NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F025101

Metagenome / Metatranscriptome Family F025101

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F025101
Family Type Metagenome / Metatranscriptome
Number of Sequences 203
Average Sequence Length 41 residues
Representative Sequence PQDAQLLNHDFQDYLTRFGELQKVARHILEKLAAGQRKAS
Number of Associated Samples 165
Number of Associated Scaffolds 203

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.49 %
% of genes near scaffold ends (potentially truncated) 98.52 %
% of genes from short scaffolds (< 2000 bps) 88.18 %
Associated GOLD sequencing projects 157
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.507 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(21.182 % of family members)
Environment Ontology (ENVO) Unclassified
(31.527 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.246 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60
1JGI12270J11330_101293862
2JGI12648J13191_10073273
3JGI12648J13191_10340192
4JGI12627J18819_102618531
5JGI25617J43924_100214801
6JGI25617J43924_100481073
7Ga0062389_1018650131
8Ga0062386_1005732933
9Ga0066388_1054860382
10Ga0070674_1003521171
11Ga0070711_1001778013
12Ga0073909_104285292
13Ga0070734_108181412
14Ga0070733_102263232
15Ga0070733_112333802
16Ga0066699_108896452
17Ga0066703_100324611
18Ga0066703_106063052
19Ga0066691_100704031
20Ga0066691_101104701
21Ga0066691_101592562
22Ga0066691_108824611
23Ga0070762_105444922
24Ga0070763_103672231
25Ga0066903_1001109381
26Ga0080027_101082692
27Ga0075019_102883441
28Ga0075030_1000242956
29Ga0070716_1015920151
30Ga0070712_1012701011
31Ga0066659_105561012
32Ga0075433_106066521
33Ga0075424_1007474311
34Ga0099791_106253152
35Ga0099829_102826221
36Ga0099830_104487491
37Ga0099828_101252181
38Ga0066709_1006365961
39Ga0099792_112589822
40Ga0116108_12220003
41Ga0116115_10335561
42Ga0116120_11328701
43Ga0126374_100038661
44Ga0126384_105642391
45Ga0126373_103864712
46Ga0126373_127244252
47Ga0134064_100355761
48Ga0074044_103876651
49Ga0126376_102332501
50Ga0126376_104388452
51Ga0126372_129701042
52Ga0126372_132571752
53Ga0134066_104091271
54Ga0126381_1039009101
55Ga0137391_102607971
56Ga0137393_114170352
57Ga0137388_106130922
58Ga0137382_111814152
59Ga0137382_112752961
60Ga0137363_103235341
61Ga0137363_105827951
62Ga0137362_100542301
63Ga0137380_106262222
64Ga0137377_105282141
65Ga0137385_110479772
66Ga0137361_106005971
67Ga0137390_109782872
68Ga0137390_113220642
69Ga0137358_107090112
70Ga0137397_102008991
71Ga0137397_107100811
72Ga0137396_102723992
73Ga0137359_107823082
74Ga0137359_115248471
75Ga0137404_111479692
76Ga0137407_104317212
77Ga0137407_105347811
78Ga0164301_103173862
79Ga0126369_130883441
80Ga0164305_121375671
81Ga0163162_129795731
82Ga0181522_102551173
83Ga0137405_12203762
84Ga0137418_100115481
85Ga0137409_100208545
86Ga0182041_114141662
87Ga0182032_100950753
88Ga0187819_100947421
89Ga0187819_107978831
90Ga0187776_110591521
91Ga0187781_101096683
92Ga0187781_104041821
93Ga0187767_102645692
94Ga0187804_100613661
95Ga0187771_103387691
96Ga0187771_105970252
97Ga0187770_105224231
98Ga0187770_111599761
99Ga0179592_102504702
100Ga0210407_100444884
101Ga0210403_100104699
102Ga0210403_110875852
103Ga0210399_115650692
104Ga0210401_103612121
105Ga0210401_114241712
106Ga0210406_107064972
107Ga0210400_110184671
108Ga0210393_107011961
109Ga0210397_112028491
110Ga0210389_105333292
111Ga0210387_108565662
112Ga0210387_116174171
113Ga0210387_117364702
114Ga0210383_100496681
115Ga0210383_107035561
116Ga0210394_112569241
117Ga0210384_116385961
118Ga0210402_106376691
119Ga0210402_117503251
120Ga0210410_113697582
121Ga0210409_109474431
122Ga0242649_10288311
123Ga0242655_103149381
124Ga0247693_10130031
125Ga0247670_10537302
126Ga0208692_10212954
127Ga0207692_101205193
128Ga0207699_107815151
129Ga0209350_11575392
130Ga0209890_100777051
131Ga0209055_10205201
132Ga0209055_11695131
133Ga0209802_11565421
134Ga0209057_10450083
135Ga0257178_10460902
136Ga0257181_10234091
137Ga0257168_10795801
138Ga0179593_11917471
139Ga0179587_109693721
140Ga0207818_10134761
141Ga0207776_10369731
142Ga0209736_10259181
143Ga0209588_10266423
144Ga0209588_11099372
145Ga0209655_103065982
146Ga0209180_102087602
147Ga0209693_100550201
148Ga0209166_104831622
149Ga0209167_107992952
150Ga0209067_108266831
151Ga0209006_104700261
152Ga0247684_10340211
153Ga0247682_11005922
154Ga0247689_10255982
155Ga0302233_101392841
156Ga0307504_100513202
157Ga0308309_101104251
158Ga0302184_102589771
159Ga0311357_109593262
160Ga0311354_101421194
161Ga0302316_101794142
162Ga0265765_10332922
163Ga0170824_1137168351
164Ga0302326_130012502
165Ga0318541_100562473
166Ga0318538_101944031
167Ga0307476_101771173
168Ga0307474_100323284
169Ga0307469_100504391
170Ga0307469_105388162
171Ga0307469_117730511
172Ga0307477_100315691
173Ga0307475_100112166
174Ga0307475_106528231
175Ga0307475_112591551
176Ga0318550_106249761
177Ga0307478_100232381
178Ga0318564_103908561
179Ga0310917_107363971
180Ga0302315_101418851
181Ga0318527_102605742
182Ga0310912_101842583
183Ga0310916_105877632
184Ga0307479_108754131
185Ga0307479_114415061
186Ga0318533_105158832
187Ga0318513_104712381
188Ga0318540_102474321
189Ga0307470_101068053
190Ga0307471_1009347252
191Ga0307471_1016532572
192Ga0307471_1034493181
193Ga0307472_1003734681
194Ga0307472_1010213352
195Ga0335078_101770964
196Ga0335080_109168711
197Ga0335069_124722451
198Ga0335071_119334021
199Ga0335071_121483142
200Ga0335076_116986872
201Ga0335077_107845521
202Ga0335077_108800692
203Ga0316212_10323001
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 55.88%    β-sheet: 0.00%    Coil/Unstructured: 44.12%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540PQDAQLLNHDFQDYLTRFGELQKVARHILEKLAAGQRKASSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
99.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Bog Forest Soil
Bog
Peatland
Freshwater Sediment
Watersheds
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Surface Soil
Peatlands Soil
Soil
Grasslands Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Tropical Peatland
Bog Forest Soil
Soil
Prmafrost Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Palsa
Switchgrass Rhizosphere
Roots
Populus Rhizosphere
Miscanthus Rhizosphere
18.2%4.9%3.0%5.9%21.2%8.9%3.9%3.9%3.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1012938623300000567Peatlands SoilQLGPQDAQLLNQEFQEYLTRFGELQKLGGVILEKLSTGKRKSA*
JGI12648J13191_100732733300001084Forest SoilLDLNREFQDYLTRFGEMQNIARTILEQIASGARKASA*
JGI12648J13191_103401923300001084Forest SoilPVKLRDMIMRIKLQPQEAQAMNQEFQDYLTRFGEIQRVARAILEKLAAGNPKSA*
JGI12627J18819_1026185313300001867Forest SoilLRHQLDVQDAQLLNQEFQDYLARFGELQKLGRIILEKLASGTKKPA*
JGI25617J43924_1002148013300002914Grasslands SoilLGPQDAQLLNHDFQDYLTRFGELQKIGRGILEKIAAGQRKTS*
JGI25617J43924_1004810733300002914Grasslands SoilRIQLGPQEAQAMNQEFQDYLTRFGEIQRVARGILEKLAVGKAKS*
Ga0062389_10186501313300004092Bog Forest SoilPEEAKLLNHDFQEYLTRFGELQKTARAVLERLAAGQPKSTSTS*
Ga0062386_10057329333300004152Bog Forest SoilILRNQLGPQDAQLLNQEFQDYLTRFGELQKLGGVILEKLSTGQRKSA*
Ga0066388_10548603823300005332Tropical Forest SoilRDMIMRIKLQPNEAQKLNAEFQDYLTRFGEIQKIGRTILEKLSTGARKSA*
Ga0070674_10035211713300005356Miscanthus RhizosphereRHQLRAQDAQLLNQEFQDYLSRFGELQKLGRSILEKLAGSAKKPA*
Ga0070711_10017780133300005439Corn, Switchgrass And Miscanthus RhizosphereDMIMRIKLAPNEAQVMNQEFQDYLTRFGELQKVARTMLEKLSTGARKSA*
Ga0073909_1042852923300005526Surface SoilLNQEFQDYLARFGELQQLGRTILEKLASGTKKPA*
Ga0070734_1081814123300005533Surface SoilIKLQPNEAQTMNQEFQDYLTRFGEIQKVARTMLEKLSAGARKSA*
Ga0070733_1022632323300005541Surface SoilPEEAKLLNHEFQDYLTRFGEIQSVARGILEKVAAGRRKAS*
Ga0070733_1123338023300005541Surface SoilRDAQALNHDFQDYLTRFGELQKVAHGILEKLAAGHRKTA*
Ga0066699_1088964523300005561SoilPEEAQRLNQQFQDYLTRFGEIQKLARGILEKVAAAKSKHA*
Ga0066703_1003246113300005568SoilQDAQLLNHDFQDYLTRFGELQKIGRGILEKIAAGQRKTS*
Ga0066703_1060630523300005568SoilGPQDAQLLNHDFQDYLTRFGELQKIGRGILEKIAAGQRKTS*
Ga0066691_1007040313300005586SoilQDAQVLNHDFQEYLTRFGELQKIGREILEKLAASQRKAS*
Ga0066691_1011047013300005586SoilELNREFQDYLTRFGELQHVARSILERLTTSQPKT*
Ga0066691_1015925623300005586SoilRTKLGPQDAQLLNHEFQDYLTRFGELQKVGRGILEKIAAGQPKTAS*
Ga0066691_1088246113300005586SoilQLLNHDFQDYLARFGDLQKVARGILEKIAAGRRKTP*
Ga0070762_1054449223300005602SoilIKLGPQDAQLLNHDFQDYLTRFGELQRVARGILEKLAAGQPKAS*
Ga0070763_1036722313300005610SoilLQPNEAQLMNSEFQDYITRFGELQKVARTMLEKLSAGARKSA*
Ga0066903_10011093813300005764Tropical Forest SoilLGAQDAQLLNQEFQDYLARFGELQKLGRTILQKLTASAKKPA*
Ga0080027_1010826923300005993Prmafrost SoilHPVKLRDMIMRIQLQPNEAQSMNQEFQDYLTRFGEIQAVARTILQKLATGNPKSA*
Ga0075019_1028834413300006086WatershedsMILRNQLGPQDAQLLNHDFQDYLTRFGELQKIARGILDKLATGQRKTA*
Ga0075030_10002429563300006162WatershedsLGPQDAQLLNHDFQDYLTRFGELQKIARGILDKLATGQRKTA*
Ga0070716_10159201513300006173Corn, Switchgrass And Miscanthus RhizosphereGPEEAKALNHEFQDYLTRFGELQTVARGILEKIAAGRRKSS*
Ga0070712_10127010113300006175Corn, Switchgrass And Miscanthus RhizosphereAMNSEFQDYLTRFGELQRVARGILEKLATGKAKN*
Ga0066659_1055610123300006797SoilLRTKLEASQAQLLNHDFQDYLTRFGELQKLGRIILERLATGQRKAS*
Ga0075433_1060665213300006852Populus RhizosphereRDIILRHQLNVQDAQLLNQEFQDYLARFGELQQLGRTILEKLASGTKKPA*
Ga0075424_10074743113300006904Populus RhizosphereDIILRHQLNVQDAQLLNQEFQDYLARFGELQKLGRAILEKLASGTKKPA*
Ga0099791_1062531523300007255Vadose Zone SoilTEHGPEEAQRLNQEFQDYLTRFGEIQKLARGILEKVAAAKSKSA*
Ga0099829_1028262213300009038Vadose Zone SoilDMILRIQLGPQDAQLMNSEFQDYLTRFGELQRVARGILEKLAAGKAKN*
Ga0099830_1044874913300009088Vadose Zone SoilDAQLLNHDFQDYLARFGELQKVARGILEKIATGQRKAS*
Ga0099828_1012521813300009089Vadose Zone SoilDAQLLNHDFQDYLTRFGELQAVARGILEKIAAGQRKTS*
Ga0066709_10063659613300009137Grasslands SoilQAQLLNHDFQDYLTRFGELQKLGRSILERLATGQRKAS*
Ga0099792_1125898223300009143Vadose Zone SoilKLGPQDAQLLNHDFQDYLTRFGELQKIGRGILEKIAAGQRKTS*
Ga0116108_122200033300009519PeatlandLNQEFQEYLTRFGELQKLGGVILEKLATGQRKSA*
Ga0116115_103355613300009631PeatlandLLNQEFQEYLTRFGELQKLGGVILEKLSTGQRKSA*
Ga0116120_113287013300009641PeatlandQDAQLLNQEFQDYLTRFGELQKLGGVILEKLSTGKRKSA*
Ga0126374_1000386613300009792Tropical Forest SoilMILRTVHDPAEAQQFNQEFQDYLTRFGEIQKIARGILQRVAAAKSKTA*
Ga0126384_1056423913300010046Tropical Forest SoilQDAQLLNQEFQDYLARFGELQKLGRTILQKLTASAKKPA*
Ga0126373_1038647123300010048Tropical Forest SoilQLLNHDFQDYLTRFGELQKLGRGILERLAAGQRKAS*
Ga0126373_1272442523300010048Tropical Forest SoilMILRTQLGPKEAQILNQEFQDYLTRFGELQKLGRAILEQLASSKRKAN*
Ga0134064_1003557613300010325Grasslands SoilLRTKLGPQDAQLLNHNFQDYLTRFGELHKIGRGILEKIAAGQRKTS*
Ga0074044_1038766513300010343Bog Forest SoilLRTQLGPEEAKLLNHEFQDYLTRFGEIQSVARGILEKVAAGRRKAS*
Ga0126376_1023325013300010359Tropical Forest SoilKLDASQAQLLNHDFQDYLTRFGELQKLGRGILERLATGNRKAS*
Ga0126376_1043884523300010359Tropical Forest SoilQLGPKEAQILNQEFQDYLTRFGELQRVGRAILEQLAASKRKAN*
Ga0126372_1297010423300010360Tropical Forest SoilQLLNQEFQDYLSRFGELAKLGRAILEKLSSSAKKPA*
Ga0126372_1325717523300010360Tropical Forest SoilDAQLLNHEFQEYLTRFGDLQKIARGILEKLATGERKSA*
Ga0134066_1040912713300010364Grasslands SoilKLDATQAQLLNHDFQDYLTRFGELQKLGRSILERLATGQRKAS*
Ga0126381_10390091013300010376Tropical Forest SoilQLGAQDAQLLNQEFQDYLSRFGELQKLGRAMLEKLAGSAKKPA*
Ga0137391_1026079713300011270Vadose Zone SoilDAQLLNHDFQDYLTRFGELQKIGRGILEKIAAGQRKTS*
Ga0137393_1141703523300011271Vadose Zone SoilAQLLNHDFQDYLARFGELQKVARGILEKIATGQRKAS*
Ga0137388_1061309223300012189Vadose Zone SoilAQVINQEFQTYLTRFGEIQHTAGEILRKLAAGKPKA*
Ga0137382_1118141523300012200Vadose Zone SoilGPQDAQLLNHDFQDYLTRFGDLQKVARGILEKIAAGQRKTS*
Ga0137382_1127529613300012200Vadose Zone SoilLLNHDFQDYLTRFGDLQKVARGILEKIAAGQRKTS*
Ga0137363_1032353413300012202Vadose Zone SoilMILRVQLGPQDAQLMNSEFQDYLTRFGELQRVARGILEKLAVGKAKN*
Ga0137363_1058279513300012202Vadose Zone SoilPQDAQLLNHDFQDYLTRFGELQKIGRGILEKIAAGQRKTS*
Ga0137362_1005423013300012205Vadose Zone SoilEAQLMNSEFQDYLTRFGELQQVARGILEKLATGKAKN*
Ga0137380_1062622223300012206Vadose Zone SoilQEAQLLNHDFQEYLTRFGDLQKVARGILEKIGAGQRKTS*
Ga0137377_1052821413300012211Vadose Zone SoilDEAQRLNQQFQDYLTRFGEIQKLARGILEKVAAAKSKHA*
Ga0137385_1104797723300012359Vadose Zone SoilLGPQDAQLLNHDFQDYLTRFGDLQKVARGILEKIAAGQRKTS*
Ga0137361_1060059713300012362Vadose Zone SoilLGPQEAQLMNSEFQDYLTRFGELQRVARGILEKLATGKAKN*
Ga0137390_1097828723300012363Vadose Zone SoilRHKLGPQDAQLLNHDFQDYLTRFGELQKVARGILEKLAAGQRKAS*
Ga0137390_1132206423300012363Vadose Zone SoilDMILRVQHGPQEAQIMNSEFQDYLTRFGELQRVARTILEKLSTGKAKN*
Ga0137358_1070901123300012582Vadose Zone SoilTKLGPTEAQVLNQEFQIYLTRFGELQKTARSVLEKLAAGQRKAS*
Ga0137397_1020089913300012685Vadose Zone SoilDAQVLNHDFQDYLTRFGELQKVARGILEKLAAGQRKAS*
Ga0137397_1071008113300012685Vadose Zone SoilMILRVQLGPQEAQIMNSEFQDYLTRFGELQRVARSILEKLSTGKAKN*
Ga0137396_1027239923300012918Vadose Zone SoilPQDAQLLNHDFQDYLTRFGELQKVARHILEKLAAGQRKAS*
Ga0137359_1078230823300012923Vadose Zone SoilQEAQIMNSEFQDYLTRFGELQRVARGILEKLSTGKAKN*
Ga0137359_1152484713300012923Vadose Zone SoilQLMNSEFQDYLTRFGELQRVARGILEKLAVGKAKN*
Ga0137404_1114796923300012929Vadose Zone SoilMNQEFQDYLTRFGEIQKIARTMLEKLATGARKSA*
Ga0137407_1043172123300012930Vadose Zone SoilKLGPQDAQVLNHDFQDYLTRFGELQKVARGILEKLAAGQRKAS*
Ga0137407_1053478113300012930Vadose Zone SoilRTKLGPQDAQILNHEFQDYLTRFGDLQKVGRGILEKIAAGQRKTA*
Ga0164301_1031738623300012960SoilQRLNQQFQDYLTRFGEIQKLARGILEKVAAARSKNA*
Ga0126369_1308834413300012971Tropical Forest SoilGAQDAQLLNQEFQDYLAQFGQLQKLGRSILEKLTSSAKKPA*
Ga0164305_1213756713300012989SoilQLNVQDAQLLNQEFQDYLARFGELQKLGRIILEKLAASAKKPA*
Ga0163162_1297957313300013306Switchgrass RhizosphereLLNQEFQDYLARFGELQQLGRTILEKLASGTKKPA*
Ga0181522_1025511733300014657BogLRTKLDPTKAKDLNREFQDYLTRFGELQKLAGAILTDVAAGVRKTAATS*
Ga0137405_122037623300015053Vadose Zone SoilEAQRLNQEFQDYLARFGEIQKLARSILEKIAAAKSKIA*
Ga0137418_1001154813300015241Vadose Zone SoilQLLNHDFQDYLTRFGELQKVARGILEKIAAGQRKTS*
Ga0137409_1002085453300015245Vadose Zone SoilEAQIMNSEFQDYLTRFGELQRVARSILEKLSSGKAKN*
Ga0182041_1141416623300016294SoilQRLNHEFQEYLARFGDLQKIARTILEKLAAGQRKTA
Ga0182032_1009507533300016357SoilLRHQLGAQDAQLLNQEFQDYLAQFGQLQKLGRSILEKLTGSAKKPA
Ga0187819_1009474213300017943Freshwater SedimentLLNHEFQDYLTRFGELQALGRTILEKLAAGQRKAS
Ga0187819_1079788313300017943Freshwater SedimentMILRNKLGPQDAQLLNHEFQDYLTRFGELQALGRTILEKLAAGQRKAS
Ga0187776_1105915213300017966Tropical PeatlandLGPQEAQLLNQEFQEYLSRFGDLQMLARTILEKLASGQRKTA
Ga0187781_1010966833300017972Tropical PeatlandPQDAQLLNHDFQEYLTRFGELQSLARTILEKLSAGQRKAASL
Ga0187781_1040418213300017972Tropical PeatlandQLLNHDFQEYLARFGELQKIGRSILEKLAAGQRKAS
Ga0187767_1026456923300017999Tropical PeatlandPQDAQLLNHDFQEYLARFCELQKLGRGILEKLATGQRKAS
Ga0187804_1006136613300018006Freshwater SedimentNHEFQEYLTHFGELQNLARTILEKLATGQRKSAAL
Ga0187771_1033876913300018088Tropical PeatlandLGPQDAQLLNQEFQEYLTRFGELQKLGGVILEKLSTGQRKSA
Ga0187771_1059702523300018088Tropical PeatlandLNQEFQEYLARFGELQKLGGVILEKLSTGQRKSQSAG
Ga0187770_1052242313300018090Tropical PeatlandQLLNHEFQEYLSRFGDLQKLAKDILEKLASGQRKSAAT
Ga0187770_1115997613300018090Tropical PeatlandMILRTQLGPEEAKLLNHEFQDYLVRFGELQSIGRGILQKLADGHRKAS
Ga0179592_1025047023300020199Vadose Zone SoilGPQEAQIMNSEFQDYLTRFGELQRVARGILEKLSTGKAKN
Ga0210407_1004448843300020579SoilGPQDAQRMNSEFQDYLTRFGELQRVARGILEKLAAGKGKN
Ga0210403_1001046993300020580SoilKTLNHEFQDYLTRFGELQNVARGVLEKIAAGRRKAS
Ga0210403_1108758523300020580SoilEEAKTLNHEFQDYLTRFGELQNVARGVLEKIAAGRRKAS
Ga0210399_1156506923300020581SoilDMILRIKLQPQEAQVLNQEFQDYLARFGEIQRVARGILEKLAAGNPKSA
Ga0210401_1036121213300020583SoilMILRTQLGPEDAKLLNHEFQDYLTRFGELQSVARGILEKIAAGRRKAS
Ga0210401_1142417123300020583SoilAKVLNHEFQEYLTRFGELQKTARGVLEKIAAGQPKSA
Ga0210406_1070649723300021168SoilQLGPKEAQVLNQEFQDYLTRFGDLQKLGRAILEQLASSKRKAS
Ga0210400_1101846713300021170SoilNEAQLMNSEFQDYITRFGELQKVARTMLEKLSAGARKSA
Ga0210393_1070119613300021401SoilAKLLNHEFQDYLTRFGELQSVARGILEKIAAGRRKAS
Ga0210397_1120284913300021403SoilLRDMIMRIKLAPNEAQVMNQEFQDYLTRFGELQKVARTMLEKLSVGARKSA
Ga0210389_1053332923300021404SoilDMIMRIKLQPQEAQVMNQEFQDYLTRFGEIQRVARGILEKLATGNPKSA
Ga0210387_1085656623300021405SoilDMILRIQLGPQDAQLMNSEFQDYLTRFGELQRVARSILEKLAAGKAKN
Ga0210387_1161741713300021405SoilAQVMNSEFQDYITRFGELQKVARTMLEKLSTGARKSA
Ga0210387_1173647023300021405SoilEAQLLNSEFQEYLTRFGEIQKIARNILEQLSAGQRKSA
Ga0210383_1004966813300021407SoilQPQEAKVMNQEFQDYLTRFGEIQRVARGILEKLASGNPKSA
Ga0210383_1070355613300021407SoilEDAKLLNHEFQDYLTRFGEIQSVARGILEKIAAGRRKAS
Ga0210394_1125692413300021420SoilDAQLLNHDFQDYLSRFGELQKVARGILEKLAAGQPKAS
Ga0210384_1163859613300021432SoilPQEAQLLNHDFQDYLTRFGELQKVGRGILEKIAAGQRKTS
Ga0210402_1063766913300021478SoilIKLQPKEAQVMNHEFQDYLTRFGEIQRLARGILEKLATGNPKSA
Ga0210402_1175032513300021478SoilLGPKEAQVLNHDFQDYLTRFGEIQKIARGILEQLAAGQRKAS
Ga0210410_1136975823300021479SoilPQEAQLMNAEFQDYLARFGELQRVARGILEKLATGKTKN
Ga0210409_1094744313300021559SoilEAKLLNHEFQDYLTRFGALQSVARGILEKIAAGRRKAS
Ga0242649_102883113300022509SoilLLNHEFQDYLTRFGELQGVARGILEKIAAGRRKAS
Ga0242655_1031493813300022532SoilLVPEEAKTLNHEFQDYLTRFGELQNVARGVLEKIAAGRRKAS
Ga0247693_101300313300024181SoilLILRHQLNVHDAQLLNQEFQDYLARFGELQKLGRTILEKLASGTKKPA
Ga0247670_105373023300024283SoilMRIKLQPDEAQVMNQEFQDYLTRFGEIQTVARTILGKLSTGARKSA
Ga0208692_102129543300025472PeatlandDAQLLNQEFQEYLTRFGELQKLGGVILEKLSTGQRKSA
Ga0207692_1012051933300025898Corn, Switchgrass And Miscanthus RhizosphereMIMRIKLQPGEAQTMNQEFQDYLTRFGEIQKVARTILEKLSAGARKSA
Ga0207699_1078151513300025906Corn, Switchgrass And Miscanthus RhizosphereQLGPEEAKALNHEFQDYLTRFGELQTVARGILEKIAAGRRKSS
Ga0209350_115753923300026277Grasslands SoilPQDARLLNHDFQDYLTRFGDLQKVARGILEKIAAGQRKTS
Ga0209890_1007770513300026291SoilLRDRILRTQLGPDEAKELNHEFQTYLTRFGELQKNARSVLEKLAAGQRKAS
Ga0209055_102052013300026309SoilKLGPQDAQLLNHDFQDYLTRFGELQKIGRGILEKIAAGQRKTS
Ga0209055_116951313300026309SoilPQDAQLLNHDFQDYLTRFGELQKIGRGILEKIAAGQRKTS
Ga0209802_115654213300026328SoilKDAQLLNHDFQGYLARFGELQKVARGILEKIATGQRKAS
Ga0209057_104500833300026342SoilTKLDATQAQLLNHDFQDYLTRFGELQKLGRSILERLATGQRKAS
Ga0257178_104609023300026446SoilDMILRVQLGPQEAQLMNSEFQDYLTRFGELQRVARGILEKLASGKAKN
Ga0257181_102340913300026499SoilGPQDAQALNHDFQDYLTRFGELQKVARGILEKLAAGHRKTS
Ga0257168_107958013300026514SoilGPQEAQLLNHDFQDYLTRFGDLQKVARGILEKIAAGQRKTS
Ga0179593_119174713300026555Vadose Zone SoilLLNHDFQDYLARFGDLQKAARGILEKIAAGQRKAS
Ga0179587_1096937213300026557Vadose Zone SoilLRTKLGPEDARILNHEFQDYLTRFGDLQKVGRGILEKIAAGQRKSA
Ga0207818_101347613300026868Tropical Forest SoilLLNHEFQDYLGRFGELQKLGRTILEKLSTGQRKSAAI
Ga0207776_103697313300027035Tropical Forest SoilQLLNHEFQEYLTRFGDLQKIARAILEKLATGERKSA
Ga0209736_102591813300027660Forest SoilTEAQALNQEFQIYLTRFGELQKTARSVLEKLAAGQRKAP
Ga0209588_102664233300027671Vadose Zone SoilDMILRVQLGPQEAQLMNAEFQDYLTRFGELQRVARGILEKLATGKAKN
Ga0209588_110993723300027671Vadose Zone SoilMILRVQLGPQEAQIMNSEFQDYLTRFGELQRVARGILEKLSTGKAKN
Ga0209655_1030659823300027767Bog Forest SoilLPHPVKLRDMIMRIKLQPQEAKVMNQEFQDYLTRFGEIQRVARAILEKLATGNPKSA
Ga0209180_1020876023300027846Vadose Zone SoilEAQAMNQEFQDYLTRFGEIQRVARGILEKLAVGKAKS
Ga0209693_1005502013300027855SoilMRTQLGPEEAKVLNHEFQDYLTRFGELQNVARGVLEKIAAGRRKAT
Ga0209166_1048316223300027857Surface SoilILRTEHPPAEAQRLNQEFQDYLTRFGEIQKLARGILEKVAAAKSKHA
Ga0209167_1079929523300027867Surface SoilTQLGPRDAQALNHDFQDYLTRFGELQKVAHGILEKLAAGHRKTA
Ga0209067_1082668313300027898WatershedsQLGPQEAQLLNHDFQEYLTRFGDLQVIARTILDRLATGQRKSA
Ga0209006_1047002613300027908Forest SoilTEAQALNQEFQTYLTRFGELQKTARSVLEKLAAGQRKAS
Ga0247684_103402113300028138SoilHDAQLLNQEFQDYLARFGELQKLGRTILEKLASGTKKPA
Ga0247682_110059223300028146SoilEAKALNHEFQDYLTRFGELQTVARGILEKIAAGRRKGS
Ga0247689_102559823300028281SoilRDLILRHQLNVHDAQLLNQEFQDYLARFGELQKLGRTILEKLASGTKKPA
Ga0302233_1013928413300028746PalsaLLNHDFQDYLTRFGELQRTARSVLERLAAGQPKET
Ga0307504_1005132023300028792SoilDMILRVQLGPREAQLMNSEFQDYLTRFGELQRVAREILGKLATGKAKN
Ga0308309_1011042513300028906SoilMILRIKLGPQDAQLLNHDFQDYLTRFGELQKVARGILEKLAAGQPKAS
Ga0302184_1025897713300030490PalsaILRTQLGPQEAQALNHDFQDYLTRFGEIQGVARKVLERLATGQPKSTKIA
Ga0311357_1095932623300030524PalsaLNHDFQDYLTRFGEIQGVARKVLERLATGQPKSTKIA
Ga0311354_1014211943300030618PalsaNHDFQDYLTRFGEIQGVARKVLERLATGQPKSTKIA
Ga0302316_1017941423300030646PalsaDAQLLNHDFQDYLTRFGELQRTARSVLERLAAGQPKET
Ga0265765_103329223300030879SoilEEAKVLNHEFQDYLTRFGELQNVARGVLEKIAAGRRKAS
Ga0170824_11371683513300031231Forest SoilEAQVLNQEFQIYLTRFGELQKTARSVLEKLAAGQRKAS
Ga0302326_1300125023300031525PalsaLGPQEAQLLNHDFQEYLTRFGELQCTARSVLERLAAGHPKTS
Ga0318541_1005624733300031545SoilMILRHQLGAQDAQLLNQEFQDYLAQFGQLQKLGRSILEKLTGSAKKPA
Ga0318538_1019440313300031546SoilDAQRLNHEFQEYLARFGDLQKIARTILEKLAAGQRKTA
Ga0307476_1017711733300031715Hardwood Forest SoilQPNEAQAMNSEFQDYIARFGELQKVARTILEKLSTGARKSA
Ga0307474_1003232843300031718Hardwood Forest SoilTKLGPTEAQALNQEFQTYLTRFGELQKTARSVLEKLAAGQRKAS
Ga0307469_1005043913300031720Hardwood Forest SoilQDAQLLNHDFQDYLTRFGEIQKVARGILEKLAAGQRKAS
Ga0307469_1053881623300031720Hardwood Forest SoilILRHKLGPQDAQLLNHDFQDYLTRFGEIQKVARGILEKLAAGQRKAS
Ga0307469_1177305113300031720Hardwood Forest SoilLGAQDAQLLNQEFQDYLARFGELQKLGRDILEKLASSAKKPA
Ga0307477_1003156913300031753Hardwood Forest SoilDAQLMNSEFQEYLTRFGELQRVARGILEKLATGKAKN
Ga0307475_1001121663300031754Hardwood Forest SoilGPQDAQLLNHEFQDYLARFGELQKVGRGILEKIAAGQPKTS
Ga0307475_1065282313300031754Hardwood Forest SoilLRTQLGPEEAKLLNHEFQDYLTRFGEIQSVARGILEKIASGRRKAS
Ga0307475_1125915513300031754Hardwood Forest SoilRTKLGPQDAQLLNHDFQDYLTRFGELQKIGRGILEKIATGQRKTS
Ga0318550_1062497613300031797SoilMILRRQLGAEDAQLLNQEFQEYLSRFGELQKLGRTILEKLVSSARKPL
Ga0307478_1002323813300031823Hardwood Forest SoilQLLNHDFQDYLTRFGELQKVARGILEKLAAGQPKAS
Ga0318564_1039085613300031831SoilDANQAQLLNHDFQDYLTRFGELQKLGRGILERLAAGQRKAS
Ga0310917_1073639713300031833SoilLNHEFQEYLGRFGELQKLGREILRRLSTGERKGART
Ga0302315_1014188513300031837PalsaAQLLNHDFQDYLTRFGELQRTARSVLERLAAGQPKET
Ga0318527_1026057423300031859SoilAQLLNHDFQDYLTRFGELQKLGRGILERLAAGQRKAS
Ga0310912_1018425833300031941SoilQLGAQDAQLLNQEFQDYLAQFGQLQKLGRSILEKLTGSAKKPA
Ga0310916_1058776323300031942SoilAQLLNHEFQEYLTRFGDLQKIARAILEKLATGQRKTA
Ga0307479_1087541313300031962Hardwood Forest SoilGPQDAQLLNHDFQDYLTRFGELQKVGRGILEKIAAGQRKTS
Ga0307479_1144150613300031962Hardwood Forest SoilEAQRLNQEFQDYLARFGEIQKLARSILEKIAAAKSKTA
Ga0318533_1051588323300032059SoilQEFQEYLGRFGELQKLGRTILEKLSTGQRKSAATS
Ga0318513_1047123813300032065SoilILRHQLGAQDAQLLNQEFQDYLAQFGQLQKLGRSILEKLTGSAKKPA
Ga0318540_1024743213300032094SoilKLDANQAQLLNHDFQDYLTRFGELQKLGRGILERLAAGQRKAS
Ga0307470_1010680533300032174Hardwood Forest SoilLLNHDFQEYLTRFGELQKIAGGILDRLANGQRKTA
Ga0307471_10093472523300032180Hardwood Forest SoilQDAQLLNHDFQEYLARFGDLQKAARGILEKIAAGQRKTS
Ga0307471_10165325723300032180Hardwood Forest SoilVLNHDFQDYLTRFGELQKVARVILEKLAAGQRKAS
Ga0307471_10344931813300032180Hardwood Forest SoilDMILRVQLGPQEAQLMNSEFQDYLTRFGELQRVARGILEKLAVGKAKN
Ga0307472_10037346813300032205Hardwood Forest SoilQDAQLLNQEFQDYLARFGELQKLGRIILEKLASGTKKPA
Ga0307472_10102133523300032205Hardwood Forest SoilRHKLGPQDAQLLNHDFQDYLTRFGELQKVARGILEKLAAGQRKAS
Ga0335078_1017709643300032805SoilPEEAKLLNHEFQDYLTRFGELQSVARGILQKIAAGHRKAS
Ga0335080_1091687113300032828SoilEAKLLNHEFQDYLTRFGELQSAARAILQKIAAGRRKAS
Ga0335069_1247224513300032893SoilILRNQLGPQDAQLLNHDFQDYLTRFGDLQKLAFGILDKLANGQRKTA
Ga0335071_1193340213300032897SoilQLLNHDFQEYLTRFGELQKIARSILDRLAAGQRKTA
Ga0335071_1214831423300032897SoilQTMNQEFQDYLTRFGEIQKVARTMLEKLSAGARKSA
Ga0335076_1169868723300032955SoilPEEAQRLNAEFQDYLTRFGEIQKLARGILEKVAAAKSKSA
Ga0335077_1078455213300033158SoilQLGPEEAKLLNHEFQDYLTRFGELQSAARAILQKIAAGRRKAS
Ga0335077_1088006923300033158SoilEAKLLNHEFQDYLTRFGELQSVARGILQKIAAGHRKAS
Ga0316212_103230013300033547RootsVLNHEFQDYLTRFGELQSVARGVLEKIAAGRRKAL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.