Metagenome Family F024373

Basic Information
Family ID	F024373
Family Type	Metagenome
Number of Sequences	206
Average Sequence Length	42 residues
Representative Sequence	MMTFTDLASVPSDRLMPFTDQLRLAVAAYLARFKGSSREH
Number of Associated Samples	165
Number of Associated Scaffolds	206

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.73 %
% of genes near scaffold ends (potentially truncated)	86.41 %
% of genes from short scaffolds (< 2000 bps)	90.78 %
Associated GOLD sequencing projects	158
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (76.214 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.786 % of family members)
Environment Ontology (ENVO)	Unclassified (21.845 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.864 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.94% β-sheet: 0.00% Coil/Unstructured: 72.06%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 206 Family Scaffolds
PF09957	VapB_antitoxin	7.77
PF07927	HicA_toxin	3.88
PF08241	Methyltransf_11	3.40
PF07045	DUF1330	2.43
PF00583	Acetyltransf_1	1.94
PF01850	PIN	1.94
PF01152	Bac_globin	1.46
PF00589	Phage_integrase	1.46
PF08734	GYD	1.46
PF11716	MDMPI_N	0.97
PF11225	DUF3024	0.97
PF07883	Cupin_2	0.97
PF01548	DEDD_Tnp_IS110	0.97
PF13649	Methyltransf_25	0.97
PF07931	CPT	0.97
PF08818	DUF1801	0.97
PF03435	Sacchrp_dh_NADP	0.97
PF01966	HD	0.97
PF01402	RHH_1	0.97
PF00400	WD40	0.97
PF10861	DUF2784	0.97
PF02776	TPP_enzyme_N	0.49
PF13563	2_5_RNA_ligase2	0.49
PF06475	Glycolipid_bind	0.49
PF00701	DHDPS	0.49
PF02452	PemK_toxin	0.49
PF13683	rve_3	0.49
PF01872	RibD_C	0.49
PF00753	Lactamase_B	0.49
PF02026	RyR	0.49
PF08240	ADH_N	0.49
PF03682	UPF0158	0.49
PF00083	Sugar_tr	0.49
PF01370	Epimerase	0.49
PF13411	MerR_1	0.49
PF13460	NAD_binding_10	0.49
PF12706	Lactamase_B_2	0.49
PF04978	DUF664	0.49
PF14338	Mrr_N	0.49
PF13360	PQQ_2	0.49
PF01494	FAD_binding_3	0.49
PF07978	NIPSNAP	0.49
PF00805	Pentapeptide	0.49
PF12680	SnoaL_2	0.49
PF03483	B3_4	0.49
PF00293	NUDIX	0.49
PF06224	HTH_42	0.49
PF04199	Cyclase	0.49
PF00196	GerE	0.49

COG ID	Name	Functional Category	% Frequency in 206 Family Scaffolds
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	3.88
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	2.43
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.46
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	1.46
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	0.97
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.97
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.97
COG3896	Chloramphenicol 3-O-phosphotransferase	Defense mechanisms [V]	0.97
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.97
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	0.97
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.49
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.49
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.49
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.49
COG3554	Uncharacterized conserved protein	Function unknown [S]	0.49
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.49
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.49
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.49
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.49
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.49

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.21 %
Unclassified	root	N/A	23.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.21 %
Unclassified	root	N/A	23.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.21 %
Unclassified	root	N/A	23.79 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	63.59 %
Unclassified	root	N/A	23.79 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.49 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	61.65 %
Unclassified	root	N/A	23.79 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.49 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	48.06 %
Unclassified	root	N/A	23.79 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.49 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.79 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	4.85 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.37 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3.40 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.40 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.43 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.91 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.46 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.49 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.49 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.49 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.49 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	0.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.49 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.40 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.43 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.91 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.94 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	1.94 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	1.94 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.49 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.49 %
unclassified Nitriliruptorales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales	0.49 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.49 %
unclassified Actinomycetales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales	0.49 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.49 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.49 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples	0.49 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.49 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.97 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.97 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	0.97 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.40 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.43 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.94 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1.94 %
Actinomycetales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium	0.49 %
Kibdelosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium	0.49 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.49 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	0.49 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.49 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.49 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.49 %
Humibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus	0.49 %
Lentzea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea	0.49 %
Virgisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium	0.49 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	0.49 %
uncultured Corynebacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	0.49 %
Agromyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	0.49 %
Planosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Planosporangium	0.49 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.49 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.97 %
Actinoallomurus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	0.97 %
Thermostaphylospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermostaphylospora	0.97 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.97 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.40 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.43 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.94 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1.94 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.49 %
Amycolatopsis anabasis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis anabasis	0.49 %
Nocardioides gansuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides gansuensis	0.49 %
Lentzea indica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea → Lentzea indica	0.49 %
unclassified Agromyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → unclassified Agromyces	0.49 %
unclassified Humibacillus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → unclassified Humibacillus	0.49 %
Kibdelosporangium persicum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium persicum	0.49 %
Virgisporangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium ochraceum	0.49 %
Actinospica robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	0.49 %
Actinopolymorpha pittospori	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha pittospori	0.49 %
Planosporangium mesophilum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Planosporangium → Planosporangium mesophilum	0.49 %
Actinomycetales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium	0.49 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	0.49 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.49 %
uncultured Corynebacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	0.49 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.49 %
unclassified Cellulomonas	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas	0.97 %
Actinoallomurus bryophytorum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus → Actinoallomurus bryophytorum	0.97 %
Thermostaphylospora chromogena	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermostaphylospora → Thermostaphylospora chromogena	0.97 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.40 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.43 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.94 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1.94 %
Humibacillus sp. DSM 29435	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → unclassified Humibacillus → Humibacillus sp. DSM 29435	0.49 %
Streptomyces sp. PKU-MA01144	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PKU-MA01144	0.49 %
Agromyces sp. Soil535	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → unclassified Agromyces → Agromyces sp. Soil535	0.49 %
Amycolatopsis anabasis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis anabasis	0.49 %
Nocardioides gansuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides gansuensis	0.49 %
Lentzea indica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea → Lentzea indica	0.49 %
Kibdelosporangium persicum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium persicum	0.49 %
Virgisporangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium ochraceum	0.49 %
Actinospica robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	0.49 %
Actinopolymorpha pittospori	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha pittospori	0.49 %
Planosporangium mesophilum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Planosporangium → Planosporangium mesophilum	0.49 %
Actinomycetales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium	0.49 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	0.49 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.49 %
uncultured Corynebacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	0.49 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.49 %
Cellulomonas sp. H30R-01	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. H30R-01	0.97 %
Actinoallomurus bryophytorum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus → Actinoallomurus bryophytorum	0.97 %
Thermostaphylospora chromogena	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermostaphylospora → Thermostaphylospora chromogena	0.97 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.97 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001449\|JGI20208J14878_1015686	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300001593\|JGI12635J15846_10366891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	878	Open in IMG/M
3300005178\|Ga0066688_10631372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	687	Open in IMG/M
3300005332\|Ga0066388_100561345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1770	Open in IMG/M
3300005343\|Ga0070687_101247463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides gansuensis	550	Open in IMG/M
3300005435\|Ga0070714_100053462	All Organisms → cellular organisms → Bacteria	3447	Open in IMG/M
3300005435\|Ga0070714_100560571	Not Available	1094	Open in IMG/M
3300005436\|Ga0070713_101953508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300005437\|Ga0070710_10023197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3258	Open in IMG/M
3300005437\|Ga0070710_10813804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M
3300005456\|Ga0070678_102319559	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005467\|Ga0070706_100429941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1229	Open in IMG/M
3300005536\|Ga0070697_100109024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2305	Open in IMG/M
3300005546\|Ga0070696_101626775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300005614\|Ga0068856_100479057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermostaphylospora → Thermostaphylospora chromogena	1265	Open in IMG/M
3300005764\|Ga0066903_100796932	Not Available	1689	Open in IMG/M
3300005764\|Ga0066903_107473553	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005921\|Ga0070766_10321897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	997	Open in IMG/M
3300006028\|Ga0070717_10587797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1010	Open in IMG/M
3300006175\|Ga0070712_100165868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1710	Open in IMG/M
3300006175\|Ga0070712_100180304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1645	Open in IMG/M
3300006175\|Ga0070712_101000130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	724	Open in IMG/M
3300006175\|Ga0070712_101069478	Not Available	699	Open in IMG/M
3300006175\|Ga0070712_101619589	Not Available	566	Open in IMG/M
3300006237\|Ga0097621_101129029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300006755\|Ga0079222_10047697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1967	Open in IMG/M
3300006806\|Ga0079220_10704023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	743	Open in IMG/M
3300006806\|Ga0079220_12105366	Not Available	505	Open in IMG/M
3300006893\|Ga0073928_10545464	Not Available	825	Open in IMG/M
3300006903\|Ga0075426_10743266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300006904\|Ga0075424_102755885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300007076\|Ga0075435_101369692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300007255\|Ga0099791_10248749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	843	Open in IMG/M
3300009012\|Ga0066710_103028851	Not Available	653	Open in IMG/M
3300009089\|Ga0099828_11741112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300009090\|Ga0099827_10070422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	2697	Open in IMG/M
3300009090\|Ga0099827_11115451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300009174\|Ga0105241_11924523	Not Available	580	Open in IMG/M
3300009176\|Ga0105242_12657897	Not Available	550	Open in IMG/M
3300009520\|Ga0116214_1034848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1817	Open in IMG/M
3300009698\|Ga0116216_10795318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	567	Open in IMG/M
3300009764\|Ga0116134_1254537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300009792\|Ga0126374_10728451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300010043\|Ga0126380_10773613	Not Available	782	Open in IMG/M
3300010046\|Ga0126384_11198098	Not Available	700	Open in IMG/M
3300010046\|Ga0126384_11642410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300010359\|Ga0126376_10581018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1055	Open in IMG/M
3300010360\|Ga0126372_10014986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4347	Open in IMG/M
3300010361\|Ga0126378_12577373	Not Available	581	Open in IMG/M
3300010361\|Ga0126378_12617274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300010361\|Ga0126378_12789423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300010362\|Ga0126377_12476881	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300010366\|Ga0126379_12686626	Not Available	595	Open in IMG/M
3300010373\|Ga0134128_10894105	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300010375\|Ga0105239_11919381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → unclassified Agromyces → Agromyces sp. Soil535	687	Open in IMG/M
3300010379\|Ga0136449_100454070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2247	Open in IMG/M
3300010379\|Ga0136449_102367775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	767	Open in IMG/M
3300010379\|Ga0136449_103204434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	632	Open in IMG/M
3300010396\|Ga0134126_10378972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1646	Open in IMG/M
3300010398\|Ga0126383_11299331	All Organisms → cellular organisms → Bacteria → Terrabacteria group	817	Open in IMG/M
3300012096\|Ga0137389_10765496	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300012096\|Ga0137389_11234842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	640	Open in IMG/M
3300012200\|Ga0137382_10399773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	968	Open in IMG/M
3300012200\|Ga0137382_10945034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300012201\|Ga0137365_11093895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300012206\|Ga0137380_10596959	Not Available	966	Open in IMG/M
3300012207\|Ga0137381_10550323	Not Available	1006	Open in IMG/M
3300012210\|Ga0137378_11141764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	694	Open in IMG/M
3300012351\|Ga0137386_10022352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4285	Open in IMG/M
3300012353\|Ga0137367_10754347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	676	Open in IMG/M
3300012354\|Ga0137366_10380479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1030	Open in IMG/M
3300012357\|Ga0137384_10154772	All Organisms → cellular organisms → Bacteria	1919	Open in IMG/M
3300012960\|Ga0164301_10719724	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300012971\|Ga0126369_12105835	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300012971\|Ga0126369_12418728	Not Available	611	Open in IMG/M
3300012989\|Ga0164305_11491055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha pittospori	599	Open in IMG/M
3300013104\|Ga0157370_10408345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1250	Open in IMG/M
3300013105\|Ga0157369_10759861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermostaphylospora → Thermostaphylospora chromogena	997	Open in IMG/M
3300014968\|Ga0157379_10776318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. H30R-01	903	Open in IMG/M
3300015357\|Ga0134072_10399353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis anabasis	541	Open in IMG/M
3300015372\|Ga0132256_102490657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	619	Open in IMG/M
3300015374\|Ga0132255_102024945	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300015374\|Ga0132255_105950539	Not Available	516	Open in IMG/M
3300016270\|Ga0182036_10283458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus → Actinoallomurus bryophytorum	1253	Open in IMG/M
3300016357\|Ga0182032_11240243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300016422\|Ga0182039_10265643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1405	Open in IMG/M
3300017924\|Ga0187820_1237744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300017926\|Ga0187807_1003521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4798	Open in IMG/M
3300017928\|Ga0187806_1287953	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300017932\|Ga0187814_10066398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1323	Open in IMG/M
3300017943\|Ga0187819_10417381	Not Available	770	Open in IMG/M
3300017943\|Ga0187819_10782681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	536	Open in IMG/M
3300017959\|Ga0187779_10889765	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300017972\|Ga0187781_10266518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1213	Open in IMG/M
3300018007\|Ga0187805_10307923	Not Available	729	Open in IMG/M
3300018013\|Ga0187873_1117838	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300018037\|Ga0187883_10120201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1359	Open in IMG/M
3300018085\|Ga0187772_10393384	Not Available	964	Open in IMG/M
3300018085\|Ga0187772_10403655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	952	Open in IMG/M
3300018085\|Ga0187772_11372886	Not Available	524	Open in IMG/M
3300018085\|Ga0187772_11418952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea → Lentzea indica	516	Open in IMG/M
3300018086\|Ga0187769_11336225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	542	Open in IMG/M
3300020582\|Ga0210395_10562962	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300021171\|Ga0210405_10905772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300021374\|Ga0213881_10051408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1745	Open in IMG/M
3300021404\|Ga0210389_10485043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300021405\|Ga0210387_11480493	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300021406\|Ga0210386_10714955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	863	Open in IMG/M
3300021407\|Ga0210383_11579347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	540	Open in IMG/M
3300021432\|Ga0210384_10497623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1097	Open in IMG/M
3300021433\|Ga0210391_10582829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300021474\|Ga0210390_10889194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300021479\|Ga0210410_11428634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	585	Open in IMG/M
3300022557\|Ga0212123_10103382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	2319	Open in IMG/M
3300025906\|Ga0207699_10797945	Not Available	694	Open in IMG/M
3300025912\|Ga0207707_11413505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300025922\|Ga0207646_11594518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → unclassified Humibacillus → Humibacillus sp. DSM 29435	563	Open in IMG/M
3300025922\|Ga0207646_11930696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	503	Open in IMG/M
3300025928\|Ga0207700_10441834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1145	Open in IMG/M
3300025928\|Ga0207700_11295766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium ochraceum	649	Open in IMG/M
3300025929\|Ga0207664_10193239	Not Available	1753	Open in IMG/M
3300025939\|Ga0207665_10335660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. H30R-01	1138	Open in IMG/M
3300025939\|Ga0207665_11264342	Not Available	589	Open in IMG/M
3300025945\|Ga0207679_11184977	All Organisms → cellular organisms → Bacteria → Terrabacteria group	701	Open in IMG/M
3300026489\|Ga0257160_1105119	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300026551\|Ga0209648_10512004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	689	Open in IMG/M
3300027030\|Ga0208240_1010823	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300027652\|Ga0209007_1189480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	505	Open in IMG/M
3300027655\|Ga0209388_1144268	Not Available	674	Open in IMG/M
3300027725\|Ga0209178_1218943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M
3300027874\|Ga0209465_10140049	Not Available	1199	Open in IMG/M
3300027882\|Ga0209590_10146728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1459	Open in IMG/M
3300028072\|Ga0247675_1033827	Not Available	748	Open in IMG/M
3300028780\|Ga0302225_10229937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	887	Open in IMG/M
3300028824\|Ga0307310_10284334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300029943\|Ga0311340_10805690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	791	Open in IMG/M
3300030056\|Ga0302181_10310143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	698	Open in IMG/M
3300030056\|Ga0302181_10345091	Not Available	652	Open in IMG/M
3300030058\|Ga0302179_10437298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	575	Open in IMG/M
3300030618\|Ga0311354_10727544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	946	Open in IMG/M
3300030706\|Ga0310039_10354831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300031525\|Ga0302326_13619359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	511	Open in IMG/M
3300031549\|Ga0318571_10240553	Not Available	662	Open in IMG/M
3300031549\|Ga0318571_10263604	Not Available	637	Open in IMG/M
3300031561\|Ga0318528_10169293	Not Available	1166	Open in IMG/M
3300031561\|Ga0318528_10506062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	649	Open in IMG/M
3300031561\|Ga0318528_10793689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300031573\|Ga0310915_11172622	Not Available	532	Open in IMG/M
3300031708\|Ga0310686_104913562	Not Available	656	Open in IMG/M
3300031715\|Ga0307476_11028747	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300031718\|Ga0307474_10804109	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300031724\|Ga0318500_10663411	Not Available	530	Open in IMG/M
3300031747\|Ga0318502_10167731	Not Available	1259	Open in IMG/M
3300031748\|Ga0318492_10355655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300031770\|Ga0318521_10822039	Not Available	567	Open in IMG/M
3300031771\|Ga0318546_10957826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Planosporangium → Planosporangium mesophilum	602	Open in IMG/M
3300031771\|Ga0318546_11100292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300031778\|Ga0318498_10128269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1153	Open in IMG/M
3300031797\|Ga0318550_10495468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	590	Open in IMG/M
3300031819\|Ga0318568_10157118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1392	Open in IMG/M
3300031819\|Ga0318568_10683366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium persicum	638	Open in IMG/M
3300031819\|Ga0318568_10834068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571	Open in IMG/M
3300031832\|Ga0318499_10290821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	632	Open in IMG/M
3300031833\|Ga0310917_10552448	Not Available	783	Open in IMG/M
3300031846\|Ga0318512_10384247	Not Available	705	Open in IMG/M
3300031880\|Ga0318544_10032321	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300031890\|Ga0306925_11273758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	732	Open in IMG/M
3300031893\|Ga0318536_10318743	All Organisms → cellular organisms → Bacteria → Terrabacteria group	788	Open in IMG/M
3300031896\|Ga0318551_10134602	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300031910\|Ga0306923_10982798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	918	Open in IMG/M
3300031942\|Ga0310916_11287755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300031942\|Ga0310916_11454941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus → Actinoallomurus bryophytorum	560	Open in IMG/M
3300031981\|Ga0318531_10436500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593	Open in IMG/M
3300032001\|Ga0306922_11789521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300032025\|Ga0318507_10491394	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300032039\|Ga0318559_10144728	Not Available	1077	Open in IMG/M
3300032043\|Ga0318556_10062499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1826	Open in IMG/M
3300032043\|Ga0318556_10747907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M
3300032055\|Ga0318575_10455363	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300032059\|Ga0318533_11143106	Not Available	570	Open in IMG/M
3300032076\|Ga0306924_10659784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1178	Open in IMG/M
3300032076\|Ga0306924_11755838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	648	Open in IMG/M
3300032160\|Ga0311301_10851779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → environmental samples → uncultured Corynebacteriales bacterium	1239	Open in IMG/M
3300032160\|Ga0311301_11166230	All Organisms → cellular organisms → Bacteria → Terrabacteria group	992	Open in IMG/M
3300032160\|Ga0311301_11944391	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300032261\|Ga0306920_100043629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6493	Open in IMG/M
3300032782\|Ga0335082_11474133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	551	Open in IMG/M
3300032805\|Ga0335078_10324458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2057	Open in IMG/M
3300032805\|Ga0335078_10559657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1453	Open in IMG/M
3300032828\|Ga0335080_10920492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PKU-MA01144	895	Open in IMG/M
3300032828\|Ga0335080_11347186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300032892\|Ga0335081_11629798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300032892\|Ga0335081_12157603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300032898\|Ga0335072_10625610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1075	Open in IMG/M
3300032898\|Ga0335072_10817698	Not Available	888	Open in IMG/M
3300032954\|Ga0335083_10099432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2871	Open in IMG/M
3300032955\|Ga0335076_10535565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → unclassified Actinomycetales → Actinomycetales bacterium	1054	Open in IMG/M
3300033158\|Ga0335077_11627927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613	Open in IMG/M
3300033289\|Ga0310914_10881243	Not Available	794	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.26%
Host-Associated	Host-Associated	8.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.44%
Plants	Host-Associated → Plants	8.74%
Aquatic	Environmental → Aquatic	5.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.83%
Freshwater	Environmental → Aquatic → Freshwater	4.85%
Peat	Environmental → Terrestrial → Peat	3.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.94%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.97%
Roots	Host-Associated → Plants → Roots	0.97%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.49%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.80%
Loam	Environmental → Terrestrial → Soil → Loam	15.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.40%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.49%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.49%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.49%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.49%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.97%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.49%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.49%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.49%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.49%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.28%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.37%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.40%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.40%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.97%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.49%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.49%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.49%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.49%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.49%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.49%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.49%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.49%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001449	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F024373

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20208J14878_10156861	3300001449	Arctic Peat Soil	AFVSSDSPVPRADPLRLAVAAYLARFTGSSREHTESE*
JGI12635J15846_103668911	3300001593	Forest Soil	MMTFTELAPAPSDPPEPFTDRLRLAVAAYLARFKGSSREHTE
Ga0066688_106313721	3300005178	Soil	MSFTELAPVPSDPAALFTDRLRLAVAAYLARFKGSSREHTE
Ga0066388_1005613451	3300005332	Tropical Forest Soil	MMNFTELASVPSDPLVPLTDRLRLAVAGNLARFKGSSRYHTESDL
Ga0070687_1012474632	3300005343	Switchgrass Rhizosphere	MMNFPNPASLPSDRPPTFTDQLRLAVAAYLARFKGSSREHTASDLR
Ga0070714_1000534621	3300005435	Agricultural Soil	MMTFSELPPVPSDHLVLLSDQLRLAVAAYLARFKGASRYHT
Ga0070714_1005605713	3300005435	Agricultural Soil	MTTFTQATLTSSDLPEPFTNRLRLGVAAYLARFKGPSRERTCPISSSAGAG
Ga0070713_1019535081	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSGHDDFTELASASSDRLVPFTDQLRLAVAAYLTRFKGSSREHT
Ga0070710_100231973	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MMSFADLPSVPSDDLAPFTDQLRLAVAAYLARFKGASRYHT
Ga0070710_108138041	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MMRFTDLASVPTGLPEPFTDRMRLAVAAYLARFKGSSREHTESD
Ga0070678_1023195592	3300005456	Miscanthus Rhizosphere	MTNFTELPSVPSDHLVPFTDQLRLAVTAYLAAKGSSREHTE
Ga0070706_1004299411	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MMTFTELPSVPSDSLVPFTGQLRLAVAAYLARFKGSSRYHTESDLRC
Ga0070697_1001090242	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MMTFIERASAPSHPPAPFTDQLRLAVAAYLARFKGSSREH
Ga0070696_1016267751	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTNFTELPSVPSDHLVPFTDQLRLAVTAYLALKGSSREHTESDLRCYLA
Ga0068856_1004790573	3300005614	Corn Rhizosphere	MTTFTPLAPVPSDPPGPFIDQLRLAVAAYLARFKG
Ga0066903_1007969321	3300005764	Tropical Forest Soil	MMSFTDLTSVPTDHPAPFTDQLRLAVAAYLARFASSSRQHT
Ga0066903_1074735532	3300005764	Tropical Forest Soil	MMTFTGPPSVPSDSLVPFTDQLRLAVAAYLSRFAGPSREHTEI*
Ga0070766_103218971	3300005921	Soil	MMTFSDLASVPRDPLAPFTASCAWQQPAYLARFKGSSRAHTE
Ga0070717_105877973	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTTFSDLASVPCDPLVPFTDQLLTDQLRLAVAAR*
Ga0075432_101850072	3300006058	Populus Rhizosphere	MLAQCLGMRNFTELPSVPSGHPVPVTDPLRLAVAAYLARFK
Ga0070712_1001658681	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTTFTQLTSASSHPSEPFTDQLRLAVAAYLARFKGS
Ga0070712_1001803042	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMSSTPLVPASSDPPEPFTGQLRLAVAAYLARFTGSSREHTESDLR*
Ga0070712_1010001301	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MATFTELAFASSDPPEPFTDRLRLAVAAYLARFKGSS
Ga0070712_1010694783	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDFTELASAPSPPLAPFTDRLRLAVAAYLARFKGS
Ga0070712_1016195892	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTPFTQMTLTSSGPPEPFTDRLRLAVAAYLARFKGSS
Ga0097621_1011290291	3300006237	Miscanthus Rhizosphere	MMTFTELAQAPSDPPEPFTDRLRLAVAAYLARFKGSS
Ga0079222_100476971	3300006755	Agricultural Soil	MMNSTGLTPNPSDYLVPLTDQLRLAVAAYLARFQGSSRDHTE
Ga0079220_107040231	3300006806	Agricultural Soil	MMTFTQLALTSSGPAEPFTERLRLAVAAYLAGFKGSSREHIESD
Ga0079220_121053661	3300006806	Agricultural Soil	MQTQCLGMRNFTELPSVPSNHLVAFTDQLRLAVAAYLARFK
Ga0073928_105454642	3300006893	Iron-Sulfur Acid Spring	MMTSRGLASVPADAPAPFTDRLWLVVAACLARFKGSSRERAD
Ga0075426_107432663	3300006903	Populus Rhizosphere	MTSSPPALASSDPPGPFTDQLRLAVAAYLARFKGSSREH
Ga0075424_1027558851	3300006904	Populus Rhizosphere	MMNFTELPPVPSDRLVPVTDQLRLAVAAYLARFKGSSREHT
Ga0075435_1013696921	3300007076	Populus Rhizosphere	MKNLTTLGSAVSDPPVPFTDQLRLAVAAYLARFKGS
Ga0099791_102487493	3300007255	Vadose Zone Soil	MMNFPAPAPATFDRSACADPLRLAVAAYLARFKGSSREHTES
Ga0066710_1030288511	3300009012	Grasslands Soil	MTTFTQLTSASSHPAEPFTDQLQRAVAAYLARFKG
Ga0099828_117411121	3300009089	Vadose Zone Soil	MMNFTELASVPSDRPVPLTDQLRLAVAAYLAAGPD
Ga0099827_100704223	3300009090	Vadose Zone Soil	MTNFTEPAPIPSDRPVPFIDRLRLAMAACLARFTGSSREHTESDLR*
Ga0099827_111154511	3300009090	Vadose Zone Soil	MKNFTDLPSVPSDHLVPSTDQLRLAVAAYLARFKGASRYHTESDL
Ga0105241_119245231	3300009174	Corn Rhizosphere	MMSSTDLTFVPADQPAPFTDQLRLAVAAYLARFTGPSRQHTE
Ga0105242_126578971	3300009176	Miscanthus Rhizosphere	MTTFTELASVPSDPMAPFTDQLRLAVAAYLARFKGIS
Ga0116214_10348484	3300009520	Peatlands Soil	MMNLTDLAPEPSDPLAPYTDRLRLAVSAYLARFQGSS
Ga0116216_107953182	3300009698	Peatlands Soil	MMTFTELASVPSGPLALFTDRLRLAVAACLARFKGSSRAHTDR
Ga0116134_12545372	3300009764	Peatland	MTNFTDLVSVPSDPPVPFTDQLRLAVAAYLARFKGASRDHI
Ga0126374_107284512	3300009792	Tropical Forest Soil	MMSFTDLASVPADHPEPFPDQLRLAVAAYLARFTALREPA*
Ga0126380_107736133	3300010043	Tropical Forest Soil	MTNSTKLTSAPSNRPVPFADQLRLAVAAYLARFKGSSRSHTE
Ga0126384_111980982	3300010046	Tropical Forest Soil	MMNLTEPPSVPSGCVVPFTGQLPLAVAACLARFKGCSCEHTESDLGCYLA*
Ga0126384_116424102	3300010046	Tropical Forest Soil	MMSFIDLSSNPSDHLLPRTDQLRLAVAAYLARFKGSSR
Ga0126376_105810181	3300010359	Tropical Forest Soil	MTTFTQLTPASSDPPEPFTDPLRLAVAAYLAPFKGSSREHTE
Ga0126372_100149864	3300010360	Tropical Forest Soil	MMSFTDLTSVPADHPAPLTDQLRLAVAAYLARFTGPTRGHTESDLRC*
Ga0126378_125773731	3300010361	Tropical Forest Soil	MLNLTDLAPVSSDPLAPFTDRLRLAVAAYLTRFKGT
Ga0126378_126172741	3300010361	Tropical Forest Soil	MMNFTDLPSVPSDDLVPFTDQLRLAVAAYLARFKSSSR*
Ga0126378_127894231	3300010361	Tropical Forest Soil	MMTFADQPSPVPSDHLVLLPDQLRLAVAAYLARFTGTSRYH
Ga0126377_124768812	3300010362	Tropical Forest Soil	MMTFTDLASVPSNPLAPFTDRLRLAVAAYLARFKGSSRE
Ga0126379_126866261	3300010366	Tropical Forest Soil	MMSFTDLTSVPTDHPAPFTDQLCLAVAAYLARFASSSRQHTESD
Ga0134128_108941052	3300010373	Terrestrial Soil	MTNFTELPSVPSDHLVPFIDQLRLAVAAYLARFKGSSRYHTESDL
Ga0105239_119193812	3300010375	Corn Rhizosphere	MMTFTELASVPSDPMAPFTDRLRLAVAAYLARFKGISRNRT
Ga0126381_1013399501	3300010376	Tropical Forest Soil	MLNLTDLASAPSDPVVPCTDRLRLAVAAYLARFPGISRNRTESDLRCYLASRAERGPGSACR
Ga0136449_1004540703	3300010379	Peatlands Soil	MMTFTELVPSAGDPPPEPFTDRLRLAVAAYLARFKG
Ga0136449_1023677751	3300010379	Peatlands Soil	MMSFTDLASVPGNSPEPFDDRLRLAVAAYLARFKGSSPRAH*
Ga0136449_1032044342	3300010379	Peatlands Soil	MTTFTQLTPAPSDPPEPFTDRLRLAVAAYLARFKGSS
Ga0134126_103789721	3300010396	Terrestrial Soil	MTTFSVLASVPSDPLVPFTDQLRLAMAAHLARFKGSSREHTESDLRC*
Ga0126383_112993311	3300010398	Tropical Forest Soil	MVNFPDRPSVPADHPALVTDQLRLASAAHLARFTRVLSADTESDLRCHLSWCA
Ga0137389_107654961	3300012096	Vadose Zone Soil	MANFTELTPVPSDRPVPAADPLRLAVAAYLARFKDSSREHTESDLR
Ga0137389_112348421	3300012096	Vadose Zone Soil	MMAFSDLASVPSDPLPPFTDRLRPAPAAYLARFKGS
Ga0137382_103997732	3300012200	Vadose Zone Soil	MMNFTDLASVPSHPLAPFTDRLRLAVAAYLARFKG
Ga0137382_109450341	3300012200	Vadose Zone Soil	MMTFSDLASVPSDPPAPFTDQLRLAVAAYLARFKGSSRE
Ga0137365_110938951	3300012201	Vadose Zone Soil	MMTSTPLAPTLSNPPEPFTDQLRLAAAAYLARFKGSSREHTESDLR
Ga0137380_105969591	3300012206	Vadose Zone Soil	MTNFTELTSVPSDCLEPPLDKLRLAMAAYLARFKGS
Ga0137381_105503231	3300012207	Vadose Zone Soil	MTNFTELASVPSDRPVPHADQLRLAVAAYLARFTGSSREHTESDLRC
Ga0137378_111417643	3300012210	Vadose Zone Soil	MMAFSDLASVPSDPLAPFTDRLRLAAAAYLARFKGSSREHTESD
Ga0137386_100223521	3300012351	Vadose Zone Soil	MTNFTELPSVPSDHLVPFTDQLRLAVAAYLARFKGSSREHT
Ga0137367_107543471	3300012353	Vadose Zone Soil	MLNFTDLASVPSHPLAPFTDRLRLAVAAYLARFSEL
Ga0137366_103804793	3300012354	Vadose Zone Soil	MMTFTDLASVPSDPPAPFTDQLQLAVAAYLASFKGSSREHTESDLRC
Ga0137384_101547723	3300012357	Vadose Zone Soil	MMSFPELPSAPPDHLVPVTDQLRLAVAAYLARFKGSSR
Ga0164301_107197241	3300012960	Soil	MTSTPLVPASSDPPEPFTGQLRLAVAAYLARFTGSSREHTESDLR*
Ga0126369_121058352	3300012971	Tropical Forest Soil	MMNFAELPSVPSDYRVPFTDQLRLRVAAYLARFKGSSRYHTASDLRCYL
Ga0126369_124187282	3300012971	Tropical Forest Soil	MMTFTELAFAPSGLPTPFTGRLRLAVAAYLARFTGPPATAPDAV*
Ga0164305_114910551	3300012989	Soil	MSSTPLVPASSDPPEPFTGQLRLAVAAYLARFTGSSREHTESDLR*
Ga0157370_104083453	3300013104	Corn Rhizosphere	MMTFTELASVPSDPMAPFTDQLRLAVAAYLARFKG
Ga0157369_107598612	3300013105	Corn Rhizosphere	MTTFTPLAPVPSDPPRPFTDQLRLAVAAYLARFKGASREHIESDLR
Ga0157379_107763182	3300014968	Switchgrass Rhizosphere	MMTFTELASAPSDLPVPFTDQLRLAVAAYLGRFKGSSREHTASDM
Ga0134072_103993531	3300015357	Grasslands Soil	GMMTSTSLAPTLFNPPEPFTDQLRPAAAYLARKD*
Ga0132256_1024906571	3300015372	Arabidopsis Rhizosphere	MRAQCLGMMTSKELASAPSDRPMVFTEQLRLAVAAYLARFKGSSRE
Ga0132255_1020249451	3300015374	Arabidopsis Rhizosphere	MMNSTDLSSGPSDYLVPRPDQLRLAVVAYLARFQGSSRDHTESDL
Ga0132255_1059505391	3300015374	Arabidopsis Rhizosphere	MMNFTDIASVPSHPLAPFTDRLRLAVAAYLARFKGTSR
Ga0182036_102834582	3300016270	Soil	MMTFTDLASVPSDPAAPSTDRLRLAVAAYLARFKGSSREHTE
Ga0182032_112402431	3300016357	Soil	MLTVSDLALVPSDPPAPVTDQLRLAAAACLARFKGS
Ga0182039_102656433	3300016422	Soil	MMNSRNLSSDPSDRLAPLTDQLRLAVAAYLARFQGSSRDHT
Ga0187820_12377442	3300017924	Freshwater Sediment	MTTFTELACAPSDPAVPFTDRLRLAVAAYLARFTGSSCEHTESDLRCYLAT
Ga0187807_10035218	3300017926	Freshwater Sediment	MTTFTQLVPAPSDPPEPFTDRLRLAVAAYLARFKG
Ga0187806_12879532	3300017928	Freshwater Sediment	MMTFTELAPAASDPPEPFTDRLRLAVAAYLARFKGSSREHTG
Ga0187814_100663981	3300017932	Freshwater Sediment	FTDLASVPTDPSEPFTDRLRLAVAAYLARFKGFSRQCTESDLRC
Ga0187819_104173812	3300017943	Freshwater Sediment	MSFTDLASVPTDPSEPFTDRLRLAVAAYLARFKGFSRQCTESDLRC
Ga0187819_107826812	3300017943	Freshwater Sediment	MMNSTELASVPSDRPAPFTDQLRLAVAAYLARFKG
Ga0187779_108897652	3300017959	Tropical Peatland	MTNLTTPGPALSSPPVPFTDQLRLAVAAYLARFTGS
Ga0187781_102665183	3300017972	Tropical Peatland	MTTFTQLTSTPSCPPEPFTDQLRLAVAAYLARFKG
Ga0187805_103079231	3300018007	Freshwater Sediment	LASLSPDPAAPFTDRLRLAVAAYLARFKGSSRERRF
Ga0187873_11178381	3300018013	Peatland	MQTQRQFMMNSPDLVSTSSNRLGPFTDQLRLAVAAYLARFRGSSREHTE
Ga0187883_101202011	3300018037	Peatland	MTTFTQLALTSSDPPEPFTDRLRLAVAAYLARFKGAS
Ga0187772_103933842	3300018085	Tropical Peatland	MVNLTDLASAPSDHLAPFTDRLRLAVAAYLARFKGSS
Ga0187772_104036551	3300018085	Tropical Peatland	MHSQDMMTFTELASVPSDPLAPFTDQLRLAVAAYLARF
Ga0187772_113728861	3300018085	Tropical Peatland	MTFSDLASVPPDPPAPFTDRLRLAVAAYLARFKGSSCEHTESD
Ga0187772_114189522	3300018085	Tropical Peatland	MPNFTDLASVPPHPQAPFTDRLRLAVAAHLARFTGSFRRCTESDLRSYL
Ga0187769_113362252	3300018086	Tropical Peatland	MHSQDMMTFTELASVPSDPLAPFTDQLRLAVAAYLARFSELELLPGI
Ga0210395_105629621	3300020582	Soil	MTFTELATVASDPPEPFTDRLRLAVAAYLARFKGSSR
Ga0210405_109057721	3300021171	Soil	MTFSDLASVPSDPLAPFTDQLRLAAVAYLARFKGSSASTPNLTSA
Ga0213881_100514082	3300021374	Exposed Rock	GSQSMMIFSDLASVPCDPLATFTDRLRLAVAAYLARFKGSSRQHAEKWS
Ga0213875_104678792	3300021388	Plant Roots	MRAQCLGMRTTFTDLPSLPSHSLAPFTDQLRLAVAAYLARFHGS
Ga0210389_104850432	3300021404	Soil	MTNFTELASISSGRPGPSADQLRLAVAAYLARFKGSSREHTEPDLRC
Ga0210387_114804931	3300021405	Soil	MTFTELAPAASDPPEPFTDRLRLAVAACQARFKRS
Ga0210386_107149551	3300021406	Soil	MKTFTELTSAPSDLPAPFTDQLRLAVAAYLARFKGSSREHNESEL
Ga0210383_115793472	3300021407	Soil	MTTFTQLTSASSHPPEPFTDQLRLAVGAYLARFKGSSREHTES
Ga0210384_104976231	3300021432	Soil	MMTFSDLASVPCDPLAPFTDQLRLAVAAYLARFKGSSRE
Ga0210391_105828293	3300021433	Soil	MMNFAEPPPTPSDRLVPHGDPLQLAVAAYLARFKGSSRYHTA
Ga0210390_108891942	3300021474	Soil	FTELASISSGRPGPSADQLRLAVAAYLARFKGSSREHTEPDLRC
Ga0210392_107088252	3300021475	Soil	GMLAQRLGMRNFTELPSVPSDHLVAVTEPLRLAVAAYLARFKGVLPRAHRL
Ga0210410_114286341	3300021479	Soil	MSSTPLVPASSDPPEPFTGQLRLAVAAYLARFTGSSREHTESDLR
Ga0212123_101033821	3300022557	Iron-Sulfur Acid Spring	MNRAQCLGMMNFTDLPSVPSDHPAPSTDQLRLAAAAYLTRFTGPSR
Ga0207699_107979451	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MQAQCLGMMTSTALASVPSEGLAPFTNQLQLAVAAYLARFKGSSREHT
Ga0207707_114135052	3300025912	Corn Rhizosphere	MEVAQCLGMMNFTELPPVPSDRLVPVTDQLRLAVAAYLARFKGSSREH
Ga0207646_115945182	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MMNFPDRASIPSDYPAPWTDRLRLAVAAHLARFTG
Ga0207646_119306962	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MMTFTDLASIPSDPLTPFTDQLRLAVAAYLARFKG
Ga0207700_104418342	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MLNLTDLVPAPSDPLAPFTDRLWLAVAAYLARFTGTSRNRTE
Ga0207700_112957662	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTSTPLVPASSDPPEPFTDQLRLAVAAYLARFKGSSREHT
Ga0207664_101932394	3300025929	Agricultural Soil	MMTFSDLASVPSDPLVPFTDQLRLAVAAYLARFKGSSR
Ga0207665_103356601	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTSTPLAPALSNPPEPFTDQLRLAVAAYLARFKGSSREHTES
Ga0207665_112643421	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MNFPDLASLPSDRPATFTDQLRLAMAAYLARFKGSSRYHT
Ga0207679_111849772	3300025945	Corn Rhizosphere	MTSSPLALASSDPPEPFTDQLRLAVAAYLARFKGSS
Ga0257160_11051192	3300026489	Soil	MRNLTDLASVPSGSLAPFTDRLRLAVAAYLARFKGISRNRTESDLR
Ga0209648_105120041	3300026551	Grasslands Soil	MTPFTGLAPAPSDPPEPFADQLRLAVTSCLARFKGSSREHTESDLRCHPSW
Ga0208240_10108232	3300027030	Forest Soil	MMTFTELAPAASDPPEPFTDRLRLAVAAYLACFKGSS
Ga0209007_11894802	3300027652	Forest Soil	MITFTDLASVPSHPSEPFTDRLRLAVAAYLARFKGS
Ga0209388_11442682	3300027655	Vadose Zone Soil	MKSFIDLSSVPSDHLVPSTDQLRLAVAAYLARFKGAS
Ga0209178_12189431	3300027725	Agricultural Soil	MMNFTELASASSDRLVPFTDQLRLAVAAYLTRFKGSSREHTESDLR
Ga0209465_101400491	3300027874	Tropical Forest Soil	MMTFTDLASIPSNDPAPFIDQPRLAVAAYLARFTGSSREHTESD
Ga0209590_101467282	3300027882	Vadose Zone Soil	MTNFTEPAPIPSDRPVPFIDRLRLAMAACLARFTGSSREHTESDLR
Ga0247675_10338271	3300028072	Soil	MEVAQCLGMMNFTELPPVPSDRLVPVTDQLRLAVAAYLARFKGSS
Ga0302225_102299373	3300028780	Palsa	MKTFTELTSAPSDLPAPFTDQLRLAVAAYLARFKGSSREH
Ga0307310_102843343	3300028824	Soil	MTTFSDLASVPSDPLVPFTGQLRLAVAAYLARFKGCS
Ga0311340_108056901	3300029943	Palsa	MTSFTDLASVPGNSPEPFDDRLRLAVAAYLARFKGSSFEHTASDLRCYLA
Ga0302181_103101432	3300030056	Palsa	MMNFTELAPVPHDPLMPFTDQLQLAVAAYLARFKGSSRDHTE
Ga0302181_103450911	3300030056	Palsa	MKHYSELASIPSSNPVPHADPLRLAVAAYLARFKGASRDHTHSDLRC
Ga0302179_104372982	3300030058	Palsa	MMTFSELASAASDLPEPFTDRLRLAVAAYLARFKGSSRAHTE
Ga0311354_107275441	3300030618	Palsa	MMTFSELASAASDLPEPFTDRLRLAVAAYLARFKGSCRAH
Ga0310039_103548311	3300030706	Peatlands Soil	MMDFTELAFAPSPPLAPFTDQLRLAVAAYLARFKGSSREHTES
Ga0302326_136193592	3300031525	Palsa	MNYAELASIPSDHPGPFTDQLRLAVAAYLARFKSTS
Ga0318571_102405532	3300031549	Soil	MMTFTELPSVPSDHLVPFTDQLRLAVAAYLARFTGSSRE
Ga0318571_102636041	3300031549	Soil	MMTFTDLASVPSDRLMPFTDQLRLAVAAYLARFKGSSREH
Ga0318528_101692931	3300031561	Soil	MMSFTDLTSVPADHPAPFTDQLRLAVAAYLARFTGSSRGHT
Ga0318528_105060622	3300031561	Soil	MRNLPELPSAPSDRQVPFTDQLQLVAAAYLGRFNGSSRYHTASDLR
Ga0318528_107936892	3300031561	Soil	MNFPDLVSVPPDHPAPFADQLRLAMSAYLARFTGSSREHTEYD
Ga0310915_111726221	3300031573	Soil	MTTFTQLTSAPSHPPEPFTDQLRLAVAAYLARFKDSSREHTES
Ga0310686_1049135622	3300031708	Soil	MPNFTDLASVSSHPLAPFTDRLQPAVAAYLARCKGAHRRCTESDLRCYLTA
Ga0307476_110287472	3300031715	Hardwood Forest Soil	MVVSRRNLKGMMTFTELTPAASDLPEPFTDRLRLAVAACLARFKGSSRAHTESTSCVGSLVQ
Ga0307474_108041092	3300031718	Hardwood Forest Soil	MVVSRRNLKGMMTFTELTPAASDLPEPFTDRLRLAVAACLARFKGSSRAH
Ga0318500_106634113	3300031724	Soil	MPSIPLVPVSSDPPEPFTGQLRLAAAAYLARFTGSS
Ga0318502_101677311	3300031747	Soil	MMSFTDLTSVPADHPAPFTDQLRLAVAAYLARFTGSSRGHTESDLR
Ga0318492_103556551	3300031748	Soil	MRNFTELACVRSDQPAPCTDQLRLAVAAYLARFQGSSREHTES
Ga0318521_108220392	3300031770	Soil	MMTFTELPSVPSDHLVPFTDQLRLAVAAYLARFTGSSREHPESDLR
Ga0318546_109578262	3300031771	Soil	MTNLTDLPSLPSGRLVPVTDQLRLAVAAYLALEAEHES
Ga0318546_111002922	3300031771	Soil	MMTFTDLASAPSGPVAPFTDRLRLAVSAYLARFKGSSREH
Ga0318498_101282691	3300031778	Soil	MMNSRNLSSDPSDRLAPLTDQLRLAVAAYLARFQGSSRDH
Ga0318550_104954681	3300031797	Soil	MINLTDLASVPSDPLAPFTDRLRLAVAAYLVRFTGSSRRCTES
Ga0318523_105007182	3300031798	Soil	MLNLTDLASVPSAHLAPFTDQLRLAVAAYLTRFTGTSRRCTESDLRCYLA
Ga0318568_101571181	3300031819	Soil	MITFTGLPSVPSDPLVPFTDQLRLAVAAYLSRFTGSSREHTESDLRC
Ga0318568_106833662	3300031819	Soil	MMNFAEQAAVSSDRLVPLTDQLRLAVAAYLARFTGSS
Ga0318568_108340682	3300031819	Soil	MNFPDLVSVPPDHRAPFTDQLRLAMSAYLARFTGS
Ga0318499_102908213	3300031832	Soil	MNFTDLASVPSHALAPFTDRLRLAVAAYLARFSELGRCAR
Ga0310917_105524482	3300031833	Soil	MSFTDLTSVPADHPAPFTDQLRLAVAAYLARFTGSSRGHTESDL
Ga0318512_103842471	3300031846	Soil	MMTFTELPSVPSDHLVPFTDQLRLAVAAYLARFTGSSREHTE
Ga0318495_101133021	3300031860	Soil	MLNLTDLASVPSDSLAPFTDRLRLAVAAYLARFKRISRKSALNSPG
Ga0318544_100323214	3300031880	Soil	MITFTERAPAASDPPEPFTGRLRLAIAAHLARFKGFSR
Ga0306925_112737582	3300031890	Soil	MINLTDLASVPSDPLAPFTDRLRLAVAAYLVRFTGSSRRCTESDLRCYL
Ga0318536_103187431	3300031893	Soil	MMTFTGLPSVPSDDLVPFTAQLRLAVAAYLARFKGSSRQHSESDLRCCLA
Ga0318551_101346021	3300031896	Soil	MTNFTELVPAPSDPAALFTDRLRLAVTAYLARFKGASRQR
Ga0318520_103148223	3300031897	Soil	MLNLTDLASVPSDSLAPFTDRLRLAVAAYLARFKRISRKSALN
Ga0306923_109827981	3300031910	Soil	MNFPDLVSVPPDHPAPFADQLRLAMSAYLARFTGSSRQHTESD
Ga0310916_112877551	3300031942	Soil	MMNLTTLGSAPADPVLFTDRLRLAVAAYLARFKGSSREHTGSDLRC
Ga0310916_114549412	3300031942	Soil	MMTFTDLASVPSDPAAPSTDRLRLAVAAYLARFKG
Ga0318531_104365002	3300031981	Soil	MLNLTDLASVPSAHLAPFTDQLRLAAAAYLTRFTGTSRRC
Ga0306922_117895212	3300032001	Soil	MTFNDLVSAPSGPLAPCTDRLRLAAAAYLARFKGSS
Ga0318507_104913942	3300032025	Soil	RKLAQCLGMMNFPELPSAPPDHPAPFTDQLRLAVAAYLARF
Ga0318559_101447281	3300032039	Soil	MSFTDLTSVPADHPAPFTDQLRLAVAAYLARFTGSSRGHTESDLRC
Ga0318556_100624992	3300032043	Soil	MRNLPELPSAPSDRQVPFTDQLQLVAAAYLGRFNGSSRYHTASDLRCYLADDLGMRPVPE
Ga0318556_107479071	3300032043	Soil	MMTFTELASVPSDPAAPSTDRLRLAVAAYLARFKGS
Ga0318575_104553631	3300032055	Soil	VPGHANLTGLAFVLSDPLAPFTDRLRLAAAACLARFTGIFRHRTESWPPT
Ga0318533_111431063	3300032059	Soil	MMTFTELATVPSDPLAPFTGQLRLAMAAYLVRFMGSSRAHTES
Ga0306924_106597842	3300032076	Soil	MMNSRNLSSDPSDRLAPLTDQLRLAVAAYLARFQGSSRD
Ga0306924_117558381	3300032076	Soil	MNFTDLASVPSHPPAPFTDRLRLAVAAYLARFTGISRNRTESDL
Ga0311301_108517791	3300032160	Peatlands Soil	MQTQRQFMMNSPDLVSTSSDRLGPFTDQLRLAVAAYLARFRGSSRE
Ga0311301_111662301	3300032160	Peatlands Soil	MMNLTDLAPEPSDPLAPYTDRLRLAVSAYLARFQGSSRQRTESDLRCC
Ga0311301_119443912	3300032160	Peatlands Soil	MTTFTQLAPAPSDPPEPFTDRLRLAVAAYLARFKG
Ga0306920_1000436297	3300032261	Soil	MMSFTELPSVPSDDLVPFTAQLRLAVAAYLARFKGSSR
Ga0335082_114741332	3300032782	Soil	MMTFTDLASVPPHPLAPFTDRLRLAVAAYLARFKGSSHEHTQ
Ga0335078_103244584	3300032805	Soil	MKNLTTLGSAPSDPPVPFTDQLRLAVAAYLARFKGS
Ga0335078_105596574	3300032805	Soil	MMTFSDLASVPSDPLVPFTDQLRLAVAAYLALLTELCLEFQQFSG
Ga0335080_109204922	3300032828	Soil	MKNFTGLPAVPSGHLVPSTDRLRLAVAAYLARFKGASR
Ga0335080_113471863	3300032828	Soil	MMTFSDLAAVPPDPPAPFTDQLRLAAAAYLARFKGSSREHTESD
Ga0335081_116297982	3300032892	Soil	MMTFTELAPAASDPSEPFTDRLRLAVAAYLARFKGSSREHTESH
Ga0335081_121576031	3300032892	Soil	MMDFAELASMAADPPTPFTDRLRLPVAAYLARFKGSS
Ga0335072_106256102	3300032898	Soil	MRNFTDLASVPSHHLAPFTDRLRLAVAAYLARFKGSSRL
Ga0335072_108176981	3300032898	Soil	MTSTQLIRTPSDPPEPFTDQLRLAVAAYLARFKGSSREH
Ga0335083_100994325	3300032954	Soil	MITFTDLASVPSHPSEPFTNRLRLAVAAYLARFKG
Ga0335076_105355652	3300032955	Soil	MKNLTTLGSAPSDPPVPFTDQLRLAVAAYLARFKG
Ga0335077_116279271	3300033158	Soil	MRNFTDLASVPSHHLAPFTDRLRLAVAAYLARFKGSS
Ga0310914_108812432	3300033289	Soil	MMTFTDLASVPSDRLMPFTDQLRLAVAAYLARFKGS

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign