Metagenome / Metatranscriptome Family F022508

Basic Information
Family ID	F022508
Family Type	Metagenome / Metatranscriptome
Number of Sequences	214
Average Sequence Length	41 residues
Representative Sequence	MDSAFKTWIGQPVVLQVALGDIKVPLRGKLLKDGPETVRMR
Number of Associated Samples	170
Number of Associated Scaffolds	214

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.33 %
% of genes near scaffold ends (potentially truncated)	97.66 %
% of genes from short scaffolds (< 2000 bps)	89.72 %
Associated GOLD sequencing projects	159
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.505 % of family members)
Environment Ontology (ENVO)	Unclassified (30.374 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1JGI1027J12803_1026379142 2JGI12637J13337_10059301 3JGI12712J15308_101223132 4Ga0052254_10155261 5JGI26341J46601_102205322 6Ga0062590_1009979702 7Ga0066680_105361411 8Ga0066673_101348441 9Ga0066388_1007705231 10Ga0068869_1004560362 11Ga0070711_1004631192 12Ga0066661_105195942 13Ga0066692_101404821 14Ga0066705_100219911 15Ga0066654_101868202 16Ga0066903_1033952221 17Ga0066696_104518701 18Ga0075024_1005664212 19Ga0075028_1000973803 20Ga0075018_108031441 21Ga0070712_1011380872 22Ga0075436_1007174742 23Ga0099791_106026712 24Ga0099793_102307931 25Ga0099794_100299334 26Ga0099794_101157191 27Ga0099829_109142551 28Ga0099829_114272852 29Ga0099830_108310731 30Ga0099830_115366182 31Ga0099828_102535802 32Ga0099828_103101863 33Ga0099827_100361765 34Ga0099827_101739603 35Ga0099827_111319002 36Ga0066709_1004105064 37Ga0126374_107981112 38Ga0126374_113704082 39Ga0126380_107875142 40Ga0126373_123227361 41Ga0134084_101470791 42Ga0134111_102281261 43Ga0134071_107673412 44Ga0074046_107958122 45Ga0074046_108034871 46Ga0074045_110750001 47Ga0126376_110554902 48Ga0126376_110973711 49Ga0126372_100860231 50Ga0126378_119256292 51Ga0126378_126520771 52Ga0126379_111919962 53Ga0126381_1006784391 54Ga0126381_1031476722 55Ga0126350_109527941 56Ga0137393_107774442 57Ga0137393_116874612 58Ga0137389_102554371 59Ga0137389_115757861 60Ga0137388_106367181 61Ga0137382_107130471 62Ga0137363_101801624 63Ga0137363_108384281 64Ga0137399_100586924 65Ga0137399_102155513 66Ga0137399_115040041 67Ga0137362_117639901 68Ga0137380_104575291 69Ga0137379_103007881 70Ga0137379_103603483 71Ga0137379_107040052 72Ga0137378_111472762 73Ga0137384_115080471 74Ga0137360_100221176 75Ga0137360_103366871 76Ga0137390_119206901 77Ga0137358_106931912 78Ga0137398_100342181 79Ga0137398_103565621 80Ga0137396_109858111 81Ga0137394_104182682 82Ga0137359_109744322 83Ga0137419_115964211 84Ga0137410_103070451 85Ga0126375_120599981 86Ga0134077_100350033 87Ga0134087_106198831 88Ga0137411_11053992 89Ga0137418_108759332 90Ga0137418_108807532 91Ga0182036_108388862 92Ga0182041_106793612 93Ga0182032_112946542 94Ga0182032_113502171 95Ga0182039_113570572 96Ga0187814_104341251 97Ga0187814_104373512 98Ga0187801_102100871 99Ga0187803_103047962 100Ga0187822_100149461 101Ga0187765_112862721 102Ga0187769_101438023 103Ga0066662_112268081 104Ga0182028_13344234 105Ga0137408_12519952 106Ga0179590_10700683 107Ga0179594_103582081 108Ga0179592_104811771 109Ga0210399_102512111 110Ga0210399_110705042 111Ga0210395_107017502 112Ga0210401_104369511 113Ga0179596_100801391 114Ga0210404_104253852 115Ga0210404_105435682 116Ga0210404_106646001 117Ga0210400_100304566 118Ga0210400_114249152 119Ga0210405_102071263 120Ga0210405_108739831 121Ga0210396_106012971 122Ga0213875_104057162 123Ga0210393_101326883 124Ga0210393_111721622 125Ga0210393_114444051 126Ga0210389_102588023 127Ga0210386_117681101 128Ga0210384_105697401 129Ga0210391_102918761 130Ga0210398_115145081 131Ga0210402_101763641 132Ga0210402_117866332 133Ga0210410_100018071 134Ga0210410_101058285 135Ga0224549_10321661 136Ga0247664_11554002 137Ga0179589_100286191 138Ga0137417_14568273 139Ga0247668_10363721 140Ga0247668_11052812 141Ga0207660_100887784 142Ga0207694_107523982 143Ga0207641_125227002 144Ga0209027_10997012 145Ga0209471_10188765 146Ga0209471_10961702 147Ga0209473_12812482 148Ga0209158_10950041 149Ga0257179_10222692 150Ga0257181_10097151 151Ga0209056_107205982 152Ga0179587_103418402 153Ga0179587_106179682 154Ga0207860_10120421 155Ga0207743_10306501 156Ga0209730_10325652 157Ga0209004_10839621 158Ga0208983_10980421 159Ga0209329_10521601 160Ga0209117_11287411 161Ga0209117_11314201 162Ga0208981_11205331 163Ga0209328_100681251 164Ga0209073_104163542 165Ga0209772_101919351 166Ga0209180_100483441 167Ga0209701_107442322 168Ga0209167_106655791 169Ga0209167_107807271 170Ga0209283_104017522 171Ga0209488_104243971 172Ga0209488_109255002 173Ga0209415_101397334 174Ga0137415_106538182 175Ga0137415_110024752 176Ga0222749_103451202 177Ga0247275_11298701 178Ga0302310_107198032 179Ga0170822_169451101 180Ga0170824_1030383492 181Ga0318573_106054701 182Ga0318555_104903462 183Ga0318561_105775871 184Ga0318496_102035271 185Ga0307474_100007041 186Ga0306917_106820891 187Ga0307469_107984851 188Ga0307469_121958732 189Ga0307468_1018261621 190Ga0307477_102564022 191Ga0307477_108884402 192Ga0318566_106022781 193Ga0318568_104907942 194Ga0307478_107223242 195Ga0306919_105444471 196Ga0310916_101959571 197Ga0306926_1001632910 198Ga0306926_127753042 199Ga0318530_104670011 200Ga0307479_101876933 201Ga0307479_119718032 202Ga0306922_110910612 203Ga0318549_103843642 204Ga0318514_105835471 205Ga0306924_112850241 206Ga0311301_1006534110 207Ga0307471_1000192511 208Ga0306920_1002977524 209Ga0335069_102128971 210Ga0335069_107048461 211Ga0335074_107556431 212Ga0335076_117040512 213Ga0310914_100833754 214Ga0318519_108049492
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1JGI1027J12803_1026379142 2JGI12637J13337_10059301 3JGI12712J15308_101223132 4Ga0052254_10155261 5JGI26341J46601_102205322 6Ga0066673_101348441 7Ga0066388_1007705231 8Ga0070711_1004631192 9Ga0066692_101404821 10Ga0075018_108031441 11Ga0099791_106026712 12Ga0099827_111319002 13Ga0066709_1004105064 14Ga0126380_107875142 15Ga0134071_107673412 16Ga0074046_108034871 17Ga0074045_110750001 18Ga0126376_110554902 19Ga0126378_126520771 20Ga0137362_117639901 21Ga0137360_103366871 22Ga0137358_106931912 23Ga0137410_103070451 24Ga0210395_107017502 25Ga0210404_106646001 26Ga0210405_102071263 27Ga0210396_106012971 28Ga0213875_104057162 29Ga0210393_114444051 30Ga0224549_10321661 31Ga0137417_14568273 32Ga0209328_100681251 33Ga0209180_100483441 34Ga0318561_105775871 35Ga0306920_1002977524
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40. 1Ga0137393_116874612 2JGI1027J12803_1026379142 3JGI12637J13337_10059301 4JGI26341J46601_102205322 5Ga0062590_1009979702 6Ga0066654_101868202 7Ga0075024_1005664212 8Ga0070712_1011380872 9Ga0075436_1007174742 10Ga0099794_101157191 11Ga0099829_109142551 12Ga0099827_100361765 13Ga0066709_1004105064 14Ga0126374_107981112 15Ga0126380_107875142 16Ga0134071_107673412 17Ga0074046_108034871 18Ga0126350_109527941 19Ga0137389_115757861 20Ga0137388_106367181 21Ga0137363_108384281 22Ga0137399_115040041 23Ga0137379_103603483 24Ga0137390_119206901 25Ga0137358_106931912 26Ga0137398_103565621 27Ga0137419_115964211 28Ga0137410_103070451 29Ga0182036_108388862 30Ga0182041_106793612 31Ga0182032_113502171 32Ga0182039_113570572 33Ga0187814_104373512 34Ga0187803_103047962 35Ga0187822_100149461 36Ga0187765_112862721 37Ga0066662_112268081 38Ga0182028_13344234 39Ga0137408_12519952 40Ga0179590_10700683 41Ga0179594_103582081 42Ga0210395_107017502 43Ga0210401_104369511 44Ga0210404_105435682 45Ga0210405_102071263 46Ga0210396_106012971 47Ga0210393_111721622 48Ga0210393_114444051 49Ga0210384_105697401 50Ga0247664_11554002 51Ga0137417_14568273 52Ga0209471_10188765 53Ga0207743_10306501 54Ga0209730_10325652 55Ga0209117_11314201 56Ga0209328_100681251 57Ga0209073_104163542 58Ga0209772_101919351 59Ga0209180_100483441 60Ga0209701_107442322 61Ga0209167_106655791 62Ga0209167_107807271 63Ga0209283_104017522 64Ga0209488_109255002 65Ga0209415_101397334 66Ga0222749_103451202 67Ga0302310_107198032 68Ga0318561_105775871 69Ga0318530_104670011 70Ga0306922_110910612 71Ga0311301_1006534110 72Ga0306920_1002977524 73Ga0335074_107556431
Powered by MSAViewer

Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.35% β-sheet: 26.09% Coil/Unstructured: 69.57%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
Powered by PDBe Molstar

Pfam ID	Name	% Frequency in 214 Family Scaffolds
PF01734	Patatin	60.28
PF09335	SNARE_assoc	4.67
PF13419	HAD_2	2.34
PF13561	adh_short_C2	0.47
PF04366	Ysc84	0.47
PF02321	OEP	0.47
PF01087	GalP_UDP_transf	0.47
PF01850	PIN	0.47

COG ID	Name	Functional Category	% Frequency in 214 Family Scaffolds
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	60.28
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	60.28
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	60.28
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	4.67
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	4.67
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	4.67
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	0.93
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.47

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.76 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.47 %
Unclassified	root	N/A	1.87 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.02 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.02 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.47 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.02 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.47 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.02 %
Unclassified	root	N/A	1.87 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.47 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.02 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.47 %
Unclassified	root	N/A	1.87 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_102637914	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300001137\|JGI12637J13337_1005930	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300001471\|JGI12712J15308_10122313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300003152\|Ga0052254_1015526	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300003219\|JGI26341J46601_10220532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300004157\|Ga0062590_100997970	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300005174\|Ga0066680_10536141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300005175\|Ga0066673_10134844	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300005332\|Ga0066388_100770523	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300005334\|Ga0068869_100456036	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.66%
Host-Associated	Host-Associated	2.34%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	5.14%
Plants	Host-Associated → Plants	2.34%
Terrestrial	Environmental → Terrestrial	92.52%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	3.74%
Peat	Environmental → Terrestrial → Peat	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%
Roots	Host-Associated → Plants → Roots	0.47%
Sediment	Environmental → Aquatic → Sediment	1.40%
Soil	Environmental → Terrestrial → Soil	91.59%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.47%
Loam	Environmental → Terrestrial → Soil → Loam	8.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.47%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.27%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.01%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.47%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.47%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.34%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.47%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.47%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.40%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.47%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.47%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.47%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.47%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.47%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.47%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.47%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.47%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.40%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M

Showing 1 to 10 of 170 entries

Previous1 2 3 4 5…17Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1026379142	3300000955	Soil	MDTAYQPWIGQAVVLQVELGDLKVPLRARLLKDGGETLRVRIGDGW
JGI12637J13337_10059301	3300001137	Forest Soil	MDSAYATWLGQAVVLQVALGDIKVPLRGTLLKDGDETVRMRIGDGWDVD
JGI12712J15308_101223132	3300001471	Forest Soil	MENAYKAWVGQSVLLQVALGDIKVPLRGTLLKNGSETIRMRIG
Ga0052254_10155261	3300003152	Sediment	MHNASNSSLRGTMEAGFNAWLGHAVVLQVALGDIKVPLRGKLLKEGGETVRMRIGEGWDV
JGI26341J46601_102205322	3300003219	Bog Forest Soil	MTEAFNTWVGREVVLQVALGDIKVPLRGRLLKDSEETVRM
Ga0062590_1009979702	3300004157	Soil	MDSAYAPWIGQQVVLQVALGEIKVPLRGTLLKDGGETVRMKIGEGWDVD
Ga0066680_105361411	3300005174	Soil	MDSAFKAWVGQPVVLQVALGDIKVPLRGKLLKVGDETVRMRIGDGWDV
Ga0066673_101348441	3300005175	Soil	MDSAFEAWIGQPVVLQVALGNIKVPLRGKLLKDGGETVRMRIGD
Ga0066388_1007705231	3300005332	Tropical Forest Soil	MQNGYNVWLGHAVVLQVALGDIQVPLRGKLLKEGGDTVRM
Ga0068869_1004560362	3300005334	Miscanthus Rhizosphere	MDSGYSAWIGLPVVLQVVLGDIKVPLRGKLLKEAGDTVRMRIGDG
Ga0070711_1004631192	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MASLRGYMEIGYNSWMGHSVVLQVALGDIRVPLRGKLLKE
Ga0066661_105195942	3300005554	Soil	MTDSAFKAWVGQPVVLQVALGDIKVPLRGKLLKDGGETIRMRIGDG
Ga0066692_101404821	3300005555	Soil	MDSAFKTWIGQPVVLQVALGDIKVPLRGKLLKDGPE
Ga0066705_100219911	3300005569	Soil	MDDTFKAWIGQPVLLQVALGEIKVPLRGKLLKDGGE
Ga0066654_101868202	3300005587	Soil	MDSAFAPWIGLPVILQVALGDIKVPLRGRLLKDSGET
Ga0066903_1033952221	3300005764	Tropical Forest Soil	MQNGYAVWLGQAVVLKVELGDIQVPLRGKLLKENSETVR
Ga0066696_104518701	3300006032	Soil	MDSAFKAWVGQPVVLQVALGDIKVPLRGKLLKDGDD
Ga0075024_1005664212	3300006047	Watersheds	MDSAYATWIGQPVVLQLALGDIKVPLRGKLLKDGGETV
Ga0075028_1000973803	3300006050	Watersheds	MDSGYSAWIGLPVVLQVALGDIKVPLRGKLLKDGGDTVRMRIGDGWD
Ga0075018_108031441	3300006172	Watersheds	MDMAYASWIGLPVVLQVVSGDIKVPLRGKLLKDKGDTVRIRIDGSDIDIY
Ga0070712_1011380872	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDTAYLAWIGQAVVLQVALGDVKVPLRGRLLKDGGETLRMRIG
Ga0075436_1007174742	3300006914	Populus Rhizosphere	MDSAYQPWIGQAVVLQVALGELRVPLRGRLMKDGGETLRMRI
Ga0099791_106026712	3300007255	Vadose Zone Soil	MDAEFKAWIGQPVVLQVARGNVKVPLRGKLLKDGSDTI
Ga0099793_102307931	3300007258	Vadose Zone Soil	MDSAFKTWIGQPVVLQVALGDIKVPLRGKLLKDGPETVRMRI
Ga0099794_100299334	3300007265	Vadose Zone Soil	VDKAFKTWIGHPVVLQVALGDIKVPLRGRLLKEGGETVRMRIGDG
Ga0099794_101157191	3300007265	Vadose Zone Soil	MHSAFAAWIGHPVVLQVALGDIKVPLRGKLLKEGGDTLRMRIGEGWDVD
Ga0099829_109142551	3300009038	Vadose Zone Soil	MDSAFKAWVGHPVVLQVALGNIKVPLRGKLLKEGGETV
Ga0099829_114272852	3300009038	Vadose Zone Soil	MDGAFKAWIGQPVVLQVALGDIKVPLRGKLLKDGGETIRMRIGDGWDI
Ga0099830_108310731	3300009088	Vadose Zone Soil	MDSAFKAWVGQPVVLQVALGNIKVPLRGKLLKEGGETV
Ga0099830_115366182	3300009088	Vadose Zone Soil	MDNAFKAWIGQPVVLQVALGDIKVPLRGKLLKDGDETVRMRIGDGWDV
Ga0099828_102535802	3300009089	Vadose Zone Soil	MDGAFKAWIGHPVVLQVALGNIKVPLRGKLLKDGG*
Ga0099828_103101863	3300009089	Vadose Zone Soil	MDSAYATWIGQPVVLQLALGDIKVPLRGKLLKDGGETVRMRIGDGWDV
Ga0099827_100361765	3300009090	Vadose Zone Soil	MNNAFKTWIGHPVVLQVALGDIKVPLRGKLLKDGGETV
Ga0099827_101739603	3300009090	Vadose Zone Soil	MDSAFKAWVGQPVILQVALGDIKVPLRGKLLKDGDETVRMRIG
Ga0099827_111319002	3300009090	Vadose Zone Soil	MDNAFAPWIGQAVVLQVALGEGKVALRGKLVKDCG
Ga0066709_1004105064	3300009137	Grasslands Soil	MDIAYQTWIGQAVVLQVALGDIKVPLRGRVMKDGGETVRMR
Ga0126374_107981112	3300009792	Tropical Forest Soil	MDSAFKAWVGQPVVLQVALGDIKVPLRGKLMKDGSDTVRMRIGE
Ga0126374_113704082	3300009792	Tropical Forest Soil	MESAFKAWIGHPVVLQVALGDIRVPLRGRLLKDGSDTV
Ga0126380_107875142	3300010043	Tropical Forest Soil	MDSAYQPWIGQAVVLQVVLGELKVPLRGRVLKDGGE
Ga0126373_123227361	3300010048	Tropical Forest Soil	MDSAFKAWIGQPVVLQVALGDIKVPLRGKLLKDGSDTVRMRIG
Ga0134084_101470791	3300010322	Grasslands Soil	MESAFKAWIGQPVVLQVALGDIKVPLRGKLLKDGSDTVRM
Ga0134111_102281261	3300010329	Grasslands Soil	MDSAFKTWIGQPVVLQVALGDIKVPLRGKLLKDGPETVRMRIGEG*
Ga0134071_107673412	3300010336	Grasslands Soil	MDDAFAPWIGQAVVLQVALGEGKVALRGKLVKDCGEAVRVRLGENNGQGW
Ga0074046_107958122	3300010339	Bog Forest Soil	MQTGYNVWMGHAVVLQVALGDIQVPLRGKLLKEAGDTVRMRIGEGWD
Ga0074046_108034871	3300010339	Bog Forest Soil	MNTGYANWMGHAVVLQVELGDIKVPLRGKLLKENRETVRMRIGEGWD
Ga0074045_110750001	3300010341	Bog Forest Soil	MNTGYTNWLGHAVVLHVEVGDIKVPLRGKLLKENPET
Ga0126376_110554902	3300010359	Tropical Forest Soil	MDTAYQTWIGESVVLQVALGDIKVPLKGKLLKDGGETIRMRVGDGWDIDIYK
Ga0126376_110973711	3300010359	Tropical Forest Soil	MQSAFATWIGQPVVLQVALGDIKVPLRGKLLKEGGDTLRVR
Ga0126372_100860231	3300010360	Tropical Forest Soil	MDSAFKAWVGQPVVLQVALGDIKVPLRGKLMKDGSDTVRMRIGEGW
Ga0126378_119256292	3300010361	Tropical Forest Soil	MQKGYEVWLGQAVVLKVELGDIQVPLRGKLLKENSETVRMRIGEG
Ga0126378_126520771	3300010361	Tropical Forest Soil	MRQILLEGSPMEAGYNAWLGHAVVLQVALGDIKVPLRGKLLKEGGETVRMR
Ga0126379_111919962	3300010366	Tropical Forest Soil	MKSAFKAWVGQPVVLQVALGDIKVPLRGKLMKDGS
Ga0126381_1006784391	3300010376	Tropical Forest Soil	MESAFKAWIGHPVVLQVALGDIKVPLRGRLLKDGSDTV
Ga0126381_1031476722	3300010376	Tropical Forest Soil	MQNGYTVWLGQAVVLKVELGDIQVPLRGKLLKENSETVRMRIGEGWDV
Ga0126350_109527941	3300010880	Boreal Forest Soil	MENAYKAWVGQSVLLQVALGDIKVPLRGTLLKDGSETIRMRIG
Ga0137393_107774442	3300011271	Vadose Zone Soil	MDSAFKAWVGQPVVLQVALGNIKVPLRGKLLKEGGETVRM
Ga0137393_116874612	3300011271	Vadose Zone Soil	MDSAFKTWIGQPVVLQVALGDIKVPLRGKLLKDGPETVRMR
Ga0137389_102554371	3300012096	Vadose Zone Soil	MDSAFKAWVGQPVVLQVALGDIKVPLRGKLLKVGDKTIRMRIGDGWD
Ga0137389_115757861	3300012096	Vadose Zone Soil	MENGFKAWVGQPVVLQVALGDIKVPLRGKLLKDGDETVRMRIGD
Ga0137388_106367181	3300012189	Vadose Zone Soil	METAFKAWIGQRVVLQVALGDIRVPLRGKLLKDGDDTV
Ga0137382_107130471	3300012200	Vadose Zone Soil	MDTAYQPWIGQAVVLQVALGDVKVPLRGRLLKDAGETL
Ga0137363_101801624	3300012202	Vadose Zone Soil	MDSAYTAWIGQPVVLQVALGDIKVPLRGKLLKDGGE
Ga0137363_108384281	3300012202	Vadose Zone Soil	MDDAFKAWVGQPVVLQVALGDIKVPLRGRLLKDGDD
Ga0137399_100586924	3300012203	Vadose Zone Soil	VDNAFKAWIGQPVVLQVALGDIKVPLRGKLLKDGGETVRMRIGEGWDV
Ga0137399_102155513	3300012203	Vadose Zone Soil	VDKAFKTWIGHPVVLQVALGDIKVPLRGKLLKDGGETVRM
Ga0137399_115040041	3300012203	Vadose Zone Soil	MDAEFKAWIGQPVVLQVALGNVKVPLRGKLLKDGGETIRMRIGEGWDV
Ga0137362_117639901	3300012205	Vadose Zone Soil	LSGRTIEGAKVDKAFKTWIGHPVVLQVALGDIKVPLRGRLLKEGGETVRMRIGDG
Ga0137380_104575291	3300012206	Vadose Zone Soil	MESAFKTWIGQPVVLQVALGDIKVPLRGKLLKDGPETVRMRIG
Ga0137379_103007881	3300012209	Vadose Zone Soil	MDDAFKAWIGQPVVLQVALGEIKVPLRGKLLKDGSETVRMRIGEGWDV
Ga0137379_103603483	3300012209	Vadose Zone Soil	MDSAFKVWIGQPVVLQVALGEVKVPLRGKLLKDSGETV
Ga0137379_107040052	3300012209	Vadose Zone Soil	MDTAYQPWIGQAVVLQVALGDVKVPLRGRLLMDGGETLRMRIGDG
Ga0137378_111472762	3300012210	Vadose Zone Soil	MESAFKTWIGQPVVLQVALGDIKVPLRGKLLKDGPETVRMR
Ga0137384_115080471	3300012357	Vadose Zone Soil	MDSAFKTWIGQPVVLQVALGDIKVPLRGKLLKDGPET
Ga0137360_100221176	3300012361	Vadose Zone Soil	VDNAFKAWIGQPVVLQVALGDIKVPLRGRLLKDGEEN
Ga0137360_103366871	3300012361	Vadose Zone Soil	MDSAFATWIGRPVVLQVALGESRVGVRGILLRDGADTLRVRL
Ga0137390_119206901	3300012363	Vadose Zone Soil	MDKSFTAWVGQPVVLQVALGDIKVPLRGKLLKVGGETV
Ga0137358_106931912	3300012582	Vadose Zone Soil	LDSADQPWIGHAVVLPVAVGDIKVPLRGRSLRDGG
Ga0137398_100342181	3300012683	Vadose Zone Soil	MDDAFKAWIGQPVVLQVALGEIKVPLRGKLLKDGAETVRMRIGEGWD
Ga0137398_103565621	3300012683	Vadose Zone Soil	MTDSAFKAWVGQPVVLQVALGDIKVPLRGKLLKDGGETIRMR
Ga0137396_109858111	3300012918	Vadose Zone Soil	VDKAFKTWIGHPVVLQVALGDIKVPLRGRLLKEGG
Ga0137394_104182682	3300012922	Vadose Zone Soil	MPSVFATWIGQPVVLQVALGDIRVPLRGKLLKEGGD
Ga0137359_109744322	3300012923	Vadose Zone Soil	MDTAYLAWIGQAVVLQVALGDVKVPLRGRLLKDGGETLRMRIGD
Ga0137419_115964211	3300012925	Vadose Zone Soil	LDSAYQPWIGHAVVLQVALGDIKVPLRGRILRDGGET
Ga0137410_103070451	3300012944	Vadose Zone Soil	MPSVFATWIGQPVVLQVALGDIRVPLRGKLLKEGCDTLKM
Ga0126375_120599981	3300012948	Tropical Forest Soil	MESAFKAWVGHPVVLQVALGDIKVPLRGKLMKDGSDTVRMRIGE
Ga0134077_100350033	3300012972	Grasslands Soil	MDSAFKAWVGQPVVLQVDLGDIKVPLRGKLLKDGED
Ga0134087_106198831	3300012977	Grasslands Soil	MDDTFKAWIGQPVLLQVALGEIKVPLRGKLLKDGGETVRMRIGEGWDVD
Ga0137411_11053992	3300015052	Vadose Zone Soil	MDSAFEAWIGQPVVLQVALGNIKVPLRGKLLKDGGETVRMRIGDGWD
Ga0137418_108759332	3300015241	Vadose Zone Soil	MDIAYQPWIGQAVVLQVALGDIKVPLRGRVMKDGGETVRMRIGD
Ga0137418_108807532	3300015241	Vadose Zone Soil	MDSAFKAWVGQPVVLQVALGDIKVPLRGKLLKDGDDTV
Ga0182036_108388862	3300016270	Soil	MQNGYTVWLGQAVVLKVELGDIQVPLRGKLLKENSETVRMR
Ga0182041_106793612	3300016294	Soil	MDTAYKPWIGQAVVLQVALGDIKVPLRGRLLKDGGETMRMSIGEG
Ga0182032_112946542	3300016357	Soil	MQNGYKVWLGQAVVLKVELGDIQVPLRGKLLKENSETVRMRIG
Ga0182032_113502171	3300016357	Soil	MEAGFNAWVGHAVVLQVALGDIKVPLRGKLLREGGETVRMRIGEGWDVD
Ga0182039_113570572	3300016422	Soil	MQTGYNVWLGHAVVLQVALGDIQVPLRGKLLKESGDTVRMRIGDGWDVD
Ga0187814_104341251	3300017932	Freshwater Sediment	MDNAFKSWIGHPVVLQVALGDIKVPLRGKLLKDGGETVR
Ga0187814_104373512	3300017932	Freshwater Sediment	MQTGFNSWLGHAVVLQVALGNIQVPLRGKLLKEGGDT
Ga0187801_102100871	3300017933	Freshwater Sediment	MQTGFNVWLGHAVVLQVALGDIQVPLRGKLLKESGDTVRMRI
Ga0187803_103047962	3300017934	Freshwater Sediment	MDRAYTAWIGHPVVLQVALGDIKVPLRGKLLKDGGDTV
Ga0187822_100149461	3300017994	Freshwater Sediment	MDTAYQPWIGQAVVRQVALGDIKVPLRGRLLRDGGETLRMRIG
Ga0187765_112862721	3300018060	Tropical Peatland	MDTAYQPWIGESVVLQVALGDIKVPLRGKLLKDGGETIRMRV
Ga0187769_101438023	3300018086	Tropical Peatland	MESAFKSWIGHPVVLQVALGDIKVPLRGKLLKDGDD
Ga0066662_112268081	3300018468	Grasslands Soil	MDSGYSDWIGLPVVLQVALGDIKVPLRGKLLKEAGDTVRMR
Ga0182028_13344234	3300019788	Fen	MNTGYTNWLGHAVVLHVELGDIKVPLRGKLLKENRERCG
Ga0137408_12519952	3300019789	Vadose Zone Soil	MDSAFKAWVGQPVVLQVALGDIKVPLRGKLLKVGDETVR
Ga0179590_10700683	3300020140	Vadose Zone Soil	MDSAFATWIGRPVVLQVALGESRVGVRGMLLRDGADTLRVR
Ga0179594_103582081	3300020170	Vadose Zone Soil	VDKAFKTWIGHPVVLQVALGDIKVPLRGRLLKEGGETVRMRIG
Ga0179592_104811771	3300020199	Vadose Zone Soil	MPSVFATWIGQPVVLQVALGDIRVPLRGKLLKEGG
Ga0210399_102512111	3300020581	Soil	MDSAYATWLGHSVVLQVALGDIKVPLRGTLLKDGEDTVRMRIGEG
Ga0210399_110705042	3300020581	Soil	MDSAYATWLGQPVVLQVALGDIKVPLRGTLLKDGGET
Ga0210395_107017502	3300020582	Soil	MEIGYNGWMGHSVVLQVALGDIRVPLRGKLLKENGDS
Ga0210401_104369511	3300020583	Soil	MESGYNAWVGQPVVLQVALGDIKVPLRGKLLKEGGDTVR
Ga0179596_100801391	3300021086	Vadose Zone Soil	MPSAFATWIGQPVVLQVALGDIRVPLRGKLLKEGC
Ga0210404_104253852	3300021088	Soil	MDSAFEAWIGQPVVLQVALGNIKVPLRGKLLKDGGETVR
Ga0210404_105435682	3300021088	Soil	MDMAYASWIGLPVVLQVVLGDIKVPLRGKLLKDKGETVRIRIDGSDIDI
Ga0210404_106646001	3300021088	Soil	MEAGYNAWLGQAVVLQVALGDIKVPLRGRLLKEGGE
Ga0210400_100304566	3300021170	Soil	MDGAFKAWIGQPVVLQVALGDIKVPLRGKLLKDGG
Ga0210400_114249152	3300021170	Soil	MHSAFAPWIGHPVVLQVALGDIKVPLRGKLLKEGGDTLRMRIG
Ga0210405_102071263	3300021171	Soil	MESAFALWVGRPVVLRVALGDCKVGVRGTLLKDGTETLK
Ga0210405_108739831	3300021171	Soil	MQPSAFAMWIGQPVVLQVALGDIRVPLRGKLLKEG
Ga0210396_106012971	3300021180	Soil	MDSAYKSWVGLPVVLRVALGDIKVPLRGKMLKDGGDTIRM
Ga0213875_104057162	3300021388	Plant Roots	MDMAYASWIGLPVVLQVVLGDIKVPLRGKLLKDKGETV
Ga0210393_101326883	3300021401	Soil	MDSAYATWLGQSVVLQVALGDIKVPLRGTLLKDGEDTVRMRI
Ga0210393_111721622	3300021401	Soil	MEAGYNAWLGQAVVLQVALGDIKVPLRGRLLKEGGETV
Ga0210393_114444051	3300021401	Soil	MIDAFQPWVGQSVVLQVALGDIKVPLRGKLLRDSEETVRMRIGEGWDV
Ga0210389_102588023	3300021404	Soil	MDMAYASWIGLPVVLQVVLGDIKVPLRGKLLKDKGET
Ga0210386_117681101	3300021406	Soil	MESAYATWLGQPVVLQVALGDIKVPLRGTLLKDGDDTVRVRIGDGWD
Ga0210384_105697401	3300021432	Soil	MDSAYQPWIGQPVVLQVALGDIRVPLRGKLLKDGGETV
Ga0210391_102918761	3300021433	Soil	MDSAYEAWMGQPVVLQVALGDIKVPLRGTLLKDGG
Ga0210398_115145081	3300021477	Soil	MEAGYNAWLGQAVVLQVALGDIKVPLRGRLLKEGG
Ga0210402_101763641	3300021478	Soil	MDSGYSAWIGLPVVLQVALGDIKVPLRGKLLKDGGDTVRM
Ga0210402_117866332	3300021478	Soil	MEAGFNAYLGHAVVLQVALGEIRVPLRGKLLKEGGETV
Ga0210410_100018071	3300021479	Soil	VDSAFKSWIGQPVVLQVALGDIKVPLRGKLLKDGG
Ga0210410_101058285	3300021479	Soil	MDSAYATWLGQSVVLQVALGDIKVPLRGTLLKDGDETVRMRI
Ga0224549_10321661	3300022840	Soil	MKSGYEAWIGVPVVLQVALGDSKVPLRGKLLKESVDTVR
Ga0247664_11554002	3300024232	Soil	MDAAYQPWIGQAVVLQVALGELKVPLRGRLLKDDGETLRMKV
Ga0179589_100286191	3300024288	Vadose Zone Soil	MDSAFEAWIGQPVVLQVALGNIKVPLRGKLLKDGGETVRMRI
Ga0137417_14568273	3300024330	Vadose Zone Soil	MTDSAFKAWVGQPVVLQVRWETSSAATRELLKDGGETVRMRIGDGWDVESIGHDFGG
Ga0247668_10363721	3300024331	Soil	MDAAYQPWIGQAVVLQVALGELKVPLRGRLLKDDG
Ga0247668_11052812	3300024331	Soil	MDIAYQPWIGQAVVLQVALGDIKVPLRGRVMKDGGDTVRMRIGD
Ga0207660_100887784	3300025917	Corn Rhizosphere	MDSAYAPWIGQQVVLQVALGEIKVPLRGTLLKDGGETVRMKIGEG
Ga0207694_107523982	3300025924	Corn Rhizosphere	MDLAYASWIGLPVVLQVVSGDIKVPLRGKLLKDKGD
Ga0207641_125227002	3300026088	Switchgrass Rhizosphere	MDTAYQPWVGQAVVLQVALGDIMVPLRGRLLKDGGE
Ga0209027_10997012	3300026300	Grasslands Soil	MDSAFAPWIGLPVILQVALGDIKVPLRGRLLKDSG
Ga0209471_10188765	3300026318	Soil	MDSTFKPWIGQPVMLQVALGEIKVPLRGKLLKDGGETVRMRIGEGWDV
Ga0209471_10961702	3300026318	Soil	MDSAFEAWIGQPVVLQVALGNIKVPLRGKLLKDGEDTV
Ga0209473_12812482	3300026330	Soil	MESAFKAWIGQPVVLQVALGDIKVPLRGKLLKDGSDTV
Ga0209158_10950041	3300026333	Soil	MDSAFKAWVGQPVVLQVALGDIKVPLRGKLLKDGEDTVRMRIGDGW
Ga0257179_10222692	3300026371	Soil	MDAEFKAWIGQPVVLQVALGNVKVPLRGKLLKDGGETIRM
Ga0257181_10097151	3300026499	Soil	MDSAFKAWIGQPVVLQVAVGDIKVPLRGKLLKDGGETVRMRIGE
Ga0209056_107205982	3300026538	Soil	MDTAYQPWIGQAVVLQVALGEVKVPLRGRLLKDGGETLRMRIGDG
Ga0179587_103418402	3300026557	Vadose Zone Soil	MPSVFATWIGQPVVLQVALGDIRVPLRGKLLKEGGDT
Ga0179587_106179682	3300026557	Vadose Zone Soil	MDSAYATWLGQSVVLQVALGDIKVPLRGTLLKDGEDTVRMRIGEGW
Ga0207860_10120421	3300026921	Tropical Forest Soil	MQTGYNVWLGHAVVLQVALGDIQVPLRGKLLKESGDT
Ga0207743_10306501	3300026945	Tropical Forest Soil	MQTGFNGWLGHAVILQVALGDIKVPLRGKLLKENGETVRMRIGEGW
Ga0209730_10325652	3300027034	Forest Soil	MDGAFKAWVGQPVVLQLALGDIKVPLRGKLLKDGNDT
Ga0209004_10839621	3300027376	Forest Soil	MQTGYNVWLGQAVVLQVALGDIKVPLRGRLLKEGGE
Ga0208983_10980421	3300027381	Forest Soil	MDSAFATWIGRPVVLQVALGESRVGVRGMLLRDGADTLRV
Ga0209329_10521601	3300027605	Forest Soil	MDSAFEAWIGQPVVLQVALGNIKVPLRGKLLKDGGETVRMRIGDGWDVD
Ga0209117_11287411	3300027645	Forest Soil	MLTGYNDWLGHAVVLQVALGDIQVPLRGKLLKEGGDTVRMRIG
Ga0209117_11314201	3300027645	Forest Soil	VDNAFKAWIGQPVVLQVALGDIKVPLRGKLLKDGGETVR
Ga0208981_11205331	3300027669	Forest Soil	MPSAFATWIGQPVVLQVALGDIRVPLRGKLLKEGCDTLKM
Ga0209328_100681251	3300027727	Forest Soil	MDTAYRVWMGHAVVLQVAVGDIKVPLRGRLLKEAGET
Ga0209073_104163542	3300027765	Agricultural Soil	MESAFKAWIGHPVVLQVALGDIKVPLRGKLLKDGSDTVR
Ga0209772_101919351	3300027768	Bog Forest Soil	MEAGYNAYLGHAVVLQVALGEIQVPLRGRLLKEGGETVRM
Ga0209180_100483441	3300027846	Vadose Zone Soil	MVEAAYAPWIGQAVVLQVALGDIKVPLRGRVLEDSGTA
Ga0209701_107442322	3300027862	Vadose Zone Soil	MDSAFEAWIGQPVVLQVALGNIKVPLRGKLLKDGGETVRM
Ga0209167_106655791	3300027867	Surface Soil	MESAYATWIGRPVVLQLALGDIKVPLRGKLLKEGGDTVR
Ga0209167_107807271	3300027867	Surface Soil	MDSAYETWVGQPVVLQVALGDIKVPLRGTMLKDGGETVRMRIGEGWDVD
Ga0209283_104017522	3300027875	Vadose Zone Soil	MDGAFKAWIGHPVVLQVELGNIKVPLRGKLLKDGGETV
Ga0209488_104243971	3300027903	Vadose Zone Soil	MHSAFAAWIGQPVVLQIALGDIKVPLRGKLLKEGG
Ga0209488_109255002	3300027903	Vadose Zone Soil	MDTAYQPWIGQAVVLQVALGEVKVPLRGRLLMDGGETLRM
Ga0209415_101397334	3300027905	Peatlands Soil	MNSAYATWLGQSVVLQVALGDIKVPLRGTLLRDGEDTVRMRIGEGW
Ga0137415_106538182	3300028536	Vadose Zone Soil	MDSAFKAWIGQPVVLQVALGEIKVPLRGKLLKDGGETVRMRIGE
Ga0137415_110024752	3300028536	Vadose Zone Soil	VDNAFKAWVGQPVVLQVALGDIKVPLRGKLLKDGDDTIRMR
Ga0222749_103451202	3300029636	Soil	MESAYTTWVGQPVVLQVALGDIKLPLRGTLLKDGAETV
Ga0247275_11298701	3300029817	Soil	MNTGYTNWLGHAVVLQVELGDIKVPLRGKLLKENRETV
Ga0302310_107198032	3300030737	Palsa	MKSGYEAWIGVPVVLQVALGDSKVPLRGKLLKESVDTVRMRIGDGWD
Ga0170822_169451101	3300031122	Forest Soil	MDTAYLAWIGQAVVLQVALGDVKVPLRGRLLKDSGETLRMRI
Ga0170824_1030383492	3300031231	Forest Soil	MDTAYLAWIGQAVVLQVALGDVKVPLRGRLLKDSGE
Ga0318573_106054701	3300031564	Soil	MEAGFNAWVGHAVVLQVALGDIKVPLRGKLLREGG
Ga0318555_104903462	3300031640	Soil	MDSAFKAWIGHPVVLQVALGDIKVPLRGKLLKDGSDT
Ga0318561_105775871	3300031679	Soil	MDNPYQTWIGESVVLQVALGDIRVPLRGRLLKDGGKT
Ga0318496_102035271	3300031713	Soil	MQNGYAVWLGQAVVLKVELGDIQVPLRGKLLKENSETVRMRIGEGWDVD
Ga0307474_100007041	3300031718	Hardwood Forest Soil	MPSVFAMWIGQPVVLQVALGDIRVPLRGKLLKEGGD
Ga0306917_106820891	3300031719	Soil	MQNGYTVWLGQAVVLKVELGDIQVPLRGKLLKENSDTVRMRIGEGWDV
Ga0307469_107984851	3300031720	Hardwood Forest Soil	MDTAYQPWIGQAVVLQVALGEVKVPLRGRLLMDGGETLRMRIGDG
Ga0307469_121958732	3300031720	Hardwood Forest Soil	MEIGYNGWMGHSVVLQVALGDIRVPLRGKLLKENGD
Ga0307468_1018261621	3300031740	Hardwood Forest Soil	MDTAYQPWIGQAVVLQVALGEVKVPLRGRLLMDGGETL
Ga0307477_102564022	3300031753	Hardwood Forest Soil	MDSAFKAWVGHPVVLQVALGDIKVPLRGKLLKVGDKT
Ga0307477_108884402	3300031753	Hardwood Forest Soil	MDSAYATWLGQSVVLQVALGDIKVPLRGTLLKDGEDTVRMRIGE
Ga0318566_106022781	3300031779	Soil	MQTGYNVWLGQAVVLQVALGDIKVPLRGKLLKENGDTVRMRI
Ga0318568_104907942	3300031819	Soil	MQTGYNVWLGQAVVLQVALGDIKVPLRGKLLKENGDTVR
Ga0307478_107223242	3300031823	Hardwood Forest Soil	MDTAYLAWIGQAVVLQVALGDVKVPLRGRLLKDGGETLRMRIGDG
Ga0306919_105444471	3300031879	Soil	MQNGYTVWLGQAVVLKVELGDIQVPLRGKLLKENSDTVRMRIGEGWD
Ga0310916_101959571	3300031942	Soil	MQNGYAVWLGQAVVLKVELGDIQVPLRGKLLKENSETVRMRIGEGW
Ga0306926_1001632910	3300031954	Soil	MKNGYEVWLGQAVVLKVELGDIQVPLRGRLLKENSE
Ga0306926_127753042	3300031954	Soil	MEAGYNAWLGHAVVLQVALGDIKVPLRGKLLKEGGETVRMR
Ga0318530_104670011	3300031959	Soil	MDSAFKAWIGHPVVLQVVLGDIKVPLRGRLLKDGGDTV
Ga0307479_101876933	3300031962	Hardwood Forest Soil	MDKAFKAWIGQPVVLQVALGDIKVPLRGKLLKVGVETVRMRI
Ga0307479_119718032	3300031962	Hardwood Forest Soil	MDTAYLAWIGQAVVLQVALGDVKVPLRGRLLKDSGETLRMRIGD
Ga0306922_110910612	3300032001	Soil	MDAAYQPWIGQAVVLQVALGDVKVPLRGRLLRDSGET
Ga0318549_103843642	3300032041	Soil	MQNGYAVWLGQAVVLKVELGDIQVPLRGKLLKENSETVRMRI
Ga0318514_105835471	3300032066	Soil	MQKGYEVWLGQAVVLKVELGDIQVPLRGKLLKENSDTVRMRIGEGWD
Ga0306924_112850241	3300032076	Soil	MDAAYQPWIGQAVVLQVALGDVKVPLRGRLLRDSGE
Ga0311301_1006534110	3300032160	Peatlands Soil	MTTGYSNWLGRAVVLHVEVGDIKVPLRGKRLKENPETVRVR
Ga0307471_1000192511	3300032180	Hardwood Forest Soil	MEAGYNAWLGQAVVLQVALGDIKVPLRGRLLKEGGET
Ga0306920_1002977524	3300032261	Soil	MQTAYNVWVGQPVVLQVALGNIKVPLRGKLLKEAGDTVRMRIGDGWDV
Ga0335069_102128971	3300032893	Soil	MEAGYNAWLGHAVVLQVALGDIKVPLRGKLLKEGGETVRMRIGEG
Ga0335069_107048461	3300032893	Soil	MEAGFNAWLGHAVVLQVALGDIKVPLRGKLLKEGGETVRMRIGEGWD
Ga0335074_107556431	3300032895	Soil	MQTGYEMWVGQPVVLQVTLGDIQVPLRGKLLKEGGDTV
Ga0335076_117040512	3300032955	Soil	MDMAYASWIGLPVVLQVVSGDIKVPLRGKLLKDKGETVRIRI
Ga0310914_100833754	3300033289	Soil	MQKGYEVWLGQAVVLKVELGDIQVPLRGKLLKENSDTVRMRI
Ga0318519_108049492	3300033290	Soil	MQTGYNVWLGQAVVLQVALGDIKVPLRGKLLKENGDTVRMRIGEGWDVD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F022508

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences