112788611 189Ga0310910_104604621 190Ga0310909_104689571 191Ga0306926_128053621 192Ga0307479_108338512 193Ga0318531_105765491 194Ga0318556_103382252 195Ga0318558_101137503 196Ga0318533_101930731 197Ga0318533_108705901 198Ga0318504_105559951 199Ga0318577_105375462 200Ga0318540_106288211 201Ga0335078_106901243 202Ga0318519_104106711 203Ga0371487_0168464_916_1074
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74. 1FA3_11555420 2JGI12635J15846_100066471 3Ga0062388_1002707532 4Ga0066680_100184794 5Ga0066680_102687611 6Ga0066679_106618142 7Ga0008090_158374672 8Ga0070697_1017722441 9Ga0070733_104037691 10Ga0066707_101296631 11Ga0066708_100491712 12Ga0070761_105859122 13Ga0066706_105272561 14Ga0099795_100768033 15Ga0137392_103092081 16Ga0137389_106403751 17Ga0137389_112186712 18Ga0137388_113314501 19Ga0137382_112197712 20Ga0137394_103776281 21Ga0153915_100930911 22Ga0153916_122505671 23Ga0187858_103988591 24Ga0066662_112228111 25Ga0210408_105822322 26Ga0207746_10215971 27Ga0207763_10055902 28Ga0207745_10123952 29Ga0209283_100206391 30Ga0209275_103876182 31Ga0307476_106803042 32Ga0318500_105637341
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48 1Ga0137363_110831831 2JGI12635J15846_100066471 3Ga0062388_1002707532 4Ga0066679_106618142 5Ga0070708_1000401465 6Ga0070733_104037691 7Ga0075030_1000620522 8Ga0070716_1015057561 9Ga0070765_1007065602 10Ga0099795_100768033 11Ga0126370_120533252 12Ga0126372_128739412 13Ga0126381_1036442742 14Ga0137389_106403751 15Ga0137389_112186712 16Ga0137388_113314501 17Ga0137382_112197712 18Ga0137416_116717272 19Ga0153916_127223622 20Ga0181527_10329471 21Ga0163163_113828851 22Ga0182035_114814002 23Ga0182032_107028371 24Ga0182038_116576552 25Ga0187803_102813602 26Ga0187858_103988591 27Ga0187771_112786022 28Ga0066662_112228111 29Ga0210407_111423481 30Ga0210393_105988962 31Ga0210386_115170711 32Ga0210391_101872311 33Ga0207684_112647911 34Ga0209807_13008792 35Ga0207763_10055902 36Ga0209248_101008351 37Ga0209693_105266652 38Ga0209166_105255452 39Ga0073994_100102841 40Ga0170818_1022458802 41Ga0318572_105003502 42Ga0307476_106803042 43Ga0306917_100103921 44Ga0318540_106288211
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.26% β-sheet: 0.00% Coil/Unstructured: 69.74%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Pfam ID	Name	% Frequency in 203 Family Scaffolds
PF13419	HAD_2	45.32
PF06245	DUF1015	8.37
PF13242	Hydrolase_like	3.45
PF01435	Peptidase_M48	2.46
PF01740	STAS	1.48
PF13472	Lipase_GDSL_2	0.99
PF16912	Glu_dehyd_C	0.49
PF13432	TPR_16	0.49
PF16875	Glyco_hydro_36N	0.49
PF00534	Glycos_transf_1	0.49

COG ID	Name	Functional Category	% Frequency in 203 Family Scaffolds
COG4198	Uncharacterized conserved protein, DUF1015 family	Function unknown [S]	8.37
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	1.97
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.49
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.49
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.49

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.52 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.52 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.52 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	67.49 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.49 %
Unclassified	root	N/A	1.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.37 %
Unclassified	root	N/A	1.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.42 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.39 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.49 %
Unclassified	root	N/A	1.48 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.39 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.49 %
Unclassified	root	N/A	1.48 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.42 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.49 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.49 %
Unclassified	root	N/A	1.48 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.42 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.49 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.49 %
Unclassified	root	N/A	1.48 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.49 %

Scaffold	Taxonomy	Length	IMG/M Link
2170459023\|GZGNO2B01DH126	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300001593\|JGI12635J15846_10006647	All Organisms → cellular organisms → Bacteria → Acidobacteria	9915	Open in IMG/M
3300002914\|JGI25617J43924_10339527	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300004635\|Ga0062388_100270753	All Organisms → cellular organisms → Bacteria → Acidobacteria	1396	Open in IMG/M
3300005174\|Ga0066680_10018479	All Organisms → cellular organisms → Bacteria	3767	Open in IMG/M
3300005174\|Ga0066680_10268761	All Organisms → cellular organisms → Bacteria → Acidobacteria	1085	Open in IMG/M
3300005176\|Ga0066679_10661814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300005363\|Ga0008090_15837467	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005445\|Ga0070708_100040146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4098	Open in IMG/M
3300005467\|Ga0070706_100700235	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.06%
Host-Associated	Host-Associated	3.94%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	7.88%
Plants	Host-Associated → Plants	3.94%
Terrestrial	Environmental → Terrestrial	88.18%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	6.90%
Peat	Environmental → Terrestrial → Peat	0.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.97%
Roots	Host-Associated → Plants → Roots	0.99%
Sediment	Environmental → Aquatic → Sediment	0.99%
Soil	Environmental → Terrestrial → Soil	87.68%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.49%
Loam	Environmental → Terrestrial → Soil → Loam	10.34%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.97%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.49%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.99%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.98%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.49%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.49%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.99%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.99%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.48%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.49%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.49%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.49%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.49%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.49%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.49%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.49%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.48%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.49%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.14%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.99%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 172 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FA3_11555420	2170459023	Grass Soil	VLIGLFTELDAPGGVQRAGRHLASVLTEFAASRGME
JGI12635J15846_100066471	3300001593	Forest Soil	VLVGIFSELDALGGVQRAGRHLAAVLADFAAGRGMDCRLLSLNGPPELHRLSVGDRD
JGI25617J43924_103395272	3300002914	Grasslands Soil	VIIGLFPELDAPGGVQRAGRHLAAVLTEFAASRGMECRLLS
Ga0062388_1002707532	3300004635	Bog Forest Soil	VLIGLFTELDANGGVQRAGRHLAAVMSEFAASRHMDYRLLS
Ga0066680_100184794	3300005174	Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFAANRGMECRLLTLNDSPQ
Ga0066680_102687611	3300005174	Soil	VLIGLFPELGAPGGVQRAGRHLAAVLTEFASNRGMECRLLSLEDSPELHRVSLGGREFVY
Ga0066679_106618142	3300005176	Soil	MIIGLFPELLATGGIQRVGRHAAAVLAGFAAERGMRYRSLV*
Ga0008090_158374672	3300005363	Tropical Rainforest Soil	VLIGLFPELDAPGGIQRAGRHLALVLAEYAASKQMEYRLLSLNDTQELH
Ga0070708_1000401465	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VLIGLFPELDAPGGVQRASRHMAAVMSEFASTRGMECRLISLNDSPEL
Ga0070706_1007002352	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VLIGLFPELDAPGGVQRAGRHLASVLTEFAASRGMECRILTLNDGPELKRLGVAGREIVF
Ga0070697_1017395792	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VLIGLFPELDAAGGVQRAGRHLASVMTEFAASRGMECRILSL
Ga0070697_1017722441	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VIVGLFPELNAPGGIQRAGRHLAFVLSEYAASHGMEYRFLSLND
Ga0070730_102886693	3300005537	Surface Soil	VLIGLFTELEGTGGVQRASRHLAAVLSEFAASRHMECRLLSLNDTPE
Ga0070733_104037691	3300005541	Surface Soil	VLIGLFTELEGTGGVQRASRHLAAVLSEFAASRHMDCRLISLNETQELHRMSVGGKEFVY
Ga0066707_101296631	3300005556	Soil	VLIGLFPELDAAGGVQRAGRHLASVMTEFAASRGMECRILSLNDGPELKRLSVAGREII
Ga0066708_100491712	3300005576	Soil	VVIGLFPELDAPGGVQRVGRHLAAVLTEFASSRGWDCRLLSL
Ga0066691_109059411	3300005586	Soil	LRVLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGMDCRLLSLNDSPELHRM
Ga0070761_105859122	3300005591	Soil	VIIGLFPELESAGGIQRAGRHLAAVVTEFAAGRGMECRLLSL
Ga0066706_105272561	3300005598	Soil	VIIGLFSELATAGGIQRSGRHLAAVMTEFASSRGME
Ga0070762_101423641	3300005602	Soil	VLIGLFSELGGTGGVQRASRHLAAVLSEFATSRHMDCRL
Ga0070762_110872542	3300005602	Soil	VIIGLFPELEPAGGIQRVGRHLASVMTDFASGRGMECRLLSLNDTP
Ga0066787_101580042	3300005950	Soil	VLIGLFSELESAGGIQRAGRHLAAVMTEFAAGRGMECRLLSLNDSPE
Ga0075030_1000620522	3300006162	Watersheds	VIIGLFTELDATGGVQRAGRHLAAVLSEFASSQGMECRILSLNDS
Ga0075018_103278832	3300006172	Watersheds	LPVLIGLFPELDAPGGVQRAGRHLAAVLTEFAASRGMDCRLLSLNDSPELHRMTLGGRE
Ga0070716_1015057561	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VLLGLFPELDTPGGVQRAGRHVAAVMSEFAANHGMECRLLSLNDSPQLHRL
Ga0070712_1003127411	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VIIGLFSELATAGGIQRSGRHLAAVMTEFASSRGMECRLLSLNDSPE
Ga0070765_1007065602	3300006176	Soil	VLIGLFPELDAPGGVQRAGRHLAAVLAEFAASRGMEYLLLRLNDSPELQRMTL
Ga0097621_1009696281	3300006237	Miscanthus Rhizosphere	VLIGLFTELDAPGGVQRAGRHLASVLTEFAASRGVECR
Ga0079220_102454722	3300006806	Agricultural Soil	VVIGLFPELDAPGGVQRVGRHLAAVLTEFASSRGW
Ga0075425_1001221331	3300006854	Populus Rhizosphere	VLIGLFPELDAPGGVQRAGRHLAAVMTEFAASRGLECRILS
Ga0075425_1006654583	3300006854	Populus Rhizosphere	VLIGLFPELDAPGGVQRAGRHLAAVMTEFAASRGLECRILSLND
Ga0099794_101724961	3300007265	Vadose Zone Soil	LRVLIGLFPELDAPGGVQRVGRHLAAVLTEFASSRGMECR
Ga0099795_100768033	3300007788	Vadose Zone Soil	VLLGLFSELNTPGGVQRAGRHVAAVMSEYAAGHGMECRLLSLNDSPDLHRITVGNREFV
Ga0066710_1013268242	3300009012	Grasslands Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGMDCRLLSLNDSP
Ga0099829_117372742	3300009038	Vadose Zone Soil	VLIGLFPELNAPGGIQRAGRHLAFVMSEYAASHKMESRFLSLNDTQEL
Ga0099830_115365632	3300009088	Vadose Zone Soil	LPVLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGMECRLLSLNDCPELHRMTLAG
Ga0105247_115680652	3300009101	Switchgrass Rhizosphere	VLIGLFPELDAPGGVQRAGRHLAAVMTEFAASRGLECRILSLNDKAELKRLN
Ga0116128_10389843	3300009518	Peatland	VLIGLFPELDAPGGIQRAGRHMAFVLSEFAASRKMEYRMLSLNDTQEL
Ga0116124_10026801	3300009634	Peatland	VLIGLFPELDAPGGIQRAGRHMAFVLSEFAASRKME
Ga0116112_10075626	3300009636	Peatland	VLIGLFPELDAPGGIQRAGRHMAFVLSEFATSRKMEYRMLSLNDTQ
Ga0116217_104048771	3300009700	Peatlands Soil	VVIGLFPELDAAGGIQRASRHMAFVLSEFAASRQMEYRLLSLNDTQELHRM
Ga0126373_127538941	3300010048	Tropical Forest Soil	VLIGLFPELDAPGGIQRAGRHLALVLAEYAASKQMEYR
Ga0126370_100879562	3300010358	Tropical Forest Soil	VVIGLFPELDAPGGVQRVGRHLAAVLTEFASSRGWDCRLLSLNDSPELHRASVGGREFVF
Ga0126370_107973312	3300010358	Tropical Forest Soil	VLIGLFPELDAPGGIQRAGRHLARVLAEYAASKQMEYRLLSLNDTQELHRMRL
Ga0126370_120533252	3300010358	Tropical Forest Soil	VVIGLFPELDGPGGIQRVGRHLAAVLTEFAASRGWECRLLSLNDSY
Ga0126372_107967993	3300010360	Tropical Forest Soil	VLIGLFPELDAPGGVQRAGRHLAAVMTEFAGSRGLECRILSLNDKAELKRLNVTG
Ga0126372_109414472	3300010360	Tropical Forest Soil	VVIGLFPELDAPGGVQRVGRHLAAVLTEFASSRGWDCRLL
Ga0126372_128739412	3300010360	Tropical Forest Soil	VIIGLFPELNTNGGIQRAGRHLAAVMAEFASGRGLECRLLTL
Ga0126372_129746122	3300010360	Tropical Forest Soil	VLIGLFPELDAPGGIQRAGRHLARVLAEYAASKQMEYRLLSLNDTQELHRMRLGDK
Ga0126377_120407612	3300010362	Tropical Forest Soil	VLIGLFPELDAPGGVQRAGRHMAAVMTEFAASRGMEC
Ga0126381_1036442742	3300010376	Tropical Forest Soil	VLIGLFSELDSAGGVQRAGRHLASVMTDFASSRGIECRILSLNDGPELQRMDVAGREIVF
Ga0150983_139010531	3300011120	Forest Soil	VLIGLFPELDAPGGVQRAGRHLAAVMSEFASSRGM
Ga0137392_101270563	3300011269	Vadose Zone Soil	VLIGLFPELDAPGGVQRAGRHLAAVLAEFAANRGMEY
Ga0137392_103092081	3300011269	Vadose Zone Soil	VLIGLFPELNAPGGIQRAGRHLAFVMSEYAASHKMESRFLSLNDTQELHRMHVGDS
Ga0137392_107329492	3300011269	Vadose Zone Soil	LPVLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGM
Ga0137392_109024931	3300011269	Vadose Zone Soil	VVIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGMECRLISLNDSPELHRMTL
Ga0137391_107367851	3300011270	Vadose Zone Soil	VIIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGME
Ga0137391_113459202	3300011270	Vadose Zone Soil	LPVLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGME
Ga0137389_102033584	3300012096	Vadose Zone Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGMDCRLLSLNDSPELHRMTLA
Ga0137389_106403751	3300012096	Vadose Zone Soil	VIIGLFPELEAPGGVQRAGRHLAAVLTEFAASRNMDCRLLSLNDSPELHRITLA
Ga0137389_112186712	3300012096	Vadose Zone Soil	VLLGLFPELATAGGVQRAGRHVAAVMTEFAAGRGMECRLLSLNDTPELHRLAVG
Ga0137388_113314501	3300012189	Vadose Zone Soil	VVIGLFPELESPGGVQRVGRHLAAVLSEFASTRSMEYRLLSLNDTAGQHRMNVGEREF
Ga0137364_104804822	3300012198	Vadose Zone Soil	VLIGLFPELNAPGGVQRASRHLAAVLTEFASSRGMDCRLLSLNDSPEL
Ga0137382_112197712	3300012200	Vadose Zone Soil	VLIGLFPELNAAGGVQRAGRQLASVLTEFAASHGMECRIISLNDGPELQR
Ga0137363_100063166	3300012202	Vadose Zone Soil	VLIGLFPELNAPGGVQRASRHLAAVLTEFASSRGMDCRLLSLNDSPELHRMTLGGR
Ga0137363_106932091	3300012202	Vadose Zone Soil	VLIGLFPELNAPGGIQRAGRHLAFVMSEYAASHKMESRFLSLNDTQELHR
Ga0137363_110831831	3300012202	Vadose Zone Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGMECRLLSLNDSPEL
Ga0137399_115433622	3300012203	Vadose Zone Soil	VLIGLFPELNAPGGIQRAGRHLAFVMSEYAASHKMESRFLSLNDTQELHRM
Ga0137380_115699181	3300012206	Vadose Zone Soil	VLIGLFPELDAPGGVQRAGRHLASVLTEFAASRGMECRILTLNDGPELKRLGVV
Ga0137377_101361841	3300012211	Vadose Zone Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGMACLLLSLNDSPELHRMTLG
Ga0137387_106897602	3300012349	Vadose Zone Soil	LRVLIGLFPELDAPGGVQRAGRHLAAVLTEFAASRGM
Ga0137387_110589651	3300012349	Vadose Zone Soil	VLIGLFPELNAPGGVQRASRHLAAVLTEFASSRGMDCRLLSLNDSPELHRMSLGGREFVF
Ga0137386_112888211	3300012351	Vadose Zone Soil	LRVLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGME
Ga0137360_103345971	3300012361	Vadose Zone Soil	VLLGLFSELNTPGGVQRAGRHVAAVTSEFAAGHGMECRLLSLNDSPELHRMA
Ga0137360_114183092	3300012361	Vadose Zone Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFATSRGMECRLLSLNDSPELHRM
Ga0137390_109456151	3300012363	Vadose Zone Soil	VVIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGMECRLISLNDSPELHRMTLGG
Ga0134045_10116651	3300012409	Grasslands Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFAANRGMECRLLTLNDSP
Ga0137358_104485951	3300012582	Vadose Zone Soil	VLLGLFSELNTPGGVQRAGRHVAAVMSEYAAGHGMECRLLSLNDSPE
Ga0137397_112574792	3300012685	Vadose Zone Soil	VLIGLFPELDAPGGVQRAGRHMAAVMTEFAASRGLECRLLSLNDSPELH
Ga0137396_103727982	3300012918	Vadose Zone Soil	VLLGLFSELNTPGGVQRAGRHVAAVMSEFAAGHGMECRLLSLNDSRELHRIAV
Ga0137394_103776281	3300012922	Vadose Zone Soil	VLIGLFPELDAPGGVQRVGRHMAAVMSEFASSRGMECRLISLNDSPELHRM
Ga0137394_113206361	3300012922	Vadose Zone Soil	VLIGLFPELDAPGGVQCASRHMAAVMSEFASSRGMECRLISLNDSP
Ga0137359_104633001	3300012923	Vadose Zone Soil	VLIGLFPELDAPGGVQRAGRHMAAVLTEFASSRGMECRLLS
Ga0137419_103180381	3300012925	Vadose Zone Soil	VLIGLFPELNAAGGAQRAGRHLASVLTEFAASHGME
Ga0137416_105906952	3300012927	Vadose Zone Soil	VLLGLFSELNTPGGVQRAGRHVAAVMSEYAAGHGMECRLLSLNDSPELHRLTVGNREFVFTG
Ga0137416_116717272	3300012927	Vadose Zone Soil	VLIGLFPELESAGGIQRASRHLAAVMTEFAASRGMECRLLSLNDTPEL
Ga0153915_100930911	3300012931	Freshwater Wetlands	VLVGLFPELDAPGGVQRTGRHLAAVLSEYAAGHHMDYRFLSLNDSPELHRT
Ga0164300_111311851	3300012951	Soil	VLIGLFPELDAPGGVQRAGRHLAAVMTEFAASRGLECRILSLNDRAELKRL
Ga0153916_122505671	3300012964	Freshwater Wetlands	VLVGLFPELDAPGGVQRTGRHLAAVLSEYAAGHHMDY
Ga0153916_127223622	3300012964	Freshwater Wetlands	VLVGLFPELDAPGCVQRAGRHLAAVLSEYAAGHAMDYRFLSLNDSPEL
Ga0126369_100746574	3300012971	Tropical Forest Soil	VLIGLFPELNAPGGIQRAGRHLAFVMSEYAASHKMECRFLSLN
Ga0163162_125435852	3300013306	Switchgrass Rhizosphere	VLIGLFPELDAPGGVQRAGRHLAAVMTEFAASRGLECRIL
Ga0181527_10329471	3300014153	Bog	VLIGLFPELDAPGGIQRAGRHMAFVLSEFAASRQMEYRMLSLNDTQELHRMRVGEREFV
Ga0181524_100455434	3300014155	Bog	VLIGLFPELDAPGGIQRAGRHMAFVLSEFAASRQMEYRMLS
Ga0163163_113828851	3300014325	Switchgrass Rhizosphere	VLIGLFPELDAPGGVQRAGRHMAAVLTEFAASRGLECRILSLNDKAEFKR
Ga0137405_12837542	3300015053	Vadose Zone Soil	VVIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGMDCRLLSLNDSPGLHKMTVG
Ga0137420_11838642	3300015054	Vadose Zone Soil	LPVLIGLFPELDAPGGVQRAGRHLAAVLTEFAASRGMDCRLLSLNDS
Ga0137412_105696901	3300015242	Vadose Zone Soil	VIIGLFPELDAPGGVQHAGRHLAAVLTEFAASRGMECRLLSLNDSP
Ga0132258_103939085	3300015371	Arabidopsis Rhizosphere	VLIGLFPELDAPGGVQRAGRHLAAVMMEFAASRGLECRILS
Ga0182041_112208622	3300016294	Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEYANSRSMECRLLSLNDSP
Ga0182035_114814002	3300016341	Soil	VLIGLFPELNAPGGIQRAGRHMAFLLSEYAGSHKMEYRILSLND
Ga0182032_107028371	3300016357	Soil	VLIGLFPELDAPGGIQRAGRHLALVLSEYAANKQMEYRLLSLNDTQELHRMR
Ga0182034_104612441	3300016371	Soil	VLIGLFPELDATGGVQRAGRHLAAVMTDFASSRGMECRI
Ga0182039_104432731	3300016422	Soil	VLIGLFPELDAPGGIQRAGRHLALVLSEYAANKQMEYR
Ga0182038_116249801	3300016445	Soil	VLIGLFPELDAPGGIQRAGRHLALVLAEYAASKQMEYRLLSLNDT
Ga0182038_116576552	3300016445	Soil	VLIGLFPELNAPGGIQRAGRHLAFVMSEYAASHKMECRFLSLNDSQELH
Ga0187803_102813602	3300017934	Freshwater Sediment	VVIGLFPELEAPGGIQRAGRHLAFILSEFAGSRQKEYRILSLNDT
Ga0187822_101121191	3300017994	Freshwater Sediment	VLIGLFPELDAPGGVQRSGRHLASVMTEFAASRGLECRLLSLNDA
Ga0187858_103988591	3300018057	Peatland	LHSPSRFCQTHRVLIGLFPELDAPGGIQRASRHMASVLSEFAASRQVEYRILTLNDTQELHRM
Ga0187771_112786022	3300018088	Tropical Peatland	MLIGLFPELDAPGGIQRAGRHLALVMSEYAASKEWEYRFLSLND
Ga0187770_116225571	3300018090	Tropical Peatland	VIIGLFPELDAPGGIQRAGRHMAFVLSELAASRQM
Ga0066655_111655042	3300018431	Grasslands Soil	VLIGLFAELDAPGGVQRAGRHLASVLTEFAASRGMECRILTLNDG
Ga0066667_104888251	3300018433	Grasslands Soil	VLIGLFPELNAPGGVQRASRHLAAVLTEFASSRGMDCRLLSLNDSPELHRMSL
Ga0066662_112228111	3300018468	Grasslands Soil	VVIGLFPELEAPGGVQRAGRHLAAVLREFDARESMEYGVLNLD
Ga0193756_10351402	3300019866	Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGMACVLLS
Ga0210407_100835451	3300020579	Soil	VLIGLFPELDAPGGVQRAGRHIAAVLSEFAASRGMDCRLLSLNDS
Ga0210407_108444351	3300020579	Soil	VLIGLFPELDAPGGVQRAGRHIAAVLSEFAASRGMDCRLLSLNDSPELHRMSA
Ga0210407_111423481	3300020579	Soil	VIIGLFPELDGPGGVQRAGRHLAAVLTEFAASRGMECRLISLNDSQELHRMSVGG
Ga0210399_103490131	3300020581	Soil	VLIGLFPELDAPGGVQRAGRHLAAVMSEFASSRGMEYRFLSLNDSPELHRMTLG
Ga0215015_100114282	3300021046	Soil	VLIGLFPELDAPGGVQRAGRHMAAVLAELAAGHGM
Ga0179596_103192002	3300021086	Vadose Zone Soil	VLLGLFSELNTPGGVQRAGRHVAAVMSEFAAGHGMECRLLSLNDSPE
Ga0179596_104190212	3300021086	Vadose Zone Soil	LPVLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGL
Ga0179596_105579032	3300021086	Vadose Zone Soil	VIIGLFPELDAPGGVQRAGRHLAAVLTEFAASRGMECRLLSLNDSPELHRMTLGGREF
Ga0210406_100865861	3300021168	Soil	VLIGLFPELNAPGGIQRAGRHLAFVMSEYAASHKMESRFLSLNDTQELHRMRVGDREF
Ga0210400_101129031	3300021170	Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFASSHSMD
Ga0210408_105822322	3300021178	Soil	VLIGLFPELNAPGGIQRAGRHLAFVMSEYAASHKM
Ga0210396_111573332	3300021180	Soil	VLIGIFSELDAPGGVQPAGRHIAAVLTEFAASRAM
Ga0210393_105988962	3300021401	Soil	VLIGLFPELDAPGGVQRAGRHLASVMTEFAASRGMECRILSLNDGPELKRLKVAEREIVF
Ga0210385_105649072	3300021402	Soil	VIIGLFPELEPAGGIQRVGRHLASVMTDFASGRGMECRLLSLN
Ga0210387_117066792	3300021405	Soil	VIIGLFPELQPAGGIQRVGRHLSAVMTDFASGRGMECRL
Ga0210386_115170711	3300021406	Soil	VIIGLFPELQPAGGIQRVGRHLSAVMTDFASGRGMECRLLSLNDTPELHRMS
Ga0210394_104659971	3300021420	Soil	VIIGLFPELEPAGGIQRVGRHLASVMTDFASGRGMECRLLSL
Ga0210391_101872311	3300021433	Soil	VVIGLFPELDAPGGIQRAGRHLAYVLSEFAAANKMEYRFLSLNDSQELHRMRIAD
Ga0210392_108243351	3300021475	Soil	VLIGLFPELNAPGGIQRAGRHLAFVMSEYAASHKMESR
Ga0210402_117961712	3300021478	Soil	VVIGLFPELDAPGGIQRAGRHLAYVLSEFAAANKMEY
Ga0210402_118302091	3300021478	Soil	VLIGLFPELNAPGGIQRAGRHLAFVMSEYAASHKMESRFLSLNDTQELH
Ga0247692_10417201	3300024279	Soil	VLIGLFPELDAPGGVQRAGRHLASVLTEFAASRGMECRILSLNDGPELKRLAVAGREIVF
Ga0247666_10137043	3300024323	Soil	VLIGLFPELNAPGGIQRAGRHLAFVMSEYASSHKMESRFLSLNDTQ
Ga0247678_10744891	3300024325	Soil	VLIGLFTELDAPGGVQRAGRHMAAVLTEFAASRGM
Ga0207685_102340972	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VLIGLFPELDAPGGVQRAGRHLASVMTEFAASRGMECRILSLNDGPELKQLTVAGQE
Ga0207684_112647911	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VIIGLFPELNSNGGIQRAGQHVAAVMTEFASGRGMECRLLSLNDTPELHRMSVGTREFV
Ga0207671_115308831	3300025914	Corn Rhizosphere	VLIGLFPELDAPGGVQRAGRHLAAVMTEFAGSRGLECRILSLNDKAELKRLN
Ga0209802_10204051	3300026328	Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFAANRGMECRLLTLT
Ga0209158_10657902	3300026333	Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFAANRGMECRLLTLNDSPQLHRMT
Ga0257151_10316011	3300026341	Soil	VLIGLFPELDAPGGVQRAGRHLAAVLAEFASNRGMACLLLSLND
Ga0257147_10356032	3300026475	Soil	VLIGLFPELNAPGGIQRAGRHLAFVMSEYAASHKMESRFLSL
Ga0209807_13008792	3300026530	Soil	VIIGLFSELATAGGIQRSGRHLAAVMTEFASSRGMECRLLSLNDSPELHR
Ga0209160_10999891	3300026532	Soil	VLIGLFPELDAPGGVQRAGRHLASVLTEFAASRGMEC
Ga0209161_102345891	3300026548	Soil	VIIGLFSELATAGGIQRSGRHLAAVMTEFASSRGMECR
Ga0209577_101078781	3300026552	Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGM
Ga0207746_10215971	3300026865	Tropical Forest Soil	VLIGLFPELDAPGGIQRAGRHLALVLSEYAANKQMEYRLLSLNDTQELHRMRLGDREYVFTGA
Ga0207763_10055902	3300026879	Tropical Forest Soil	VLIGLFPELDAPGGIQRAGRHLALLISEFANAKNMEYRLLSLNDSQDLHRMRVGERE
Ga0207745_10123952	3300026889	Tropical Forest Soil	VLIGLFPELDAPGGIQRAGRHLALLISEFANAKNME
Ga0209735_10096253	3300027562	Forest Soil	VLIGIFSELDAPGGVQRASRHIAAVLTEFAASRSMECRLFSLNDS
Ga0209117_11506362	3300027645	Forest Soil	VLVGIFSELDALGGVQRAGRHLAAVLADFAAGRGMDCRLLSLNGPPELHRLS
Ga0209388_10873881	3300027655	Vadose Zone Soil	VLIGLFPELDAPGGVQRVGRHLAAVLTEFASSRGMDCRLI
Ga0209588_12840241	3300027671	Vadose Zone Soil	VLIGLFPELDAPGGVQRAGRHIAAVMSEFASSRGMECRLISLNDSPELHRMTL
Ga0209248_101008351	3300027729	Bog Forest Soil	VLIGLFSELDAAGGVQRAGRHIAAVMKEFADSRGMECRFLS
Ga0209139_101744202	3300027795	Bog Forest Soil	VIIGLFPELEPAGGIQRVGRHLASVMTDFASGRGMECRLLSLNDTPELHRMSVA
Ga0209693_105266652	3300027855	Soil	VLIGLFPELDAPGGIQRAGRHLAFVMSEFAAAHKQEYRMLSLNDTPELHRMRVA
Ga0209166_100984791	3300027857	Surface Soil	VLIGLFPELNAPGGIQRAGRHLAFVMSEYAASHKMESRFLSLNDT
Ga0209166_105255452	3300027857	Surface Soil	VLIGLFPELDAPGGVQRSGRHLASVMTEFAASRGLECRLLSLNDAAELKRLNVA
Ga0209701_105078781	3300027862	Vadose Zone Soil	LPVLIGLFPELDAPGGVQRAGRHLAAVLTEFASSRGMECRLLSLNDSPELHRMTLA
Ga0209167_102753601	3300027867	Surface Soil	VLIGLFTELEGTGGVQRASRHLAAVLSEFAASRHMDCRLISLNETQEL
Ga0209283_100206391	3300027875	Vadose Zone Soil	VLIGLFPELDAPGGVQRASRHMAAVMSEFASTRGMECRL
Ga0209275_103876182	3300027884	Soil	VLIGLFTELEGTGGVQRASRHLAAVMSEFAASRHLDCRLLSLNDTQE
Ga0209488_104631212	3300027903	Vadose Zone Soil	VLIGLFPELDAPGGVQRAGRHLAAVLPEFASSRGMACLLLSLNDSP
Ga0209488_107592422	3300027903	Vadose Zone Soil	VIIGLFPELDAPGGVQRAGRHLAAVLTEFAASRGMECRLLSLNDSPELHRMTLGGRE
Ga0073994_100102841	3300030991	Soil	VLIGIFSELDAPGGVQRASRHIAAVLTEFAASRSMECRLFSLNDSPELHRMSVG
Ga0170834_1059263182	3300031057	Forest Soil	VLIGLFPELNAPGGIQRAGRHLAYLMSEYAASHKMESRFLSLN
Ga0170818_1022458802	3300031474	Forest Soil	VIIGLFPELEPAGGIQRAGCHLAAVITEFAASRKMECRLLSLN
Ga0318538_103834261	3300031546	Soil	VLIGLFPELDAPGGIQRAGRHLALVLSEYAANKQMEYRLLSLNDTQELHRMRLGD
Ga0318561_102778511	3300031679	Soil	MLIGLFPELDAPGGIQRAGRHLALVMSEYAVAKEM
Ga0318572_105003502	3300031681	Soil	VIVGLFPELNAPGGIQRAGRHLAFVLSEYAASHGMEYRFLSLNDTQE
Ga0318560_105386432	3300031682	Soil	VVIGLFSELDAPGGVQRVGRHLAAVLTEFASSRGWDCRLLSLNDTP
Ga0307476_106803042	3300031715	Hardwood Forest Soil	VLLGLFSELDTPGGVQRAGRHVAAVMNEFASGHGLDCRFLSLNDSSELHRLT
Ga0307474_112175451	3300031718	Hardwood Forest Soil	VIIGLFPELEPAGGIQRVGRHLAAVMTEFAASRGM
Ga0306917_100103921	3300031719	Soil	VVIGLFSELDAPGGVQRVGRHLAAVLTEFASSRGWDCRLLSLNDTPELHRGAVG
Ga0318500_105637341	3300031724	Soil	LRFRTRVWQTHRVLIGLFPELDAPGGIQRAGRHLTLVLSEYAGGKQMEFRLLSLNDTQELHRIQLADKE
Ga0307475_100846203	3300031754	Hardwood Forest Soil	VLIGLFPELDGPGGVQRAGRHLASVMTEFAVNRGMECRIL
Ga0318509_107141102	3300031768	Soil	VLIGLFPELDAPGGIQRAGRHLALVLSEYAANKQMEYRLLSLNDTQELHRMRLGDKE
Ga0318508_11233201	3300031780	Soil	VVIGLFSELDAPGGVQRVGRHLAAVLTEFASSRGWDCRLLSLNDTPEL
Ga0318523_106232902	3300031798	Soil	VLIGLFPELDAPGGVQRAGRHLAAVMTEFASSRAMECRILSLNDQAEQQRLNVTGRDI
Ga0307473_109145421	3300031820	Hardwood Forest Soil	VLIGLFPELDAPGGVQRAGRHLASVLTEFAASRGMECRILTLNDG
Ga0307478_114218222	3300031823	Hardwood Forest Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFAASRGMDCRLLSLKDSPD
Ga0318495_105076602	3300031860	Soil	VVIGLFSELDAPGGVQRVGRHLAAVLTEFASSRGWDCRLLSLND
Ga0306919_109941411	3300031879	Soil	VLIGLFPELDAPGGVQRAGRHMAAVLTEFASSRGL
Ga0306925_112788611	3300031890	Soil	VLIGLFPELDAPGGIQRAGRHLALVLSEYAANKQM
Ga0310910_104604621	3300031946	Soil	VLIGLFPELDAPGGIQRAGRHLALVLAEYAASKQMEYRLLSLNDTQ
Ga0310909_104689571	3300031947	Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEFAGSRGLECRILSLNDKAELKRLNVTGRDI
Ga0306926_128053621	3300031954	Soil	VVIGLFPELDAPGGVQRVGRHLAAVLTEFASSRGWDCRLLSLNDSRE
Ga0307479_108338512	3300031962	Hardwood Forest Soil	VLIGLFPELDGPGGVQRAGRHLASVMTEFAANRGMECRILSLNDGPE
Ga0318531_105765491	3300031981	Soil	VLIGLFPELDAPGGIQRAGRHLALVLAEYAASKQMEYRL
Ga0318556_103382252	3300032043	Soil	VLIGLFPELDAPGGIQRAGRHLALVLAEYAASKQMEYRLLSLND
Ga0318558_101137503	3300032044	Soil	VLIGLFPELDAPGGIQRAGRHLALVLAEYAASKQMEYRLLSLNDTQELHRMRLGDKEYVF
Ga0318533_101930731	3300032059	Soil	VLIGLFPELDAPGGIQRAGRHLALVLSEYAANKQMEYRLLSLNDTQELHRMRLGDKEFVF
Ga0318533_108705901	3300032059	Soil	VLIGLFPELDAPGGVQRAGRHLAAVLTEYANSRSMECRLLSLNDSPELHRMSVGN
Ga0318504_105559951	3300032063	Soil	VLIGLFPELDAPGGIQRAGRHLALVLSEYAANKQMEYRLLSLNDTQELHRMRLG
Ga0318577_105375462	3300032091	Soil	VLIGLFPELDAPGGIQRAGRHLALVLAEYAASKQMEYS
Ga0318540_106288211	3300032094	Soil	VLIGLFPELDAPGGVQRAGRHLAAVMTEFASSRAMECRILSLNDQAEQQRLNVTGRDIV
Ga0335078_106901243	3300032805	Soil	VLIGLFPELDAPGGIQRAGRHLAFLLSEFANSKEMEYRLLSLNDS
Ga0318519_104106711	3300033290	Soil	VLIGLFPELDATGGVQRAGRHLAAVMTDFASSRGMECRILSLND
Ga0371487_0168464_916_1074	3300033982	Peat Soil	VLIGLFPELDATGGIQRASRHMAFVLSEYAASRQMEYRMLSLNDTQELHRMRV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F025125

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences