Metagenome / Metatranscriptome Family F024133

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F024133
Family Type	Metagenome / Metatranscriptome
Number of Sequences	207
Average Sequence Length	66 residues
Representative Sequence	MQVDLTTEEAATLKGLLRDCIPDLKREIARADDRRFRHELVQREELCERLIARLDGDAARSAPAL
Number of Associated Samples	151
Number of Associated Scaffolds	207

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.16 %
% of genes near scaffold ends (potentially truncated)	27.54 %
% of genes from short scaffolds (< 2000 bps)	84.06 %
Associated GOLD sequencing projects	134
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.754 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.594 % of family members)
Environment Ontology (ENVO)	Unclassified (28.502 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.386 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.84% β-sheet: 0.00% Coil/Unstructured: 45.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.7.8.1: GAT domain	d1j2ha_	1j2h	0.89324
a.7.8.1: GAT domain	d1wrda1	1wrd	0.87848
a.25.1.2: Ribonucleotide reductase-like	d3olja1	3olj	0.86319
a.2.6.1: HR1 repeat	d1cxzb_	1cxz	0.86098
a.25.1.1: Ferritin	d1jiga_	1jig	0.85753

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 207 Family Scaffolds
PF01965	DJ-1_PfpI	14.98
PF03807	F420_oxidored	11.59
PF12867	DinB_2	3.86
PF12796	Ank_2	1.45
PF02163	Peptidase_M50	0.97
PF11219	DUF3014	0.97
PF06736	TMEM175	0.97
PF08494	DEAD_assoc	0.97
PF00571	CBS	0.97
PF00413	Peptidase_M10	0.48
PF07676	PD40	0.48
PF01694	Rhomboid	0.48
PF04216	FdhE	0.48
PF00034	Cytochrom_C	0.48
PF00023	Ank	0.48
PF02225	PA	0.48
PF13418	Kelch_4	0.48
PF01272	GreA_GreB	0.48

COG ID	Name	Functional Category	% Frequency in 207 Family Scaffolds
COG1201	Lhr-like helicase	Replication, recombination and repair [L]	0.97
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.97
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.48
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.48
COG3058	Formate dehydrogenase maturation protein FdhE	Posttranslational modification, protein turnover, chaperones [O]	0.48
COG5549	Predicted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.48

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.75 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.75 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.75 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.32 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.59 %
Unclassified	root	N/A	7.25 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.59 %
Unclassified	root	N/A	7.25 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.86 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.48 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.48 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.59 %
Unclassified	root	N/A	7.25 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.45 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.48 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.48 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.48 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.59 %
Unclassified	root	N/A	7.25 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.48 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.48 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.48 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.48 %
Kallotenuales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.59 %
Unclassified	root	N/A	7.25 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.48 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.48 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.48 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.48 %
Kallotenuaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales → Kallotenuaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.59 %
Unclassified	root	N/A	7.25 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.48 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.48 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.48 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.48 %
Kallotenue	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales → Kallotenuaceae → Kallotenue	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.59 %
Unclassified	root	N/A	7.25 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.48 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.48 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.48 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.48 %
Kallotenue papyrolyticum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales → Kallotenuaceae → Kallotenue → Kallotenue papyrolyticum	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_1981925	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100678586	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100680355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1625	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105417093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1203	Open in IMG/M
3300000559\|F14TC_101466090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1001	Open in IMG/M
3300000953\|JGI11615J12901_11562241	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300000955\|JGI1027J12803_108941994	Not Available	800	Open in IMG/M
3300004019\|Ga0055439_10005582	All Organisms → cellular organisms → Bacteria	2605	Open in IMG/M
3300004114\|Ga0062593_100026863	All Organisms → cellular organisms → Bacteria	3188	Open in IMG/M
3300004114\|Ga0062593_100056390	All Organisms → cellular organisms → Bacteria → Proteobacteria	2493	Open in IMG/M
3300004114\|Ga0062593_101481784	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300004156\|Ga0062589_100877481	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300004157\|Ga0062590_101039231	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300004479\|Ga0062595_100555656	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300004479\|Ga0062595_101961330	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300004479\|Ga0062595_102286714	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300004480\|Ga0062592_101997690	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300004798\|Ga0058859_11467563	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300004801\|Ga0058860_11805694	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300004803\|Ga0058862_12391981	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300005093\|Ga0062594_100004571	All Organisms → cellular organisms → Bacteria → Proteobacteria	4151	Open in IMG/M
3300005167\|Ga0066672_10794482	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005289\|Ga0065704_10038735	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300005293\|Ga0065715_10263049	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300005293\|Ga0065715_10846043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M
3300005294\|Ga0065705_10120542	All Organisms → cellular organisms → Bacteria → Proteobacteria	3020	Open in IMG/M
3300005331\|Ga0070670_100069456	All Organisms → cellular organisms → Bacteria → Proteobacteria	3024	Open in IMG/M
3300005332\|Ga0066388_100263485	All Organisms → cellular organisms → Bacteria	2364	Open in IMG/M
3300005332\|Ga0066388_103019295	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005332\|Ga0066388_104892046	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300005333\|Ga0070677_10045904	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300005334\|Ga0068869_101513056	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005341\|Ga0070691_10595159	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300005355\|Ga0070671_100094369	All Organisms → cellular organisms → Bacteria → Proteobacteria	2507	Open in IMG/M
3300005364\|Ga0070673_100173020	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300005365\|Ga0070688_101463684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300005367\|Ga0070667_100448432	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300005440\|Ga0070705_100019382	All Organisms → cellular organisms → Bacteria → Proteobacteria	3580	Open in IMG/M
3300005440\|Ga0070705_100067033	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300005441\|Ga0070700_100437559	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300005444\|Ga0070694_100285966	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300005444\|Ga0070694_100700337	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300005445\|Ga0070708_100606373	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300005445\|Ga0070708_101260758	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005447\|Ga0066689_10145507	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300005451\|Ga0066681_10226370	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300005456\|Ga0070678_100729459	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300005457\|Ga0070662_100132882	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300005468\|Ga0070707_100051206	All Organisms → cellular organisms → Bacteria → Proteobacteria	3959	Open in IMG/M
3300005471\|Ga0070698_100962527	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005530\|Ga0070679_100169813	All Organisms → cellular organisms → Bacteria	2154	Open in IMG/M
3300005535\|Ga0070684_100238196	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300005535\|Ga0070684_101608315	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300005536\|Ga0070697_100498683	All Organisms → cellular organisms → Bacteria → Proteobacteria	1064	Open in IMG/M
3300005543\|Ga0070672_101737832	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300005544\|Ga0070686_101627709	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005545\|Ga0070695_100327504	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300005545\|Ga0070695_101321546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales → Kallotenuaceae → Kallotenue → Kallotenue papyrolyticum	596	Open in IMG/M
3300005547\|Ga0070693_101063070	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005549\|Ga0070704_100857231	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005561\|Ga0066699_10453074	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300005564\|Ga0070664_101284102	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005713\|Ga0066905_102340084	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005840\|Ga0068870_10397754	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300005842\|Ga0068858_102395827	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005842\|Ga0068858_102547287	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005843\|Ga0068860_100340829	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300005937\|Ga0081455_10623840	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300006049\|Ga0075417_10285376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales → Kallotenuaceae → Kallotenue → Kallotenue papyrolyticum	798	Open in IMG/M
3300006058\|Ga0075432_10052833	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300006194\|Ga0075427_10080362	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300006237\|Ga0097621_101630328	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300006794\|Ga0066658_10026148	All Organisms → cellular organisms → Bacteria → Proteobacteria	2327	Open in IMG/M
3300006844\|Ga0075428_100022526	All Organisms → cellular organisms → Bacteria	6975	Open in IMG/M
3300006852\|Ga0075433_10190293	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300006852\|Ga0075433_10364198	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300006852\|Ga0075433_10913829	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300006852\|Ga0075433_11166843	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300006854\|Ga0075425_102059152	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300006871\|Ga0075434_101723530	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300006903\|Ga0075426_10610025	All Organisms → cellular organisms → Bacteria → Proteobacteria	815	Open in IMG/M
3300006904\|Ga0075424_100024643	All Organisms → cellular organisms → Bacteria → Proteobacteria	6194	Open in IMG/M
3300006904\|Ga0075424_100845825	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300007076\|Ga0075435_100167950	All Organisms → cellular organisms → Bacteria → Proteobacteria	1850	Open in IMG/M
3300007076\|Ga0075435_101586755	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300009090\|Ga0099827_10404242	All Organisms → cellular organisms → Bacteria → Proteobacteria	1167	Open in IMG/M
3300009090\|Ga0099827_11335007	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300009092\|Ga0105250_10506846	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300009094\|Ga0111539_10530849	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300009094\|Ga0111539_10919455	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300009098\|Ga0105245_13254876	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300009147\|Ga0114129_10284338	Not Available	2209	Open in IMG/M
3300009147\|Ga0114129_12545206	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300009147\|Ga0114129_13374248	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300010043\|Ga0126380_11499457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300010046\|Ga0126384_11876903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300010047\|Ga0126382_10110259	All Organisms → cellular organisms → Bacteria → Proteobacteria	1801	Open in IMG/M
3300010147\|Ga0126319_1233110	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300010337\|Ga0134062_10358299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300010360\|Ga0126372_11939695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300010362\|Ga0126377_10292580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1603	Open in IMG/M
3300010366\|Ga0126379_12156616	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300010371\|Ga0134125_12069398	Not Available	619	Open in IMG/M
3300010399\|Ga0134127_10000298	All Organisms → cellular organisms → Bacteria	52030	Open in IMG/M
3300010399\|Ga0134127_10017067	All Organisms → cellular organisms → Bacteria → Proteobacteria	5542	Open in IMG/M
3300010400\|Ga0134122_11841908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300010401\|Ga0134121_10875820	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300010401\|Ga0134121_12155420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300010401\|Ga0134121_12186283	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300011431\|Ga0137438_1066500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1079	Open in IMG/M
3300012200\|Ga0137382_10291981	All Organisms → cellular organisms → Bacteria → Proteobacteria	1136	Open in IMG/M
3300012203\|Ga0137399_10031971	All Organisms → cellular organisms → Bacteria → Proteobacteria	3635	Open in IMG/M
3300012207\|Ga0137381_11041642	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300012208\|Ga0137376_10048098	All Organisms → cellular organisms → Bacteria → Proteobacteria	3476	Open in IMG/M
3300012212\|Ga0150985_107399604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300012685\|Ga0137397_10008360	All Organisms → cellular organisms → Bacteria	7201	Open in IMG/M
3300012912\|Ga0157306_10196707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300012922\|Ga0137394_10427754	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300012925\|Ga0137419_10207998	Not Available	1452	Open in IMG/M
3300012944\|Ga0137410_10461787	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300012944\|Ga0137410_10692764	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300012948\|Ga0126375_11663347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300012958\|Ga0164299_10599243	All Organisms → cellular organisms → Bacteria → Proteobacteria	753	Open in IMG/M
3300012961\|Ga0164302_11109466	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300013297\|Ga0157378_11731369	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300014969\|Ga0157376_10975537	Not Available	869	Open in IMG/M
3300015359\|Ga0134085_10528062	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300015371\|Ga0132258_10337765	All Organisms → cellular organisms → Bacteria	3721	Open in IMG/M
3300015371\|Ga0132258_11545637	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300015371\|Ga0132258_12022894	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300015371\|Ga0132258_12966624	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300015372\|Ga0132256_100099866	All Organisms → cellular organisms → Bacteria	2824	Open in IMG/M
3300015372\|Ga0132256_101581690	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300015372\|Ga0132256_102930820	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300015373\|Ga0132257_104225409	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300015374\|Ga0132255_101655004	Not Available	970	Open in IMG/M
3300015374\|Ga0132255_104041808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300018083\|Ga0184628_10022779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3095	Open in IMG/M
3300020005\|Ga0193697_1134349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300020005\|Ga0193697_1139602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300020080\|Ga0206350_11112571	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300021445\|Ga0182009_10000644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	8230	Open in IMG/M
3300021445\|Ga0182009_10025919	All Organisms → cellular organisms → Bacteria	2288	Open in IMG/M
3300021445\|Ga0182009_10371684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	734	Open in IMG/M
3300022756\|Ga0222622_10303308	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300025521\|Ga0210083_1051593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300025885\|Ga0207653_10221811	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300025893\|Ga0207682_10014506	All Organisms → cellular organisms → Bacteria → Proteobacteria	3071	Open in IMG/M
3300025893\|Ga0207682_10288583	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300025901\|Ga0207688_10433393	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300025908\|Ga0207643_10089480	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300025912\|Ga0207707_10695281	Not Available	854	Open in IMG/M
3300025912\|Ga0207707_10839378	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300025918\|Ga0207662_11315707	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300025919\|Ga0207657_11196193	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300025922\|Ga0207646_10176360	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300025922\|Ga0207646_10219495	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300025922\|Ga0207646_10723792	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300025926\|Ga0207659_10657354	Not Available	896	Open in IMG/M
3300025930\|Ga0207701_10362997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1251	Open in IMG/M
3300025931\|Ga0207644_10740611	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300025934\|Ga0207686_10012647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4644	Open in IMG/M
3300025938\|Ga0207704_11710022	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300025940\|Ga0207691_10523293	Not Available	1006	Open in IMG/M
3300025942\|Ga0207689_10870900	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300026075\|Ga0207708_10438301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1086	Open in IMG/M
3300026075\|Ga0207708_10505766	All Organisms → cellular organisms → Bacteria → Proteobacteria	1013	Open in IMG/M
3300026088\|Ga0207641_11075817	Not Available	802	Open in IMG/M
3300026116\|Ga0207674_10956481	Not Available	825	Open in IMG/M
3300026118\|Ga0207675_101640857	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300026285\|Ga0209438_1003561	All Organisms → cellular organisms → Bacteria → Proteobacteria	5262	Open in IMG/M
3300026285\|Ga0209438_1151058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300026312\|Ga0209153_1117151	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300026313\|Ga0209761_1204179	All Organisms → cellular organisms → Bacteria → Proteobacteria	862	Open in IMG/M
3300026315\|Ga0209686_1093606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1051	Open in IMG/M
3300026325\|Ga0209152_10167624	Not Available	827	Open in IMG/M
3300026538\|Ga0209056_10056124	All Organisms → cellular organisms → Bacteria	3485	Open in IMG/M
3300026542\|Ga0209805_1302964	Not Available	606	Open in IMG/M
3300027873\|Ga0209814_10432489	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300027882\|Ga0209590_10476749	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300027882\|Ga0209590_10715011	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300027907\|Ga0207428_10437314	Not Available	955	Open in IMG/M
3300027907\|Ga0207428_10645794	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300027907\|Ga0207428_11319868	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300028536\|Ga0137415_10114812	All Organisms → cellular organisms → Bacteria → Proteobacteria	2540	Open in IMG/M
3300031184\|Ga0307499_10280945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300031226\|Ga0307497_10034332	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300031720\|Ga0307469_10190827	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300031720\|Ga0307469_10625052	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300031720\|Ga0307469_11173036	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300031720\|Ga0307469_11939314	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300031740\|Ga0307468_101125704	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300031740\|Ga0307468_101507634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300031820\|Ga0307473_10275387	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300032003\|Ga0310897_10149376	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300032003\|Ga0310897_10507022	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300032013\|Ga0310906_10965662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300032159\|Ga0268251_10597562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300032180\|Ga0307471_100025970	All Organisms → cellular organisms → Bacteria → Proteobacteria	4411	Open in IMG/M
3300032180\|Ga0307471_100068247	All Organisms → cellular organisms → Bacteria	3051	Open in IMG/M
3300032180\|Ga0307471_100422509	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300032180\|Ga0307471_100715066	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300032180\|Ga0307471_101454324	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300032180\|Ga0307471_104007388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300032421\|Ga0310812_10222524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300033433\|Ga0326726_10271506	Not Available	1584	Open in IMG/M
3300034149\|Ga0364929_0278226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.80%
Host-Associated	Host-Associated	37.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.90%
Plants	Host-Associated → Plants	35.75%
Aquatic	Environmental → Aquatic	2.90%
Human	Host-Associated → Human	1.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.56%
Sediment	Environmental → Aquatic → Sediment	1.45%
Digestive System	Host-Associated → Human → Digestive System	1.45%
Marine	Environmental → Aquatic → Marine	0.97%
Freshwater	Environmental → Aquatic → Freshwater	0.48%
Peat	Environmental → Terrestrial → Peat	0.48%
Floodplain	Environmental → Terrestrial → Floodplain	0.48%
Roots	Host-Associated → Plants → Roots	0.48%
Phylloplane	Host-Associated → Plants → Phylloplane	0.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.03%
Loam	Environmental → Terrestrial → Soil → Loam	16.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.01%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.45%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.45%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.97%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.48%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.48%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.48%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.48%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.45%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.45%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.48%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.48%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.48%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.48%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.45%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.45%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.45%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.48%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.48%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.48%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.48%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.48%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.48%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.48%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.48%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025521	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0033.00003930	2162886012	Miscanthus Rhizosphere	MQVDLTTEEAATLKGLLRDCIPDLKREIARADDRQFRHELVQREELCERLIVRLEDDASRTKSAPAL
INPhiseqgaiiFebDRAFT_1006785862	3300000364	Soil	MQVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLIARLDGDVARMHSARAL*
INPhiseqgaiiFebDRAFT_1006803553	3300000364	Soil	MQVELTTDEATTLKALLRDCIPDLKREIARADDRRFRHELVQREELCERLIVRLDGDTPTHSARAL*
INPhiseqgaiiFebDRAFT_1054170933	3300000364	Soil	MHVDLTTEEAATLKELLTDCIPDLKREIARADDRHFRHQLVQREELCERLITRLDSDASRTPSAPAL*
F14TC_1014660901	3300000559	Soil	GSEAVMQVELTTEEATTLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLIARLDMVRTPSAPAL*
JGI11615J12901_115622411	3300000953	Soil	MQVDLTPEEVSTLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDASHS
JGI1027J12803_1089419943	3300000955	Soil	MQVELTTDEATTLKALLRDCIPDLKREIARADDRRFRHELVQREELCERLIVRLDGDTPTHSA
Ga0055439_100055823	3300004019	Natural And Restored Wetlands	MQMDLTTEEAATLKGLLRDCIPDLKREIARADDRQFRHELVQREELCERLIARLDGDVARTHSAPAL*
Ga0062593_1000268633	3300004114	Soil	VKSGRLRGAIIGSEAVMQVDLTTEEAATLKGLLRDCIPDLKREIARADDRHFRHELVQREELCERLLVRLDDDASGTKPAPSL*
Ga0062593_1000563902	3300004114	Soil	MQVELTTEEARTLKALLRDTIPDLKREIARADDRRFRHELVLREELCERLVARLDSETSRTSL*
Ga0062593_1014817842	3300004114	Soil	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLIGRLDSGASRTSSAPAL*
Ga0062589_1008774812	3300004156	Soil	VKSGRLRGAIIGSEAVMQVDLTTEEAATLKGLLRDCIPDLKREIARADDRHFRHELVQREELCERLLVRLDDDASGTKPAPPL*
Ga0062590_1010392312	3300004157	Soil	MQVDLTTEEAATLKGLLRDCIPDLKREIARADDRHFRHELVQREELCERLLVRLDDDASGTKPAPSL*
Ga0062595_1005556562	3300004479	Soil	MHVDLTAEEAATLKGLLTDCIPDLKREIARADDRRFRHQLVQREELCERLITRLDSDAVRTSSSPAL*
Ga0062595_1019613301	3300004479	Soil	MQVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLIARLDSDTTRSAPPL*
Ga0062595_1022867142	3300004479	Soil	MHLDLTAEEADGLKGLLRDCLLDLKREISRTEKHDFRHQLVLREDLCEKVIARLEAA*
Ga0062592_1019976901	3300004480	Soil	GAIIGSEAVMQVDLTTEEAATLKGLLRDCIPDLKREIARADDRHFRHELVQREELCERLLVRLDDDASGTKPAPSL*
Ga0058859_114675632	3300004798	Host-Associated	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLIGRLDNGAPRTPSAPAL*
Ga0058860_118056942	3300004801	Host-Associated	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLIGRLDNGASRTPSAPAL*
Ga0058862_123919812	3300004803	Host-Associated	MHVDLTTEEAATLKGLLSDCIPDLKREIARADDRHFRHQLVQREELCERLISRLDSDVTRTSSAPAL*
Ga0062594_1000045714	3300005093	Soil	MQVDLTTEEAATLKGLLRDCIPDLKREIARADDRQFRHELVQREELCERLIVRLEDDASRTKSAPAL*
Ga0066672_107944823	3300005167	Soil	MHVDLTTEEAATLKELLNDCIPDLKREIARTENHQFRHELVQREELCERLIARLDSDAARTSNAPAL*
Ga0065704_100387351	3300005289	Switchgrass Rhizosphere	MQVELTTEEASTLKALLRDTIPDLKREIARADDRQFRHELVQREELCERLIARLDSGAAQTPSAPAL*
Ga0065715_102630492	3300005293	Miscanthus Rhizosphere	MQVDLTTEEAATLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLIERLDGDAPRAKSAPAL*
Ga0065715_108460433	3300005293	Miscanthus Rhizosphere	LTALLRDTIPDLKREIARADDRRFRHELVQREELCERLIARLGTGIARAS*
Ga0065705_101205422	3300005294	Switchgrass Rhizosphere	MQVELTTEEASTLKALLRDTIPDLKREIARADDRQFRHELVQREELCERLIARLDSGSSRTP*
Ga0070670_1000694561	3300005331	Switchgrass Rhizosphere	MQVDLTTEEAATLKGLLRDCIPDLKREIARADDRHFRHELVQREELCERLLVRLDDDASGTKPAPPL*
Ga0066388_1002634852	3300005332	Tropical Forest Soil	MQVDLTTEEAATLKGLLRDCIPDLKREITRADDRQFRHELVQREELCERLIARLDRDGTRTHSAPAL*
Ga0066388_1030192952	3300005332	Tropical Forest Soil	MHVDLTTEEVATLKGILRDCLLDLKREIARTDDRPFRHELVQREDFCERLIARLERDASRTPSAPAL*
Ga0066388_1048920462	3300005332	Tropical Forest Soil	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLIGRLDSGASRTSSPPAL*
Ga0070677_100459043	3300005333	Miscanthus Rhizosphere	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRKFRHELVQREELCERLIGRLDNGASRTSSAPAL*
Ga0068869_1015130563	3300005334	Miscanthus Rhizosphere	EEAATLKGLLRDCIPDLKREIARADDRHFRHELVQREELCERLLVRLDDDASGTKPAPSL
Ga0070691_105951592	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTPDEAAMLKGLLTDCIPDLKREIARTDHHGFRHELVQREELCERLLARLDAPESRTPSAPAL*
Ga0070671_1000943692	3300005355	Switchgrass Rhizosphere	MHVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLIARLDSDTTRSAPPL*
Ga0070673_1001730202	3300005364	Switchgrass Rhizosphere	MQVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLITRLDSDTTRSAPAL*
Ga0070688_1014636842	3300005365	Switchgrass Rhizosphere	VGTCVQSAAVKSGRLRGAIIGSEAVMQVDLTTEEAATLKGLLRDCIPDLKREIARADDRHFRHELVQREELCERLLVRLDDDASGTKPAPSL*
Ga0070667_1004484323	3300005367	Switchgrass Rhizosphere	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLIGRLDNGAPR
Ga0070705_1000193826	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTAEEAAMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIERLESDQRRTPSAPVL*
Ga0070705_1000670333	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTPEEAVMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDTSQSRTPSAPAL*
Ga0070700_1004375593	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLVARLDSGATRSVPAF*
Ga0070694_1002859661	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTAEEAATLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCVRLIARLESDQPRTPSAPVL*
Ga0070694_1007003371	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GGGDPMHVDLNADEAAMLKALLNDCIPDLKREIARTDNHRFRHELVQREELCERLIARLDSDASRTPVAPAL*
Ga0070708_1006063733	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTAEEAAMLKGLLRDTLPDLKREIARTEHHGFRHELVQREELCERLIARLEGEASRTPSVPPM*
Ga0070708_1012607581	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTSEEATTLKGLLSDCIPDLKREIARADDRRFRHQLVQREELCERLIARLDADASRTPSAPAL*
Ga0066689_101455073	3300005447	Soil	MHVDLTAEEAATLKGLLNDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDSEPSRTPAVPPM*
Ga0066681_102263703	3300005451	Soil	MHVDLTAEEAAMLKGLLRDTLPDLKREIARTEHHGFRHDLVQREELCERLIARLEGEASRTPSVPPM*
Ga0070678_1007294591	3300005456	Miscanthus Rhizosphere	MHVDLTADEAAMLKALLTDCITDLRREVARTDNHRFRHQLVQREEFCEQLIVRLDSGASRVPAAPAL*
Ga0070662_1001328823	3300005457	Corn Rhizosphere	LRGAIIGSEAVMQVDLTTEEAATLKGLLRDCIPDLKREIARADDRHFRHELVQREELCERLLVRLDDDASGTKPAPSL*
Ga0070707_1000512061	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTAEEAATLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIERLESDQRRTPSAPVL*
Ga0070698_1009625272	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTVEEATTLKGLLRDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDLDAARTPSAAPM*
Ga0070679_1001698133	3300005530	Corn Rhizosphere	GVREFGVGPIPESPEVMHVDLTTEEAATLKGLLSDCIPDLKREIARADDRHFRHQLVQREELCERLISRLDSDVTRTSSAPAL*
Ga0070684_1002381961	3300005535	Corn Rhizosphere	MHVDLTADEAAMLKALLTDCITDLRREVARTDNHRFRHQLVQREEFCEQLLVRLDSGASRVPAAPAL*
Ga0070684_1016083151	3300005535	Corn Rhizosphere	ATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLIGRLDNGASRTPSAPAL*
Ga0070697_1004986833	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EEAATLKGLLTDCIPDLKREIARADDRRFRHQLVQREELCERLITRLDSDAVRTSSSPAL
Ga0070672_1017378321	3300005543	Miscanthus Rhizosphere	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRKFRHELVQREELCERLIGRLD
Ga0070686_1016277093	3300005544	Switchgrass Rhizosphere	DLTTEEAATLKGLLRDCIPDLKREIARADDRQFRHELVQREELCERLIVRLEDDASRTKSAPAL*
Ga0070695_1003275043	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTAEEAATLKGLLTDCIPDLKREIARADDRRFRHQLVQREELCERLITRLDSDAVPTSSAPAL*
Ga0070695_1013215461	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTAEEAATLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLESDQPRTPSAPVL*
Ga0070693_1010630701	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MQVDLTTEEAATLKGLLRDCIPDLKREIARADDRHFRHELVQREELCERLLVRLDDDASGTKPA
Ga0070704_1008572312	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MQVDLTPEEVSTLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDASHSRTSSAPAL*
Ga0066699_104530741	3300005561	Soil	MHVDLTAEEAATLKELLRDCLPDLKREIARTEHHDFRHQLVEREELCERLIERLDTNAARTPSVPPM*
Ga0070664_1012841021	3300005564	Corn Rhizosphere	GSGFGVREFGVGPIPESSEVMHVDLTTEEAATLKGLLSDCIPDLKREIARADDRHFRHQLVQREELCERLISRLDSDVTRTSSAPAL*
Ga0066905_1023400842	3300005713	Tropical Forest Soil	MQMDLTTEEAATLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLIARLDRDVTRTHSAPAL*
Ga0068870_103977541	3300005840	Miscanthus Rhizosphere	TTEEAATLKGLLRDCILDLKREMARTEDRKFRHELVQREELCERLIGRLDNGASRTSSAPAL*
Ga0068858_1023958272	3300005842	Switchgrass Rhizosphere	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRKFRHELVQREELCERLIGRLDNG
Ga0068858_1025472871	3300005842	Switchgrass Rhizosphere	MHVDLNADEAAMLKALLNDCIPDLKREIARTDNHRFRHELVQREELCERLIARLDSDASRTPVAPAL*
Ga0068860_1003408293	3300005843	Switchgrass Rhizosphere	MQVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLLVRLDDDASGTKPAPSL*
Ga0081455_106238402	3300005937	Tabebuia Heterophylla Rhizosphere	MQVELTTEEASTLKALLRDTIPDLKREIARADDRQFRHELVQREELCERLISRLDGETSRRSQ*
Ga0075417_102853761	3300006049	Populus Rhizosphere	MHVDLTPEEAVMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDTSQSRTPSAPVL*
Ga0075432_100528331	3300006058	Populus Rhizosphere	MHVDLTAEEAAMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLESDQPRTPSAPVL*
Ga0075427_100803623	3300006194	Populus Rhizosphere	DLTTEEAATLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLIARLDRDVTRTHSAPAL*
Ga0097621_1016303282	3300006237	Miscanthus Rhizosphere	MQVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLIARLDSDTTRSAPAL*
Ga0066658_100261483	3300006794	Soil	MHVDLTTEEAATLKELLNDCIPDLKREIARTENHQFRHELVQREELCERLIARLDSDASRTPAAPAL*
Ga0075428_1000225269	3300006844	Populus Rhizosphere	MQVDLTTEEAATLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLVARLDRDVTRAHSAPAL*
Ga0075433_101902931	3300006852	Populus Rhizosphere	MHVDLTAEEAATLKELLNDCIPDLKREIARADDRHFRHQLVQREELCERLIARLDSDASRTPSAPAL*
Ga0075433_103641983	3300006852	Populus Rhizosphere	MQVDLTTEEAATLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLIARLDRDVTRTHSAPAL*
Ga0075433_109138291	3300006852	Populus Rhizosphere	MHVDLTAEEAAMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLESDQPRTPS
Ga0075433_111668432	3300006852	Populus Rhizosphere	MQVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLIARLDSDTTRSAPPP*
Ga0075425_1020591521	3300006854	Populus Rhizosphere	MHVDLTPEEAVMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDTSQSRTPPAPAL*
Ga0075434_1017235302	3300006871	Populus Rhizosphere	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLIGRLDNGASRTSSAPAL*
Ga0075426_106100251	3300006903	Populus Rhizosphere	AMLKALLNDCIPDLKREIARTDNHRFRHELVQREELCERLIARLDSDASRTPVAPAL*
Ga0075424_1000246434	3300006904	Populus Rhizosphere	MQVDLTTEEAATLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLIARLDRDVTRAHSAPAL*
Ga0075424_1008458251	3300006904	Populus Rhizosphere	MQVELTTEEASALKALLRDTIPDLKREMARTDDRQFRHELVLREELCERLIARL
Ga0075435_1001679503	3300007076	Populus Rhizosphere	MHVDLTAEEAATLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIERLDSDQRRTPSAPVL*
Ga0075435_1015867553	3300007076	Populus Rhizosphere	VMQVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLIARLDSDTTRSAPPL*
Ga0099827_104042422	3300009090	Vadose Zone Soil	MHVDLTVEEATMLKGLLRDCIPDLKREIARTEHHGFRHELVQREELCERLIERLGSDASRTPTAPVL*
Ga0099827_113350072	3300009090	Vadose Zone Soil	MHVDLTAEEAAMLKGLLVDCIPDLKREIARTEHHGFRHELVQREELCERLIARLEPDQPRTPSAPAL*
Ga0105250_105068462	3300009092	Switchgrass Rhizosphere	MNVDLTPEEAVMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDTSQSRTPSAPAL*
Ga0111539_105308493	3300009094	Populus Rhizosphere	MQMDLTTDEAATLKGLLRDCILDLKREMARTDDRQFRHELVQREELCERLIARLDGGAVRSAPAL*
Ga0111539_109194552	3300009094	Populus Rhizosphere	DLTTEEAATLKGLLRDCIPDLKREIARADDRQFRHELVQREELCERLIVRLDSNAARSAPAL*
Ga0105245_132548762	3300009098	Miscanthus Rhizosphere	MHVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLIARLDSDTT
Ga0114129_102843383	3300009147	Populus Rhizosphere	MKVELTTEEASTLKALLRDTIPDLKREIARADDRQFRHELVQREELCERLVARLDSEASRTSL*
Ga0114129_125452061	3300009147	Populus Rhizosphere	QSAAVKSGRFSGAIIGSEAVMQMDLTTEEAATLKGLLRDCIPDLKREIARADDRQFRHELVQREELCERLIVRLEDDASRTKSAPAL*
Ga0114129_133742482	3300009147	Populus Rhizosphere	MQVELTTEEASALKALLRDTIPDLKREMARTDDRQFRHELVLREELCERLIARLDSDAARSAPAL*
Ga0126380_114994571	3300010043	Tropical Forest Soil	MQMDLTTEEAGTLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLIARLDSGATQSVPAF*
Ga0126384_118769033	3300010046	Tropical Forest Soil	MHVELTTEEATTLKALLRDCVLDLKREMARTDDRQFRHELVQREELCERLITRLDGDASRTKSAPAL*
Ga0126382_101102594	3300010047	Tropical Forest Soil	MQVDLTTEEAATLKGLLRDCIPDLKREITRADDRQFRHELVQREELCERLIARLDRDVTRTHSAPAL*
Ga0126319_12331102	3300010147	Soil	MHVDLTAEEAAMLKGLLRDTLPDLKREIARTEHHGFRHELVLREELCERLIARLEAEASRTPSVPPM*
Ga0134062_103582993	3300010337	Grasslands Soil	MHVDITAEEAATLKGLLTDCIPDLKREIARTENHQFRHELVVREELCERLIARLDSDASRTSSAPAL*
Ga0126372_119396952	3300010360	Tropical Forest Soil	MHLDLTTEEVATLKGILRDCLLDLKREIARTDDRPFRHELVLREDLCERLIARLERDASRTPSAPAL*
Ga0126377_102925803	3300010362	Tropical Forest Soil	MHLDLTTEEAATLKGVLRDCVVDLKREISRTEKHDFRHELVLREDLCEKLIVQLGGELPEPPL*
Ga0126379_121566163	3300010366	Tropical Forest Soil	MQVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLIARLDSDRTRSAPAL*
Ga0134125_120693981	3300010371	Terrestrial Soil	MHVDLTPDEAAMLKGLLTDCIPDLKREIARTDHHGFRHELVQREELCERLLARLD
Ga0134127_1000029826	3300010399	Terrestrial Soil	MHVDLTPDEAAMLKGLLTDCIPDLKREIARTDHHGFRHELVQREGLCERLLARLDAPESRTPSAPAL*
Ga0134127_100170672	3300010399	Terrestrial Soil	MQVELTTEEASTLKALLRDTLPDLKREIARADDRQFRHQLVQREELCERLITRLDSEASRTSL*
Ga0134122_118419082	3300010400	Terrestrial Soil	MHVELTAEEAATLKGLLTDCIPDLKREIARADDRRFRHQLVQREELCERLITRLDSDAVPTSSAPAL*
Ga0134121_108758201	3300010401	Terrestrial Soil	MQVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLIARLDSDTTRSAPP
Ga0134121_121554201	3300010401	Terrestrial Soil	MQMDLTTEEIATLKGLLRDCNPDLKREIARTDDRGFRHELVQREELCERLIERLDTGSA
Ga0134121_121862832	3300010401	Terrestrial Soil	MHVDLTTEEAATLKALLSDCIPDLKREIARADDRRFRHQLVQREELCERLIARIDSDDVRTATAPPL*
Ga0137438_10665003	3300011431	Soil	MHVDLTAEEAAMLKGLLRDTLPDLKREIARTEHHGFRHELVQREELCERLIARLESEASRTASGPPM*
Ga0137382_102919813	3300012200	Vadose Zone Soil	MHVDLTTEEAAGLKELLADCIPDLKREIARTENHQFRHELVQREELCERLIARLDSDATHRSNAPAL*
Ga0137399_100319711	3300012203	Vadose Zone Soil	MHVDLTPEEAVMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIERLDTSPSRTPSAPAL*
Ga0137381_110416422	3300012207	Vadose Zone Soil	MHVDLTAEEAAMLKGLLRDTLPDLKREIARTEHHGFRHELVQREELCERLIARLEGEPSRTPSVPPM*
Ga0137376_100480985	3300012208	Vadose Zone Soil	MHVDLTTEEAAGLKELLADCIPDLKREIARTENHQFRHELVQREELCERLIARLDSDATHRSSAPAL*
Ga0150985_1073996041	3300012212	Avena Fatua Rhizosphere	VDLSFEEAATLKALLADCIPDLKREIARTDHHGFRHELVQREELCERLIVRLDADPSRPPSAPAL*
Ga0137397_100083604	3300012685	Vadose Zone Soil	MHVDLTPEEAVMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIERLDTTPSRTPSAPAL*
Ga0157306_101967072	3300012912	Soil	KSGRLRGAIIGSEAVMQVDLTTEEAATLKGLLRDCIPDLKREIARADDRHFRHELVQREELCERLLVRLDDDASGTKPAPSL*
Ga0137394_104277542	3300012922	Vadose Zone Soil	MRIDMTADEAAMLKGLLADCMLGLKREIARTEHHGFRHELVQREELCESLIARLDADEADQSRTSSAPAS*
Ga0137419_102079984	3300012925	Vadose Zone Soil	MHVDLTPEEAVMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIERL
Ga0137410_104617872	3300012944	Vadose Zone Soil	MHFDLTTEEAAMLKGLLHDSIPDLKREIARTDDRGFRHDLVKREELCERLILRLDAEGVRP*
Ga0137410_106927643	3300012944	Vadose Zone Soil	MHVDLTPEEAVALKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDATQSRTSSAPAL*
Ga0126375_116633472	3300012948	Tropical Forest Soil	MHVDLTPDEAVTLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDASHSRASTAPAL*
Ga0164299_105992432	3300012958	Soil	MHVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLIARLDSDTTRSAAPAL*
Ga0164302_111094661	3300012961	Soil	MQVDLTTEEAATLKGLLRDCIPDLKREIARADDRRFRHELVQREELCERLIARLDGDAARSARAL*
Ga0157378_117313692	3300013297	Miscanthus Rhizosphere	MHVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLIARLDSDTTRSAPAL*
Ga0157376_109755371	3300014969	Miscanthus Rhizosphere	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLIGRLENGASRTPSAPAL*
Ga0134085_105280622	3300015359	Grasslands Soil	MHVDLTADEVATLKGLLRDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDSDASRTPSAPVM*
Ga0132258_103377652	3300015371	Arabidopsis Rhizosphere	VRRDNESEAVMQVELTTEEASTLKALLRDTIPDLKREIARADDRQFRHELVQREELCERLIARLDSDAERSAHAL*
Ga0132258_115456373	3300015371	Arabidopsis Rhizosphere	MRIDLTADEAEMLKGLLGDCILGLKREIARTEHHGFRHELVQREELCESLIARLDADQSRTSSAPAS*
Ga0132258_120228943	3300015371	Arabidopsis Rhizosphere	MQMDLTTEEAATLQGLLRDCILDLKREMARTEDRQFRHELVQREELCERLIGRLDSGASRTSSAPAL*
Ga0132258_129666242	3300015371	Arabidopsis Rhizosphere	LHRGRPDADDQIREIVMQMDLTTEEIATLKGLLRDCIPDLKREIARTDDRGFRHELVQREELCERLIARLDTGSARP*
Ga0132256_1000998665	3300015372	Arabidopsis Rhizosphere	MQVELTTEEASTLKALLRDTIPDLKREIARADDRQFRHELVQREELCERLIARLDSDAERSAHAL*
Ga0132256_1015816901	3300015372	Arabidopsis Rhizosphere	EEAVTLKALLRDCIPDLKREIARADDRHFRHELVQREELCERLIARLNSDTTRSAPTL*
Ga0132256_1029308201	3300015372	Arabidopsis Rhizosphere	MHVDLTTEEAATLKALLSDCIPDLKREIARADDRRFRHQLVQREELCERLIARIDSDEVRTATAPPL*
Ga0132257_1042254092	3300015373	Arabidopsis Rhizosphere	MRIDLTADEAEMLKGLLGDCILGLKREIARTEHHGFRHELVQREELCESLIARLDAVQSRPSSAPAS*
Ga0132255_1016550041	3300015374	Arabidopsis Rhizosphere	MHVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLIARLDSDTTRSAPAL
Ga0132255_1040418082	3300015374	Arabidopsis Rhizosphere	MQVDLSAEEAAALQGLLRDCLPDLRREIARTERRDFRHQLVMREELCERLIARLAGLDDTKSSVPPM*
Ga0184628_100227793	3300018083	Groundwater Sediment	MHVDLTAEEAAMLKGLLRDTLPDLKREIARTEHHGFRHELVQREELCERLIARLEAEASRTPSVPPM
Ga0193697_11343492	3300020005	Soil	VMMYVDLTVEEAAMLKGLLTDCIPDLKREIARTDHHGFRHELVEREELCERLIARLDANQSRTPSAPAL
Ga0193697_11396022	3300020005	Soil	MRIDLTADEAEMLKGLLGDCILGLKREIARTEHHGFRHELVQREELCESLIARLDADDSRTSSAPAS
Ga0206350_111125712	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTTEEAATLKGLLSDCIPDLKREIARADDRHFRHQLVQREELCERLISRLDSDVTRTSSAPAL
Ga0182009_100006446	3300021445	Soil	MHVDLNADEAAMLKALLNDCIPDLKREIARTDNHRFRHELVQREELCERLIARLDSDASRTPVAPAL
Ga0182009_100259194	3300021445	Soil	MHVDLTADEAAMLKALLTDCITDLRREVARTDNHRFRHQLVQREEFCEQLIVRLDSGASRVPAAPAL
Ga0182009_103716842	3300021445	Soil	MQVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLITRLDSDTTRSAPAL
Ga0222622_103033083	3300022756	Groundwater Sediment	MHVDLTAEEAAMLKGLLRDTLPDLKREIARTEHHGFRHELVQREELCERLIARLETEASRTPSVPPM
Ga0210083_10515931	3300025521	Natural And Restored Wetlands	MQMDLTTEEAATLKGLLRDCIPDLKREIARADDRQFRHELVQREELCERLIARLDGDVARTHSAPAL
Ga0207653_102218111	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MQMDLTTEEAATLKGLLRDCIPDLKREIARADDRQFRHELVQREELCERLIVRLEDDA
Ga0207682_100145063	3300025893	Miscanthus Rhizosphere	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRKFRHELVQREELCERLIGRLDNGASRTSSAPAL
Ga0207682_102885833	3300025893	Miscanthus Rhizosphere	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLIGRLDNGASRTPSAPAL
Ga0207688_104333932	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MQVDLTTEEAATLKGLLRDCIPDLKREIARADDRHFRHELVQREELCERLLVRLDDDASGTKPAPSL
Ga0207643_100894805	3300025908	Miscanthus Rhizosphere	TTEEAATLKGLLRDCILDLKREMARTEDRKFRHELVQREELCERLIGRLDNGASRTSSAPAL
Ga0207707_106952812	3300025912	Corn Rhizosphere	MHVDLTTEEAATLKGLLSDCIPDLKREIARADDRHFRHQLVQREELCERLISRLDSDVTRTSS
Ga0207707_108393783	3300025912	Corn Rhizosphere	MQVDLTTEEAATLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLIERLDGDAPRAKSAPAL
Ga0207662_113157072	3300025918	Switchgrass Rhizosphere	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLIGRLDNGAPRTPSAPAL
Ga0207657_111961931	3300025919	Corn Rhizosphere	MQMDLTTEEAATLKGLLRDCIPDLKREIARADDRQFRHELVQREELCERLIVRLEDDASRTKSAPAL
Ga0207646_101763603	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTSEEATTLKGLLSDCIPDLKREIARADDRRFRHQLVQREELCERLIARLDADASRTPSAPAL
Ga0207646_102194952	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTAEEAATLKGLLTDCIPDLKREIARADDRRFRHQLVQREELCERLITRLDSDAVRTSSSPAL
Ga0207646_107237922	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTPEEAVMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDTSQSRTPSAPAL
Ga0207659_106573542	3300025926	Miscanthus Rhizosphere	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLVARLDSGATRSVPAF
Ga0207701_103629972	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	TTEEAATLKGLLRDCILDLKREMARTEDRKFRHELVQREELCERLIGRLDSGASRTSSAPAL
Ga0207644_107406113	3300025931	Switchgrass Rhizosphere	MQVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLIARLDSDTTRSAPAL
Ga0207686_100126477	3300025934	Miscanthus Rhizosphere	MHVDLTPDEAAMLKGLLTDCIPDLKREIARTDHHGFRHELVQREELCERLLARLDAPESRTPSAPAL
Ga0207704_117100222	3300025938	Miscanthus Rhizosphere	QMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLVARLDSGATRSVPAF
Ga0207691_105232932	3300025940	Miscanthus Rhizosphere	MQVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLIARLDSDTTRSAPPL
Ga0207689_108709003	3300025942	Miscanthus Rhizosphere	DLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLIVRLEDDASRTKSAPAL
Ga0207708_104383011	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LTTEEAATLKGLLRDCIPDLKREIARADDRHFRHELVQREELCERLLVRLDDDASGTKPAPSL
Ga0207708_105057663	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MHVDLTPDEAAMLKGLLTDCIPDLKREIARTDHHGFRHELVQREGLCERLLARLDAPESRTPSAPAL
Ga0207641_110758171	3300026088	Switchgrass Rhizosphere	MQVDLTTEEAVTLKALLRDCIPDLKREIARADDRQFRHQLVQREELCERLIARLDSDTTRSAP
Ga0207674_109564811	3300026116	Corn Rhizosphere	MHVDLTTEEAATLKGLLSDCIPDLKREIARADDRHFRHQLVQRKELCERLISRLDSDVTRTSSAPAL
Ga0207675_1016408572	3300026118	Switchgrass Rhizosphere	MQVELTTEEASTLKALLRDTIPDLKREIARADDRQFRHELVQREELCERLVARLDSEASRTSL
Ga0209438_10035616	3300026285	Grasslands Soil	MHVDLTPEEAVALKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDATQSRTSSAPAL
Ga0209438_11510581	3300026285	Grasslands Soil	MRIDLTGDEATMLKGLLADCILGLKREIARTEHHGFRHELVQREELCESLIARLDADQSRTSSAPAS
Ga0209153_11171513	3300026312	Soil	MHVDLTTEEAATLKELLNDCIPDLKREIARTENHQFRHELVQREELCERLIARLDSDAARTSNAPAL
Ga0209761_12041792	3300026313	Grasslands Soil	MHVDLTAEEAAMLKGLLADCIPDLKREIARTEHHGFRHELVQREELCERLIARLESDQPRTPSAPAL
Ga0209686_10936061	3300026315	Soil	EEAATLKELLNDCIPDLKREIARTENHQFRHELVQREELCERLIARLDSDAARTSNAPAL
Ga0209152_101676241	3300026325	Soil	MHVDLTTEEAATLKELLNDCIPDLKREIARTENHQFRHELVQREELCERLIARL
Ga0209056_100561242	3300026538	Soil	MHVDLTAEEAATLKGLLNDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDSEPSRTPAVPPM
Ga0209805_13029642	3300026542	Soil	MHVDLTAEEAATLKELLRDCLPDLKREIARTEHHDFRHQLVEREELCERLIERLDTNAARTPSVPPM
Ga0209814_104324892	3300027873	Populus Rhizosphere	MHVDLTAEEAAMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDTSQSRTPSAPVL
Ga0209590_104767492	3300027882	Vadose Zone Soil	MHVDLTVEEATTLKGLLRDCIPDLKREIARTEHHGFRHELVQREELCERLIERLGSDASRTPTAPVL
Ga0209590_107150113	3300027882	Vadose Zone Soil	AEEAAMLKGLLVDCIPDLKREIARTEHHGFRHELVQREELCERLIARLEPDQPRTPSAPA
Ga0207428_104373141	3300027907	Populus Rhizosphere	MQVDLTTEEAATLKGLLRDCIPDLKREIARADDRQFRHELVQREELCERLIVRLDSNAARSAPAL
Ga0207428_106457941	3300027907	Populus Rhizosphere	MHVDLTAEEAAMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLESDQPRTPSAPVL
Ga0207428_113198682	3300027907	Populus Rhizosphere	MQMDLTTDEAATLKGLLRDCILDLKREMARTDDRQFRHELVQREELCERLIARLDGGAVRSAPAL
Ga0137415_101148124	3300028536	Vadose Zone Soil	MHVDLTPEEAVMLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIERLDTTPSRTPSAPAL
Ga0307499_102809452	3300031184	Soil	MHVDLTAEEAAMLKGLLRDTLPDLKREIARTEHHGFRHELVQREELCERLIARLEGEASRTPPVPPI
Ga0307497_100343322	3300031226	Soil	MHVDLTAEEAAMLKGLLRDTLPDLKREIARTEHHGFRHELVQRQELCERLIARLEGEASRTPSVPPM
Ga0307469_101908271	3300031720	Hardwood Forest Soil	MQVDLTPEEVSTLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDASHSRTSSAPAL
Ga0307469_106250523	3300031720	Hardwood Forest Soil	MQVDLTPEEAAMLKGLLNDCLPDLKREIARTEHHGFRHELVQREELCERLIARLDASHSRTSSAPAL
Ga0307469_111730363	3300031720	Hardwood Forest Soil	MQVELTTEEASTLKALLRDTIPDLKREIARADDRQFRHELVQREELCERLISRLDSEPSRTSS
Ga0307469_119393142	3300031720	Hardwood Forest Soil	MQVDLTTEEAATLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLIARLDRDVTRTHSAPAL
Ga0307468_1011257042	3300031740	Hardwood Forest Soil	STLKGLLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDASHSRTSSAPAL
Ga0307468_1015076341	3300031740	Hardwood Forest Soil	CCGDAPGRAGAMIGSSGGRMQVDLTPEEAAMLKGLLNDCLPDLKREIARTEHHGFRHELVQREELCERLIARLDASHSRTSSAPAL
Ga0307473_102753872	3300031820	Hardwood Forest Soil	MQVDLTTEEAATLKALLRDCIPDLKREIARADDRQFRHELVQREELCERLIPRLDGDVARTHSAPAL
Ga0310897_101493761	3300032003	Soil	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLVARLD
Ga0310897_105070221	3300032003	Soil	TLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLVARLDSGATRSVPAF
Ga0310906_109656622	3300032013	Soil	MQMDLTTEEAATLKGLLRDCILDLKREMARTEDRQFRHELVQREELCERLVARLDSGATRSVPAL
Ga0268251_105975622	3300032159	Agave	MHVDLTSEEAATLKGLLADCIPDLKREIARADDRTFRHTLVQREELCERLIARLDADPSRSAPAM
Ga0307471_1000259703	3300032180	Hardwood Forest Soil	MHVDLTVEEAAMLKGLLTDCIPDLKREIARTDHHGFRHDLVQREELCERLIARLDTNQSRTPSAPAL
Ga0307471_1000682472	3300032180	Hardwood Forest Soil	MHVDLTAEEAAMLKGLLADCIPDLKREIARTEHHGFRHELVQREELCERLIARLESDQPRTPSAPVL
Ga0307471_1004225092	3300032180	Hardwood Forest Soil	MHVDLTVDEAATLKGLLSDCIPDLKREIARTDNHQFRHELVLREELCERLISRLDSDAARTPSAPAL
Ga0307471_1007150663	3300032180	Hardwood Forest Soil	MQVDLTTEEAATLKGLLRDCIPDLKREIARADDRRFRHELVQREELCERLIARLDGDAARSAPAL
Ga0307471_1014543242	3300032180	Hardwood Forest Soil	MQVELTTEEATTLKALLRDCIPDLKREITRADDRQFRHELVQREELCERLIARLDRDVTRTHSAPAL
Ga0307471_1040073882	3300032180	Hardwood Forest Soil	MQVDLTPEEVSTLKALLTDCIPDLKREIARTEHHGFRHELVQREELCERLIARLDASHSRTSSAPAL
Ga0310812_102225242	3300032421	Soil	MHVDLNADEAAMLKALLNDCIPDLKREIARTDNHRFRHELVQREELCERLIARLDSDASRTPVA
Ga0326726_102715062	3300033433	Peat Soil	MHVDLTAEEAAMLKGLLRDTLPDLKREIARTDHHGFRHELVQREELCERLIARLEGEASRTPSVPPM
Ga0364929_0278226_351_554	3300034149	Sediment	MHVDLTAEEAAMLKGLLRDTLPDLKREIARTEHHGFRHELVLREELCERLIARLEAEASRTPSVPPM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F024133

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences