NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F021110

Metagenome / Metatranscriptome Family F021110

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F021110
Family Type Metagenome / Metatranscriptome
Number of Sequences 220
Average Sequence Length 47 residues
Representative Sequence DKNLTRAIVFSSMYKIALAKMREGMKCQVVLSKLDDGTLMIKEIK
Number of Associated Samples 168
Number of Associated Scaffolds 220

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 2.27 %
% of genes near scaffold ends (potentially truncated) 95.45 %
% of genes from short scaffolds (< 2000 bps) 86.36 %
Associated GOLD sequencing projects 158
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (86.818 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater
(13.636 % of family members)
Environment Ontology (ENVO) Unclassified
(42.273 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(61.818 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.70%    β-sheet: 24.66%    Coil/Unstructured: 61.64%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 220 Family Scaffolds
PF03819MazG 32.73
PF00154RecA 29.55
PF00436SSB 1.36
PF136402OG-FeII_Oxy_3 0.91
PF12705PDDEXK_1 0.91
PF07733DNA_pol3_alpha 0.45
PF02627CMD 0.45
PF00037Fer4 0.45

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 220 Family Scaffolds
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 29.55
COG0629Single-stranded DNA-binding proteinReplication, recombination and repair [L] 1.36
COG2965Primosomal replication protein NReplication, recombination and repair [L] 1.36
COG0587DNA polymerase III, alpha subunitReplication, recombination and repair [L] 0.45
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.45
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.45
COG2176DNA polymerase III, alpha subunit (gram-positive type)Replication, recombination and repair [L] 0.45


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A86.82 %
All OrganismsrootAll Organisms13.18 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000736|JGI12547J11936_1029287Not Available1240Open in IMG/M
3300000756|JGI12421J11937_10068416Not Available1074Open in IMG/M
3300001282|B570J14230_10064330Not Available1176Open in IMG/M
3300001838|RCM33_1016734Not Available742Open in IMG/M
3300001851|RCM31_10359326Not Available695Open in IMG/M
3300002383|B570J29604_1013294Not Available514Open in IMG/M
3300002835|B570J40625_100819560Not Available815Open in IMG/M
3300003490|JGI25926J51410_1008524All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2130Open in IMG/M
3300003650|SLW30_100767All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6292Open in IMG/M
3300004096|Ga0066177_10117520Not Available1033Open in IMG/M
3300004096|Ga0066177_10209588Not Available802Open in IMG/M
3300004112|Ga0065166_10269215Not Available689Open in IMG/M
3300004240|Ga0007787_10512445Not Available600Open in IMG/M
3300005517|Ga0070374_10219413Not Available976Open in IMG/M
3300005517|Ga0070374_10658902Not Available518Open in IMG/M
3300005527|Ga0068876_10045064All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2703Open in IMG/M
3300005527|Ga0068876_10271614Not Available968Open in IMG/M
3300005583|Ga0049085_10059198Not Available1365Open in IMG/M
3300005662|Ga0078894_10472266Not Available1128Open in IMG/M
3300005662|Ga0078894_11094570Not Available680Open in IMG/M
3300005805|Ga0079957_1259917All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300006484|Ga0070744_10012372All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2531Open in IMG/M
3300006917|Ga0075472_10067917Not Available1706Open in IMG/M
3300007538|Ga0099851_1297563Not Available570Open in IMG/M
3300007546|Ga0102874_1052562Not Available1313Open in IMG/M
3300007547|Ga0102875_1104197Not Available905Open in IMG/M
3300007550|Ga0102880_1210149Not Available508Open in IMG/M
3300007559|Ga0102828_1106280Not Available685Open in IMG/M
3300007561|Ga0102914_1083243Not Available1001Open in IMG/M
3300007593|Ga0102918_1176180Not Available647Open in IMG/M
3300007606|Ga0102923_1040118Not Available1471Open in IMG/M
3300007606|Ga0102923_1144773Not Available743Open in IMG/M
3300007620|Ga0102871_1067537Not Available1041Open in IMG/M
3300007624|Ga0102878_1193418Not Available583Open in IMG/M
3300007644|Ga0102902_1154590Not Available681Open in IMG/M
3300007692|Ga0102823_1191994Not Available545Open in IMG/M
3300007955|Ga0105740_1081609Not Available551Open in IMG/M
3300007962|Ga0102907_1155048All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage589Open in IMG/M
3300007973|Ga0105746_1267373Not Available590Open in IMG/M
3300007974|Ga0105747_1039742Not Available1359Open in IMG/M
3300007992|Ga0105748_10384808Not Available604Open in IMG/M
3300007992|Ga0105748_10456100Not Available556Open in IMG/M
3300008052|Ga0102893_1010187All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2921Open in IMG/M
3300008107|Ga0114340_1002788All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage10048Open in IMG/M
3300008108|Ga0114341_10171748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes2828Open in IMG/M
3300008108|Ga0114341_10352463Not Available738Open in IMG/M
3300008108|Ga0114341_10362321Not Available722Open in IMG/M
3300008110|Ga0114343_1090713Not Available1078Open in IMG/M
3300008110|Ga0114343_1107639All Organisms → cellular organisms → Bacteria2210Open in IMG/M
3300008110|Ga0114343_1111255Not Available931Open in IMG/M
3300008113|Ga0114346_1021682All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4421Open in IMG/M
3300008113|Ga0114346_1147902All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2625Open in IMG/M
3300008113|Ga0114346_1250006All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage660Open in IMG/M
3300008117|Ga0114351_1109228Not Available1597Open in IMG/M
3300008117|Ga0114351_1463906Not Available507Open in IMG/M
3300008119|Ga0114354_1009745All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4477Open in IMG/M
3300008119|Ga0114354_1246774Not Available576Open in IMG/M
3300008120|Ga0114355_1041049All Organisms → cellular organisms → Bacteria3434Open in IMG/M
3300008120|Ga0114355_1121629Not Available981Open in IMG/M
3300008120|Ga0114355_1239274Not Available543Open in IMG/M
3300008258|Ga0114840_1018399Not Available1173Open in IMG/M
3300008264|Ga0114353_1216716Not Available886Open in IMG/M
3300008266|Ga0114363_1057876Not Available1518Open in IMG/M
3300008953|Ga0104241_1002497Not Available1376Open in IMG/M
3300008962|Ga0104242_1017276Not Available1256Open in IMG/M
3300008962|Ga0104242_1019189Not Available1186Open in IMG/M
3300008964|Ga0102889_1184367Not Available608Open in IMG/M
3300008999|Ga0102816_1291080Not Available519Open in IMG/M
3300009026|Ga0102829_1031326Not Available1552Open in IMG/M
3300009026|Ga0102829_1101347Not Available899Open in IMG/M
3300009026|Ga0102829_1340735Not Available504Open in IMG/M
3300009049|Ga0102911_1151880Not Available657Open in IMG/M
3300009059|Ga0102830_1065618Not Available1089Open in IMG/M
3300009155|Ga0114968_10190223Not Available1195Open in IMG/M
3300009159|Ga0114978_10514225Not Available701Open in IMG/M
3300009159|Ga0114978_10549362Not Available673Open in IMG/M
3300009161|Ga0114966_10592017Not Available620Open in IMG/M
3300009163|Ga0114970_10701002Not Available538Open in IMG/M
3300009180|Ga0114979_10634634Not Available608Open in IMG/M
3300009181|Ga0114969_10492278Not Available687Open in IMG/M
3300009184|Ga0114976_10280259Not Available897Open in IMG/M
3300009419|Ga0114982_1202391Not Available615Open in IMG/M
3300010354|Ga0129333_10087558Not Available2882Open in IMG/M
3300010354|Ga0129333_10159241Not Available2069Open in IMG/M
3300010354|Ga0129333_10919319Not Available739Open in IMG/M
3300010354|Ga0129333_10921566Not Available738Open in IMG/M
3300010354|Ga0129333_11221193Not Available624Open in IMG/M
3300010370|Ga0129336_10330231Not Available843Open in IMG/M
3300010374|Ga0114986_1036633Not Available902Open in IMG/M
3300010885|Ga0133913_11010027Not Available2150Open in IMG/M
3300011010|Ga0139557_1051176Not Available702Open in IMG/M
3300011011|Ga0139556_1009617Not Available1396Open in IMG/M
3300011268|Ga0151620_1026188Not Available2007Open in IMG/M
3300011381|Ga0102688_1658527Not Available549Open in IMG/M
3300012666|Ga0157498_1050016Not Available640Open in IMG/M
3300012667|Ga0157208_10036615Not Available661Open in IMG/M
3300012706|Ga0157627_1207716Not Available517Open in IMG/M
3300012722|Ga0157630_1194561Not Available1051Open in IMG/M
3300012779|Ga0138284_1180680Not Available561Open in IMG/M
3300013005|Ga0164292_10232301Not Available1294Open in IMG/M
3300013005|Ga0164292_10567538Not Available736Open in IMG/M
3300013087|Ga0163212_1144549All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage753Open in IMG/M
(restricted) 3300013132|Ga0172372_10383172Not Available967Open in IMG/M
(restricted) 3300013132|Ga0172372_10767208Not Available602Open in IMG/M
(restricted) 3300013137|Ga0172375_10956427Not Available513Open in IMG/M
3300013295|Ga0170791_14364415Not Available586Open in IMG/M
3300013295|Ga0170791_14844064Not Available580Open in IMG/M
3300013372|Ga0177922_11275556Not Available680Open in IMG/M
3300014050|Ga0119952_1017798All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2471Open in IMG/M
3300014050|Ga0119952_1095706Not Available703Open in IMG/M
(restricted) 3300014720|Ga0172376_10449637Not Available730Open in IMG/M
(restricted) 3300014720|Ga0172376_10657485Not Available570Open in IMG/M
3300017766|Ga0181343_1062174Not Available1085Open in IMG/M
3300017778|Ga0181349_1066201Not Available1392Open in IMG/M
3300020141|Ga0211732_1072365Not Available927Open in IMG/M
3300020151|Ga0211736_10966645All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage751Open in IMG/M
3300020159|Ga0211734_10521997Not Available571Open in IMG/M
3300020172|Ga0211729_10038469Not Available513Open in IMG/M
3300020204|Ga0194116_10280004Not Available890Open in IMG/M
3300020205|Ga0211731_10454974All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2839Open in IMG/M
3300020514|Ga0208202_1026498Not Available658Open in IMG/M
3300020514|Ga0208202_1030572Not Available605Open in IMG/M
3300020544|Ga0207937_1057829Not Available515Open in IMG/M
3300021519|Ga0194048_10301002Not Available577Open in IMG/M
3300021961|Ga0222714_10294126Not Available893Open in IMG/M
3300021961|Ga0222714_10630603Not Available531Open in IMG/M
3300021961|Ga0222714_10648917Not Available521Open in IMG/M
3300021962|Ga0222713_10123218All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1825Open in IMG/M
3300021963|Ga0222712_10582087Not Available649Open in IMG/M
3300023174|Ga0214921_10108905Not Available2042Open in IMG/M
3300023179|Ga0214923_10289198Not Available898Open in IMG/M
3300024343|Ga0244777_10638336Not Available642Open in IMG/M
3300024346|Ga0244775_10307003Not Available1315Open in IMG/M
3300024346|Ga0244775_10495351Not Available999Open in IMG/M
3300024346|Ga0244775_11196365Not Available592Open in IMG/M
3300024348|Ga0244776_10543856Not Available742Open in IMG/M
3300024350|Ga0255167_1014193Not Available1595Open in IMG/M
3300024351|Ga0255141_1050086Not Available614Open in IMG/M
3300024352|Ga0255142_1040234Not Available728Open in IMG/M
3300024355|Ga0255157_1034508Not Available851Open in IMG/M
3300024357|Ga0255165_1082283Not Available510Open in IMG/M
3300024500|Ga0255143_1029097Not Available918Open in IMG/M
3300024500|Ga0255143_1063637Not Available597Open in IMG/M
3300024537|Ga0255225_1011423Not Available1374Open in IMG/M
3300024561|Ga0255288_1116181Not Available596Open in IMG/M
3300024572|Ga0255268_1186086Not Available514Open in IMG/M
3300024573|Ga0256337_1088322Not Available778Open in IMG/M
3300024865|Ga0256340_1151500Not Available556Open in IMG/M
3300025585|Ga0208546_1110805Not Available609Open in IMG/M
3300026455|Ga0255155_1073209Not Available562Open in IMG/M
3300026478|Ga0255156_1002121All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4360Open in IMG/M
3300026571|Ga0255289_1054696Not Available907Open in IMG/M
3300026573|Ga0255269_1100329Not Available788Open in IMG/M
3300027135|Ga0255073_1016098Not Available1356Open in IMG/M
3300027138|Ga0255064_1065974Not Available564Open in IMG/M
3300027153|Ga0255083_1007885All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2434Open in IMG/M
3300027251|Ga0208809_1068960Not Available573Open in IMG/M
3300027260|Ga0208027_1006839Not Available2365Open in IMG/M
3300027304|Ga0208810_1043955Not Available997Open in IMG/M
3300027320|Ga0208923_1047249Not Available767Open in IMG/M
3300027320|Ga0208923_1068500Not Available629Open in IMG/M
3300027337|Ga0255087_1088959Not Available549Open in IMG/M
3300027339|Ga0255210_1026043Not Available1275Open in IMG/M
3300027367|Ga0208801_1049468Not Available638Open in IMG/M
3300027396|Ga0255146_1117460Not Available543Open in IMG/M
3300027467|Ga0255154_1080422Not Available713Open in IMG/M
3300027468|Ga0209247_1009023Not Available1306Open in IMG/M
3300027486|Ga0255086_1008825Not Available2114Open in IMG/M
3300027503|Ga0255182_1089557Not Available729Open in IMG/M
3300027503|Ga0255182_1117155Not Available605Open in IMG/M
3300027541|Ga0255158_1098887Not Available637Open in IMG/M
3300027563|Ga0209552_1195043Not Available506Open in IMG/M
3300027571|Ga0208897_1183182Not Available509Open in IMG/M
3300027631|Ga0208133_1063844Not Available878Open in IMG/M
3300027644|Ga0209356_1193668Not Available550Open in IMG/M
3300027734|Ga0209087_1231717Not Available691Open in IMG/M
3300027754|Ga0209596_1084978Not Available1532Open in IMG/M
3300027754|Ga0209596_1253638Not Available720Open in IMG/M
3300027759|Ga0209296_1341046Not Available580Open in IMG/M
3300027772|Ga0209768_10439698Not Available508Open in IMG/M
3300027785|Ga0209246_10138608Not Available956Open in IMG/M
3300027785|Ga0209246_10261026Not Available670Open in IMG/M
3300027793|Ga0209972_10289979Not Available725Open in IMG/M
3300027805|Ga0209229_10188111Not Available926Open in IMG/M
3300027816|Ga0209990_10008561All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6517Open in IMG/M
3300027816|Ga0209990_10094285Not Available1459Open in IMG/M
3300027892|Ga0209550_10230764Not Available1238Open in IMG/M
3300027892|Ga0209550_10322642Not Available984Open in IMG/M
3300027892|Ga0209550_10606094Not Available642Open in IMG/M
3300027969|Ga0209191_1344841Not Available539Open in IMG/M
3300028103|Ga0255172_1082204Not Available577Open in IMG/M
3300028286|Ga0256331_1027680Not Available1270Open in IMG/M
3300028286|Ga0256331_1127797Not Available574Open in IMG/M
3300031784|Ga0315899_10104399All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2915Open in IMG/M
3300031784|Ga0315899_10388552Not Available1360Open in IMG/M
3300031787|Ga0315900_10223636Not Available1638Open in IMG/M
3300031857|Ga0315909_10330272Not Available1124Open in IMG/M
3300031857|Ga0315909_10719721Not Available644Open in IMG/M
3300031857|Ga0315909_10726615Not Available640Open in IMG/M
3300031857|Ga0315909_10760758Not Available619Open in IMG/M
3300031951|Ga0315904_10331794Not Available1409Open in IMG/M
3300031963|Ga0315901_10016459All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage7996Open in IMG/M
3300031963|Ga0315901_11073314Not Available556Open in IMG/M
3300032050|Ga0315906_10131676All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2445Open in IMG/M
3300032050|Ga0315906_10963759Not Available646Open in IMG/M
3300032093|Ga0315902_11084259Not Available590Open in IMG/M
3300032116|Ga0315903_10703773Not Available755Open in IMG/M
3300032116|Ga0315903_10935621Not Available615Open in IMG/M
3300034021|Ga0335004_0010762All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes6724Open in IMG/M
3300034022|Ga0335005_0535384Not Available646Open in IMG/M
3300034022|Ga0335005_0663225Not Available556Open in IMG/M
3300034022|Ga0335005_0694549Not Available538Open in IMG/M
3300034063|Ga0335000_0206997Not Available1260Open in IMG/M
3300034066|Ga0335019_0001461All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage15324Open in IMG/M
3300034082|Ga0335020_0261513Not Available854Open in IMG/M
3300034093|Ga0335012_0295571Not Available823Open in IMG/M
3300034102|Ga0335029_0560250Not Available650Open in IMG/M
3300034109|Ga0335051_0010130All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5216Open in IMG/M
3300034166|Ga0335016_0323841Not Available932Open in IMG/M
3300034279|Ga0335052_0437448Not Available688Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater13.64%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine13.18%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake11.82%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater10.91%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton9.09%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake6.82%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater6.82%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater6.36%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.73%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine2.73%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water2.27%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.27%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater1.82%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.36%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.91%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton0.91%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface0.91%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment0.45%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic0.45%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.45%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment0.45%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.45%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.45%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.45%
Freshwater, Surface IceEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice0.45%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.45%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.45%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater0.45%
Subglacial FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Subglacial Freshwater0.45%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000736Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011EnvironmentalOpen in IMG/M
3300000756Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011EnvironmentalOpen in IMG/M
3300001282Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnionEnvironmentalOpen in IMG/M
3300001838Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM33, ROCA_DNA217_0.2um_bLM_C_2aEnvironmentalOpen in IMG/M
3300001851Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM31, ROCA_DNA206_0.2um_MCP-S_C_3bEnvironmentalOpen in IMG/M
3300002383Freshwater microbial communities from Lake Mendota, WI - 15JUN2012 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003490Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SNEnvironmentalOpen in IMG/M
3300003650Subglacial freshwater microbial communities from Lake Whillans, Antarctica - 3.0 micron filterEnvironmentalOpen in IMG/M
3300004096Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)EnvironmentalOpen in IMG/M
3300004112Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)EnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300005517Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)EnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005583Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006917Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007546Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02EnvironmentalOpen in IMG/M
3300007547Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02EnvironmentalOpen in IMG/M
3300007550Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3EnvironmentalOpen in IMG/M
3300007559Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541EnvironmentalOpen in IMG/M
3300007561Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3EnvironmentalOpen in IMG/M
3300007593Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3EnvironmentalOpen in IMG/M
3300007606Estuarine microbial communities from the Columbia River estuary - metaG 1569-02EnvironmentalOpen in IMG/M
3300007620Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02EnvironmentalOpen in IMG/M
3300007624Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02EnvironmentalOpen in IMG/M
3300007644Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02EnvironmentalOpen in IMG/M
3300007692Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743EnvironmentalOpen in IMG/M
3300007955Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_3.0umEnvironmentalOpen in IMG/M
3300007962Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02EnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300007974Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2umEnvironmentalOpen in IMG/M
3300007992Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2umEnvironmentalOpen in IMG/M
3300008052Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02EnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008119Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008258Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NAEnvironmentalOpen in IMG/M
3300008264Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-53-LTREnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008953Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT4EnvironmentalOpen in IMG/M
3300008962Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5EnvironmentalOpen in IMG/M
3300008964Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02EnvironmentalOpen in IMG/M
3300008999Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545EnvironmentalOpen in IMG/M
3300009026Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575EnvironmentalOpen in IMG/M
3300009049Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02EnvironmentalOpen in IMG/M
3300009059Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703EnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009184Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaGEnvironmentalOpen in IMG/M
3300009419Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FTEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300010374Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S-1-Day17EnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011010Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface IceEnvironmentalOpen in IMG/M
3300011011Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300011268Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555EnvironmentalOpen in IMG/M
3300011381Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel7S_1600h metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300012666Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2EnvironmentalOpen in IMG/M
3300012667Freshwater microbial communities from Maskinonge River, Ontario, Canada - S15EnvironmentalOpen in IMG/M
3300012706Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES159 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012722Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES163 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012779Freshwater microbial communities from Lake Simoncouche, Canada - S_130206_E_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013087Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30LEnvironmentalOpen in IMG/M
3300013132 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5mEnvironmentalOpen in IMG/M
3300013137 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1mEnvironmentalOpen in IMG/M
3300013295northern Canada Lakes metatranscriptome co-assemblyEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300014050Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007BEnvironmentalOpen in IMG/M
3300014720 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35mEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300020141Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1EnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020204Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surfaceEnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300020514Freshwater microbial communities from Lake Mendota, WI - 27AUG2008 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020544Freshwater microbial communities from Lake Mendota, WI - 04SEP2011 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021519Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5mEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300024350Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8dEnvironmentalOpen in IMG/M
3300024351Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_0hEnvironmentalOpen in IMG/M
3300024352Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_0hEnvironmentalOpen in IMG/M
3300024355Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepB_8hEnvironmentalOpen in IMG/M
3300024357Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8dEnvironmentalOpen in IMG/M
3300024500Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0hEnvironmentalOpen in IMG/M
3300024537Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024561Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024572Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024573Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024865Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepC_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025585Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300026455Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8hEnvironmentalOpen in IMG/M
3300026478Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8hEnvironmentalOpen in IMG/M
3300026571Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026573Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027135Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepB_8hEnvironmentalOpen in IMG/M
3300027138Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_0hEnvironmentalOpen in IMG/M
3300027153Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepC_8hEnvironmentalOpen in IMG/M
3300027251Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027260Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027304Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027320Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)EnvironmentalOpen in IMG/M
3300027337Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepA_8dEnvironmentalOpen in IMG/M
3300027339Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepA_8dEnvironmentalOpen in IMG/M
3300027367Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027396Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_8hEnvironmentalOpen in IMG/M
3300027467Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepB_8hEnvironmentalOpen in IMG/M
3300027468Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027486Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_8dEnvironmentalOpen in IMG/M
3300027503Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8dEnvironmentalOpen in IMG/M
3300027541Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepC_8hEnvironmentalOpen in IMG/M
3300027563Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027571Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)EnvironmentalOpen in IMG/M
3300027631Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)EnvironmentalOpen in IMG/M
3300027644Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027772Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027785Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027793Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300027816Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027892Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027969Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300028103Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8dEnvironmentalOpen in IMG/M
3300028286Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300034021Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057EnvironmentalOpen in IMG/M
3300034022Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058EnvironmentalOpen in IMG/M
3300034063Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034082Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088EnvironmentalOpen in IMG/M
3300034093Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072EnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034109Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158EnvironmentalOpen in IMG/M
3300034166Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079EnvironmentalOpen in IMG/M
3300034279Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI12547J11936_102928713300000736Freshwater And SedimentQKELTRVIAFPTMYKMSLAKMREGMKCNVVLSTLDDGTLMVKEIK*
JGI12421J11937_1006841613300000756Freshwater And SedimentNAQKELTRVIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
B570J14230_1006433013300001282FreshwaterVLSNADKQLTRVIVFPTLYKISLAKMREGMKCKLVLSKLDDGTLNVKEIK*
RCM33_101673433300001838Marine PlanktonVLSDKDKNLTRCIVFSTMYKFALAKMREGMKCQVLLSKLDDGTLMVKEIK*
RCM31_1035932633300001851Marine PlanktonDKELKRVIVFPAKYSMALAKMRPGMKCNVELSTLDDGTLMVKEFK*
B570J29604_101329413300002383FreshwaterAIVFSSLYKIALAKMREGMKCQVILSKLDDGTLMIKEIK*
B570J40625_10081956033300002835FreshwaterGKTMAHIVMSNKNKELTRVIVFSTMYHKALAKMREGMKCNVVLSKLDDGTLMVKEVK*
JGI25926J51410_100852463300003490Freshwater LakeHLVMSDKDKNLNRAIVFSSMYPLSLAKMREGMICEPVLKTLEDGTLMVKEVK*
SLW30_100767173300003650Subglacial FreshwaterVLTDKDKNLTRAIAFPTMYKMALAKMRESMKCRVVLSTLDDGTLMIKEIK*
Ga0066177_1011752013300004096Freshwater LakeLTRAIAFPAMYKMTLAKMREGMKCKVVLGKLDDGTLNIKEIL*
Ga0066177_1020958813300004096Freshwater LakeHIVMSDKDKNLTRAIVFSSMYKIALAKMREGMVCQVVLSKLDDGTLMVKEIK*
Ga0065166_1026921533300004112Freshwater LakeEKELTRVIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
Ga0007787_1051244533300004240Freshwater LakeNLTRAIAFPTMYKISLAKMREGMKCQVILSKLDDGTLNIKEIK*
Ga0070374_1021941313300005517Freshwater LakeIVLSDKDKNLTRAIVFPSMYKISLAKMREGMKCQVVLSTLDDGTLMIKEIK*
Ga0070374_1065890213300005517Freshwater LakeDKELTRAIVFSTMYKIALAKLREGMVCDVVLSKLDDGTLMVKEIK*
Ga0068876_1004506413300005527Freshwater LakeSSMYKIALAKMREGMKCQVVLSKLDDGTLMIKEIK*
Ga0068876_1027161413300005527Freshwater LakeKTMAHIVMSDKDKNLTRAIVFSSMYKIALAKMREGMKCQVVLSKLDDGTLMIKEIK*
Ga0049085_1005919813300005583Freshwater LenticHIVFTNKNKELTRAIAFPTMYKMALAKLREGMKCKITLSKLDDGTLMVKEIK*
Ga0078894_1047226653300005662Freshwater LakeIVFTNKDKELTRAIVFSTMYKIALAKLREGMVCDVVLSKLDDGTLMVKEIK*
Ga0078894_1109457013300005662Freshwater LakeSDRDKNLTRAIVFSSMYKIALAKMREGMKCQVILSKLDDGTLMIKEIK*
Ga0079957_125991713300005805LakeKTMAHIVLSDKNKNLTRCIVFSTMYKIALAKMREGMKCKIVLSKLDDGTLMVKEIK*
Ga0070744_1001237293300006484EstuarineHIVLSDKDKNLTRAIVFPSMYKISLAKMREGMKCQVVLSTLDDGTLMIKEIK*
Ga0075472_1006791743300006917AqueousLTRAIVFSSMYKIALAKMREGMKCQVILSKLDDGTLMIKEIK*
Ga0099851_129756313300007538AqueousKTMSHIVMSDKNKKLTRAIAFPSMYKITLAKMRDGMKCKVVLSKLDDGTLMIKEIK*
Ga0102874_105256213300007546EstuarineFPTMYKMSLAKMREGMKCKVVLSTLDDGTFMVKEIK*
Ga0102875_110419713300007547EstuarineTRVIAFPTMYKMSLAKMREGMKCRVVLSTLDDGTLMVKEIK*
Ga0102880_121014913300007550EstuarineKQMSHIVLSDKNKVLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIK*
Ga0102828_110628013300007559EstuarineSSMYPLSLAKMRAGMVCEPVLKSLEDGTLMVKEVK*
Ga0102914_108324313300007561EstuarineLTRVIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
Ga0102918_117618013300007593EstuarineKELTRVIAFPTMYKMSLAKMREGMKCKLVLSKLDDGTLNVKEIL*
Ga0102923_104011843300007606EstuarineANSEKELTRVIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
Ga0102923_114477313300007606EstuarineKAGKTMSHIVLSNAQKELTRAIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
Ga0102871_106753743300007620EstuarineFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
Ga0102878_119341833300007624EstuarineELTRVIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
Ga0102902_115459043300007644EstuarineSTMYKIALAKLREGMACDVVLSKLDDGTLMVKEIK*
Ga0102823_119199433300007692EstuarineIVFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
Ga0105740_108160913300007955Estuary WaterVLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIK*
Ga0102907_115504833300007962EstuarineSDKDKNLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIA*
Ga0105746_126737323300007973Estuary WaterMSDKDKNLNRAIVFSSMYPLSLAKMREGMICEPVLKTLEDGTLMVKEVK*
Ga0105747_103974243300007974Estuary WaterSQKELTRVIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
Ga0105748_1038480813300007992Estuary WaterPTMYKMSLAKMREGMKCNVVLSTLDDGTLMVKEIK*
Ga0105748_1045610013300007992Estuary WaterAIVFPTMYKMSLAKMREGMKCKVVLSKLDDGTLNIKEIL*
Ga0102893_101018713300008052EstuarineKELTRVIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
Ga0114340_1002788233300008107Freshwater, PlanktonAHLVFSDKDKNLTRAIAFPTLYKMALAKMREGMKCKVNLSKLDDGTLMIKEIK*
Ga0114341_1017174843300008108Freshwater, PlanktonMSDKDKVLTRAIVFSSLYKIALAKMREGMKCQVILSKLDDGTLMVKEIK*
Ga0114341_1035246313300008108Freshwater, PlanktonSDKDKNLTRAIVFSSLYKIALAKMREGMKCQVIISKLDDGTLNIKEIK*
Ga0114341_1036232113300008108Freshwater, PlanktonSMYKIALAKMREGMTCQVVLSKLDDGTLMIKEIK*
Ga0114343_109071343300008110Freshwater, PlanktonKVLTRAIVFSSLYKIALAKMREGMKCQVILSKLDDGTLMVKEIK*
Ga0114343_110763933300008110Freshwater, PlanktonMTDKDKNLTRAIAFPTMYKFALAKMREGMKCKVKLSELDDGTLNIKEIA*
Ga0114343_111125513300008110Freshwater, PlanktonIAFPTMYKMALAKMREGMKCKMVLSKLDDGTLMIKEIK*
Ga0114346_102168223300008113Freshwater, PlanktonMSHIVLSNADKELTRVIVFPTMYKMSLAKMREGMKCKLVLSKLDDGTLNVKEIL*
Ga0114346_1147902103300008113Freshwater, PlanktonKTMAHIVLSDRDKNLTRAIVFSSMYKIALAKMREGMKCQVILSKLDDGTLMIKEIK*
Ga0114346_125000633300008113Freshwater, PlanktonVLSDRDKKLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIK*
Ga0114351_110922813300008117Freshwater, PlanktonGKTMAHIVMSDKDKVLTRAIVFSSLYKIALAKMREGMKCQVILSKLDDGTLMVKEIK*
Ga0114351_146390613300008117Freshwater, PlanktonFSNKEKELTRAIAFPTMYKIALAKLRDGMKCKVVLSKLDDGTLMIKEIK*
Ga0114354_1009745133300008119Freshwater, PlanktonKAGKTMAHIVLSDRDKNLTRAIVFSSMYKIALAKMREGMKCQVILSKLDDGTLMIKEIK*
Ga0114354_124677413300008119Freshwater, PlanktonKNLTRAIAFSSIYPIALAKMREGMICKPVLKKLDDGTLMIKEIK*
Ga0114355_104104943300008120Freshwater, PlanktonMAHIVMSDKDKVLTRAIVFSSLYKIALAKMREGMKCQVILSKLDDGTLMVKEIK*
Ga0114355_112162913300008120Freshwater, PlanktonMMAHLVFTNKNKELTRAIAFPTMYKMALAKLREGMKCKITLSKLDDGTLMIKEIK*
Ga0114355_123927433300008120Freshwater, PlanktonSSIYPIALAKMREGMICKPVLKKLDDGTLMIKEIK*
Ga0114840_101839913300008258Freshwater, PlanktonDKNLTRAIVFSSMYKIALAKMREGMKCQVVLSKLDDGTLMIKEIK*
Ga0114353_121671643300008264Freshwater, PlanktonGKTMAHIVMSDKDKNLTRAIVFSSMYKIALAKMREGMKCQVVLSKLDDGTLMIKEIK*
Ga0114363_105787613300008266Freshwater, PlanktonKDKNLTRCIVFSTMYKIGLAKMREGLRCKVVLSKLDDGTLMVKEIK*
Ga0104241_100249713300008953FreshwaterNKLTRAIAFPAMYKMTLAKMREGMKCRVALSKLDDGTLNIKEIK*
Ga0104242_101727643300008962FreshwaterKAGKTMSHIVLSNRDKELTRVIVFPTMYKFSLAKMREGMKCKPVLSKLDDGTLMVKEIK*
Ga0104242_101918913300008962FreshwaterPTMYKMSLAKMREGMKCKPVLSKLDDGTLMVKEIK*
Ga0102889_118436713300008964EstuarineTMYKMSLAKMREGMKCRVVLSTLDDGTLMVKEIK*
Ga0102816_129108013300008999EstuarineRAIAFPTMYKMALAKLREGMKCNITLSKLDDGTLMVKEIK*
Ga0102829_103132613300009026EstuarineLSDRDKKLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIK*
Ga0102829_110134713300009026EstuarineHIVLSNAQKELTRAIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
Ga0102829_134073513300009026EstuarineTMYKMSLAKMREGMKCNVVLSTLDDGTLMVKEIK*
Ga0102911_115188033300009049EstuarineFPTMYKMSLAKMREGMKCKLVLSKLDDGTLNVKEIL*
Ga0102830_106561843300009059EstuarineRVIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
Ga0114968_1019022313300009155Freshwater LakeHIVLSNRNKELTRAIAFPTMYKMTLAKMREGMKCKVVLSKLDDGTMNVKEIK*
Ga0114978_1051422513300009159Freshwater LakeTRVIAFPTMYKMSLAKMREGMKCNVVLSTLDDGTLMVKEIK*
Ga0114978_1054936213300009159Freshwater LakeHIVFANKDKELVRAIAFPTMYKMTLAKLREGMKCKVVLSKLDDGTLNIKEII*
Ga0114966_1059201713300009161Freshwater LakeLVMSDKDKNLNRAIVFSSMYPLSLAKMREGMICEPVLKTLEDGTLMVKEVK*
Ga0114970_1070100233300009163Freshwater LakeVFPTLYKMSLAKMREGMKCKVVLAKLDDGTLNVKEIK*
Ga0114979_1063463413300009180Freshwater LakeNRDKQLTRAIAFPAMYKMTLAKMREGMKCKVTLSKLDDGTLSIKEIK*
Ga0114969_1049227813300009181Freshwater LakeIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIK*
Ga0114976_1028025913300009184Freshwater LakeMMSHLILTNKNKELTRAIAFPTMYKMSLAKMREGMKCKVTLSTLDDGTMMVKEIK*
Ga0114982_120239113300009419Deep SubsurfacePTLYKMALAKMREGMKCKVTLSKLDDGTLMIKEIK*
Ga0129333_1008755813300010354Freshwater To Marine Saline GradientMSDKDKNLTRAIAFSSIYPIALAKMREGMICRPVLKKLDDGTLMIKEIK*
Ga0129333_1015924113300010354Freshwater To Marine Saline GradientKNLTRAIVFSSMYKIALAKMREGMKCQAILSKLDDGTLMIKEIK*
Ga0129333_1091931913300010354Freshwater To Marine Saline GradientDKNLTRAIAFSSIYPIALAKMREGMICRPILKKLDDGTLMIKEIK*
Ga0129333_1092156613300010354Freshwater To Marine Saline GradientIVMSDKDKKLTRAIAFPAMYKITLAKMRDGMKCKPVLSKLDDGTLMIKEIK*
Ga0129333_1122119313300010354Freshwater To Marine Saline GradientHIVMSDKNKKLTRAIAFPSMYKITLAKMRDGMKCKVVLSKLDDGTLMIKEIK*
Ga0129336_1033023113300010370Freshwater To Marine Saline GradientAIVFSSLYKIALAKMREGMKCQVILSKLDDGTLMVKEIK*
Ga0114986_103663313300010374Deep SubsurfaceIVMTNKNKELTRVIVFSTMYHKALAKMREGMKCNVVLSKLDDGTLMVKEVK*
Ga0133913_1101002753300010885Freshwater LakePTMYKMTLAKMREGMKCKVVLSKLDDGTMNVKEIK*
Ga0139557_105117633300011010FreshwaterTMYGKAVGKMREGMTCKIVLSKLDDGTLMVKEIR*
Ga0139556_100961743300011011FreshwaterFPTMYKMTLAKMREGMKCRVVLSKLDDGTMNVKEIK*
Ga0151620_102618863300011268FreshwaterLIMSDSEKNLTRAIVFSSMYPISLAKMREGMICEPILKSLEDGTIMVKEIK*
Ga0102688_165852733300011381Freshwater LakeKNLTRAIVFSSMYKIALAKMREGMKCQVVLSKLDDGTLMIKEIK*
Ga0157498_105001633300012666Freshwater, Surface IceTMAHIVLSDKDKNLTRVIVFPAMYKVALAKMRDGMKCKVVLSKLDDGTLNVKEIK*
Ga0157208_1003661533300012667FreshwaterAIVFSSMYPISLAKMREGMTCEPILKSLEDGTIMVKEIK*
Ga0157627_120771633300012706FreshwaterIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
Ga0157630_119456143300012722FreshwaterAIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK*
Ga0138284_118068013300012779Freshwater LakeTDRDKNLTRAIAFPTMYKMTLAKMREGMKCRVTLSKLDDGTLNIKEIK*
Ga0164292_1023230143300013005FreshwaterELTRVIVFSTMYHKALAKMREGMKCNVVLSKLDDGTLMVKEVK*
Ga0164292_1056753813300013005FreshwaterELTRVIVFSTMYHKALAKMREGMKCNVVLSKLDDGTLMVKEIK*
Ga0163212_114454913300013087FreshwaterTKAGKTMSHIILSNKDKDLTRAIAFPSMYKMSLAKMREGMNCKAVLSKLDDGTLMIKEIK
(restricted) Ga0172372_1038317213300013132FreshwaterSMYKITLAKMRDGMKCKPVLSKLDDGTLMIKEIK*
(restricted) Ga0172372_1076720813300013132FreshwaterAFPTMYKMSLAKMREGMKCQVILKELDDGTLNVKEIK*
(restricted) Ga0172375_1095642713300013137FreshwaterKDKNLTRAIAFSSMYPIALAKMREGMICKPILKKLDDGTLMIKEIK*
Ga0170791_1436441533300013295FreshwaterKHMSHIVMTDRDKNLTRAIAFPTMYKMTLAKMREGMKCRVTLSKLDDGTLNIKEIK*
Ga0170791_1484406413300013295FreshwaterTMAHLVMSDKDKNLNRAIVFSSMYPLSLAKMREGMICEPILKTLEDGTLMVKEVK*
Ga0177922_1127555613300013372FreshwaterHIVLSDKDKNLTRAIVFSSLYKIALAKMREGMKCQVIISKLDDGTLNIKEIK*
Ga0119952_101779883300014050FreshwaterMAHIVLSDKDKNLTRAIVFSSLYKIALAKMREGMKCQVIISKLDDGTLNIKEIK*
Ga0119952_109570643300014050FreshwaterRAIVFSTMYKIALAKMREGMICNVTLSKLDDGTLMVKEIK*
(restricted) Ga0172376_1044963713300014720FreshwaterLTRAIAFPTMYKMSLAKMREGMKCQVILKELDDGTLNIKEIK*
(restricted) Ga0172376_1065748533300014720FreshwaterDKNLTRAIAFPSMYKITLAKMRDGMKCKPVLSKLDDGTLMIKEIK*
Ga0181343_106217443300017766Freshwater LakeKRKLSDRDKNLTRAIVFSSMYKIALAKMREGMKCQVILSKLDDGTLMIKEIK
Ga0181349_106620133300017778Freshwater LakeLTRAIVFPSMYKISLAKMREGMKCQVILSTLDDGTLMIKEIK
Ga0211732_107236533300020141FreshwaterAGKVMSHIVLSDKDKNLTRAIVFPSMYKISLAKMREGMKCQVTLSTLDDGTLMIKEIK
Ga0211736_1096664533300020151FreshwaterVLSDKDKNLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIK
Ga0211734_1052199733300020159FreshwaterKVLTRAIVFPTMYGKAVGKMREGMTCKMVLSKLDDGTLMVKEIK
Ga0211729_1003846933300020172FreshwaterFSSMYKIALAKMREGMKCQVVLSKLDDGTLMIKEIK
Ga0194116_1028000443300020204Freshwater LakeVIVFPSLYKIALAKMREGMKCQVIISKLDDGTLNVKEIK
Ga0211731_1045497413300020205FreshwaterIVMSDKDKNLTRAIVFSSMYKIALAKMREGMKCQIVLSKLDDGTLMIKEIK
Ga0208202_102649833300020514FreshwaterIVFSSLYKIALAKMREGMKCQVILSKLDDGTLMIKEIK
Ga0208202_103057213300020514FreshwaterSDKDKNLTRAIVFSSLYKIALAKMREGMKCQVIISKLDDGTLNIKEIK
Ga0207937_105782933300020544FreshwaterKNKQLTRAIAFPAMYAKVLARMREGMKSKPVLSKLEDGTLMIKEIK
Ga0194048_1030100233300021519Anoxic Zone FreshwaterDKNLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIK
Ga0222714_1029412643300021961Estuarine WaterSDKDKNLTRAIAFPAMYKMTLAKMREGMKCRVTLSKLDDGTLNIKEIK
Ga0222714_1063060313300021961Estuarine WaterDKDKNLVRAIAFPTMYKITLAKMRDGMVCNPVLSTLDDGTFMIKEIK
Ga0222714_1064891733300021961Estuarine WaterNKELTRAIVFPTMYKMSLAKMREGMKCKLVLSKLDDGTLNVKEIK
Ga0222713_1012321813300021962Estuarine WaterLSDKDKNLTRAIAFPAMYKMTLAKMREGMKCKVTLSKLDDGTLNIKEIK
Ga0222712_1058208713300021963Estuarine WaterLTRAIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK
Ga0214921_1010890553300023174FreshwaterAGKQMSHLILSNRNKELTRAIAFPAMYKMTLAKMREGMKCKVTLSKLDDGTLSIKEIK
Ga0214923_1028919813300023179FreshwaterNRDKELTRVIVFPTMYKFSLAKMREGMKCKPVLSTLDDGTLMVKEIK
Ga0244777_1063833633300024343EstuarineHIVLSDRDKKLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIK
Ga0244775_1030700343300024346EstuarineMSHIVLADKNKELTRVIVFPTMYKISLAKMREGMVCKLTLSKLDDGTLMVKEIK
Ga0244775_1049535113300024346EstuarineKTKAGKMMSHIVLSNAQKELTRAIVFPTLYKMSLAKMREGMKCKVVLAKLDDGTLNVKEI
Ga0244775_1119636513300024346EstuarineTKAGKTMAHIVMSDKDKNLTRAIVFSSMYKIALAKMREGMKCQVVLSKLDDGTLMVKEIK
Ga0244776_1054385633300024348EstuarineSNAQKELTRAIAFPTVYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK
Ga0255167_101419343300024350FreshwaterAIAFPAMYKITLAKMRDGMKCKPVLSKLDDGTLMIKEIK
Ga0255141_105008633300024351FreshwaterKGLVRAIVFSTMYKIALAKMREGMICNVILSKLDDGTLMVKEIK
Ga0255142_104023433300024352FreshwaterIVFSTMYKIALAKMREGMKCKVTLSKLDDGTLMVKEIK
Ga0255157_103450843300024355FreshwaterNLTRAIAFPSMYKITLAKMRDGMKCKPVLSKLDDGTLMIKEIK
Ga0255165_108228323300024357FreshwaterVTKAGKTMSHIILSNKDKDLTRAIAFPSMYKMSLAKMREGMNCRAVLSKLDDGTLMIKEI
Ga0255143_102909713300024500FreshwaterTRAIAFPSMYKITLAKMRDGMKCKPVLSKLDDGTLMIKEIK
Ga0255143_106363733300024500FreshwaterHIVMTDKDKNLTRAIAFPTMYKFALAKMREGMKCKVKLSELDDGTLNIKEIA
Ga0255225_101142313300024537FreshwaterVFSSMYKIALAKMREGMVCQVVLSKLDDGTLMVKEIK
Ga0255288_111618133300024561FreshwaterMAHIVMSDKYKNLKRAIVFSSMYPIALAKMRDGMTCKPVTKILDDGTLMIKEIK
Ga0255268_118608633300024572FreshwaterPTMYKQTLAKMREGMRCKPILSKLEDGTLNIKEIK
Ga0256337_108832213300024573FreshwaterVFSTMYKIALAKMREGMICNVTLSKLDDGTLMVKEIK
Ga0256340_115150033300024865FreshwaterKTMSHIVMSDKDKNLTRAIAFPSMYKITLAKMRDGMKCKPVLSKLDDGTLMIKEIK
Ga0208546_111080533300025585AqueousMSDKDKKLTRAIAFPAMYKITLAKMRDGMKCKPVLSKLDDGTLMIKEIK
Ga0255155_107320933300026455FreshwaterMSHIVMSDKDKNLTRAIAFPSMYKITLAKMRDGMKCKPVLSKLDDGTLMIKEIK
Ga0255156_1002121123300026478FreshwaterRNKNLTRCIVFSTMYKIALAKMREGMKCKVTLSKLDDGTLMVKEIK
Ga0255289_105469643300026571FreshwaterVFSTMYKIALAKMREGMVCDVVINKLDDGTLMIKEIK
Ga0255269_110032943300026573FreshwaterAFPTMYKFALAKMREGMKCKVKLSELDDGTLNIKEIA
Ga0255073_101609843300027135FreshwaterAGKTMAHIVLSDRDKNLTRAIVFSSMYKIALAKMREGMKCQVILSKLDDGTLMIKEIK
Ga0255064_106597413300027138FreshwaterIVLSDRDKNLTRAIVFSSMYKIALAKMREGMKCQVILSKLDDGTLMIKEIK
Ga0255083_100788513300027153FreshwaterDKNLTRAIVFSSMYKIALAKMREGMKCQVILSKLDDGTLMIKEIK
Ga0208809_106896013300027251EstuarineIVLSDKDKNLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIA
Ga0208027_100683963300027260EstuarineSHIVLSDKNKVLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIK
Ga0208810_104395543300027304EstuarineFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK
Ga0208923_104724943300027320EstuarineTRAIAFPTMYKMALAKLREGMKCKITLSKLDDGTLMVKEIK
Ga0208923_106850013300027320EstuarineSDRDKKLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIK
Ga0255087_108895913300027337FreshwaterMAHIVLSDRDKNLTRAIVFSSMYKIALAKMREGMKCQVILSKLDDGTLMIKEIK
Ga0255210_102604313300027339FreshwaterKAGKTMSHIVMSDKDKNLTRAIAFPSMYKITLAKMREGMKCKPVLSKLDDGTLMIKEIK
Ga0208801_104946813300027367EstuarineKAGKQMSHIVLSDKNKVLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIK
Ga0255146_111746033300027396FreshwaterASMYPVALAKMRDGMTCKPITKELDDGTLMIKEIK
Ga0255154_108042213300027467FreshwaterRAIAFPTMYKFALAKMREGMKCKVKLSELDDGTLNIKEIA
Ga0209247_100902333300027468Freshwater LakeNLTRAIVFPSMYKISLAKMREGMKCQVILSTLDDGTLMIKEIK
Ga0255086_100882513300027486FreshwaterKTKAGKTMAHIVLSDRDKNLTRAIVFSSMYKIALAKMREGMKCQVILSKLDDGTLMIKEI
Ga0255182_108955713300027503FreshwaterDKDKKLTRAIAFPAMYKITLAKMRDGMKCKPVLSKLDDGTLMIKEIK
Ga0255182_111715513300027503FreshwaterPSMYKITLAKMRDGMKCKPVLSKLDDGTLMIKEIK
Ga0255158_109888713300027541FreshwaterIVMSDKYKNLKRAIVFASMYPVALAKMRDGMTCKPITKELDDGTLMIKEIK
Ga0209552_119504313300027563Freshwater LakeYTTKAGKQMSHIVLSDRDKKLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIK
Ga0208897_118318233300027571EstuarineKTMAHLVMSDKDKNLNRAIVFSSMYPLSLAKMREGMICEPVLKTLEDGTLMVKEVK
Ga0208133_106384413300027631EstuarineAIVFSSMYKIALAKMREGMTCQVVLSKLDDGTLMIKEIK
Ga0209356_119366813300027644Freshwater LakeHIVLSDKDKNLTRAIVFPSMYKISLAKMREGMKCQVILSTLDDGTLMIKEIK
Ga0209087_123171733300027734Freshwater LakeNKELTRAIAFPTMYKMSLAKMREGMKCKVTLSTLDDGTMMVKEIK
Ga0209596_108497813300027754Freshwater LakeQKELTRVIAFPTMYKMSLAKMREGMKCNVVLSTLDDGTLMVKEIK
Ga0209596_125363833300027754Freshwater LakeMSHIVLSDKDKNLTRAIAFPAMYKMTLAKMREGMKCKVTLAKLDDGTLNIKEIK
Ga0209296_134104633300027759Freshwater LakeLSNADKQLTRVIVFPTLYKISLAKMREGMKCKLVLSKLDDGTLNVKEIKXQK
Ga0209768_1043969813300027772Freshwater LakeMSHIVLSDKDKNLTRAIVFPSMYKISLAKMREGMKCQVVLSTLDDGTLMIKEIK
Ga0209246_1013860813300027785Freshwater LakeDKDKNLTRAIVFPSMYKISLAKMREGMKCQVVLSTLDDGTLMIKEIK
Ga0209246_1026102633300027785Freshwater LakeNKVLTRAIVFPTMYGKAVGKMREGMTCKIVLSKLDDGTLMVKEIK
Ga0209972_1028997933300027793Freshwater LakePTMYKIALAKMREGMKCQVILSKLDDGTLNIKEIK
Ga0209229_1018811113300027805Freshwater And SedimentLTRAIAFPTMYKMTLAKMREGMKCKVVLSKLDDGTLNVKEIK
Ga0209990_1000856113300027816Freshwater LakeAGKTMAHIVLSDKDKNLTRAIVFSSMYKIALAKMREGMKCQVILSKLDDGTLMIKEIK
Ga0209990_1009428513300027816Freshwater LakeAGKTMAHIVLSDKDKNLTRAIVFSSMYKIALAKMREGMKCQVVLSKLDDGTLMIKEIK
Ga0209550_1023076413300027892Freshwater LakeFSSMYPLSLAKMREGMICEPVLKTLEDGTLMVKEVK
Ga0209550_1032264213300027892Freshwater LakeTKAGKTMSHIVLSDKDKNLTRAIVFPSMYKISLAKMREGMKCQVVLSTLDDGTLMIKEIK
Ga0209550_1060609413300027892Freshwater LakeIAFPTMYKMSLAKMREGMKCKVVLSTLDDGTLMVKEIK
Ga0209191_134484113300027969Freshwater LakeKAGKTMSHIVLSDKDKNLTRAIVFPSMYKISLAKMREGMKCQVVLSTLDDGTLMIKEIK
Ga0255172_108220413300028103FreshwaterKTMSHIVMTNKDKELVRAIAFPTMYKQTLAKMREGMRCKPILSKLEDGTLNIKEIK
Ga0256331_102768013300028286FreshwaterAHIVMSDKYKNLKRAIVFASMYPVALAKMRDGMTCKPITKELDDGTLMIKEIK
Ga0256331_112779733300028286FreshwaterQTMAHIVMSDKYKNLKRAIVFSSMYPIALAKMRDGMTCKPVTKILDDGTLMVKEIK
Ga0315899_1010439913300031784FreshwaterIVLSDKNKVLTRAIAFPTMYKMTLAKMREGMKCKVVLSKLDDGTLNVKEIK
Ga0315899_1038855213300031784FreshwaterNKDKDLTRAIAFPSMYKMSLAKMREGMSCKVVLSKLDDGTLMVKEIK
Ga0315900_1022363613300031787FreshwaterTRAIVFSSMYKIALAKMREGMKCQVVLSKLDDGTLMIKEIK
Ga0315909_1033027213300031857FreshwaterVLSDKDKNLTRVIVFPAMYKVALAKMRDGMKCKVVLSKLDDGTLNVKEIK
Ga0315909_1071972113300031857FreshwaterKDKNLTRAIVFSSLYKIALAKMREGMKCQVIISKLDDGTLNIKEIK
Ga0315909_1072661513300031857FreshwaterAGKTMAHIVMSDKDKNLTRAIAFSSIYPIALAKMREGMICRPILKKLDDGTLMIKEIK
Ga0315909_1076075813300031857FreshwaterIVMSDKDKNLTRAIAFSSTYPIALAKMREGMVCKPVLKKLDDGTLMIKEIK
Ga0315904_1033179413300031951FreshwaterKTMAHIVMSDKDKNLTRAIVFSSMYKIALAKMREGMKCQVVLSKLDDGTLMIKEIK
Ga0315901_1001645913300031963FreshwaterHIVMSDKDKNLTRAIAFSSMYPIALAKMREGMICTPILKKLDDGTLMIKEIK
Ga0315901_1107331413300031963FreshwaterMAHIVLSDKDKNLTRAIVFSSLYKIALAKMREGMKCQVIISKLDDGTLNIKEIK
Ga0315906_1013167663300032050FreshwaterKTMSHIVLSDKNKVLTRAIAFPTMYKMTLAKMREGMKCKVVLSKLDDGTLNVKEIK
Ga0315906_1096375933300032050FreshwaterTRCIVFSTMYKIALAKMREGLRCKVVLSKLDDGTLMVKEIK
Ga0315902_1108425933300032093FreshwaterKVLTRAIVFSSLYKIALAKMREGMKCQVILSKLDDGTLMVKEIK
Ga0315903_1070377333300032116FreshwaterIVMTDKDKNLTRAIAFPTLYKIALAKMREGMKCKVVLSKLDDGTLNIKEIK
Ga0315903_1093562133300032116FreshwaterNANKELTRVIAFPTMYKMSLARMREGMKCKVVLSTLDDGTLMVKEIK
Ga0335004_0010762_6594_67223300034021FreshwaterLTRAIAFPAMYKMTLAKMREGMKCKVTLSKLDDGTLSIKEIK
Ga0335005_0535384_41_1843300034022FreshwaterVLEKELTRAIVFPTLYKMSLAKMREGMKCKVVLSKLDDGTLNVKEIK
Ga0335005_0663225_337_5043300034022FreshwaterMMSHIVLSNADKQLTRVIVFPTLYKISLAKMREGMKCKLVLSKLDDGTLNVKEIK
Ga0335005_0694549_397_5373300034022FreshwaterRDKELTRAIAFPAMYKMTLAKMREGMKCKVTLSKLDDGTLSIKEIK
Ga0335000_0206997_1_1083300034063FreshwaterSSLYKIALAKMREGMKCQVIISKLDDGTLNIKEIK
Ga0335019_0001461_1_1563300034066FreshwaterIVLSDKDKNLTRAIAFPAMYKMTLAKMREGMKCKVTLSKLDDGTLNIKEIK
Ga0335020_0261513_698_8533300034082FreshwaterLVFSDRDKNLTRAIAFPTLYKMALAKMREGMKCKVTLSKLDDGTLMIKEIK
Ga0335012_0295571_609_7763300034093FreshwaterMMSHIVLSNAQKELTRAIVFPTLYKMSLAKMREGMKCKVVLAKLDDGTLNVKEIK
Ga0335029_0560250_495_6443300034102FreshwaterLSNRNKELTRAIAFPTMYKMTLAKMREGMKCKVVLSKLDDGTLNVKEIK
Ga0335051_0010130_5088_52163300034109FreshwaterLTRAIVFSSMYPISLAKMREGMICEPILKSLEDGTIMVKEIK
Ga0335016_0323841_3_1133300034166FreshwaterFSSLYKIALAKMREGMKCQVILSKLDDGTLMVKEIK
Ga0335052_0437448_559_6873300034279FreshwaterLTRVIAFPTMYKMSLAKMREGMKCKVVLSKLDDGTLNIKEIL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.