Metagenome / Metatranscriptome Family F021643

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F021643
Family Type	Metagenome / Metatranscriptome
Number of Sequences	218
Average Sequence Length	70 residues
Representative Sequence	MTLSSPDTPPTDVPEADWAEQAAEADPLAEAEGEAAQPAYSGRGIREVDDADLAEQETVAYVEDDDIR
Number of Associated Samples	153
Number of Associated Scaffolds	218

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.44 %
% of genes near scaffold ends (potentially truncated)	27.98 %
% of genes from short scaffolds (< 2000 bps)	84.86 %
Associated GOLD sequencing projects	143
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.917 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (33.945 % of family members)
Environment Ontology (ENVO)	Unclassified (32.110 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.404 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.38% β-sheet: 0.00% Coil/Unstructured: 90.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 218 Family Scaffolds
PF03023	MurJ	18.35
PF05872	HerA_C	11.01
PF13738	Pyr_redox_3	5.96
PF01370	Epimerase	2.75
PF01494	FAD_binding_3	1.38
PF13399	LytR_C	1.38
PF00155	Aminotran_1_2	1.38
PF13460	NAD_binding_10	0.92
PF13683	rve_3	0.92
PF12680	SnoaL_2	0.92
PF03480	DctP	0.46
PF06559	DCD	0.46
PF12900	Pyridox_ox_2	0.46
PF00665	rve	0.46
PF02371	Transposase_20	0.46
PF03033	Glyco_transf_28	0.46

COG ID	Name	Functional Category	% Frequency in 218 Family Scaffolds
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	18.35
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	18.35
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	18.35
COG0433	Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domains	Replication, recombination and repair [L]	11.01
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	2.75
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.38
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.38
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.38
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.46
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.46
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.46
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.46
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.46
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.46

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.92 %
Unclassified	root	N/A	49.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.92 %
Unclassified	root	N/A	49.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.92 %
Unclassified	root	N/A	49.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.20 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.20 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.72 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	10.09 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10.09 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4.13 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.29 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.46 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10.09 %
Dermacoccaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae	1.38 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.46 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.46 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.46 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10.09 %
Luteipulveratus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Luteipulveratus	1.38 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.46 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.46 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.46 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10.09 %
Luteipulveratus mongoliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Luteipulveratus → Luteipulveratus mongoliensis	1.38 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.46 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.46 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.46 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10.09 %
Luteipulveratus mongoliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Luteipulveratus → Luteipulveratus mongoliensis	1.38 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.46 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.46 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.46 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10795707	Not Available	1292	Open in IMG/M
3300000559\|F14TC_103712963	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300000858\|JGI10213J12805_10136100	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300000858\|JGI10213J12805_10255841	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300000956\|JGI10216J12902_111759727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1033	Open in IMG/M
3300000956\|JGI10216J12902_119437661	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300001431\|F14TB_100647879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2566	Open in IMG/M
3300002568\|C688J35102_120705909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1388	Open in IMG/M
3300002899\|JGIcombinedJ43975_10114349	Not Available	503	Open in IMG/M
3300003267\|soilL1_10217174	Not Available	1125	Open in IMG/M
3300003373\|JGI25407J50210_10039974	Not Available	1202	Open in IMG/M
3300003911\|JGI25405J52794_10027094	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300003911\|JGI25405J52794_10078556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300004114\|Ga0062593_101126568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	817	Open in IMG/M
3300004157\|Ga0062590_101777011	Not Available	631	Open in IMG/M
3300004463\|Ga0063356_100259315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2115	Open in IMG/M
3300004463\|Ga0063356_102102518	Not Available	857	Open in IMG/M
3300004463\|Ga0063356_104849077	Not Available	578	Open in IMG/M
3300004479\|Ga0062595_100061391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Luteipulveratus → Luteipulveratus mongoliensis	1790	Open in IMG/M
3300005169\|Ga0066810_10018032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Luteipulveratus → Luteipulveratus mongoliensis	1141	Open in IMG/M
3300005169\|Ga0066810_10154291	Not Available	550	Open in IMG/M
3300005337\|Ga0070682_100024348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3602	Open in IMG/M
3300005338\|Ga0068868_101194285	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300005345\|Ga0070692_11137277	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005546\|Ga0070696_100505337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	962	Open in IMG/M
3300005615\|Ga0070702_100153216	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300005615\|Ga0070702_101626972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	535	Open in IMG/M
3300005937\|Ga0081455_10003540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17916	Open in IMG/M
3300005937\|Ga0081455_10047626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3711	Open in IMG/M
3300005937\|Ga0081455_10085034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2580	Open in IMG/M
3300005937\|Ga0081455_10316767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1113	Open in IMG/M
3300005937\|Ga0081455_10469917	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300005981\|Ga0081538_10000975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	30522	Open in IMG/M
3300006058\|Ga0075432_10011784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2971	Open in IMG/M
3300006169\|Ga0082029_1157079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2038	Open in IMG/M
3300006194\|Ga0075427_10014233	Not Available	1219	Open in IMG/M
3300006576\|Ga0074047_11198502	Not Available	866	Open in IMG/M
3300006577\|Ga0074050_11571569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1601	Open in IMG/M
3300006581\|Ga0074048_13185900	Not Available	787	Open in IMG/M
3300006844\|Ga0075428_100296420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1739	Open in IMG/M
3300006847\|Ga0075431_100877962	Not Available	867	Open in IMG/M
3300006876\|Ga0079217_10170130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1079	Open in IMG/M
3300006918\|Ga0079216_10117721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1323	Open in IMG/M
3300006918\|Ga0079216_11348126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300009094\|Ga0111539_10111704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3206	Open in IMG/M
3300009094\|Ga0111539_13157784	Not Available	531	Open in IMG/M
3300009098\|Ga0105245_10421439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1338	Open in IMG/M
3300009100\|Ga0075418_10073474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3641	Open in IMG/M
3300009100\|Ga0075418_10448778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1382	Open in IMG/M
3300009100\|Ga0075418_11091022	Not Available	864	Open in IMG/M
3300009146\|Ga0105091_10111881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1258	Open in IMG/M
3300009147\|Ga0114129_12709710	Not Available	590	Open in IMG/M
3300009156\|Ga0111538_10008753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	13564	Open in IMG/M
3300009168\|Ga0105104_10957874	Not Available	505	Open in IMG/M
3300009176\|Ga0105242_10088911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2596	Open in IMG/M
3300009545\|Ga0105237_10859129	Not Available	914	Open in IMG/M
3300009610\|Ga0105340_1353943	Not Available	651	Open in IMG/M
3300009610\|Ga0105340_1360006	Not Available	645	Open in IMG/M
3300009840\|Ga0126313_10035076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3466	Open in IMG/M
3300009840\|Ga0126313_10392446	Not Available	1100	Open in IMG/M
3300010036\|Ga0126305_11026756	Not Available	566	Open in IMG/M
3300010037\|Ga0126304_10394220	Not Available	924	Open in IMG/M
3300010037\|Ga0126304_10806837	Not Available	637	Open in IMG/M
3300010038\|Ga0126315_10553038	Not Available	739	Open in IMG/M
3300010041\|Ga0126312_10000172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	32095	Open in IMG/M
3300010145\|Ga0126321_1436230	Not Available	720	Open in IMG/M
3300010999\|Ga0138505_100002950	Not Available	1599	Open in IMG/M
3300010999\|Ga0138505_100025663	Not Available	780	Open in IMG/M
3300011000\|Ga0138513_100000543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2777	Open in IMG/M
3300011000\|Ga0138513_100014226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1036	Open in IMG/M
3300012212\|Ga0150985_115166151	Not Available	551	Open in IMG/M
3300012469\|Ga0150984_118509634	Not Available	746	Open in IMG/M
3300012481\|Ga0157320_1007566	Not Available	780	Open in IMG/M
3300012488\|Ga0157343_1033123	Not Available	530	Open in IMG/M
3300012501\|Ga0157351_1061896	Not Available	517	Open in IMG/M
3300012507\|Ga0157342_1057484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300012507\|Ga0157342_1071545	Not Available	529	Open in IMG/M
3300012884\|Ga0157300_1047173	Not Available	667	Open in IMG/M
3300012891\|Ga0157305_10051294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300012892\|Ga0157294_10011070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1575	Open in IMG/M
3300012897\|Ga0157285_10030504	Not Available	1211	Open in IMG/M
3300012908\|Ga0157286_10166078	Not Available	716	Open in IMG/M
3300012908\|Ga0157286_10220604	Not Available	651	Open in IMG/M
3300012937\|Ga0162653_100019934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	896	Open in IMG/M
3300012937\|Ga0162653_100076613	Not Available	544	Open in IMG/M
3300012938\|Ga0162651_100001908	Not Available	1912	Open in IMG/M
3300012939\|Ga0162650_100039869	Not Available	745	Open in IMG/M
3300012939\|Ga0162650_100041256	Not Available	736	Open in IMG/M
3300012941\|Ga0162652_100025849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	851	Open in IMG/M
3300012951\|Ga0164300_10137041	Not Available	1129	Open in IMG/M
3300012957\|Ga0164303_10255133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1008	Open in IMG/M
3300012986\|Ga0164304_10705710	Not Available	767	Open in IMG/M
3300012987\|Ga0164307_10631088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	830	Open in IMG/M
3300012989\|Ga0164305_11291626	Not Available	637	Open in IMG/M
3300013306\|Ga0163162_11042734	Not Available	925	Open in IMG/M
3300013306\|Ga0163162_12349316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	613	Open in IMG/M
3300014497\|Ga0182008_10046988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2145	Open in IMG/M
3300014497\|Ga0182008_10715086	Not Available	573	Open in IMG/M
3300015077\|Ga0173483_10016577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2562	Open in IMG/M
3300015077\|Ga0173483_10471063	Not Available	663	Open in IMG/M
3300015200\|Ga0173480_10004323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5517	Open in IMG/M
3300015371\|Ga0132258_10233111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4487	Open in IMG/M
3300015371\|Ga0132258_10423500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3313	Open in IMG/M
3300015371\|Ga0132258_12104952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1418	Open in IMG/M
3300015374\|Ga0132255_104387443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	598	Open in IMG/M
3300017792\|Ga0163161_10253012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1374	Open in IMG/M
3300017965\|Ga0190266_10324232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	816	Open in IMG/M
3300017965\|Ga0190266_10532610	Not Available	693	Open in IMG/M
3300017965\|Ga0190266_10930621	Not Available	574	Open in IMG/M
3300018027\|Ga0184605_10220226	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300018028\|Ga0184608_10084576	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300018028\|Ga0184608_10134245	Not Available	1058	Open in IMG/M
3300018031\|Ga0184634_10443813	Not Available	586	Open in IMG/M
3300018051\|Ga0184620_10003537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	3120	Open in IMG/M
3300018051\|Ga0184620_10026948	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300018051\|Ga0184620_10252539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	592	Open in IMG/M
3300018054\|Ga0184621_10181850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	755	Open in IMG/M
3300018061\|Ga0184619_10204767	Not Available	907	Open in IMG/M
3300018061\|Ga0184619_10264687	Not Available	790	Open in IMG/M
3300018066\|Ga0184617_1012423	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300018066\|Ga0184617_1029910	Not Available	1282	Open in IMG/M
3300018067\|Ga0184611_1046023	Not Available	1443	Open in IMG/M
3300018067\|Ga0184611_1219594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	676	Open in IMG/M
3300018071\|Ga0184618_10240299	Not Available	765	Open in IMG/M
3300018073\|Ga0184624_10099972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1240	Open in IMG/M
3300018073\|Ga0184624_10161813	Not Available	988	Open in IMG/M
3300018073\|Ga0184624_10363896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300018076\|Ga0184609_10218631	Not Available	889	Open in IMG/M
3300018081\|Ga0184625_10083193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1639	Open in IMG/M
3300018081\|Ga0184625_10503297	Not Available	611	Open in IMG/M
3300018432\|Ga0190275_11261982	Not Available	814	Open in IMG/M
3300018465\|Ga0190269_10292722	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300018465\|Ga0190269_10660373	Not Available	721	Open in IMG/M
3300018465\|Ga0190269_11189739	Not Available	598	Open in IMG/M
3300018465\|Ga0190269_11308375	Not Available	580	Open in IMG/M
3300018466\|Ga0190268_10001768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4150	Open in IMG/M
3300018466\|Ga0190268_10485748	Not Available	832	Open in IMG/M
3300018466\|Ga0190268_10736226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300018466\|Ga0190268_11682287	Not Available	564	Open in IMG/M
3300018466\|Ga0190268_11981720	Not Available	534	Open in IMG/M
3300018469\|Ga0190270_10278412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1475	Open in IMG/M
3300018469\|Ga0190270_10398136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1273	Open in IMG/M
3300018469\|Ga0190270_11073748	Not Available	836	Open in IMG/M
3300018469\|Ga0190270_11994820	Not Available	638	Open in IMG/M
3300018476\|Ga0190274_10599365	Not Available	1127	Open in IMG/M
3300019254\|Ga0184641_1083991	Not Available	644	Open in IMG/M
3300019269\|Ga0184644_1502593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1410	Open in IMG/M
3300019356\|Ga0173481_10030932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1717	Open in IMG/M
3300019356\|Ga0173481_10052677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1407	Open in IMG/M
3300019767\|Ga0190267_10027955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1738	Open in IMG/M
3300019767\|Ga0190267_10080531	Not Available	1229	Open in IMG/M
3300019767\|Ga0190267_10407630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	762	Open in IMG/M
3300019767\|Ga0190267_10692499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	654	Open in IMG/M
3300019767\|Ga0190267_10716574	Not Available	647	Open in IMG/M
3300019869\|Ga0193705_1002436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4099	Open in IMG/M
3300019873\|Ga0193700_1061565	Not Available	572	Open in IMG/M
3300019875\|Ga0193701_1017642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1446	Open in IMG/M
3300019876\|Ga0193703_1012534	Not Available	1277	Open in IMG/M
3300019876\|Ga0193703_1025972	Not Available	905	Open in IMG/M
3300020005\|Ga0193697_1030638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1343	Open in IMG/M
3300020016\|Ga0193696_1114913	Not Available	685	Open in IMG/M
3300020020\|Ga0193738_1032592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1612	Open in IMG/M
3300021078\|Ga0210381_10108779	Not Available	907	Open in IMG/M
3300021510\|Ga0222621_1021212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1305	Open in IMG/M
3300021951\|Ga0222624_1379854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	846	Open in IMG/M
3300021951\|Ga0222624_1592743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1239	Open in IMG/M
3300022534\|Ga0224452_1003628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3681	Open in IMG/M
3300022694\|Ga0222623_10356191	Not Available	558	Open in IMG/M
3300022756\|Ga0222622_10039646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2584	Open in IMG/M
3300022892\|Ga0247753_1008135	Not Available	1054	Open in IMG/M
3300025901\|Ga0207688_10170038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1295	Open in IMG/M
3300025942\|Ga0207689_10428462	Not Available	1104	Open in IMG/M
3300026023\|Ga0207677_11119433	Not Available	718	Open in IMG/M
3300027523\|Ga0208890_1024305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	887	Open in IMG/M
3300027907\|Ga0207428_10000522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	45986	Open in IMG/M
3300028592\|Ga0247822_11660030	Not Available	543	Open in IMG/M
3300028704\|Ga0307321_1090464	Not Available	614	Open in IMG/M
3300028707\|Ga0307291_1096655	Not Available	735	Open in IMG/M
3300028717\|Ga0307298_10045210	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300028718\|Ga0307307_10133255	Not Available	770	Open in IMG/M
3300028718\|Ga0307307_10273239	Not Available	542	Open in IMG/M
3300028744\|Ga0307318_10036234	Not Available	1619	Open in IMG/M
3300028744\|Ga0307318_10063125	Not Available	1233	Open in IMG/M
3300028755\|Ga0307316_10017271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2279	Open in IMG/M
3300028771\|Ga0307320_10169018	Not Available	850	Open in IMG/M
3300028771\|Ga0307320_10313271	Not Available	624	Open in IMG/M
3300028778\|Ga0307288_10099808	Not Available	1057	Open in IMG/M
3300028778\|Ga0307288_10451883	Not Available	528	Open in IMG/M
3300028790\|Ga0307283_10173850	Not Available	605	Open in IMG/M
3300028807\|Ga0307305_10052120	All Organisms → cellular organisms → Bacteria	1884	Open in IMG/M
3300028814\|Ga0307302_10279095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	820	Open in IMG/M
3300028828\|Ga0307312_10019781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3823	Open in IMG/M
3300028828\|Ga0307312_10248744	Not Available	1150	Open in IMG/M
3300028876\|Ga0307286_10002453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5433	Open in IMG/M
3300028878\|Ga0307278_10464557	Not Available	554	Open in IMG/M
3300030830\|Ga0308205_1024910	Not Available	707	Open in IMG/M
3300030993\|Ga0308190_1106114	Not Available	622	Open in IMG/M
3300031058\|Ga0308189_10273145	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300031093\|Ga0308197_10300641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	591	Open in IMG/M
3300031094\|Ga0308199_1073108	Not Available	712	Open in IMG/M
3300031094\|Ga0308199_1202268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	501	Open in IMG/M
3300031198\|Ga0307500_10187932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	610	Open in IMG/M
3300031547\|Ga0310887_10616670	Not Available	666	Open in IMG/M
3300031548\|Ga0307408_100005542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	8435	Open in IMG/M
3300031548\|Ga0307408_100102663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2181	Open in IMG/M
3300031740\|Ga0307468_100078836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1867	Open in IMG/M
3300031852\|Ga0307410_10483043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1016	Open in IMG/M
3300031852\|Ga0307410_10762193	Not Available	820	Open in IMG/M
3300031938\|Ga0308175_101529434	Not Available	746	Open in IMG/M
3300032004\|Ga0307414_10115221	Not Available	2055	Open in IMG/M
3300032080\|Ga0326721_10676352	Not Available	635	Open in IMG/M
3300032174\|Ga0307470_10092848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1704	Open in IMG/M
3300032179\|Ga0310889_10500914	Not Available	616	Open in IMG/M
3300032205\|Ga0307472_102187338	Not Available	558	Open in IMG/M
3300033550\|Ga0247829_10905357	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	734	Open in IMG/M
3300033551\|Ga0247830_10703964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Luteipulveratus → Luteipulveratus mongoliensis	802	Open in IMG/M
3300034151\|Ga0364935_0061776	Not Available	1107	Open in IMG/M
3300034417\|Ga0364941_139215	Not Available	606	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.61%
Host-Associated	Host-Associated	23.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.55%
Plants	Host-Associated → Plants	23.39%
Aquatic	Environmental → Aquatic	16.05%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.05%
Sediment	Environmental → Aquatic → Sediment	12.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.55%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	4.59%
Freshwater	Environmental → Aquatic → Freshwater	3.67%
Floodplain	Environmental → Terrestrial → Floodplain	0.92%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.63%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	4.59%
Loam	Environmental → Terrestrial → Soil → Loam	4.13%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.29%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.46%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.63%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	4.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.21%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.38%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	33.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.50%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.21%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.21%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	3.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.75%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.29%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.38%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.92%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.92%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.46%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.46%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.46%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.46%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.46%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.46%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.46%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012481	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.1.yng.040610	Host-Associated	Open in IMG/M
3300012488	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610	Host-Associated	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_107957072	3300000550	Soil	MTLSSPDTPPDDVPEADWAEQTLDADPLAEGEAERQAQPVSVGQGIREADEADLVEQETVVYGEDDDLR*
F14TC_1037129631	3300000559	Soil	MTLSSPDSPPADVPEADWAEQALEADPQAEAEAEREVGPRPANVASVLREADDADLAEQETVVFVEDDDIR*
JGI10213J12805_101361002	3300000858	Soil	MTPSSSDTPPDEVPEADWAEQTLDVDPVADAESEPPAQPVTVGRGIREADDADLAEQEALVYGEDDDIRR*
JGI10213J12805_102558411	3300000858	Soil	MSLSSPDTPPSEVPEADWAEQAVAADPLAEAEAQPNAVPANIARGIREADDADLVEQETVVYGEDEDSR*
JGI10216J12902_1117597272	3300000956	Soil	MALSSSNTPPTDVPEADWAEQALDADPLAEAEEELVQPASTDRSLREVDDADLAEQETVAYVEDDDLRG*
JGI10216J12902_1194376612	3300000956	Soil	MTTPSSDTPPADVPEADWAEQALEADPLAEAEGESGPRPANVASVLREADDADLAEQEIVVYGEDEDVFR*
F14TB_1006478792	3300001431	Soil	MPLSTPDTPPTEVPEADWAEQTVAIDPSDEAETEPNAVPANISRGIREADDADLVEQETVVYGEDDDTR*
C688J35102_1207059092	3300002568	Soil	LITNVTVKELPMSLSSPDTPPTDVPEADWAEQAVAADPLAEADAEGEVSPRPANVASVLREADDADLAEQETVVYVDDDDVR*
JGIcombinedJ43975_101143492	3300002899	Soil	VDQTLITDVTVKELPMALSSPDTPPTEVPEADWAEQALEADPLAEAEAERGVGPRPANVASVLREADDADLAEQETVVFGEDDDIR*
soilL1_102171741	3300003267	Sugarcane Root And Bulk Soil	MTLSSPDTPPTDVPEADWAEQALDADPLAEADAEDEPGPRPANVASVLREADDADLAEQETVAYVGDDDLR*
JGI25407J50210_100399742	3300003373	Tabebuia Heterophylla Rhizosphere	MTLSSPDTPPTDVPEADWAEQALAADPLAEAEAEGELSPGPTNITSVLREADDADLAEQDTVVYVEDDDLRG*
JGI25405J52794_100270944	3300003911	Tabebuia Heterophylla Rhizosphere	MTLSSSDIPPDDVPEADWAEQTLDADPLAEGEAERPSQPVSVGGGIREADE
JGI25405J52794_100785561	3300003911	Tabebuia Heterophylla Rhizosphere	MTLSTPDTPPDDVPEADWAEQTLDADPLAEDEADQQAQPVSVGRGIREADEADVAEQETVVYGDDDLR*
Ga0062593_1011265681	3300004114	Soil	MALSSPDTPPTEVPEADWAEQALTADPLAEAEAESEAGPRPANVASVLREADDADLAEQETVVFVEDDDIRG*
Ga0062590_1017770111	3300004157	Soil	EADWAEQALEADPLAEAEAEREVGPRPANIAGVLREADDADLAEQETVVFVEDDDIRSGLAGFT
Ga0063356_1002593153	3300004463	Arabidopsis Thaliana Rhizosphere	MALSSSNTPPTDVPEADWAEQALEADPLAEAEEESMQPATTDRALREVDDADLAEQETVAYVEDDDNRS*
Ga0063356_1021025183	3300004463	Arabidopsis Thaliana Rhizosphere	MTISSPDTPPIDVPEADWAEQAVDVDPLAEAEAESDAVPAKIGRGIREVDDADLVEQETVVYGEDDDIRG*
Ga0063356_1048490771	3300004463	Arabidopsis Thaliana Rhizosphere	MTTPSSDTPPADVPEADWAEQALEADPLAEAEGESGPRPANVAGVLREADDADLAEQEIVVYGEDEDVFR*
Ga0062595_1000613914	3300004479	Soil	MTLSSSDTPPTDVPEADWAEQAAEADPLAEAEGEATQPAYSGRGIREVDDADLAEQETVAYVEDDDIR*
Ga0066810_100180322	3300005169	Soil	MTLSSPNTPPTDVPEADWAEQELDADPLAEGEEAQPAYSGRGIREVDEADLAEQETVAYVEDDDIRG*
Ga0066810_101542912	3300005169	Soil	MTISSPDSPPTEVPEADWAEQAVDVDPLAEAEAEPGAVPANIGRGIREVDDADLVEQETVVYGEDDDIR*
Ga0070682_1000243481	3300005337	Corn Rhizosphere	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENETAQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG*
Ga0068868_1011942852	3300005338	Miscanthus Rhizosphere	MTLSSPETPPMDVPEADWAEQALEADPLAEAEGEATQPAYSGRGIREVDDADLAEQETVAYVEDDDIR*
Ga0070692_111372771	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTLSSPDSPPTDVPEADWAEQAAEADPLAEAEGEATQPAYSGRGIREVDDADLAEQETVAYVEDDDIR*
Ga0070696_1005053372	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENDTTQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG*
Ga0070702_1001532162	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	LITNVTVKELPMTLSSPDSPPTDVPEADWAEQSAEADPLAEAEGEAAQPAYSGRGIREVDDADLAEQETVAYVEDDDIR*
Ga0070702_1016269721	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	SSDTPPADVPEADWAEQAVEADPLADAEAENETAQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG*
Ga0081455_1000354021	3300005937	Tabebuia Heterophylla Rhizosphere	MTLSSPDTPPDDVPEADWAEQTLDADPLAEDEADQQAQPVSVGRGIREADEADVAEQETVVYGDDDLR*
Ga0081455_100476263	3300005937	Tabebuia Heterophylla Rhizosphere	MTLSSPDTPPDDVPEADWAEQTVDADPLAEGEAERQAQPVSVGQGIREADEADLVEQETVVYGEDDDLR*
Ga0081455_100850343	3300005937	Tabebuia Heterophylla Rhizosphere	MTLSSPDTPPDDVPEADWAEQTVDADPLAEAEAERQEQPVSVGRSIREADEADLAEQESVVYGDDDDLR*
Ga0081455_103167672	3300005937	Tabebuia Heterophylla Rhizosphere	MSLSTPDTPPTEVPEADWAEQAVAVDPSAEADADPNAVPANISRGIREADDADLVEQETVVYGEDDDAR*
Ga0081455_104699172	3300005937	Tabebuia Heterophylla Rhizosphere	MTLPSSETPPADVPEADWAEQAVEADPLADADSEDESTQPAYVGRGLREVDDADLAEQEPPAYVEDDDARG*
Ga0081538_1000097527	3300005981	Tabebuia Heterophylla Rhizosphere	MTLSSPDTPPTDVPEADWAEQALAADPLAEAEAEGELSPGPTNIASVLREADDADLAEQDTVVYVEDDDLRG*
Ga0075432_100117844	3300006058	Populus Rhizosphere	MTLSSPDTPPTDVPEADWAEQALEADPLAEADAEGEPSLRPANVTSVLREADDADLAEQETVAYVGDDDLR*
Ga0082029_11570792	3300006169	Termite Nest	MSLSTPDTPPGEVPEADWAEQAVAVDPSAEADAEPNAVPANISRGIREADDADLVEQETVVYGEDDDAR*
Ga0075427_100142331	3300006194	Populus Rhizosphere	MTLSSPDSPPTDVPEADWAEQAAEADPLAEAEGEATQPAYSGRGIREVDDADLAEQETVAYVEDD
Ga0074047_111985023	3300006576	Soil	MTISSPDSPPTEVPEADWAEQAVDVDPLAEAEAEPGAVPANIGRGIREVDDADLVEQETV
Ga0074050_115715692	3300006577	Soil	MTISSPDSPPTEVPEADWAEQAVDVDPLAEADAEPGAVPANIGRGIREVDDADLVEQETVVYGEDDDIR*
Ga0074048_131859001	3300006581	Soil	MTLSSPNTPPTDVPEADWAEQELDADPLAEGEEAQPAYSGRGIREVDEADLAEQET
Ga0075428_1002964202	3300006844	Populus Rhizosphere	MTLSSPDTPPTDVPEADWAEQALEADPLAEADAEGEPGLRPANVTSVLREADDADLAEQETVAYVGDDDLR*
Ga0075431_1008779621	3300006847	Populus Rhizosphere	VPEADWAEQTLDADPLAEGEAERQAQPVSVGQGIREADEADLVEQETVVYGEDDDLR*
Ga0079217_101701302	3300006876	Agricultural Soil	MSLSNPDTPPTEVPEADWAEQAVAADPLAEAEAQPNGVPANIARGIREADDADLVEQETVVYGEDEESR*
Ga0079216_101177212	3300006918	Agricultural Soil	MSISSPDTPPTEVPEADWAEQAVVAYPLAEAEAQPNAVPADIRRGIREADDADLVEQETVVYGEDEDSR*
Ga0079216_113481262	3300006918	Agricultural Soil	MTLSSSDTPPDDVPEADWAEQTLDVDPVADAESEPLAQPVTVGRGIREADDADLAEQEALVYDEDDDIRR*
Ga0111539_101117044	3300009094	Populus Rhizosphere	LITNVTVKELPMTLSSPDTPPTDVPEADWAEQALEADPLAEADAEGEPGLRPANVTSVLREADDADLAEQETVAYVGDDDLR*
Ga0111539_131577841	3300009094	Populus Rhizosphere	SSPDSPPTDVPEADWAEQAAEADPLAEAEGEAAQPAYSGRGIREVDDADLAEQETVAYVEDDDIR*
Ga0105245_104214393	3300009098	Miscanthus Rhizosphere	DVPEADWAEQAVEADPLADAEAENETAQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG
Ga0075418_100734741	3300009100	Populus Rhizosphere	MSPSSPDSPPIEVPEADWAEQAVAVDPLAEGEAEPNAVPAFLSRSIREADDADLVEQETPVYGEDDDNR*
Ga0075418_104487782	3300009100	Populus Rhizosphere	MPLSTPETPPTEVPEADWAEQTVAIDPLDEDEAEPNAVPANISRGIREADDADLVEQETVVYGEDDDTR*
Ga0075418_110910222	3300009100	Populus Rhizosphere	DQTLISNVTVKELPMTLSSPDTPPTDVPEADWAEQALEADPLAEADAEGEPGLRPANVTSVLREADDADLAEQETVAYVGDDDLR*
Ga0105091_101118812	3300009146	Freshwater Sediment	MTISSPDTPPTEVPEADWAEQTVDVDPLAEAEAEPDAVPANIGPGLREVDDADLVEQETVVYGEDDDNR*
Ga0114129_127097101	3300009147	Populus Rhizosphere	TDVPEADWAEQALEADPLAEADAEGEPGLRPANVTSVLREADDADLAEQETVAYVGDDDLR*
Ga0111538_100087532	3300009156	Populus Rhizosphere	LITNVTVKELPMTLSSPDTPPTDVPEADWAEQALEADPLAEADAEGEPSLRPANVTSVLREADDADLAEQETVAYVGDDDLR*
Ga0105104_109578742	3300009168	Freshwater Sediment	MTISSPDSPPTEVPEADWAEQAVDVAPLAEAEDEPNAVPANIGRGIREVDDADLVEQETVVYGEDDDLRG*
Ga0105242_100889112	3300009176	Miscanthus Rhizosphere	LITNVTVKELPMTLSSPDSPPTDVPEADWAEQAAEADPLAEAEGEATQPAYSGRGIREVDDADLAEQETVAYVEDDDIR*
Ga0105237_108591292	3300009545	Corn Rhizosphere	MTLSSPDSPPTDVPEADWAEQAAEADPLAEAVGEATQPAYSGRGIREVDDADLAEQETVAYVEDDDIR*
Ga0105340_13539432	3300009610	Soil	MSISSPNTPPTEVPEPDWAEQAVTADPLAEDEVEPTAVPAYIRRGIREADDADLVEQETPVYGEDDDIR*
Ga0105340_13600062	3300009610	Soil	MSISSPDTPPTEVPEADWAEQAVTADPLAEAEAEPNAVPAYLRRGIREADDADLVEQETPVYGEDD
Ga0126313_100350762	3300009840	Serpentine Soil	MSPSSPDTPPIEVPEADWAEQAVAVDPLAEADAEPNGNAVPANISRGIREADDADLVEQEIPVYGEDDDSR*
Ga0126313_103924462	3300009840	Serpentine Soil	MPVSSPDTPPIDVPEADWAEQAAEADPLAEAEEELPQPANIGRGLREVDDADLVEQETVVYVDDEDSRG*
Ga0126305_110267561	3300010036	Serpentine Soil	MSPSSPDTPPIEVPEADWAEQAVAVDPLAEADADAEPNGNAVPANISRGIREADDADLVEQETPVYGEDDDSR*
Ga0126304_103942202	3300010037	Serpentine Soil	MSPSSPDTPPIEVPEADWAEQAVAVDPLAEADADAEPNGNAVPANISRGIREADDADLVEQEIPVYGEDDDSR*
Ga0126304_108068371	3300010037	Serpentine Soil	MTLSGSDTPPDDVPEADWAEQTLDVDPVADAVSEPLAQPVTVGRGIREADDADLAEQEALVYDEDDDIRR*
Ga0126315_105530382	3300010038	Serpentine Soil	MSLSSPDTPPTEVPEADWAEQAVAADPLAEAEAQPNAVPADIGRGIREADDADLVEQETVVYGEDED
Ga0126312_1000017221	3300010041	Serpentine Soil	LITDVTVKELPMALSSPDTPPTDVPEADWAEQALEADPLAEAEAESEVRQGPAKIHSVLREVDDADLAEQETVAYVEDDDIR*
Ga0126321_14362302	3300010145	Soil	MTLSSPDTPPDDVPEADWAEQTLDADPLAEGEAERQAQPASVGRVSREADEADLVEQETVVYGEDDDLR*
Ga0138505_1000029501	3300010999	Soil	MTISSPDTPPDDVPEADWAEQTVDADPLAEAEAERQAQPVSVGRGIREADEADLVEQETVVYGEDDDLR
Ga0138505_1000256631	3300010999	Soil	VDQTLITDVTVKELPMALSSPDTPPTEVPEADWAEQALEADPLAEAEAEREVGPRPANIAGVLREADDADLAEQETVVFVEDDDIR*
Ga0138513_1000005433	3300011000	Soil	MTLPSSDTPPADVPEADWAEQAVEADPLVDAEAEDDSAQPAYVGRGLREVDDADLAEQETPAYVEDDDVRG*
Ga0138513_1000142262	3300011000	Soil	MTISSSDTPPTEVPEADWAEQTVDVDPLAEAEAEPDAVPANIGPGLREVDDADLVEQETVVYGEDDDNR*
Ga0150985_1151661511	3300012212	Avena Fatua Rhizosphere	MTLSGPDTPPTDVPEADWAEQALEADPLAEAEAESELSPRPGNVASVLREADDADLADQEKVVYGEDEDVFR*
Ga0150984_1185096342	3300012469	Avena Fatua Rhizosphere	NVTVKELPMSLSSPDTPPTDVPEADWAEQAVAADPLAEADAEGEVSPRPANVASVLREADDADLAEQETVVYVDDDDVR*
Ga0157320_10075661	3300012481	Arabidopsis Rhizosphere	MTLPSSDTPPADVPEADWAEQAVEADPLAGEDSEDDTTQAAYVGRGLREVDDADLVEQETPAYVEDDDVRG*
Ga0157343_10331231	3300012488	Arabidopsis Rhizosphere	MALSSPNTPPTDVPEADWAEQELEADPLAEAEGDEAQPAYSGRGIREVDEADLAEQETVAYVEDDD
Ga0157351_10618961	3300012501	Unplanted Soil	TPPADVPEADWAEQAVEADPLAGEDSEDDTTQAAYVGRGLREVDDADLVDQETPAYVEDDDVRG*
Ga0157342_10574841	3300012507	Arabidopsis Rhizosphere	MTLSSPNTPPTDVPEADWAEQELEADPLAEAEGDEAQPAYSGRGIREVDEADLAEQETVAYVEDDDIRG*
Ga0157342_10715451	3300012507	Arabidopsis Rhizosphere	MTIPSSDTPPADVPEADWVEQAVDAGPLSEEDIELESAQAAYLGRGLREVDDADLAEQETPAYGEDDDARR*
Ga0157300_10471731	3300012884	Soil	MTTPSSDTPPADVPAADWAEQALEADPLAEAEGESGPRPANVAGVLREADDADLAEQEIVVYGEDEDVFR*
Ga0157305_100512941	3300012891	Soil	VDQTLITDVTVKELSVALSSPDTPPTEVPEADWAEQALTADPLAEAEAESEAGPRPANVASVLREADDADLAEQETVVFVEDDDIRG*
Ga0157294_100110702	3300012892	Soil	VTVKELPMALSSPDTPPTEVPEADWAEQALTADPLAEAEAESEAGPRPANVASVLREADDADLAEQETVVFVEDDDIRG*
Ga0157285_100305042	3300012897	Soil	VDQTLITDVTVKELPMALSSPDTPPTEVPEADWAEQALEADPQAEAEAEREVGPRPANVASVLREADDADLAEQETVVFVEDDDIR*
Ga0157286_101660782	3300012908	Soil	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENDTTQPAYVGRGLREVDDADLVEQETLAYVEDDDGRG
Ga0157286_102206041	3300012908	Soil	VTVKELPMALSSPDTPPTEVPEADWAEQALEADPLAEAEAEREVGPRPANIAGVLREADDADLAEQETVVFVEDDDIR*
Ga0162653_1000199342	3300012937	Soil	MTLPSSDTPPADVPEADWAEQAVEADPLVDAEAEDDSAQPEYVGRGLREVDDADLAEQETPAYVEDDDVRG*
Ga0162653_1000766132	3300012937	Soil	MTTSSPDSPPTEVPEADWAEQATDVDPLAEAEGESDAVPANIGRGIREVDDADLVEQETVVYGEDDDIRG*
Ga0162651_1000019082	3300012938	Soil	PDTPPTEVPEADWAEQALEADPLAEAEAEREVGPRPANIAGVLREADDADLAEQETVVFVEDDDIR*
Ga0162650_1000398691	3300012939	Soil	MTISSPDTPPTEVPEADWAEQAVDADPLAEVEAESGAVPANIGRGIREVDDADLVEQETVVYGEDDDIRG*
Ga0162650_1000412561	3300012939	Soil	LITDVTVKELPMALSSPDTPPTEVPEADWAEQALEADPQAEAEAEREVGPRPANIASVLREADDADLAEQETVVFVEDDDIR*
Ga0162652_1000258491	3300012941	Soil	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENETTQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG*
Ga0164300_101370411	3300012951	Soil	MTLPSSDTPPAEVPEADWAEQAVEADPLAGADAEDDTTQPAYVGRGLREVDDADLVEQETPAYVEDDDVRG*
Ga0164303_102551332	3300012957	Soil	MTLSSPNTPPTDVPEADWAEQELDADPLAEAEGEEAQPAYSGRGIREVDEADLAEQETVAYVEDDDIRG*
Ga0164304_107057101	3300012986	Soil	MTLPSFDTPPADVPEADWAEQAVEADPLADAEAENDTTQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG*
Ga0164307_106310882	3300012987	Soil	DTPPADVPEADWAEQAVEADPLADAEAENDTTQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG*
Ga0164305_112916261	3300012989	Soil	MTLPSFDTPPADVPEADWAEQAVEADPLAGADAEDDTTQPAYVGRGLREVDDADLVEQETPAYVEDDDVRG*
Ga0163162_110427343	3300013306	Switchgrass Rhizosphere	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENDTTQPAYVGRGLREVDDADLVEQETPAYV
Ga0163162_123493161	3300013306	Switchgrass Rhizosphere	TNVTVKELPMTLSSPDSPPTDVPEADWAEQSAEADPLADAAGEAAQPAYSGPGAREVDDADLAEQETVAYVEDDDIR*
Ga0182008_100469881	3300014497	Rhizosphere	TDVPEADWAEQALVADPAAEADAEAEVSPRPTNVASVLREADDADLAEQETVVYVEDDDLR*
Ga0182008_107150861	3300014497	Rhizosphere	MTLSSPDTPPTDVPEADWAEQALAADPLDEAQAEVELGPRPANVASVLREADDADLAEQG
Ga0173483_100165774	3300015077	Soil	MTIPSSDTPPADVPEADWAEQAADAGPLSEEEIELESAQAAYLGRGLREVDDADLAEQETPAYSEDDDARR*
Ga0173483_104710631	3300015077	Soil	PADVPEADWAEQALEADPLAEAEGESGPRPANVAGVLREADDADLAEQEIVVYGEDEDVFR*
Ga0173480_100043235	3300015200	Soil	VTVKELPMALSSPDTPPTEVPEADWAEQALTADPLAEAEAESEAGPRPANVASVLREADDADLAEQETVVFGEDDDIRG*
Ga0132258_102331112	3300015371	Arabidopsis Rhizosphere	MALSSPNTPPTDVPEADWAEQELEADPLAEAEGDEAQPAYSGRGIREVDEADLAEQETVAYVEDDDIRG*
Ga0132258_104235004	3300015371	Arabidopsis Rhizosphere	LITNVTVKELPMTLSSPDTPPTDVPEADWAEQALEADPLAEADAEGEPGPRPANVASVLREADDADLAEQETVAYVGDDDLR*
Ga0132258_121049523	3300015371	Arabidopsis Rhizosphere	LITNVTFKELPMTISSPDTPPTDVPEADWAEQAAEADPLAEAEGEAAQPAYSGRGIREVDDADLAEQETVAYVEDDDIR*
Ga0132255_1043874431	3300015374	Arabidopsis Rhizosphere	TLITNVTFKELPMTISSPDTPPTDVPEADWAEQAAEADPLAEAEGEAAQPAYSGRGIREVDDADLAEQETVAYVEDDDIR*
Ga0163161_102530123	3300017792	Switchgrass Rhizosphere	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENETAQPAYVGRGLREVDDADLVEQETPAYV
Ga0190266_103242322	3300017965	Soil	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENDTTQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG
Ga0190266_105326101	3300017965	Soil	MTISSPDTPPDDVPEADWAEQTVDADPLAEADAERQAQPVSVGAGIREADEADLVEQETVVYGEDDDLR
Ga0190266_109306212	3300017965	Soil	MTISSPDTPPTEVSEADWAEQTVDVDPLAEAEAEPDAVPANIGPGLREVDDADLVEQETVVYGEDDDNR
Ga0184605_102202262	3300018027	Groundwater Sediment	MTLPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETVAYIEDDDVRG
Ga0184608_100845761	3300018028	Groundwater Sediment	MTLPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETVAYVEDDDVRG
Ga0184608_101342452	3300018028	Groundwater Sediment	MTISSSDTPPAEVHEADWAEQAVDVDPLAEAEAESDAVPANIGRGIREVDDADLVEQETVVYGEDDDIRG
Ga0184634_104438131	3300018031	Groundwater Sediment	TISSPDTPPTEVPEADWAEQAVDVDPLAEAEAESDAVPAYIGRGIREVDDADLVEQETVVYGEDDDIRG
Ga0184620_100035372	3300018051	Groundwater Sediment	MALSSPDTPPTEVPEADWAEQALEADPLAEAEAELEVGPRPANIAGVLREADDADLAEQETVVFVEDDDIR
Ga0184620_100269483	3300018051	Groundwater Sediment	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENDTTQPAYVGRGLREVDDADLAEQETPAYVEDDDVRG
Ga0184620_102525392	3300018051	Groundwater Sediment	LPSSDTPPADVPEADWAEQAVEADPLADAEAENETAQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG
Ga0184621_101818501	3300018054	Groundwater Sediment	MTLPSSDTPPADVPEADWAEQAVEADPLVDAEAEDDSAQPAYVGRGLREVDDADLAEQETPAYVEDDDVRG
Ga0184619_102047671	3300018061	Groundwater Sediment	MTLPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETVAYIEDDDVR
Ga0184619_102646872	3300018061	Groundwater Sediment	MTLSSPNTPPTDVPEADWAEQELEADPPAEAEGEAAQPAYSGRGIREVDDADLAEQETVAYVEDDDIR
Ga0184617_10124232	3300018066	Groundwater Sediment	PSSDTPPADVPEADWAEQALEADPLAEAEGESGPRPANVAGVLREADDADLAEQGIVVYGEDEDVFR
Ga0184617_10299102	3300018066	Groundwater Sediment	LITDVTVKELHMALSSPDTPPTEVPEADWAEQALEADPQAEAEAEREVGPRPANIASVLREADDADLAEQETVVFVEDDDIR
Ga0184611_10460233	3300018067	Groundwater Sediment	MTTSSPDSPPTEVPEADWAEQATDVDPLAAAESDAVPANIGRGIRAVDDADLVEQETVVYGEDDDIRG
Ga0184611_12195942	3300018067	Groundwater Sediment	MTLPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYGDRGLREGDDADLAEQETVAYVEDDDVRG
Ga0184618_102402992	3300018071	Groundwater Sediment	MTTSSPDSPPTEVPEADWAEQATDVDPLAEAESDAVLANIGRGIREVDDADLVEQETVVYGED
Ga0184624_100999722	3300018073	Groundwater Sediment	MTLPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETLAYVEDDDVRG
Ga0184624_101618132	3300018073	Groundwater Sediment	MTLSGPDTPPDDVPEADWAEQTLDADPLAEAEAERQAQPVRVGRGMREADEADVAEQETVVYGEDDDIR
Ga0184624_103638961	3300018073	Groundwater Sediment	MSISSPDTPPTEVPEADWAEQAIAADPLAEAEAQPNAVPANIGRGIREADDADLVEQETVVYGEDDEIR
Ga0184609_102186312	3300018076	Groundwater Sediment	MSISSPQTPPTEVPEADWAEQAVTADPLAEAEPNAVPAYIRRGIREADDADLVEQETAVYGEDDDIR
Ga0184625_100831932	3300018081	Groundwater Sediment	MSISSPDTPPTEVPEADWAEQAVAADPLAEAEAQPNAVPANIGRGIREADDADLVEQETVVYGEDDEIR
Ga0184625_105032971	3300018081	Groundwater Sediment	MTLSSSDTPPADVPEADWAEQAVEADPLADAEAENETAQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG
Ga0190275_112619821	3300018432	Soil	SPDSPPIEVPEADWAEQAVAVDPVAEGEAEPNAVPAYLSRGIREADDADLVEQETPVYGEDDDNR
Ga0190269_102927221	3300018465	Soil	SDTPPADVPEADWAEQALEADPLAEAEGESGPRPANVAGVLREADDADLAEQGIVVYGEDEDVFR
Ga0190269_106603731	3300018465	Soil	MTISSPDSPPTEVSEADWAEQTVDVDPLAEAEAEPDAVPANIGPGLREVDDADLVEQETVVYGEDDDNR
Ga0190269_111897391	3300018465	Soil	MTLSSPDTPPDDVPEADWAEQTLDADPLAEADAERQAQPVSVGAGIREADEADLVEQETVVYGEDDDLR
Ga0190269_113083751	3300018465	Soil	MTLSSPDTPPTDVPEADWAEQALEADPLAEAEREVGPRPANVASVLREADDADLAEQETVVFVEDDDIR
Ga0190268_100017682	3300018466	Soil	MPPSSPDSPPIEVPEADWAEQAVAVDPLAEGEAEPNAVPAYLSRGIREADDADLVEQETPVYGEDDDNR
Ga0190268_104857482	3300018466	Soil	MTLSSPDTPPTDVPEADWAEQALEANPLAEAEGDSGPRPTNVASVLREADDADLAEQEIVVYGEDEDVSR
Ga0190268_107362262	3300018466	Soil	MSLSSSDTPPTEVPEADWAEQAVAADPLAEAEAQPNGVPANIARGIREADDADLVEQETVVYGEDEDSR
Ga0190268_116822871	3300018466	Soil	MTISSPDSPPTEVSEADWAEQAVDVDPLAEAETESNAVPANIGRGIREVDDADLVEQETVVYGEDDDGR
Ga0190268_119817201	3300018466	Soil	PSRSAMTLSSPDTPPDDVPEADWAEQTLDADPLAEGEAERQAQPVSVGQGIREADEADLVEQETVVYGEDDDLR
Ga0190270_102784121	3300018469	Soil	MPPSSPDSPPIEVPEADWAEQAVAVDPVAEGEAEPNAVPAYLSRGIREADDADLVEQETPVYGEDDDNR
Ga0190270_103981361	3300018469	Soil	MSISSPDSPPTEVPEADWAEQAVAADPLADAEAQPSAVPANIRRGIREADDADLVEQETVVYGEDDDIR
Ga0190270_110737482	3300018469	Soil	MTTSSPDTPPTEVPEADWAEQTVDVDPLAEAEAESNAVPANIGPGIREVDDADLVEQETVVYGEDDDNR
Ga0190270_119948201	3300018469	Soil	MSISSPQTPPTEVPEADWAEQAVTADPLAEAEAEPNAVPAYIRRGIREADDADLVEQETPVYGEDDDIR
Ga0190274_105993652	3300018476	Soil	MTISSPDTPPTEVPEADWAEQTVDVDPLAEAEAEPDAVPANIGPGLREVDDADLVEQETVVYGEDDDNR
Ga0184641_10839911	3300019254	Groundwater Sediment	MALSSPDTPPTEVPEADWAEQALEADPLAEAEAEREVGPRPANIAGVLREADDADLAEQETVVFVEDDDIR
Ga0184644_15025931	3300019269	Groundwater Sediment	RCDRQGAPMTLPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETLAYVEDDDVRG
Ga0173481_100309323	3300019356	Soil	MALSSPDTPPTEVPEADWAEQALTADPLAEAEAESEAGPRPANVASVLREADDADLAEQETVVFGEDDDIRG
Ga0173481_100526772	3300019356	Soil	MALSSSNTPPTDVPEADWAEQALDADPLAEAEEELVQPASTDRSLREVDDADLAEQETVAYVEDDDLRG
Ga0190267_100279552	3300019767	Soil	TDVTVKELPMALSSPDTPPTEVPEADWAEQALEADPQAEAEAEREVGPRPANVASVLREADDADLAEQETVAFVEDDDIR
Ga0190267_100805312	3300019767	Soil	MTLSSPDTPPDDVPEADWAEQTVDADPLAEAEAERQAQPVSVGRGIREADEADLVEQETVVYGEDDDLR
Ga0190267_104076301	3300019767	Soil	MTLPSSDTPPAEVPEADWAEQAVEADPLVDAEAEDDSAQPAFVGRGLREVDDADLAEQETPAYVEDDDVRG
Ga0190267_106924992	3300019767	Soil	MTISSSDTPPAEVPEADWAEQAVDVDPLAEAEAESDAVPANIGRGIREVDDADLVEQETVVYGEDDDIRG
Ga0190267_107165741	3300019767	Soil	MSPSSPDTPPIEVPEADWAEQAVAVDPLAEAEAEANGVPANISRGIREADDADLVE
Ga0193705_10024362	3300019869	Soil	MILPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETLAYVEDDDVRG
Ga0193700_10615651	3300019873	Soil	MTLPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETLAY
Ga0193701_10176422	3300019875	Soil	MALSSPDTPPTEVPEADWAEQALEADPLAEAEAEAEREVGPRPAHIAGVLREADDADLAEQETVVFVEDDDIR
Ga0193703_10125341	3300019876	Soil	MTLPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETVAYVEDDD
Ga0193703_10259721	3300019876	Soil	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENDTTQPAYVGRGLREVDDADLVEQETPAYVED
Ga0193697_10306382	3300020005	Soil	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENETAQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG
Ga0193696_11149131	3300020016	Soil	MTISSSDTPPTEVPEADWAEQTVDVDPLAEAEAEPDAVPANIGPGLREVDDADLVEQETVVYGEDDDNR
Ga0193738_10325921	3300020020	Soil	MTISSPDTPPTEVSEADWAEQTVDVDPLAEAEAESNAVPANIGPGIREVDDADLVEQETVVYGEDDDNR
Ga0210381_101087792	3300021078	Groundwater Sediment	MALSSPDTPPTEVPEADWAEQALEADPLAEAEAEREVGPRPANIAGVLREADDADLAEQETVVFVEDDDVR
Ga0222621_10212121	3300021510	Groundwater Sediment	MILPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETVAYIEDDDVRG
Ga0222624_13798542	3300021951	Groundwater Sediment	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENDTTQPAYVGRGLREVDDADLVEQETPAYVEDDDGQQYR
Ga0222624_15927431	3300021951	Groundwater Sediment	HRCDRQGAPMTLPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETVAYVEDDDVRG
Ga0224452_10036285	3300022534	Groundwater Sediment	MTTSSPDSPPTEVPEADWAEQATDVDPLAEAESDAVPANIGRGIREVDDADLVEQETVV
Ga0222623_103561911	3300022694	Groundwater Sediment	MTLPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETVAYIEDDD
Ga0222622_100396462	3300022756	Groundwater Sediment	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENETTQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG
Ga0247753_10081352	3300022892	Soil	MALSSPDTPPTEVPEADWAEQALTADPLAEAEAESEAGPRPANVASVLREADDADLAEQETVVFVEDDDIRG
Ga0207688_101700382	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTLSSPDSPPTDVPEADWAEQAAEADPLAEAEGEATQPAYSGRGIREVDDADLAEQETVAYVEDDDIR
Ga0207689_104284621	3300025942	Miscanthus Rhizosphere	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENETAQPAYVGRGLREVDDADLVEQ
Ga0207677_111194331	3300026023	Miscanthus Rhizosphere	MTLSSPDSPPTDVPEADWAEQSAEADPLAEAEGEAAQPAYSGRGIREVDDADLAEQETVA
Ga0208890_10243053	3300027523	Soil	MTLSSPNTPPTDVPEADWAEQELDADPLAEGEEAQPAYSGRGIREVDEADLAEQETVAYVEDDDIRG
Ga0207428_1000052226	3300027907	Populus Rhizosphere	MTLSSPDTPPTDVPEADWAEQALEADPLAEADAEGEPSLRPANVTSVLREADDADLAEQETVAYVGDDDLR
Ga0247822_116600301	3300028592	Soil	MTLSSPDSPPTDVPEADWAEQAAEADPLAEAEGEATQPAYPGRGIREVDDADLAEQETVAYVEDDDIR
Ga0307321_10904642	3300028704	Soil	MTLSSPDTPPTDVPEADWAEQALEADPLAEAEAESEVSPRPANVASVLREADDADLAEQGTVVYGEDEDVFR
Ga0307291_10966552	3300028707	Soil	MTLSSPNTPPTDVPEADWAEQELEADPLAEGEEAQPAYSGRGIREVDDADLAEQETVAYVEDDDIR
Ga0307298_100452101	3300028717	Soil	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENDTTQPAYVGRGLREVDDADLVEQETPAYVEDDDGRGQQYR
Ga0307307_101332551	3300028718	Soil	EVPEADWAEQATDVDPLAEAESDAVPANIGRGIREVDDADLVEQETVVYGEDDDIRG
Ga0307307_102732391	3300028718	Soil	SSPNTPPTDVPEADWAEQELEADPLAEAEGEEAQPAYSGRGIREVDDADLAEQETVAYVEDDDIR
Ga0307318_100362343	3300028744	Soil	VDQTLITDVTVKELPMALSSPDTPPTEVPEADWAEQALEADPLAEAEAEREVGPRPANIAGVLREADDADLAEQETVVFVEDDDIR
Ga0307318_100631251	3300028744	Soil	MTTPSSDTPPADVPEADWAEQALEADPLAEAEGESGPRSANVAGVLREADDADLAEQGIVVYGEDEDVFR
Ga0307316_100172713	3300028755	Soil	MTFPSSDTPPADVPEADWAEQAVEADPLADAEAENETTQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG
Ga0307320_101690181	3300028771	Soil	MTLSGPDTPPDDVPEADWAEQTLDADPLAEDEAERQAEPVRVGRGMREADEADVAEQETVVYGEDDDIR
Ga0307320_103132712	3300028771	Soil	MTISSSDTPPAEVSEADWAEQAVDVDPLAEAEAESDAVPANIGRGIREVDDADLAEQETVVYGEDDDIRG
Ga0307288_100998081	3300028778	Soil	MTLSSPNTPPTDVPEADWAEQELEADPLAEGEEAQPAYSGRGIREVDDADLAEQETVAYV
Ga0307288_104518832	3300028778	Soil	MTTPSSDTPPADVPEADWAEQALEADPLAEAEGESGPRPANVAGVLREADDADLAEQGIVVYGEDEDVFR
Ga0307283_101738501	3300028790	Soil	MTLSSPNTPPTDVPEADWAEQELEADPLAEAEGEEAQPAYSGRGIREVDDADLAEQETVAYVEDDDIR
Ga0307305_100521203	3300028807	Soil	MTLPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETLAYIEDDDVRG
Ga0307302_102790951	3300028814	Soil	MTLPSSDTPPADVPEADWAEQAVEADPLVDAEAEGDSAQPAYVGRGLREVDDADLAEQETPAYVEDDDVRG
Ga0307312_100197811	3300028828	Soil	MALSSPDTPPTEVPEADWAEQALEADPLAEAEAEREVGPRPANIASVLREADDADLADQETVVFVEDDDIR
Ga0307312_102487442	3300028828	Soil	MTLSSPNTPPTDVPEADWAEQELEADPLAEAEGEDAQPAYSGRGIREVDEADLAEQETVAYVEDDDIRG
Ga0307286_100024533	3300028876	Soil	MALSSPDTPPTEVPEADWAEQALEADPLAEAEAELEVGPRPANIAGVLREADDADLAEQETVVFVEDDDVR
Ga0307278_104645571	3300028878	Soil	MALSSPDTPPTEVPEADWAEQALEADPLAEAEAEREVGPRPANIASVLREADDADLAEQ
Ga0308205_10249102	3300030830	Soil	MALSSPDTPPTEVPEADWAEQALEADPLAEAEAEREVGPRPANIASVLREADDADLAEQETVVFVEDDDVR
Ga0308190_11061142	3300030993	Soil	TVKELPMALSSPDTPPTEVPEADWAEQALEADPLAEAEAEREVGPRPANIAGVLREADDADLAEQETVVFVEDDDIR
Ga0308189_102731451	3300031058	Soil	PPADVPEADWAEQAVEADPLADAEAENETAQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG
Ga0308197_103006412	3300031093	Soil	LPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETVAYVEDDDVRG
Ga0308199_10731081	3300031094	Soil	TDVTVKELPMALSSPDTPPTEVPEADWAEQALEADPLAEAEAEREVGPRPANIAGVLREADDADLAEQETVVFVEDDDIR
Ga0308199_12022681	3300031094	Soil	DRQGAPMTLPSSDTPPADVPEADWAEQAVGADPLADAEAENESAQSGYVDRGLREVDDADLAEQETVAYVEDDDVRG
Ga0307500_101879322	3300031198	Soil	MTLPSSDTPPADVPEADWAEQAVEADPLADAEAENDSTQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG
Ga0310887_106166701	3300031547	Soil	MTLSSPDSPPTDVPEADWAEQAAEADPLAEAEGEATQPAYSGRGIREVDDADLAEQETVAYVEDDDI
Ga0307408_1000055428	3300031548	Rhizosphere	MALSSPDTPPTDVPEADWAEQALEADPLAEAEAESEVRQGPAKIDSVLREVDDADLAEQETVAYVEDDDIR
Ga0307408_1001026632	3300031548	Rhizosphere	MSLSSPDTPPTEVPEADWAEQAVAADPLAEAEAQPNAVPADIGRGIREADDADLVEQETVVYGEDEDSR
Ga0307468_1000788362	3300031740	Hardwood Forest Soil	MTLSSPDSPPTDVPEADWAEQSAEADPLAEAEGEAAQPAYSGRGIREVDDADLAEQETVAYVEDDDIR
Ga0307410_104830433	3300031852	Rhizosphere	MSLSSPDTPPTEVPEADWAEQAVAADPLAEAEAQPNAVPADIGRGIREADDADLVEQETVVYGE
Ga0307410_107621931	3300031852	Rhizosphere	MTLSGSDTPPDDVPEADWAEQTLDVDPVADAVSEPLAQPVTVGRGIREADDADLAEQEALVYDEDDDIRR
Ga0308175_1015294341	3300031938	Soil	MTTPSSDTPPADVPEADWAEQALEADPMAEAEGESGPRPANVASVLREADDADLAEQEIVVYGEDEDVFR
Ga0307414_101152211	3300032004	Rhizosphere	LITDVTVKELPMALSSPDTPPTDVPEADWAEQALEADPLAEAEAESEVRQGPAKIDSVLREVDDADLAEQETVAYVEDDDIR
Ga0326721_106763521	3300032080	Soil	DSPPANVPEADWAEQTLEADPLAEAEAGAESGPRPANVASVLREADDADLAEQDTVVFVEDDDLRS
Ga0307470_100928482	3300032174	Hardwood Forest Soil	MTLSSPDTPPTDVPEADWAEQAAEADPLAEAEGEAAQPAYSGRGIREVDDADLAEQETVAYVEDDDIR
Ga0310889_105009141	3300032179	Soil	MTLSSPDSPPTDVPEADWAEQAAEADPLAEAEAEATQPAYSGRGIREVDDADLAEQETVAYVEDDDIR
Ga0307472_1021873381	3300032205	Hardwood Forest Soil	LITDVTVKEPPMTLPSSDTPPADVPEADWAEQAVEADPLAGADAEDDTTQPAYVGRGLREVDDADLVEQETPAYVEDDDGRG
Ga0247829_109053572	3300033550	Soil	MTLPSSDTPPADVPEADWAEQAVDADPLVDAEAEDDTAQPAYVGRGLREVDDADLAEQETPAYVEDDDVRG
Ga0247830_107039641	3300033551	Soil	DVPEADWAEQAAEADPLAEAEGEATQPAYSGRGIREVDDADLAEQETVAYVEDDDIR
Ga0364935_0061776_462_665	3300034151	Sediment	MTTSSSDTPPTEVPEADWAEQTVDVDPLAEAESNAVPANIGPGIREVDDADLVEQETVVYGEDDDNR
Ga0364941_139215_338_547	3300034417	Sediment	MSISSPNTPPTEVPEADWAEQAVTADPLAEDEVEPTAVPAYIRRGIREADDADLVEQETPVYGEDEDVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F021643

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences