Basic Information | |
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Family ID | F024912 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 204 |
Average Sequence Length | 64 residues |
Representative Sequence | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDADALVTSASPVTRSVMS |
Number of Associated Samples | 170 |
Number of Associated Scaffolds | 204 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 87.25 % |
% of genes near scaffold ends (potentially truncated) | 99.02 % |
% of genes from short scaffolds (< 2000 bps) | 92.65 % |
Associated GOLD sequencing projects | 160 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.64 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (79.412 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.177 % of family members) |
Environment Ontology (ENVO) | Unclassified (26.961 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (37.745 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 14.58% β-sheet: 16.67% Coil/Unstructured: 68.75% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.64 |
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Pfam ID | Name | % Frequency in 204 Family Scaffolds |
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PF03069 | FmdA_AmdA | 27.94 |
PF04909 | Amidohydro_2 | 18.63 |
PF00378 | ECH_1 | 7.84 |
PF00296 | Bac_luciferase | 5.39 |
PF00106 | adh_short | 4.41 |
PF00528 | BPD_transp_1 | 3.92 |
PF13561 | adh_short_C2 | 2.94 |
PF02515 | CoA_transf_3 | 1.96 |
PF04237 | YjbR | 1.47 |
PF14534 | DUF4440 | 0.98 |
PF01575 | MaoC_dehydratas | 0.98 |
PF00578 | AhpC-TSA | 0.98 |
PF00903 | Glyoxalase | 0.98 |
PF02581 | TMP-TENI | 0.49 |
PF00561 | Abhydrolase_1 | 0.49 |
PF01370 | Epimerase | 0.49 |
PF04402 | SIMPL | 0.49 |
PF07690 | MFS_1 | 0.49 |
PF08241 | Methyltransf_11 | 0.49 |
PF12911 | OppC_N | 0.49 |
PF02518 | HATPase_c | 0.49 |
PF07687 | M20_dimer | 0.49 |
PF07589 | PEP-CTERM | 0.49 |
PF01261 | AP_endonuc_2 | 0.49 |
PF05013 | FGase | 0.49 |
PF00877 | NLPC_P60 | 0.49 |
PF07969 | Amidohydro_3 | 0.49 |
PF01850 | PIN | 0.49 |
PF00005 | ABC_tran | 0.49 |
PF01595 | CNNM | 0.49 |
PF02836 | Glyco_hydro_2_C | 0.49 |
PF05199 | GMC_oxred_C | 0.49 |
PF13701 | DDE_Tnp_1_4 | 0.49 |
PF13412 | HTH_24 | 0.49 |
PF01979 | Amidohydro_1 | 0.49 |
PF00496 | SBP_bac_5 | 0.49 |
PF07729 | FCD | 0.49 |
COG ID | Name | Functional Category | % Frequency in 204 Family Scaffolds |
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COG2421 | Acetamidase/formamidase | Energy production and conversion [C] | 27.94 |
COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | Coenzyme transport and metabolism [H] | 5.39 |
COG1804 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases | Lipid transport and metabolism [I] | 1.96 |
COG2315 | Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR family | Transcription [K] | 1.47 |
COG0352 | Thiamine monophosphate synthase | Coenzyme transport and metabolism [H] | 0.49 |
COG0791 | Cell wall-associated hydrolase, NlpC_P60 family | Cell wall/membrane/envelope biogenesis [M] | 0.49 |
COG1802 | DNA-binding transcriptional regulator, GntR family | Transcription [K] | 0.49 |
COG2186 | DNA-binding transcriptional regulator, FadR family | Transcription [K] | 0.49 |
COG2303 | Choline dehydrogenase or related flavoprotein | Lipid transport and metabolism [I] | 0.49 |
COG2859 | Outer membrane channel-forming protein BP26/OMP28, SIMPL family | Cell wall/membrane/envelope biogenesis [M] | 0.49 |
COG2968 | Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain | Function unknown [S] | 0.49 |
COG3250 | Beta-galactosidase/beta-glucuronidase | Carbohydrate transport and metabolism [G] | 0.49 |
COG3471 | Predicted secreted (periplasmic) protein | Function unknown [S] | 0.49 |
COG3741 | N-formylglutamate amidohydrolase | Amino acid transport and metabolism [E] | 0.49 |
COG3931 | Predicted N-formylglutamate amidohydrolase | Amino acid transport and metabolism [E] | 0.49 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 79.41 % |
Unclassified | root | N/A | 20.59 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2124908041|P3_CLC_ConsensusfromContig94227 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 988 | Open in IMG/M |
3300002549|JGI24130J36418_10059638 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 962 | Open in IMG/M |
3300002562|JGI25382J37095_10115436 | Not Available | 924 | Open in IMG/M |
3300004157|Ga0062590_100232800 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1368 | Open in IMG/M |
3300005093|Ga0062594_100648871 | All Organisms → cellular organisms → Bacteria | 939 | Open in IMG/M |
3300005166|Ga0066674_10257566 | All Organisms → cellular organisms → Bacteria | 826 | Open in IMG/M |
3300005181|Ga0066678_10307296 | All Organisms → cellular organisms → Bacteria | 1039 | Open in IMG/M |
3300005181|Ga0066678_10444490 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 862 | Open in IMG/M |
3300005186|Ga0066676_10984220 | Not Available | 562 | Open in IMG/M |
3300005187|Ga0066675_10242781 | All Organisms → cellular organisms → Bacteria | 1283 | Open in IMG/M |
3300005295|Ga0065707_10620338 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 679 | Open in IMG/M |
3300005332|Ga0066388_101290282 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1258 | Open in IMG/M |
3300005332|Ga0066388_103027538 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 859 | Open in IMG/M |
3300005439|Ga0070711_100146793 | All Organisms → cellular organisms → Bacteria | 1775 | Open in IMG/M |
3300005440|Ga0070705_100107419 | All Organisms → cellular organisms → Bacteria | 1776 | Open in IMG/M |
3300005441|Ga0070700_101866400 | All Organisms → cellular organisms → Bacteria | 519 | Open in IMG/M |
3300005445|Ga0070708_101927145 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 548 | Open in IMG/M |
3300005446|Ga0066686_10094901 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1912 | Open in IMG/M |
3300005467|Ga0070706_100676113 | All Organisms → cellular organisms → Bacteria | 958 | Open in IMG/M |
3300005526|Ga0073909_10333720 | Not Available | 698 | Open in IMG/M |
3300005543|Ga0070672_100471611 | All Organisms → cellular organisms → Bacteria | 1083 | Open in IMG/M |
3300005549|Ga0070704_101325683 | All Organisms → cellular organisms → Bacteria | 659 | Open in IMG/M |
3300005552|Ga0066701_10391636 | All Organisms → cellular organisms → Bacteria | 860 | Open in IMG/M |
3300005552|Ga0066701_10799838 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 562 | Open in IMG/M |
3300005598|Ga0066706_10113086 | All Organisms → cellular organisms → Bacteria | 1992 | Open in IMG/M |
3300005598|Ga0066706_11010658 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 640 | Open in IMG/M |
3300005764|Ga0066903_105337178 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 679 | Open in IMG/M |
3300005764|Ga0066903_106777015 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 595 | Open in IMG/M |
3300005830|Ga0074473_10210324 | Not Available | 591 | Open in IMG/M |
3300005878|Ga0075297_1006748 | Not Available | 1042 | Open in IMG/M |
3300006163|Ga0070715_10069981 | All Organisms → cellular organisms → Bacteria | 1565 | Open in IMG/M |
3300006196|Ga0075422_10133616 | All Organisms → cellular organisms → Bacteria | 979 | Open in IMG/M |
3300006797|Ga0066659_11435639 | All Organisms → cellular organisms → Bacteria | 577 | Open in IMG/M |
3300006804|Ga0079221_10595493 | All Organisms → cellular organisms → Bacteria | 744 | Open in IMG/M |
3300006844|Ga0075428_100248519 | All Organisms → cellular organisms → Bacteria | 1917 | Open in IMG/M |
3300006845|Ga0075421_101863116 | All Organisms → cellular organisms → Bacteria | 645 | Open in IMG/M |
3300006845|Ga0075421_101877029 | All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella | 642 | Open in IMG/M |
3300006845|Ga0075421_102588823 | Not Available | 527 | Open in IMG/M |
3300006852|Ga0075433_10039488 | All Organisms → cellular organisms → Bacteria | 4082 | Open in IMG/M |
3300006864|Ga0066797_1170719 | All Organisms → cellular organisms → Bacteria | 760 | Open in IMG/M |
3300006871|Ga0075434_100808551 | All Organisms → cellular organisms → Bacteria | 953 | Open in IMG/M |
3300006871|Ga0075434_102038441 | All Organisms → cellular organisms → Bacteria | 579 | Open in IMG/M |
3300006880|Ga0075429_101449924 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 598 | Open in IMG/M |
3300006969|Ga0075419_10619177 | All Organisms → cellular organisms → Bacteria | 762 | Open in IMG/M |
3300006969|Ga0075419_10751642 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae | 695 | Open in IMG/M |
3300007004|Ga0079218_10227597 | All Organisms → cellular organisms → Bacteria | 1449 | Open in IMG/M |
3300007076|Ga0075435_100091183 | All Organisms → cellular organisms → Bacteria | 2515 | Open in IMG/M |
3300007265|Ga0099794_10192342 | All Organisms → cellular organisms → Bacteria | 1043 | Open in IMG/M |
3300007265|Ga0099794_10365335 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia | 752 | Open in IMG/M |
3300009012|Ga0066710_101401723 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1 | 1083 | Open in IMG/M |
3300009012|Ga0066710_103836917 | All Organisms → cellular organisms → Bacteria | 564 | Open in IMG/M |
3300009012|Ga0066710_104239049 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 536 | Open in IMG/M |
3300009012|Ga0066710_104396499 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 527 | Open in IMG/M |
3300009088|Ga0099830_10829538 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 763 | Open in IMG/M |
3300009137|Ga0066709_102314614 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 736 | Open in IMG/M |
3300009137|Ga0066709_104048288 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 533 | Open in IMG/M |
3300009143|Ga0099792_10613232 | All Organisms → cellular organisms → Bacteria | 695 | Open in IMG/M |
3300009156|Ga0111538_12018132 | Not Available | 725 | Open in IMG/M |
3300009553|Ga0105249_11146121 | Not Available | 848 | Open in IMG/M |
3300009792|Ga0126374_10268082 | All Organisms → cellular organisms → Bacteria | 1125 | Open in IMG/M |
3300009817|Ga0105062_1131884 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 513 | Open in IMG/M |
3300009836|Ga0105068_1035552 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 879 | Open in IMG/M |
3300010043|Ga0126380_10375772 | All Organisms → cellular organisms → Bacteria | 1045 | Open in IMG/M |
3300010043|Ga0126380_10619859 | All Organisms → cellular organisms → Bacteria | 856 | Open in IMG/M |
3300010046|Ga0126384_10123167 | All Organisms → cellular organisms → Bacteria | 1954 | Open in IMG/M |
3300010304|Ga0134088_10511965 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 592 | Open in IMG/M |
3300010322|Ga0134084_10267145 | All Organisms → cellular organisms → Bacteria | 624 | Open in IMG/M |
3300010358|Ga0126370_11187094 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 709 | Open in IMG/M |
3300010359|Ga0126376_10989993 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 840 | Open in IMG/M |
3300010360|Ga0126372_12565487 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 561 | Open in IMG/M |
3300010391|Ga0136847_12520929 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1955 | Open in IMG/M |
3300010399|Ga0134127_10154031 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2091 | Open in IMG/M |
3300010399|Ga0134127_13077940 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 544 | Open in IMG/M |
3300010400|Ga0134122_10470621 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1129 | Open in IMG/M |
3300010403|Ga0134123_10016244 | All Organisms → cellular organisms → Bacteria | 5182 | Open in IMG/M |
3300010403|Ga0134123_13322796 | Not Available | 519 | Open in IMG/M |
3300010403|Ga0134123_13556277 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 505 | Open in IMG/M |
3300011395|Ga0137315_1059145 | All Organisms → cellular organisms → Bacteria | 551 | Open in IMG/M |
3300011419|Ga0137446_1099362 | All Organisms → cellular organisms → Bacteria | 690 | Open in IMG/M |
3300011441|Ga0137452_1018610 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2136 | Open in IMG/M |
3300012040|Ga0137461_1123241 | All Organisms → cellular organisms → Bacteria | 752 | Open in IMG/M |
3300012096|Ga0137389_10135722 | All Organisms → cellular organisms → Bacteria | 2000 | Open in IMG/M |
3300012189|Ga0137388_10987841 | All Organisms → cellular organisms → Bacteria | 777 | Open in IMG/M |
3300012200|Ga0137382_10890536 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 641 | Open in IMG/M |
3300012201|Ga0137365_11242272 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 531 | Open in IMG/M |
3300012203|Ga0137399_10859897 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 764 | Open in IMG/M |
3300012206|Ga0137380_10654353 | All Organisms → cellular organisms → Bacteria | 915 | Open in IMG/M |
3300012211|Ga0137377_10274744 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 1617 | Open in IMG/M |
3300012226|Ga0137447_1109920 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 552 | Open in IMG/M |
3300012285|Ga0137370_10099855 | All Organisms → cellular organisms → Bacteria | 1633 | Open in IMG/M |
3300012349|Ga0137387_10786565 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 688 | Open in IMG/M |
3300012350|Ga0137372_10694414 | Not Available | 737 | Open in IMG/M |
3300012353|Ga0137367_10034829 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3868 | Open in IMG/M |
3300012356|Ga0137371_10752626 | Not Available | 744 | Open in IMG/M |
3300012358|Ga0137368_10707672 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 632 | Open in IMG/M |
3300012363|Ga0137390_10102115 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2835 | Open in IMG/M |
3300012363|Ga0137390_11276619 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales | 680 | Open in IMG/M |
3300012582|Ga0137358_10667814 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 695 | Open in IMG/M |
3300012582|Ga0137358_11045307 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 525 | Open in IMG/M |
3300012685|Ga0137397_11329718 | Not Available | 509 | Open in IMG/M |
3300012922|Ga0137394_10396006 | Not Available | 1177 | Open in IMG/M |
3300012925|Ga0137419_10390259 | Not Available | 1085 | Open in IMG/M |
3300012925|Ga0137419_11955169 | All Organisms → cellular organisms → Bacteria | 504 | Open in IMG/M |
3300012927|Ga0137416_11342342 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 646 | Open in IMG/M |
3300012930|Ga0137407_11492199 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 643 | Open in IMG/M |
3300012948|Ga0126375_10600758 | All Organisms → cellular organisms → Bacteria | 840 | Open in IMG/M |
3300012948|Ga0126375_10815741 | All Organisms → cellular organisms → Bacteria | 740 | Open in IMG/M |
3300012957|Ga0164303_10686169 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 688 | Open in IMG/M |
3300012971|Ga0126369_10924121 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 958 | Open in IMG/M |
3300012972|Ga0134077_10406145 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 589 | Open in IMG/M |
3300012972|Ga0134077_10499324 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 539 | Open in IMG/M |
3300013297|Ga0157378_13303375 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 501 | Open in IMG/M |
3300013308|Ga0157375_11296072 | Not Available | 856 | Open in IMG/M |
3300014150|Ga0134081_10061252 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1137 | Open in IMG/M |
3300014150|Ga0134081_10403843 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 513 | Open in IMG/M |
3300014154|Ga0134075_10427819 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 587 | Open in IMG/M |
3300014157|Ga0134078_10452064 | Not Available | 587 | Open in IMG/M |
3300014326|Ga0157380_10404081 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1297 | Open in IMG/M |
3300015053|Ga0137405_1096948 | Not Available | 1206 | Open in IMG/M |
3300015054|Ga0137420_1031744 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 922 | Open in IMG/M |
3300015252|Ga0180075_1098308 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 522 | Open in IMG/M |
3300015264|Ga0137403_10043006 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 4699 | Open in IMG/M |
3300015264|Ga0137403_10677193 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 892 | Open in IMG/M |
3300015359|Ga0134085_10191235 | All Organisms → cellular organisms → Bacteria | 879 | Open in IMG/M |
3300015372|Ga0132256_101670065 | Not Available | 746 | Open in IMG/M |
3300015374|Ga0132255_101963161 | Not Available | 890 | Open in IMG/M |
3300017657|Ga0134074_1058401 | All Organisms → cellular organisms → Bacteria | 1307 | Open in IMG/M |
3300017657|Ga0134074_1339991 | All Organisms → cellular organisms → Bacteria | 552 | Open in IMG/M |
3300018031|Ga0184634_10396188 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 630 | Open in IMG/M |
3300018052|Ga0184638_1003691 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 4853 | Open in IMG/M |
3300018059|Ga0184615_10159174 | Not Available | 1274 | Open in IMG/M |
3300018084|Ga0184629_10503154 | All Organisms → cellular organisms → Bacteria | 630 | Open in IMG/M |
3300018422|Ga0190265_11917739 | All Organisms → cellular organisms → Bacteria | 699 | Open in IMG/M |
3300018429|Ga0190272_11276621 | All Organisms → cellular organisms → Bacteria | 728 | Open in IMG/M |
3300019879|Ga0193723_1194003 | Not Available | 512 | Open in IMG/M |
3300019890|Ga0193728_1139203 | Not Available | 1079 | Open in IMG/M |
3300020065|Ga0180113_1117274 | All Organisms → cellular organisms → Bacteria | 685 | Open in IMG/M |
3300020170|Ga0179594_10055182 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1350 | Open in IMG/M |
3300021080|Ga0210382_10253341 | All Organisms → cellular organisms → Bacteria | 771 | Open in IMG/M |
3300021090|Ga0210377_10397937 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 818 | Open in IMG/M |
3300021333|Ga0210324_1241002 | All Organisms → cellular organisms → Bacteria | 908 | Open in IMG/M |
3300021560|Ga0126371_10202718 | All Organisms → cellular organisms → Bacteria | 2080 | Open in IMG/M |
3300022694|Ga0222623_10235941 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 707 | Open in IMG/M |
3300023071|Ga0247752_1024153 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium | 878 | Open in IMG/M |
3300025481|Ga0208079_1035352 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1285 | Open in IMG/M |
3300025558|Ga0210139_1083423 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium | 654 | Open in IMG/M |
3300025857|Ga0209014_10075486 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1381 | Open in IMG/M |
3300025922|Ga0207646_10792612 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium | 844 | Open in IMG/M |
3300025932|Ga0207690_11378828 | Not Available | 589 | Open in IMG/M |
3300025941|Ga0207711_11405756 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 640 | Open in IMG/M |
3300025961|Ga0207712_11125394 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 699 | Open in IMG/M |
3300025961|Ga0207712_11264112 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 659 | Open in IMG/M |
3300026005|Ga0208285_1005807 | Not Available | 859 | Open in IMG/M |
3300026118|Ga0207675_100128033 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2406 | Open in IMG/M |
3300026301|Ga0209238_1204254 | Not Available | 580 | Open in IMG/M |
3300026316|Ga0209155_1187870 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 660 | Open in IMG/M |
3300026324|Ga0209470_1363892 | Not Available | 517 | Open in IMG/M |
3300026360|Ga0257173_1008930 | Not Available | 1113 | Open in IMG/M |
3300026527|Ga0209059_1261418 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 582 | Open in IMG/M |
3300026547|Ga0209156_10096241 | All Organisms → cellular organisms → Bacteria | 1478 | Open in IMG/M |
3300026548|Ga0209161_10164786 | Not Available | 1268 | Open in IMG/M |
3300026550|Ga0209474_10330737 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 870 | Open in IMG/M |
3300027169|Ga0209897_1024564 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 851 | Open in IMG/M |
3300027332|Ga0209861_1074085 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 501 | Open in IMG/M |
3300027646|Ga0209466_1025014 | All Organisms → cellular organisms → Bacteria | 1233 | Open in IMG/M |
3300027725|Ga0209178_1127665 | Not Available | 865 | Open in IMG/M |
3300027787|Ga0209074_10364893 | All Organisms → cellular organisms → Bacteria | 596 | Open in IMG/M |
3300027846|Ga0209180_10754552 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 525 | Open in IMG/M |
3300027873|Ga0209814_10475955 | Not Available | 552 | Open in IMG/M |
3300027907|Ga0207428_10425872 | Not Available | 970 | Open in IMG/M |
3300027947|Ga0209868_1020056 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 683 | Open in IMG/M |
3300027957|Ga0209857_1013861 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1605 | Open in IMG/M |
3300028596|Ga0247821_10659685 | Not Available | 679 | Open in IMG/M |
3300028792|Ga0307504_10428501 | All Organisms → cellular organisms → Bacteria | 526 | Open in IMG/M |
3300028809|Ga0247824_10469517 | Not Available | 738 | Open in IMG/M |
3300028812|Ga0247825_10904746 | Not Available | 639 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10108559 | All Organisms → cellular organisms → Bacteria | 749 | Open in IMG/M |
3300031543|Ga0318516_10093280 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1693 | Open in IMG/M |
3300031682|Ga0318560_10309658 | All Organisms → cellular organisms → Bacteria | 851 | Open in IMG/M |
3300031720|Ga0307469_10025177 | All Organisms → cellular organisms → Bacteria | 3331 | Open in IMG/M |
3300031720|Ga0307469_11040559 | All Organisms → cellular organisms → Bacteria | 766 | Open in IMG/M |
3300031740|Ga0307468_100279732 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1196 | Open in IMG/M |
3300031740|Ga0307468_100703108 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 845 | Open in IMG/M |
3300031740|Ga0307468_100952845 | Not Available | 750 | Open in IMG/M |
3300031797|Ga0318550_10124559 | All Organisms → cellular organisms → Bacteria | 1228 | Open in IMG/M |
3300031820|Ga0307473_10021515 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2639 | Open in IMG/M |
3300031820|Ga0307473_10517448 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 808 | Open in IMG/M |
3300031858|Ga0310892_10908951 | Not Available | 616 | Open in IMG/M |
3300031893|Ga0318536_10412928 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 681 | Open in IMG/M |
3300031894|Ga0318522_10108150 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1033 | Open in IMG/M |
3300032003|Ga0310897_10283535 | Not Available | 752 | Open in IMG/M |
3300032005|Ga0307411_10230425 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 1443 | Open in IMG/M |
3300032017|Ga0310899_10282701 | Not Available | 764 | Open in IMG/M |
3300032025|Ga0318507_10089974 | All Organisms → cellular organisms → Bacteria | 1269 | Open in IMG/M |
3300032054|Ga0318570_10119593 | All Organisms → cellular organisms → Bacteria | 1163 | Open in IMG/M |
3300032180|Ga0307471_100308679 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1673 | Open in IMG/M |
3300032180|Ga0307471_100316037 | All Organisms → cellular organisms → Bacteria | 1656 | Open in IMG/M |
3300032180|Ga0307471_101562475 | Not Available | 817 | Open in IMG/M |
3300032180|Ga0307471_103482430 | All Organisms → cellular organisms → Bacteria | 557 | Open in IMG/M |
3300032205|Ga0307472_101338969 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 691 | Open in IMG/M |
3300033550|Ga0247829_10488930 | Not Available | 1019 | Open in IMG/M |
3300034165|Ga0364942_0022132 | All Organisms → cellular organisms → Bacteria | 2020 | Open in IMG/M |
3300034176|Ga0364931_0034441 | Not Available | 1494 | Open in IMG/M |
3300034820|Ga0373959_0148141 | Not Available | 592 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 16.18% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 7.84% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 7.35% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 5.88% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 5.39% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 5.39% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 3.92% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 3.92% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.92% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.43% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 2.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.94% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.94% |
Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 2.94% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 2.45% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.96% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.96% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.96% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 1.47% |
Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 1.47% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.98% |
Rice Paddy Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil | 0.98% |
Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.98% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.98% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment | 0.49% |
Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 0.49% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 0.49% |
Sediment (Intertidal) | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal) | 0.49% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.49% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.49% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.49% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.49% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil | 0.49% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 0.49% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.49% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 0.49% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.49% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.49% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.49% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.49% |
Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.49% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.49% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.49% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.49% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2124908041 | Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3 | Environmental | Open in IMG/M |
3300002549 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 | Environmental | Open in IMG/M |
3300002562 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005166 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 | Environmental | Open in IMG/M |
3300005181 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 | Environmental | Open in IMG/M |
3300005186 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 | Environmental | Open in IMG/M |
3300005187 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 | Environmental | Open in IMG/M |
3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
3300005446 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 | Environmental | Open in IMG/M |
3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
3300005552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 | Environmental | Open in IMG/M |
3300005598 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005830 | Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM | Environmental | Open in IMG/M |
3300005878 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104 | Environmental | Open in IMG/M |
3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Environmental | Open in IMG/M |
3300006196 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 | Host-Associated | Open in IMG/M |
3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006864 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 | Environmental | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Environmental | Open in IMG/M |
3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
3300009817 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 | Environmental | Open in IMG/M |
3300009836 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 | Environmental | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010304 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015 | Environmental | Open in IMG/M |
3300010322 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG | Environmental | Open in IMG/M |
3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
3300010391 | Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406 | Environmental | Open in IMG/M |
3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
3300011395 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT200_2 | Environmental | Open in IMG/M |
3300011419 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2 | Environmental | Open in IMG/M |
3300011441 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2 | Environmental | Open in IMG/M |
3300012040 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2 | Environmental | Open in IMG/M |
3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
3300012201 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG | Environmental | Open in IMG/M |
3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
3300012206 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG | Environmental | Open in IMG/M |
3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
3300012226 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2 | Environmental | Open in IMG/M |
3300012285 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG | Environmental | Open in IMG/M |
3300012349 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG | Environmental | Open in IMG/M |
3300012350 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG | Environmental | Open in IMG/M |
3300012353 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG | Environmental | Open in IMG/M |
3300012356 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG | Environmental | Open in IMG/M |
3300012358 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG | Environmental | Open in IMG/M |
3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
3300012685 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG | Environmental | Open in IMG/M |
3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300012972 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014150 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG | Environmental | Open in IMG/M |
3300014154 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015 | Environmental | Open in IMG/M |
3300014157 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG | Environmental | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300015053 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300015054 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300015252 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D | Environmental | Open in IMG/M |
3300015264 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300015359 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015 | Environmental | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300017657 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015 | Environmental | Open in IMG/M |
3300018031 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1 | Environmental | Open in IMG/M |
3300018052 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2 | Environmental | Open in IMG/M |
3300018059 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex | Environmental | Open in IMG/M |
3300018084 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1 | Environmental | Open in IMG/M |
3300018422 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T | Environmental | Open in IMG/M |
3300018429 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T | Environmental | Open in IMG/M |
3300019879 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2 | Environmental | Open in IMG/M |
3300019890 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1 | Environmental | Open in IMG/M |
3300020065 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300020170 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300021080 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo | Environmental | Open in IMG/M |
3300021090 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo | Environmental | Open in IMG/M |
3300021333 | Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.191 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300022694 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex | Environmental | Open in IMG/M |
3300023071 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5 | Environmental | Open in IMG/M |
3300025481 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes) | Environmental | Open in IMG/M |
3300025558 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes) | Environmental | Open in IMG/M |
3300025857 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes) | Environmental | Open in IMG/M |
3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026005 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101 (SPAdes) | Environmental | Open in IMG/M |
3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026301 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes) | Environmental | Open in IMG/M |
3300026316 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes) | Environmental | Open in IMG/M |
3300026324 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes) | Environmental | Open in IMG/M |
3300026360 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B | Environmental | Open in IMG/M |
3300026527 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes) | Environmental | Open in IMG/M |
3300026547 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes) | Environmental | Open in IMG/M |
3300026548 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes) | Environmental | Open in IMG/M |
3300026550 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes) | Environmental | Open in IMG/M |
3300027169 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes) | Environmental | Open in IMG/M |
3300027332 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes) | Environmental | Open in IMG/M |
3300027646 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes) | Environmental | Open in IMG/M |
3300027725 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes) | Environmental | Open in IMG/M |
3300027787 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes) | Environmental | Open in IMG/M |
3300027846 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027873 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300027947 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50 (SPAdes) | Environmental | Open in IMG/M |
3300027957 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes) | Environmental | Open in IMG/M |
3300028596 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14 | Environmental | Open in IMG/M |
3300028792 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S | Environmental | Open in IMG/M |
3300028809 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48 | Environmental | Open in IMG/M |
3300028812 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48 | Environmental | Open in IMG/M |
3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
3300031543 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20 | Environmental | Open in IMG/M |
3300031682 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031797 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23 | Environmental | Open in IMG/M |
3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
3300031893 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28 | Environmental | Open in IMG/M |
3300031894 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18 | Environmental | Open in IMG/M |
3300032003 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1 | Environmental | Open in IMG/M |
3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Host-Associated | Open in IMG/M |
3300032017 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4 | Environmental | Open in IMG/M |
3300032025 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20 | Environmental | Open in IMG/M |
3300032054 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
3300034165 | Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17 | Environmental | Open in IMG/M |
3300034176 | Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17 | Environmental | Open in IMG/M |
3300034820 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 | Host-Associated | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
P3_CLC_00407620 | 2124908041 | Soil | MTDKIQQVYVIQGRGQRDYSDCQTALAQLPARVTLLPFIATEEEVIARARDAAALVVTSSPISRKVMSALEDLKVVV |
JGI24130J36418_100596382 | 3300002549 | Arctic Peat Soil | MTDKIQQVYVIQGRGQRDYSDCQTALAQLPARVTLLPFIATEEEVIARTRDADALVVTSSPI |
JGI25382J37095_101154361 | 3300002562 | Grasslands Soil | MTDQPYHVYVIQGRGQHDYADCQAALARVPARMTALPFIGDENELIARTRDADALVVTYSPVTRGVMGALEGL |
Ga0062590_1002328001 | 3300004157 | Soil | MTDHSYHVYVIQGRGQRDYADCQAALAPVPARMTALPFIATEDEMIAKTRDADALVTSASPVTRGVMSALEGL |
Ga0062594_1006488712 | 3300005093 | Soil | MTDKPYHVYVIQGRGQRDYADCQAALAHVPARMTALPFIGTEDELIAKTRDADGLVISSSPVTRAVMSALEGLK |
Ga0066674_102575662 | 3300005166 | Soil | MVDRSYRVYVVQGQVERDWSDCQAALDGVPARVTTLPFVADPDVLIARARDADALVDVFSPITRGVMSALEGLKTVVRT |
Ga0066678_103072962 | 3300005181 | Soil | MVDRSYRVYVVQGQVERDWSDCQAALDGVPARVTTLPFVADPDVLIARARDADALVDVFSPITRGVMSALEGLK |
Ga0066678_104444901 | 3300005181 | Soil | MTAPPQVYVIQGQTERDWSDCQAALAHVPARMTALPFIGDPDALIARTRDA |
Ga0066676_109842201 | 3300005186 | Soil | MTDKPFHVYVIQGRGEMDYSDCQAALTRVPATMTALPFLGTEDEVIARTRDA |
Ga0066675_102427811 | 3300005187 | Soil | MTAPPQVYVIQGQTERDWSDCQAALAHVPARMTALPFIGDPDALIARTRDADALVVAFSPITRAVMSALEGLKTVVRTGVG |
Ga0065707_106203381 | 3300005295 | Switchgrass Rhizosphere | MIDRTQHVYVIQGRAERDYADCQAAVSHVPARMTALSFIDKEDEVIGRARDADALVVSSTHVTRGVMSALEGLKV |
Ga0066388_1012902821 | 3300005332 | Tropical Forest Soil | MAAQPHVYVIQGRTQQDYTDCQAALAGVPARMTIVPFLATEDEVIAKTRDA |
Ga0066388_1030275382 | 3300005332 | Tropical Forest Soil | MTPTPYQVYVIQGRGQRDYADCQAAIAHVPARLTTLPFIGDEDGVIARTRDADAIVTSS |
Ga0070711_1001467934 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MTDRTQHVYVIQGRAERDYADCQAAVAHVPARMTALSFLDKEDDVIGRARDADALVV |
Ga0070705_1001074191 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | MTDRTQHVYVIQGRAERDYADCQAAVSHVPARMTALSFIDKEDEVIGRARDADALVV |
Ga0070700_1018664002 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MAAQPHVYVIQGRTQQDYADCQAALAGVPARMTILPFLATEDEVIAKTRDADAIVVVYSPITRGV |
Ga0070708_1019271452 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MTDQPYHVYVIQGRGQGDYADCQAALARVPARMTALPFIGDENELIARTRDADALVVTYSPVTRGVM |
Ga0066686_100949011 | 3300005446 | Soil | MTTDRPYHVYVIQGRGQRDSADCQAALAHVPATMTALPFIGTENELIARTRDADALVTSSSPVTRNVMSALEGLKV |
Ga0070706_1006761131 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MGDRSYRVYVIQGQTERDWSDCQTALASVSARVTALPFIGDPEALIARTRDAD |
Ga0073909_103337202 | 3300005526 | Surface Soil | MTDQSYHVYVIQGRGQRDYADCQAALTAVPARMTALPFIATEDEMIARTRDADALVTSASPVTRGVMSALE |
Ga0070672_1004716111 | 3300005543 | Miscanthus Rhizosphere | VADRPFKVYVIQGRGERNYVDCQTALDRVPAQMISLPFIGDADEVIARTRDADALIISSSPVTRRVMEALEGVKAVMR |
Ga0070704_1013256831 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | MAAQPHVYVIQGRTQQDYADCQAALAGVPARMTILPFLATEDEVIAKTRDADA |
Ga0066701_103916362 | 3300005552 | Soil | MPDKPAQVYVLQGRTQRDYSDCQAAMAHVPARMTVLPYIATEDEMIARTRDADALVVSFAPIT |
Ga0066701_107998382 | 3300005552 | Soil | MPDRPYHVYVIQGRGQRDYADCQAALAHVPARMTTLPFIGKEEEVIDRTRDADALVVS |
Ga0066706_101130863 | 3300005598 | Soil | MTDQAFHVYVVRGRGERDYADCQAAIAHVPARMTSLPFIGDENELIARTRDADAMVV |
Ga0066706_110106581 | 3300005598 | Soil | MTAPPQVYVIQGQTERDWSDCQAALAHVPARMTALPFIGDPDALIARTRDADALVVAFSPITR |
Ga0066903_1053371782 | 3300005764 | Tropical Forest Soil | MPDRPYQVYVIQGRGQRDYADCQAALAHVPARMTALPFLGKEDEVIGRTRDADAIVVSSSPITRGVMSALEGLK |
Ga0066903_1067770151 | 3300005764 | Tropical Forest Soil | MTDRTPQVYVIQGRTERDYADCQAAIAHVPAHLTTLPFLDNEYEVVGRARDAD |
Ga0074473_102103242 | 3300005830 | Sediment (Intertidal) | MTGQPSHVYVFQARTERDYADCQAALAPVPARVTVLPFLADEAAVIARARDADAMVVSFTPITRGVM |
Ga0075297_10067481 | 3300005878 | Rice Paddy Soil | VSDRPLTVYVIQGRGQRDYADCQAALDRVPARMVSLPFIGDAAEVIEHARDADALVVSSSPVTRRVME |
Ga0070715_100699811 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MTDRTQHVYVIQGRAERDYADCQAAVAHVPARMTALSFLDKEDEVIGRARDADALVVSST |
Ga0075422_101336162 | 3300006196 | Populus Rhizosphere | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDADALVTSASPVTRSVMSALEGLKVVA |
Ga0066659_114356391 | 3300006797 | Soil | MTDKPFHVYVIQGRGEMDYSDCQAALTRVPATMTALPFLGTEDEVIARTRDADALVVS |
Ga0079221_105954931 | 3300006804 | Agricultural Soil | MTDKPAQVYVLQGRTQRDYSDCQAAMAHVPARMTVLPYIATEDETIARTRDADALVVSFAPITRGVMSAL |
Ga0075428_1002485193 | 3300006844 | Populus Rhizosphere | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDADALVTSASPVTRSVMS |
Ga0075421_1018631162 | 3300006845 | Populus Rhizosphere | MPARPSHVYVVQGRGQRDYAECQAALDRVPAKMTSLPFIDDAAELIDKTRDADGLIVAASPVTRDVMSALEGLKV |
Ga0075421_1018770291 | 3300006845 | Populus Rhizosphere | MTQKALQVYVIQGRSDRDYSACRTALAGVPAQVEVLPFLGTPEEVIAHTRDADGLVVSSSPITRQVLNA |
Ga0075421_1025888231 | 3300006845 | Populus Rhizosphere | MTDKSYHVYVIQGRGQRDYADCQAALASVPAKMTALPFIGTEDELIAKTRDADGLV |
Ga0075433_100394881 | 3300006852 | Populus Rhizosphere | MAAQPHVYVIQGRTQQDYSDCQAALAAVPARMTILPFLATEDEVIAKTRDADAIVVV |
Ga0066797_11707191 | 3300006864 | Soil | MTDKIQQVYVIQGRGQRDYSDCQTALAQLPARVTLLPFIATEEEVIARARDAAALVVTSSPISRKVMSALEDLKVVVRTG |
Ga0075434_1008085512 | 3300006871 | Populus Rhizosphere | MAAQPHVYVIQGRTQQDYADCQAALAGVPARMTILPFLATEDEVIAKTRDADAIVVVYSPIT |
Ga0075434_1020384411 | 3300006871 | Populus Rhizosphere | MVDRSYRVYVIQGQTERDWRDCQAALGHIPARMTALPYIGDADALIARTRDADALVVAFSPITRAVMSALEGLKT |
Ga0075429_1014499242 | 3300006880 | Populus Rhizosphere | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDADA |
Ga0075419_106191772 | 3300006969 | Populus Rhizosphere | MAAQPHVYVIQGRTQQDYSDCQAALAAVPARMTILPFLVTEDEVIAKTRDADAIVVVY |
Ga0075419_107516422 | 3300006969 | Populus Rhizosphere | QGRGQRDYSDCQAALAHVPARMTALPFLCTEDEVIAKTRDADALVTSASSVTRSVMSARGSRSWRAPGWATTSSRA* |
Ga0079218_102275971 | 3300007004 | Agricultural Soil | MPDQSYHVYVIQARTERDYADCEAALAHVPARVTVLPSTTDPEEVSTRTRDADALVVSFAPVNRRVLSALEGLKTVV |
Ga0075435_1000911833 | 3300007076 | Populus Rhizosphere | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDADALVTSASPVTRSVMSALEGLKVVARTGWATTSSRA* |
Ga0099794_101923422 | 3300007265 | Vadose Zone Soil | MTERTQHVYVIQGRSERDYADCQAAVAHVPARMTALSFIDKEDEVIGRARDADALVV |
Ga0099794_103653353 | 3300007265 | Vadose Zone Soil | MTAKPSQVYVIQARGERDWGDCQAALAHVPARVTVLPFIGDAEEVVARTRDADALVVAFSPINRRV |
Ga0066710_1014017231 | 3300009012 | Grasslands Soil | MVDRSYRAYVIQGQTERDWSDCQAALTDVPARVTALLFIGDPDVLIARARDADALVVAFSPITR |
Ga0066710_1038369171 | 3300009012 | Grasslands Soil | MVDRSYRVYVVQGQVERDWSDCQAALDGVPARVTTLPFVADPDVLIARARDADALVDVFSPITRGVMSALEGLKTVV |
Ga0066710_1042390492 | 3300009012 | Grasslands Soil | MTDQAFHVYVIQGRGERDYADCQAAIAHVPARMTSLPFIGDENELIARTRDADAMVVVSSPV |
Ga0066710_1043964991 | 3300009012 | Grasslands Soil | MTDRFHHVYVIQGRNPADYADCQAALAPVGARMTVLPFIPDEGEVIARTRDADALIVVYSPM |
Ga0099830_108295382 | 3300009088 | Vadose Zone Soil | MTDKPYHVYVIQGRGQHDYADCQAALARVPARMTALPFIGDENELIARTRDADALVVTYSPVTRGVMG |
Ga0066709_1023146141 | 3300009137 | Grasslands Soil | MTAQPQVYVIQGQTERDWSDCQAALAHIPARMTSLPFIGDPATLIARTRDPDALVVAFS |
Ga0066709_1040482881 | 3300009137 | Grasslands Soil | MTSRPYHVYILQGRGQRDYADCQAALAHVPARMTTLPFLGKEDEVIDRTRDADAIVVSSSPITRNVMS |
Ga0099792_106132322 | 3300009143 | Vadose Zone Soil | VSDRPLKVYVIQSRSERDYADCQAALDRVPAQLVSLPFIGAPDEVIGRARDADALIISSS |
Ga0111538_120181322 | 3300009156 | Populus Rhizosphere | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDAD |
Ga0105249_111461211 | 3300009553 | Switchgrass Rhizosphere | MTDQSYHVYVIQGRGQRDYADCQAALTVVLARMIVLSFIAIEDEMIARIRDADALVTSASPVTRSVM |
Ga0126374_102680821 | 3300009792 | Tropical Forest Soil | MTDRTQHVYVIQGRAERDYSDCQAAVAHVPARLTTLSFLDKEDEVIGRARDADALIISSTPVTRG |
Ga0105062_11318841 | 3300009817 | Groundwater Sand | MTDQPYHVYVVQGRGQHDYADCQAALARVPARMTALPFIGSEDEMIARTRD |
Ga0105068_10355521 | 3300009836 | Groundwater Sand | MTDQPYHVYVVQGRGQHDYADCQAALARVPARMTALPFMGDEDEIIASTRD |
Ga0126380_103757722 | 3300010043 | Tropical Forest Soil | MTDRTQHVYVIQGRAERDYSDCQAAVAHVPARLTTLSFVDKEDEVIGRARDAD |
Ga0126380_106198592 | 3300010043 | Tropical Forest Soil | MTDRTSHVYVIQGRAERDYADCQAAVAPARLTTLSFLDKEDEVIGRARDADALIVSSTPVTRGVMSALEGLKV |
Ga0126384_101231673 | 3300010046 | Tropical Forest Soil | VIQGQTERDWSDCQAALAQVPARMTALPYIGDPDALIARTRDA |
Ga0134088_105119651 | 3300010304 | Grasslands Soil | MTDHPYHVYVILGRGQHDYADCQAALDRVPARMTALPFIGDENELIARACDADA |
Ga0134084_102671451 | 3300010322 | Grasslands Soil | MVDRSYRVYVVQGQVERDWSDCQAALDGVPARVTTLPFVADPDVLIARARDADALVDVFS |
Ga0126370_111870941 | 3300010358 | Tropical Forest Soil | MTDRTQHVYVIQGRAERDYSDCQAAVAHVPARLTTLSFLDKEDEVIGRARDADALIISSTPVTR |
Ga0126376_109899931 | 3300010359 | Tropical Forest Soil | MAAQPHVYVIQGRTQQDYTDCQAALAGVPARMTIVPFLATEDEVIAKTRDADAIVDVYSPITRAVMSALEGLKT |
Ga0126372_125654872 | 3300010360 | Tropical Forest Soil | MTDRTQHVYVIQGRAERDYSDCQAAVAHVPARLTTLSFLDKEDDVIGRARDADALIISSTPVTRGVMSALE |
Ga0136847_125209291 | 3300010391 | Freshwater Sediment | MTDQPYHLYVIQGRGPRDYADRQAAVAHVPARMTTLPFIGNEDEVIARTRDADAMVVSSTPVTRGVMSALEGLKVV |
Ga0134127_101540313 | 3300010399 | Terrestrial Soil | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDADAIVVVYSPITRGVMSALEGLK |
Ga0134127_130779401 | 3300010399 | Terrestrial Soil | MTDRTQHVYVIQGRAERDYADCQAAVSHVPARMTALSFLDKEDDVIGRARDADALVVSSTHVTRGVMGALEGLKVVV |
Ga0134122_104706211 | 3300010400 | Terrestrial Soil | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDADALVTSASPVTRSVMSAL |
Ga0134123_100162446 | 3300010403 | Terrestrial Soil | MAAQPHVYVIQGRTQQDYADCQAALAGVPARMTILPFLATEDEVIAKTR |
Ga0134123_133227962 | 3300010403 | Terrestrial Soil | VSDRPLKVYVIQSRSERDYAECQAALDRVPAQLVSLPFIGAPDEVIARAREADALIISSSPVTRRVMESL |
Ga0134123_135562771 | 3300010403 | Terrestrial Soil | MTDRTQHVYVIQGRAERDYADCQAAVAHVPARMTALSFLDKEDDVIGRARD |
Ga0137315_10591451 | 3300011395 | Soil | VSDRPLKVYVIQSRSERNYADCQAALERVPAQLVSLPFIGDPDELIARA |
Ga0137446_10993622 | 3300011419 | Soil | VSDRPLKVYVIQSRSERNYADCQAALERVPAQLVSLPFIGDPDELIARARDADALIISSS |
Ga0137452_10186101 | 3300011441 | Soil | MPDQPYQVYVVQGRATRDFVDCQAALADVPARMTSVPFIGTEDEMIARTRDADALVTSSSPVT |
Ga0137461_11232411 | 3300012040 | Soil | VSDRPLKVYVIQSRSERDYADCQAALDRVPAQLVSLPFISDPDAVIARARDADALIISSSPVTRRVMEA |
Ga0137389_101357221 | 3300012096 | Vadose Zone Soil | MNDKSPHAYVIQGRGQRDYADCVAALAAVSARTTVLPFIGDEDELISRTRDADALVTSAS |
Ga0137388_109878414 | 3300012189 | Vadose Zone Soil | MNDTSPHVYVIQGRGQRDYADCAAALATVPARTTVLPFIGGEDELISR |
Ga0137382_108905362 | 3300012200 | Vadose Zone Soil | MTAPPQVYVIQGQTERDWSDCQAALAHVPARMTALSFIGDPAALIARTRDADALVVAFSPITRAVMSAL |
Ga0137365_112422721 | 3300012201 | Vadose Zone Soil | MTDRTQHVYVIQGRAERDYADCQAAVAHVPARMTALSFIDREDEVIGRARDADALVVSSTHVT |
Ga0137399_108598972 | 3300012203 | Vadose Zone Soil | MTDKPFHVYVIQGRGEMDYSDCQAALTRVPAKMTALPFLGTEDEVIARTRDADALVVSFSPVT |
Ga0137380_106543532 | 3300012206 | Vadose Zone Soil | MAAQSHVYVIQGRAQQDYSDCQAALAGVPARMTTLPFIANEGELIAKTRDADAL |
Ga0137377_102747441 | 3300012211 | Vadose Zone Soil | MTDQAFHVYVVQGRGERDYADCQAAIAHVPARMTSLPFIGDENELIARTRDADAMVVVSSPVTRNVMSALEG |
Ga0137447_11099201 | 3300012226 | Soil | VSDRPLKVYVIQSRSERNYADCQAALERVPAQLVSLPFISDADEVIARARDADALIISSSPVTRRVMESLEGLKA |
Ga0137370_100998552 | 3300012285 | Vadose Zone Soil | VYVIQGQTERDWSDCQAALAAVPARLLALPFTGDPDTLIARTRDADALV |
Ga0137387_107865651 | 3300012349 | Vadose Zone Soil | MTDKPYHVYVIQGRGQGDYADCQAALARVPARMTALPFIGNEDEMIARTRDADALVIVFSPVTRGVMG |
Ga0137372_106944142 | 3300012350 | Vadose Zone Soil | MTDRSQHVYVIQGRNPADYADCQAALAPVGARMTVLPFIPDEGEVIARTRDADALIVVYSPM |
Ga0137367_100348291 | 3300012353 | Vadose Zone Soil | MTDQAYHVYVIQGRGQHDYADCQAALARVPARMTALPFIGSEAEMIARTRDADALVVVFSPVTRGVMGALEGLKVVV |
Ga0137371_107526261 | 3300012356 | Vadose Zone Soil | VYVIQGQTERDWRDCQAALAAVPARLIALPFTGDPDTLIARTRDADALVIAFSPVTRAVMSALEGLKTV |
Ga0137368_107076722 | 3300012358 | Vadose Zone Soil | MPDQPYQVYVIQGRGQRDYADCQAALAHVPARMTALPFIGDEDELIARARDASGSWNDSERP |
Ga0137390_101021151 | 3300012363 | Vadose Zone Soil | MTDQPYHVYVIQGRGQHDYADCQAALARVPARMTALLFIGDENELIARTRDADALVVTYSPVTRGVMGALEGLKVVV |
Ga0137390_112766191 | 3300012363 | Vadose Zone Soil | MNDTSPHAYVIQGRGQRDYADCVAALATVPARTTVLPFIGDEDELINRTRDADALVTSAS |
Ga0137358_106678141 | 3300012582 | Vadose Zone Soil | MTAQPHVYVIQARGERDWSGCQAALAPVPARVTVLPFVGDPDELIARTRDADALVVAFSPITRAVMSA |
Ga0137358_110453071 | 3300012582 | Vadose Zone Soil | MTSRPYHVYVIQGRGQRDYADCQAALAHVPARVTTLPFLGKEDEVIDRTRDADAIVVSSSPITRNVMSA |
Ga0137397_113297182 | 3300012685 | Vadose Zone Soil | MTDRSPHVYVIQGRNPADYADCQAALAPVGARMTVLPFIPDEGEVIARTRDA |
Ga0137394_103960061 | 3300012922 | Vadose Zone Soil | MTDQSYHVYVIQGLGQRDYADCQAALTAVPARMTALPFIATEDEMIVKTRDADALVTSASPVTRGV |
Ga0137419_103902591 | 3300012925 | Vadose Zone Soil | MTAQPHVYVIQARGERDWSDCQAALAPVPARVTVLPFVGDPDELIARTRDADALVVAFSPITRA |
Ga0137419_119551691 | 3300012925 | Vadose Zone Soil | MTTRTAHVYVVQGRGQRDYSDCQAALDRVPARMTTLGLIETEDELIAKARDADGL |
Ga0137416_113423422 | 3300012927 | Vadose Zone Soil | MTAQPHVYVIQARAERDWSDCQAALAPVPARVTVLPFVGDPDELIARTRDAD |
Ga0137407_114921991 | 3300012930 | Vadose Zone Soil | MTAQPHVYVIQGQTERDWSDCQAALAHVPARMTALPFIGDPDALIARTRDAEALVVAFSPITRAV |
Ga0126375_106007581 | 3300012948 | Tropical Forest Soil | MTDRTPHVYVIQGRTERDYADCQAAVAPARLTALSFLDKEDEVIGRARDADALIVSSTPVTRGVMSALEGLKVV |
Ga0126375_108157412 | 3300012948 | Tropical Forest Soil | MAAQPHVYVIQGRTQQDYADCQAALARVPARMTTLPFLATEDEVIAKTRDADAIVVVYSP |
Ga0164303_106861692 | 3300012957 | Soil | MTDRTQHVYVIQGRAERDYADCQAAVSHVPARMTALSCIDKEDEVIGRARDADALVVSSTHVTRGVMGALEGLKVVVRT |
Ga0126369_109241211 | 3300012971 | Tropical Forest Soil | MAAQPHVYVIQGRTQQDYTDCQAALAGVPARMTIVPFLATEDEVIAKTRDADAIV |
Ga0134077_104061451 | 3300012972 | Grasslands Soil | MTDHPYHVYVILGRGQHDYADCQAALDRVPARMTALPFIGDENELIARACDADALVVTFSPVTR |
Ga0134077_104993242 | 3300012972 | Grasslands Soil | MTDQAFHVYVIQGRGERDYADCQAAIAHVPARMTSLPFIGDENELIARTRDADAMVVV |
Ga0157378_133033751 | 3300013297 | Miscanthus Rhizosphere | MTDRTQHVYVIQGRAERDYADCQAAVAHVPARMTALSFLDKEDDVIGRARDADALVVSSTHVTRGVMGALEGL |
Ga0157375_112960721 | 3300013308 | Miscanthus Rhizosphere | MTDQSYHVYVIQGRGQRDYADCQAALTAVPARMTALPFIATEDEMIARTR |
Ga0134081_100612521 | 3300014150 | Grasslands Soil | MTSRPYHVYVLQGRGQRDYADCQAALAHVPARMTTLPFLGKEDEVIDRTRDADAIVVSSSPITRNV |
Ga0134081_104038431 | 3300014150 | Grasslands Soil | MTARPYHVYVIQARGERDFSDCQAALAHVPARMSALPFIGDADELMARTR |
Ga0134075_104278191 | 3300014154 | Grasslands Soil | MTDQPFHVYVIQGRGLRDFGDCQAALDHVPARMLSLPYIAAEDELIARARDADALVVSFSPVTRGVMSAIEGLKTVVRTGV |
Ga0134078_104520642 | 3300014157 | Grasslands Soil | MTARPYHVYVIQARGERDFSDCQAALAHVPARMSALPFIGDADELIARTRDAD |
Ga0157380_104040811 | 3300014326 | Switchgrass Rhizosphere | MTDQSYHVYVIQGRGQRDYADCQAALTAVPARMTALPFIATEDEMIAKT |
Ga0137405_10969481 | 3300015053 | Vadose Zone Soil | MTAEPRVYVIQGQTERDWSDCQAALAHVPARMTALPFIGDPDALIARTRDAEARGARRRVLADHAR |
Ga0137420_10317441 | 3300015054 | Vadose Zone Soil | MTAQPHVYVIQARGERDWSDCQAALAPVPARVTVLPFVGDPDELIARTRDADALVVAFSPITRAVMSALEGCRDERARGPQ |
Ga0180075_10983082 | 3300015252 | Soil | VADRPFKVYVIQGRGERDYADCQTALDRVPARMISLPFIGDADEVIARTRDADALVISSSPVTRRVMEA |
Ga0137403_100430061 | 3300015264 | Vadose Zone Soil | MTAEPRVYVIQGQTERDWSDCQAALAHVPARMTALPFIGDPDALIARTRDAEALVVAFSPITRAVMSAL |
Ga0137403_106771931 | 3300015264 | Vadose Zone Soil | MTATPYHVYVIQAPGERDWADCQAALAHVPARTTVLPFIGDADELIARTRDAEALVVAFSPITRAVMSAL |
Ga0134085_101912352 | 3300015359 | Grasslands Soil | MLLDPQPGAIMTDQAFHVYVIQGRGERDYADCQAAIAHVPARMTSLPFIGDENELIARTRDADAMVVVSSPMTRNVMSALEGLK |
Ga0132256_1016700651 | 3300015372 | Arabidopsis Rhizosphere | MTDQSYHVYVIQGRGQRDYADCQAALTAVPARMTALPFIATEDEMIARTRDADA |
Ga0132255_1019631611 | 3300015374 | Arabidopsis Rhizosphere | MTDQSYHVYVIQGRGQRDYADCQAALTAVPARMTALPFIATEDEMIARTRDADALVTSASPFTRSVMSAL |
Ga0134074_10584011 | 3300017657 | Grasslands Soil | MVDRSYRVYVVQGQVERDWSDCQAALARVPARLTALPFIGDPDELIARTRDADALVV |
Ga0134074_13399911 | 3300017657 | Grasslands Soil | MTSRPYHVYVLQGRGQRDYADCQAALAHVPARMTTLPFLGKEDEVIDRTRDADAIV |
Ga0184634_103961881 | 3300018031 | Groundwater Sediment | MTDQPPHVYVIQGRGQRDYADCQAALVQVPARMTALPFIGSEDEVIARTRDADALVVSSTPVTRGVMSALEG |
Ga0184638_10036917 | 3300018052 | Groundwater Sediment | MTDQPYHVYVIQGRGQQDYADCQAALAGVPARMTALPFLGSEDEVIARTRDADALVVTF |
Ga0184615_101591743 | 3300018059 | Groundwater Sediment | VSDRPLKAYVIQSRSERDYADCQAALDRVPAQLVSLPFIGAPDELIARARDADALIISSSPVTRRGID |
Ga0184629_105031542 | 3300018084 | Groundwater Sediment | VSDWPLKVYVIQSRSERNYADCQAALDRVPAQLVSLPFISDPDEVIARARDADALIISSSPVTRRVMESLEGLKAVMR |
Ga0190265_119177392 | 3300018422 | Soil | VSERPLKVFVIQSRSERDYADCQAAIDRVPAQLVSLPFISDPDEVIARARDADALIISASPV |
Ga0190272_112766212 | 3300018429 | Soil | MPDQPYQVYVVQGRGARDFSDCQAALDEVPARMTSLPFIGTEDEMIARTRDADALVISSSPVTRGVMGALEGLKVVART |
Ga0193723_11940032 | 3300019879 | Soil | VSDRPLKVYVIQSRSERNYADCQAALDRVPAQLVSLPFISDPDEVIARARDADALIISS |
Ga0193728_11392032 | 3300019890 | Soil | VPDKTSPDKTPPDKTPKVYVIQGRGQRDYADCQTALDRVPARMESVPFIGDAVEVIERTRDADALIISSSPVTRRVMESLEG |
Ga0180113_11172742 | 3300020065 | Groundwater Sediment | MPDLPYQVYVVQGRATRDFVDCQAALADVPARMTSVPFIGTEDEMIARTRDADALVMSSSPVTRGVMGALEGLKVVAR |
Ga0179594_100551823 | 3300020170 | Vadose Zone Soil | MAAQPHVYVIQGRAQQDYSDCQAALAGVPARMTTLSFIATEDELIAKTRDADALVVVYSPITRAV |
Ga0210382_102533413 | 3300021080 | Groundwater Sediment | MPDQPYHVYVIQARTERDYGDCQAALAHVPARVTVLPSTTDPEEVVARTRDADAL |
Ga0210377_103979371 | 3300021090 | Groundwater Sediment | MTDQPYHVYVIQARAERDFADCQAALAHIPARMTALPFMGDEDEIIARARDAD |
Ga0210324_12410021 | 3300021333 | Estuarine | MTDKTQQVYVIQGRGERDYADCQAAVAHVPARMTSLPFLGTEDEVIARARDADALVVVYSPITRGVM |
Ga0126371_102027181 | 3300021560 | Tropical Forest Soil | MTDRTPHVYVIQGRTERDYADCQAAVAPARLTTLPFLDNEYEVVGRARDADALIISSTPVTRGVMSAL |
Ga0222623_102359411 | 3300022694 | Groundwater Sediment | MTDKPYHVYVIQGRGQGDYADCQAALARVPARMTALPFIGSEDEMIARTRDA |
Ga0247752_10241531 | 3300023071 | Soil | MPAQPYQVYVVQGRANRDFADCQAALAEVPARVTSLPFLGTEDEMIARTRDADALVTSSS |
Ga0208079_10353523 | 3300025481 | Arctic Peat Soil | MTDKIQQVYVIQGRGQRDYSDCQTALAQLPARVTLLPFIATEEEVIARARDAAALVVTSSPISRKVMSALEDLKVV |
Ga0210139_10834232 | 3300025558 | Natural And Restored Wetlands | MTDTIQHVYVIQGRGERDYSDCQTAVAHVPARVTTLPFIGTEDEVIARARDADALVIASAPVTRGVMSALEGLKVVV |
Ga0209014_100754862 | 3300025857 | Arctic Peat Soil | MTDKIQQVYVIQGRGQRDYSDCQTALAQLPARVTLLPFIATEEEVIARTRDADALVVTSSPISRK |
Ga0207646_107926122 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MPAQPYQVYVVQGRGARDYSDCQAALAEVPARMTALPFIGTEDEMISRTRDADALVISS |
Ga0207690_113788281 | 3300025932 | Corn Rhizosphere | MTDKPYHVYVIQGRGQRDYADCQAALAHVPATMTALPFIGTEDELIAKTRDADGLVISASPVTRGVMSAL |
Ga0207711_114057562 | 3300025941 | Switchgrass Rhizosphere | MTDRTQHVYVIQGRAERDYADCQAAVSHVPARMTALSFIDKEDEVIGRARDALVVS |
Ga0207712_111253941 | 3300025961 | Switchgrass Rhizosphere | MTDQSYHVYVIQGRGQRDYADCQAALTAVPARMTALPFIATEDEMIARTRDADALVTSASPVTRSVMSALEGLKVVARTGWATTSSRA |
Ga0207712_112641122 | 3300025961 | Switchgrass Rhizosphere | MTDRTQHVYVIQGRAERDYADCQAAVAHVPARMTALSFLDKEDDVIGRARDADALVVSSTHVTRGVMG |
Ga0208285_10058072 | 3300026005 | Rice Paddy Soil | VSDRPLTVYVIQGRGQRDYADCRTALDRVPARMVSLPFIADPAELIERARDADALIVSSSPV |
Ga0207675_1001280331 | 3300026118 | Switchgrass Rhizosphere | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDADALVTSAWPVTRSVMSALEGLKVVARTGWATTSSRA |
Ga0209238_12042541 | 3300026301 | Grasslands Soil | MTDKPFHVYVIQGRGEMDYSDCQAALTRVPATMTALPFLGTEDEVIARTRDAD |
Ga0209155_11878702 | 3300026316 | Soil | MTARPYHVYVIQARGERDFSDCQAALAHVPARMSALPFIGDADELMARTRDADALVVAFSPVT |
Ga0209470_13638921 | 3300026324 | Soil | MTDKPFHVYVIQGRGEMDYSDCQAALTRVPATMTALPFLGTEDEVIARTRDADALVVSFSPVTRG |
Ga0257173_10089302 | 3300026360 | Soil | VSDRPLKVYVIQSRSERDYADCQAALDRVPAQLVSLPFISDPDEVIARARDADALIISSSPVTRRVMESLEGLK |
Ga0209059_12614181 | 3300026527 | Soil | MTAQPHVYVIQARGERDWSHCQAALAPVAARVTVLPFVGDPDELIARTRDADALVVAFSP |
Ga0209156_100962413 | 3300026547 | Soil | MVDRSYRVYVVQGQVERDWSDCQAALDGVPARVTTLPFVADPDVLIARARDADALVDVFSPITRGV |
Ga0209161_101647862 | 3300026548 | Soil | MTAPPQVYVIQGQTERDWSDCQAALAHVPARMTALPYIGDPDALIARTRDADALVVAFSPITRAVMS |
Ga0209474_103307372 | 3300026550 | Soil | MTAPPQVYVIQGQTERDWSDCQAALAHVPARMTALPFIGDPDALIARTRDADALVVAFSPITRAVMSALEGLKTVVRTG |
Ga0209897_10245642 | 3300027169 | Groundwater Sand | MTGRSFHVYVIQGRGQSDYSDCAAALAGVPARTTVLPFIGGEDDVIAQTRDADGLVTV |
Ga0209861_10740851 | 3300027332 | Groundwater Sand | MTDQPYHVYVIQGRGQHDYADCQAALARVPARMTALPFIGSEDEMIARTRDADALVVVY |
Ga0209466_10250141 | 3300027646 | Tropical Forest Soil | MTDRTQHVYVIQGRTERDYADCQAAIAHVPAHLTTLSFLDNEYEVVGRARDAD |
Ga0209178_11276652 | 3300027725 | Agricultural Soil | VYVIQGQVERDWSDCQAALDAVPARMTTLPYTADPDALITRTRDADALVVVFSPITRAVMSALEGLK |
Ga0209074_103648931 | 3300027787 | Agricultural Soil | VYVIQGQVERDWSDCQAALDAVPARMTTLPYTADPDALITRTRDADALVVVFSPITRAVMSALEGLKTVV |
Ga0209180_107545521 | 3300027846 | Vadose Zone Soil | VPDKNPPDRTPRVYVIQGRGQRDYADCQTALDRVPARMESVPFMGDAAEVIERTRDAAALIVSSSPVTRRVMESLEGLKVVV |
Ga0209814_104759552 | 3300027873 | Populus Rhizosphere | MTDKPQRVYVIQGRGQRDYADCQSALDRVPATMTALPFIGTEDELIAKTRDADGLVTSASPVTRAVM |
Ga0207428_104258721 | 3300027907 | Populus Rhizosphere | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDADALVTSASPVTRSVTS |
Ga0209868_10200561 | 3300027947 | Groundwater Sand | MTDQPYHVYVVQGRGQHDYADCQAALARVPARMTALPFIGSEDEMIARTRDA |
Ga0209857_10138612 | 3300027957 | Groundwater Sand | MTDQPYHVYVVQGRGQHDYADCQAALARVPARMTALPFIGDENELIARTRDA |
Ga0247821_106596851 | 3300028596 | Soil | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDADALVTSASPVTRSAMSALEGLKVVA |
Ga0307504_104285011 | 3300028792 | Soil | MAAQPHVYVIQGRTQQDYADCQAALAGVPARMTTLPFIASVDELIAKTR |
Ga0247824_104695171 | 3300028809 | Soil | MTDKSYHVYVIQGRGQRDYADCQAALAPVPAKMTALPFIGTEDELIAKARDA |
Ga0247825_109047461 | 3300028812 | Soil | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDADALVS |
(restricted) Ga0255310_101085592 | 3300031197 | Sandy Soil | VSDRPLKVYVIQSRSERDYADCRAALDHVPAQLVSLPFIGAPDEVIARARDADALIISSSPVTRRVMESIEGLKAVMR |
Ga0318516_100932801 | 3300031543 | Soil | MTDRAQHVYVIQGRAERDYSDCQAAVAHVPARLTTLSFVDKEDDVIGRARDADALIISSTPVTRGVMSALEGLKVVVRTG |
Ga0318560_103096582 | 3300031682 | Soil | MTDRAQHVYVIQGRAERDYSDCQAAVAHVPARLTTLSFVDKEDDVIGRARDADALIISST |
Ga0307469_100251771 | 3300031720 | Hardwood Forest Soil | VPDKTPPGKTPKVYVIQGRGQRDYADCQTALDRVPARMESVPFIGDAAEVIERTRDADALIISSSPVTRRVMESLEGLKVVVRTG |
Ga0307469_110405591 | 3300031720 | Hardwood Forest Soil | MAAQPHVYVIQGRTQQDYADCQAALAGVPARMTILPFLATADEVIAKTR |
Ga0307468_1002797321 | 3300031740 | Hardwood Forest Soil | MAAQPHVYVIQGRTQQDYADCQTALAGVPARMTILPFLATADEVIAKTRDADAIVDVYSPITRAVLSALEGL |
Ga0307468_1007031082 | 3300031740 | Hardwood Forest Soil | MTDQSYHVYVIQGRGQRDYADCQAALTAVPARMTALPFIATEDEMIAKTRDADALVTSASPVTRGVMSALE |
Ga0307468_1009528452 | 3300031740 | Hardwood Forest Soil | MTDKPNHVYVIQGMGLRDYDDCAAALAGVAQTTVLPFIGDENELIASTRDADALVTSASPITRGVMS |
Ga0318550_101245591 | 3300031797 | Soil | MTDRAQHVYVIQGRAERDYSDCQAAVANVPAHLTTLSFLDKEDEVIGRARDADALIISSTPVTRGVMS |
Ga0307473_100215151 | 3300031820 | Hardwood Forest Soil | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDADALVTSASPVTRSVMSARGS |
Ga0307473_105174481 | 3300031820 | Hardwood Forest Soil | MSPVHLPAMTPTPYQVYVIQGRGQRDYADCQAAIAHVPARLTTLPFIGDEDGVIARTRDADAIVTS |
Ga0310892_109089511 | 3300031858 | Soil | MTDQSYHVYVIQGRGQRDYSDCQAALAHVPARMTALPFLGTEDEVIAKTRDADALVTSASPVTRSVMSA |
Ga0318536_104129281 | 3300031893 | Soil | MTDRAQHVYVIQGRAERDYADCQAAIAHVPAHLTTLPFLDNEYEVVGRARDADALIVSSTPVTRGVM |
Ga0318522_101081502 | 3300031894 | Soil | MTDRAQHVYVIQGRAERDYSDCQAAVAHVPARLTTLSFVDKEDDVIGRARDADALIISSTPVTRGVMSALEGLKVVVR |
Ga0310897_102835351 | 3300032003 | Soil | MTDKPYHVYVIQGRGQRDYADCQAALAHVPATMTALPFIGTEDELIAKTRDADGLVISAS |
Ga0307411_102304253 | 3300032005 | Rhizosphere | MTQPTQHVYVLQSRAQRDYGDCAAAVAPAKLTTLPFLGTEDEIIAQARDADAII |
Ga0310899_102827011 | 3300032017 | Soil | MTDKPYHVYVIQGRGQRDYADCQAALAHVPATMTALPFIGTEDELIAKTRDADGLVISASPVTRGV |
Ga0318507_100899743 | 3300032025 | Soil | MTDRAQHVYVIQGRAERDYADCQAAIAHVPAHLTTLPFLDNEYEVVGRARDADALIVSS |
Ga0318570_101195931 | 3300032054 | Soil | MTDRAQHVYVIQGRAERDYSDCQAAVAHVPARLTTLSFVDKEDDVIGRARDADALITPRVTGVEEMM |
Ga0307471_1003086793 | 3300032180 | Hardwood Forest Soil | MTDQPYHVYVIQGRGQGDYDDCQAALARVPARMTALPFIGDENELIARTR |
Ga0307471_1003160371 | 3300032180 | Hardwood Forest Soil | MTTRPLKVCVIQGRGQRDYADCQSALDRVPARLESLPFIGDAEEIIQHARDADGLIVSSAPVTRRVMEALE |
Ga0307471_1015624752 | 3300032180 | Hardwood Forest Soil | MTDRPQHVYVIQGRNPTDYADCQAALAAVGARMTVLPFIPDEGEVIARARDADALI |
Ga0307471_1034824302 | 3300032180 | Hardwood Forest Soil | MADRPLKVYVIQGRGQRDYADCQSALDRVPARLESLPFIGEAAEVIARARDADALIISSSPVTRRVM |
Ga0307472_1013389692 | 3300032205 | Hardwood Forest Soil | MTDRTPQVYVIQGRAQRDYADCQAAVAHVPARMTALSFMDKEDEVIGRARDA |
Ga0247829_104889301 | 3300033550 | Soil | MTDKSYHVYVIQGRGQRDYADCQAALAPVPAKMTALPFIGTEDELIAKA |
Ga0364942_0022132_3_206 | 3300034165 | Sediment | MTGQPPHVYVIQGRGQRDYADCQTALAQVPARMTTLPFTGNEDEVIARTRDADALVVSSSPVTRGVMS |
Ga0364931_0034441_2_199 | 3300034176 | Sediment | MTERPPHVYVIQGHGQRDYADCQAALAHVPARVITLPFIGAEAETIAATRDADALVVSATPVTRGV |
Ga0373959_0148141_433_591 | 3300034820 | Rhizosphere Soil | MTDKPYHVYVIQGRGQRDYADCQAALAHVPATMTALPFIGTEDELIAKTRDAD |
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