Metagenome Family F018633

Basic Information
Family ID	F018633
Family Type	Metagenome
Number of Sequences	234
Average Sequence Length	47 residues
Representative Sequence	MGFRLKLREPLPDGLKRVFCEQIESALKLCRHPAKQRGVTVHEVRKH
Number of Associated Samples	186
Number of Associated Scaffolds	234

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.07 %
% of genes near scaffold ends (potentially truncated)	94.87 %
% of genes from short scaffolds (< 2000 bps)	87.18 %
Associated GOLD sequencing projects	178
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (95.726 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.949 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.573 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1GPIPI_02906660 2GPIPI_03110840 3L02_05948640 4FG2_03008330 5INPhiseqgaiiFebDRAFT_1043176781 6AF_2010_repII_A100DRAFT_10435283 7JGI11643J12802_111040792 8JGI11643J12802_112880752 9JGI11643J12802_116958204 10JGI11643J12802_121793461 11JGI11643J12802_122962521 12JGI10216J12902_1195854371 13F14TB_1010927632 14JGI24035J26624_10185991 15Ga0055435_100156144 16Ga0063454_1001586693 17Ga0062590_1023885921 18Ga0062592_1025932761 19Ga0062594_1002088051 20Ga0062594_1005010061 21Ga0066810_101969652 22Ga0066683_104455631 23Ga0066673_103910011 24Ga0066685_107514941 25Ga0065704_102486632 26Ga0065712_101808563 27Ga0065705_101763685 28Ga0065705_107284111 29Ga0070675_1005184691 30Ga0070659_1005404593 31Ga0070709_113270501 32Ga0070713_1005534571 33Ga0070713_1008356172 34Ga0070713_1021453751 35Ga0070713_1023413512 36Ga0070710_114454341 37Ga0070711_1002005364 38Ga0070711_1003605184 39Ga0070708_1018808412 40Ga0066682_104140862 41Ga0066682_109238161 42Ga0066681_109353402 43Ga0066687_100757701 44Ga0066687_106819431 45Ga0070662_1016751982 46Ga0066697_100174851 47Ga0066697_106180982 48Ga0070665_1001312571 49Ga0066695_100223847 50Ga0066707_108748932 51Ga0066693_102907461 52Ga0066702_100574865 53Ga0066702_101199314 54Ga0066708_103998051 55Ga0066708_106890061 56Ga0066706_105995241 57Ga0068864_1009082391 58Ga0066903_1002091011 59Ga0066903_1018002873 60Ga0066903_1023126911 61Ga0066903_1071860552 62Ga0068858_1018015051 63Ga0068860_1015121232 64Ga0081455_101537021 65Ga0066696_101986334 66Ga0066696_106496411 67Ga0066652_1004984223 68Ga0066652_1014112712 69Ga0075028_1007281791 70Ga0070715_101974013 71Ga0066653_102695911 72Ga0066653_102887522 73Ga0066658_108728441 74Ga0066665_110170201 75Ga0066665_114318992 76Ga0066660_115834072 77Ga0075431_1019711491 78Ga0075433_110371172 79Ga0075424_1028820851 80Ga0075435_1005776543 81Ga0066710_1013776993 82Ga0105250_104100882 83Ga0105250_105866952 84Ga0066709_1005596061 85Ga0066709_1018312042 86Ga0105243_101572185 87Ga0105241_115922831 88Ga0126305_110926981 89Ga0126308_102925614 90Ga0126373_106953901 91Ga0134082_100755133 92Ga0134109_102045133 93Ga0134086_101703001 94Ga0134064_100279971 95Ga0134080_100339931 96Ga0134063_101669683 97Ga0126370_105077523 98Ga0126370_105666161 99Ga0126370_112156812 100Ga0126376_116773012 101Ga0126372_104818443 102Ga0126378_103784291 103Ga0126377_109071251 104Ga0126377_116665371 105Ga0134128_105700563 106Ga0134128_116643041 107Ga0126381_1024556112 108Ga0134123_100559254 109Ga0105246_125645662 110Ga0137364_101930554 111Ga0137364_102307204 112Ga0137364_102507183 113Ga0137364_106975141 114Ga0137383_101625494 115Ga0137383_107051432 116Ga0137382_103519391 117Ga0137363_104780353 118Ga0137381_104350731 119Ga0137376_100993931 120Ga0137379_103463144 121Ga0137370_108525631 122Ga0137370_108770351 123Ga0137370_109085892 124Ga0137386_104313571 125Ga0137386_112039631 126Ga0137366_103866583 127Ga0137371_100421481 128Ga0137371_111724262 129Ga0137375_112905192 130Ga0137360_102423973 131Ga0157339_10483691 132Ga0137373_112634512 133Ga0157304_10543231 134Ga0157292_101543572 135Ga0157301_104401341 136Ga0137394_104347393 137Ga0137413_103139761 138Ga0126375_106640262 139Ga0164298_100669504 140Ga0164303_115292832 141Ga0164301_101539192 142Ga0126369_136356662 143Ga0134087_102605222 144Ga0157371_104505061 145Ga0157374_100341141 146Ga0157374_102453524 147Ga0157375_101156201 148Ga0134075_101860571 149Ga0134075_102153241 150Ga0134078_100776064 151Ga0157377_103997102 152Ga0157376_112039531 153Ga0134089_105248101 154Ga0132255_1045168862 155Ga0182035_118822022 156Ga0182034_110924621 157Ga0187825_100037911 158Ga0187823_102022471 159Ga0184605_102330511 160Ga0184617_10771991 161Ga0184618_103086931 162Ga0184635_102587021 163Ga0184609_101427491 164Ga0184609_102219303 165Ga0066667_101212684 166Ga0066667_105838883 167Ga0066667_117174881 168Ga0066667_122277342 169Ga0190269_106205391 170Ga0066662_108993651 171Ga0066662_121804291 172Ga0173479_102661502 173Ga0193703_10199503 174Ga0193725_11154432 175Ga0193747_10981432 176Ga0193697_10998541 177Ga0193735_10175723 178Ga0193721_11727012 179Ga0193733_11434162 180Ga0210378_104092701 181Ga0193695_10899972 182Ga0193695_11116242 183Ga0126371_136998882 184Ga0222622_100830463 185Ga0247695_10558191 186Ga0247668_11063512 187Ga0207653_101587532 188Ga0207710_107732732 189Ga0207684_105970423 190Ga0207654_107253291 191Ga0207693_101999381 192Ga0207693_114263761 193Ga0207649_107235791 194Ga0207650_114009282 195Ga0207687_100997965 196Ga0207700_102854643 197Ga0207644_105313273 198Ga0207669_118107171 199Ga0207691_102088924 200Ga0207679_104613771 201Ga0207658_119157021 202Ga0207677_120798772 203Ga0209238_10088866 204Ga0209155_11512333 205Ga0209266_12982252 206Ga0209267_12137092 207Ga0209058_11852201 208Ga0209156_100163981 209Ga0209161_103181621 210Ga0209474_106923412 211Ga0209648_107506221 212Ga0208575_10065553 213Ga0207486_10073861 214Ga0268266_107178942 215Ga0137415_101433654 216Ga0307283_100019297 217Ga0307290_100463113 218Ga0307287_102029611 219Ga0170822_154109831 220Ga0170823_164938522 221Ga0170820_159080533 222Ga0310813_123906812 223Ga0306918_103703521 224Ga0310904_105476761 225Ga0310904_110506892 226Ga0306923_117889001 227Ga0310901_103426861 228Ga0310913_110676241 229Ga0310903_106216411 230Ga0310890_113753142 231Ga0310895_100992753 232Ga0310895_105213391 233Ga0335079_122006082 234Ga0310810_109762701
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1GPIPI_02906660 2GPIPI_03110840 3FG2_03008330 4INPhiseqgaiiFebDRAFT_1043176781 5JGI11643J12802_111040792 6JGI24035J26624_10185991 7Ga0055435_100156144 8Ga0062594_1005010061 9Ga0070709_113270501 10Ga0070711_1003605184 11Ga0066708_106890061 12Ga0066706_105995241 13Ga0066665_114318992 14Ga0075435_1005776543 15Ga0126370_112156812 16Ga0105246_125645662 17Ga0137383_101625494 18Ga0137383_107051432 19Ga0182035_118822022 20Ga0066667_105838883 21Ga0193735_10175723
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46. 1Ga0134086_101703001 2INPhiseqgaiiFebDRAFT_1043176781 3JGI11643J12802_116958204 4JGI11643J12802_122962521 5JGI10216J12902_1195854371 6F14TB_1010927632 7Ga0055435_100156144 8Ga0063454_1001586693 9Ga0062592_1025932761 10Ga0062594_1005010061 11Ga0065712_101808563 12Ga0070711_1002005364 13Ga0070708_1018808412 14Ga0066682_109238161 15Ga0066681_109353402 16Ga0066687_106819431 17Ga0066697_100174851 18Ga0066693_102907461 19Ga0066702_100574865 20Ga0068864_1009082391 21Ga0066903_1071860552 22Ga0066665_114318992 23Ga0075424_1028820851 24Ga0105241_115922831 25Ga0126305_110926981 26Ga0126308_102925614 27Ga0126370_105666161 28Ga0126370_112156812 29Ga0126381_1024556112 30Ga0137364_102307204 31Ga0137364_106975141 32Ga0137383_101625494 33Ga0137383_107051432 34Ga0137370_108525631 35Ga0137386_104313571 36Ga0137366_103866583 37Ga0137371_111724262 38Ga0137360_102423973 39Ga0164301_101539192 40Ga0134075_101860571 41Ga0182035_118822022 42Ga0187825_100037911 43Ga0066667_105838883 44Ga0193747_10981432 45Ga0193733_11434162 46Ga0247695_10558191 47Ga0247668_11063512 48Ga0207693_114263761 49Ga0209238_10088866 50Ga0170822_154109831 51Ga0306918_103703521 52Ga0310895_105213391 53Ga0335079_122006082
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.00% β-sheet: 0.00% Coil/Unstructured: 68.00%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Pfam ID	Name	% Frequency in 234 Family Scaffolds
PF01928	CYTH	8.97
PF00149	Metallophos	2.56
PF12850	Metallophos_2	1.71
PF16930	Porin_5	0.85
PF04185	Phosphoesterase	0.85
PF00291	PALP	0.43
PF14716	HHH_8	0.43
PF00534	Glycos_transf_1	0.43
PF07396	Porin_O_P	0.43
PF05235	CHAD	0.43

COG ID	Name	Functional Category	% Frequency in 234 Family Scaffolds
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.85
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.43
COG3746	Phosphate-selective porin	Inorganic ion transport and metabolism [P]	0.43
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.43

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.73 %
Unclassified	root	N/A	4.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.73 %
Unclassified	root	N/A	4.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.73 %
Unclassified	root	N/A	4.27 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	13.25 %
Unclassified	root	N/A	4.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.27 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	13.25 %

Name	Rank	Taxonomy	Distribution
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.85 %
Unclassified	root	N/A	4.27 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	7.69 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.85 %
Unclassified	root	N/A	4.27 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.69 %

Name	Rank	Taxonomy	Distribution
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.85 %
Unclassified	root	N/A	4.27 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.43 %
Unclassified	root	N/A	4.27 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.43 %
Unclassified	root	N/A	4.27 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.69 %

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16557663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3012	Open in IMG/M
2088090014\|GPIPI_16603941	All Organisms → cellular organisms → Bacteria	4642	Open in IMG/M
2170459007\|GJ61VE201A9HXN	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
2189573004\|GZGWRS402GYCEX	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104317678	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1043528	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300000890\|JGI11643J12802_11288075	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300000890\|JGI11643J12802_11695820	All Organisms → cellular organisms → Bacteria	4055	Open in IMG/M
3300000890\|JGI11643J12802_12179346	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300000890\|JGI11643J12802_12296252	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.91%
Host-Associated	Host-Associated	17.09%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	5.13%
Plants	Host-Associated → Plants	17.09%
Terrestrial	Environmental → Terrestrial	77.78%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	1.28%
Marine	Environmental → Aquatic → Marine	0.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.82%
Sediment	Environmental → Aquatic → Sediment	3.42%
Soil	Environmental → Terrestrial → Soil	77.78%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.99%
Loam	Environmental → Terrestrial → Soil → Loam	10.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.85%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.43%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.08%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.28%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.43%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.43%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.43%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.43%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.43%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.43%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.71%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.43%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.43%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.28%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.43%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.43%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.43%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M

Showing 1 to 10 of 186 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02906660	2088090014	Soil	MAFRLKLREPLPEGLKRVFCEQVNSALHMCQNPAKQRGVTVHEVRKH
GPIPI_03110840	2088090014	Soil	MGFRLKLREPLPEGLKRVFREEIDSALQLCHHPAKERGVTVHEV
L02_05948640	2170459007	Grass Soil	MGFRLKLREPLPDGLKRVFREQIESALELCRHPAKQRGVTVHE
FG2_03008330	2189573004	Grass Soil	MAFRLKLREPLPEGLKRVFCEQIDSALRCCQNPAKQRGV
INPhiseqgaiiFebDRAFT_1043176781	3300000364	Soil	MSYRLKKSETPAEGLKRIFREEIEAALDLCXHPVAERGVTVHEVRKHLKKL
AF_2010_repII_A100DRAFT_10435283	3300000655	Forest Soil	MGFRLKLREPLSDGLKRVFREQIQSALELCRHPAKERGVTVHEVRKH
JGI11643J12802_111040792	3300000890	Soil	LPEGLKRVFREEIDSAFHMCQHPAKQRGVTVHEVRKHLKKLRAAMRLAIGQVGKNCHA
JGI11643J12802_112880752	3300000890	Soil	MGFRLKLREPLPDGLKRVFREQIESALELCRHPAKQRGVT
JGI11643J12802_116958204	3300000890	Soil	MAFRLKLREPLPDGLKRVFSEQIDSALRCCHNPAKQRGV
JGI11643J12802_121793461	3300000890	Soil	MAFRLKLREPLSKGLKRVFCEQIDSALHCCQNPAKQRGVTVH
JGI11643J12802_122962521	3300000890	Soil	MGFRLKLREPLPDGLKRVLREQIDSALRLCRHPAKERGVT
JGI10216J12902_1195854371	3300000956	Soil	MGFRLKLREPLPEGLKRVFREQIDSALHRCENPAKQRGVTVHEVRKHLK
F14TB_1010927632	3300001431	Soil	MGFRLQLREPLPDGLKRVFREQIESALHLCQHPAKQRGV
JGI24035J26624_10185991	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	MAFCLKLREPLPTGLKRVFCEQIDAALHCCQHPAKQRGVTVHEVRKHLKKLRAAMRLAVGVVGKNCHAKEDR
Ga0055435_100156144	3300003994	Natural And Restored Wetlands	MGFRLKLRESRDVGNGLKRISCEQIDSALKLCRHPAMQRGVTVHEVRKDLKKLRAAMRLAIGEVGK
Ga0063454_1001586693	3300004081	Soil	MSFCLKLRERLPQGVKRVFREQIDGALHCCQHPAKQRGVTVHEVRKHLKKLRAAMRLAVC
Ga0062590_1023885921	3300004157	Soil	MAFCLKLREPLSEGLKRIFCEEIDAALHLCQHPAKQRGVTVHEV
Ga0062592_1025932761	3300004480	Soil	MAFCLKLREPLPKGLKRVFCEQIDSALHCCQRPAKQRGVIVHEVRKHLKKLRA
Ga0062594_1002088051	3300005093	Soil	MGFRLKLREPLPDGLKRVFREQIESALELCRHPAKQRGVTVHEV
Ga0062594_1005010061	3300005093	Soil	MGFRLKLREPLADGLKRVFREQIDAALRLCRHPAKQRGVTVHEVRKHLKKLRAA
Ga0066810_101969652	3300005169	Soil	MAFRLKLREPLPEGLKRVFCEQIDSALHLCQNPAKQRGVTVHEVRK
Ga0066683_104455631	3300005172	Soil	MGFRLKLREPLPDGLKRVFREQIESALKLCRNPSKQRGVTVHEV
Ga0066673_103910011	3300005175	Soil	MAFRLKLREPLPEGLKRVFCEQIDSALHLCQNPAKQRGVTVH
Ga0066685_107514941	3300005180	Soil	MGFRLKLREPLPNGLKRVFREQIESALQLCRHPAKQRGVTVHEVRKHLK
Ga0065704_102486632	3300005289	Switchgrass Rhizosphere	MGFKLKLREPLPDGLKRVFREQIESALVLCRHPAKQRGVTVHEVRKHLKKA
Ga0065712_101808563	3300005290	Miscanthus Rhizosphere	MGFCLKLREPLSEGLKRVFCEQIDAALHLCRHPAKQRGVTVHEVRKHLKK
Ga0065705_101763685	3300005294	Switchgrass Rhizosphere	MAFRLKLREPLPEGLKRVFCEQIDSALHLCQNPAKQRGVTVHEVRKHLKKLRA
Ga0065705_107284111	3300005294	Switchgrass Rhizosphere	MAFCLKLREPLPKGLKRVFCEQIDSALHCCQRPAKQRGVI
Ga0070675_1005184691	3300005354	Miscanthus Rhizosphere	MGFRLKLREPLPDGLKRVFREQIDSALRLCRHPAKERGVTVHEVRKHLKKLR
Ga0070659_1005404593	3300005366	Corn Rhizosphere	MGFRLKLREPLPDGLKRVFREQIDSALRLCRHPAKERGVTVHEV
Ga0070709_113270501	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSYCLKLREPLPKGLKRIFREQIQSALKLCRHPAKEPGVTVH
Ga0070713_1005534571	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAFRLKLREPLPQGLKRVFCEQIDSALRLCQHPAKQRGVTVHAVRKHLKKLR
Ga0070713_1008356172	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGFRLKLREPLPDGLKRVFREQIESALKLCRHPARQRGVTVHEVRKHLKKL
Ga0070713_1021453751	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAFRLKLREPLPEGLKRVFCEQIDSALRLCQHPAKQRGVTVHAVRKHLKKLR
Ga0070713_1023413512	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAFCLKLREPLPTGLKRVFCEQIDAALHCCQHPAKQRGVTVHEVRKHLKK
Ga0070710_114454341	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSYRLKSGELPSDGLKRIFRQEIEAALELCRHPAAERGVTVHEVRKHLKKLR
Ga0070711_1002005364	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAFRLKLREPLPQGLKRVFCEQIDSALRLCQHPAKQRGVTVHAVRKHLKK
Ga0070711_1003605184	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGYCLKLREPLSKGLKRIFREEIESAVRLCRHPARQRGVTVHEVRKHL
Ga0070708_1018808412	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAFRLRLREPLSEGLKRVFCEQIDSALHCCQNPAKHRGVTVHEVRKHLK
Ga0066682_104140862	3300005450	Soil	MGFRLKLREPLPDGLKRVFCEQIESALKLCRNPSKQRGVTVHEVRKHLKKLRA
Ga0066682_109238161	3300005450	Soil	MGYCLKFRETLAEGLARIFREEIAAAVGLCRHPAKQRGVTVHEVRKHL
Ga0066681_109353402	3300005451	Soil	MAFRLKLREPLPDGLKRVFSEQIDSALHLCQHPTKQRGVT
Ga0066687_100757701	3300005454	Soil	MGFRLKLREPLPDGLKRVFREQVQSALGLCRHPAKQRGVTVHEVRKHLKKLR
Ga0066687_106819431	3300005454	Soil	MGYCLKLREALPKGLKRIFREEIEAAVRLCRHPARQRGVTVHEVRKHLKKLRA
Ga0070662_1016751982	3300005457	Corn Rhizosphere	MAFRLKLREPLSKGLKRVFCEQIDSALHCCQNPAKQRGVTVHEVRKHLKKLRAAM
Ga0066697_100174851	3300005540	Soil	MGYRLKLREPLPEGLKRVFREQIDSALELCRHPARQRGVTVHEVRKHLK
Ga0066697_106180982	3300005540	Soil	MGFRLKLREPLPDGLKRVFCEQIESALKLCRHPAKQRG
Ga0070665_1001312571	3300005548	Switchgrass Rhizosphere	MAFCLKLREPLSQGLKRVFCEQIDAALHLCQHPAKQRG
Ga0066695_100223847	3300005553	Soil	MGFKLKLREPLPDGLKRVFCEQIESALKLCRHPAKQRGVTVHEVRKH
Ga0066707_108748932	3300005556	Soil	MGFRLKLREPLSEGLKRVFWEQIDSALHRCENPAKQRGVTVHEVRKHLKK
Ga0066693_102907461	3300005566	Soil	MGFRLKLREPLTGGLKRVFCEQIDSALHLCQHPAKQRGVTVHEVRKHLKKVRAAMRLAI
Ga0066702_100574865	3300005575	Soil	MGYCLKLRERLSDGLTRIFQEEIDSAAGLCRHPAKQRGVTVHEVRKHLKKLRTS
Ga0066702_101199314	3300005575	Soil	MGFKLKLREPLPDGLKRVFREQIESALELCRHPAKQRGVTVHEVRKHLK
Ga0066708_103998051	3300005576	Soil	MAFRLKLREPLREGLKRVFCEEIDSALHMCQHPAKERGVTVHE
Ga0066708_106890061	3300005576	Soil	MGYRLKLREPLSDGLTRVFCEQIQSALELCRHPAKQRG
Ga0066706_105995241	3300005598	Soil	MGYCLKLREPLADGLKRIFCEEIDAAVGLCRHPAKQR
Ga0068864_1009082391	3300005618	Switchgrass Rhizosphere	MAFKLKLREPLSEGLKRVFSEQIESALHCCQHPANQRGVTVHEVRKHL
Ga0066903_1002091011	3300005764	Tropical Forest Soil	MAFRLKLREPLPDGLKRVFCEEIDSALYMCQHPARERGVTVHEVR
Ga0066903_1018002873	3300005764	Tropical Forest Soil	MGFRLKLREPLPEGLKRVFREQIDLALHLCQHPAKQRGVTVHE
Ga0066903_1023126911	3300005764	Tropical Forest Soil	MGFRLKLREPLSEGLKRVFREQIDSALHRCENPAKQRGVTVHEA
Ga0066903_1071860552	3300005764	Tropical Forest Soil	MGFRLKLREPLPDGLKRVFREQVDSALELCRHPAKHRGV
Ga0068858_1018015051	3300005842	Switchgrass Rhizosphere	MAFCLKLREPLPTGLKRVFCEQIDAALHCCQHPAKQRGVTVHEVRKHLKKLRAAM
Ga0068860_1015121232	3300005843	Switchgrass Rhizosphere	MGFRLKLREPLPDGLKRVFREQVESALELCRHPAKQRGVTVHEVRK
Ga0081455_101537021	3300005937	Tabebuia Heterophylla Rhizosphere	MAFRLKLRESLPGGLKRVFCEQIDSALRCCQHPAKQRGVTVHEVR
Ga0066696_101986334	3300006032	Soil	MGYCLKLREPLADGLKRIFCEEIDAAVGLCRHPAKQRGVTVHEVRKHLKKLRAA
Ga0066696_106496411	3300006032	Soil	MGYCLKLREPLSKGVKRIFREEIEAAVRLCRHPARQRGVTVHEVR
Ga0066652_1004984223	3300006046	Soil	MGFRLKLREPLPEGLKRVFGEEIDSALHMCQHPAKERGV
Ga0066652_1014112712	3300006046	Soil	MGFRLKLREPLPEGLKRVFREEIDSALHMCQHPAKERGVTVHEV
Ga0075028_1007281791	3300006050	Watersheds	MAFRLKLREPLPEGLKRVFCEQIDSALRLCQNPAKQRGVTVHEVR
Ga0070715_101974013	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MGFRLKLREPLPDGLKRVFREQIESALELCRHPAKQRGITVHEVRKHLKK
Ga0066653_102695911	3300006791	Soil	MGYCLKLREPLADGLKRIFCEEIDAAVGLCRHPAKQRGVTVHEVRK
Ga0066653_102887522	3300006791	Soil	MGYRLTLREPLSDGLTRVFCEQIQSALELCRHPAKQRGVTVHEVRKYLKKLRAAMRLAVGEVGKNRHARE
Ga0066658_108728441	3300006794	Soil	MGYCLKLRERLSDGLTRIFQEEIDSAAGLCRHPAKQRGVT
Ga0066665_110170201	3300006796	Soil	MSFRLKLREPLPNGLKRVFREQIESALRLCRHPAKQRGVTVHEV
Ga0066665_114318992	3300006796	Soil	MGYCLKLRERLSDGLTRIFDEEVDAAVGLCRHPAKQRGVSVHEVR
Ga0066660_115834072	3300006800	Soil	MGFRLKLREPLSEGLKRVFWEQIDSALHRCENPAKQRGVT
Ga0075431_1019711491	3300006847	Populus Rhizosphere	MAFRLKLREPLPKGLKRVFCEQINSALHCCQNPAKQRGVTVH
Ga0075433_110371172	3300006852	Populus Rhizosphere	MGFRLKLREPLPDGLKRVFREQIESALELCRHPARQRGVTVHEVRKHL
Ga0075424_1028820851	3300006904	Populus Rhizosphere	MGFRLKLREPLPEGLKRVFREQIESALEMCRHPAKERGVTVHEVRKHLKKL
Ga0075435_1005776543	3300007076	Populus Rhizosphere	MGFRLKLREPLPEGLKRVFREQIESGLELCRHPAR
Ga0066710_1013776993	3300009012	Grasslands Soil	MAFRLKLREPLPKGLKRVFCEQIDSALHMCQHPAKERGVTVHEVRKHLK
Ga0105250_104100882	3300009092	Switchgrass Rhizosphere	MGFRLKLREPLADGLKRVFREQIDAALRLCRHPAKQRGVTVH
Ga0105250_105866952	3300009092	Switchgrass Rhizosphere	MAFCLKLREPLPTGLKRVFCEQIDSALHSCQNPAKQRGVTVHEVRKHLKKLRAAM
Ga0066709_1005596061	3300009137	Grasslands Soil	MGFRLKLRESLPDGLKRVFREQMQSALELCRHPAKQ
Ga0066709_1018312042	3300009137	Grasslands Soil	MGFRLKLREPLPDGLTRVFREQVQSALELCRHPAKERGVTVHEVRKHLKK
Ga0105243_101572185	3300009148	Miscanthus Rhizosphere	MGFRLKLREPLADGLKRVFREQIDAALRLCRHPAKQRGV
Ga0105241_115922831	3300009174	Corn Rhizosphere	MAFRLKLREPLPEGLKRVFCEQIDCALHSFQHPAKQRGVTVHEVRKHLKKLR
Ga0126305_110926981	3300010036	Serpentine Soil	MAFCLKSRETLPGGLKRVFREQIDSALHLCQHPAKQRGVTVHEVRKH
Ga0126308_102925614	3300010040	Serpentine Soil	MALRLKLREPLPRGLKRVFCEQIDSALHLCQHPAKQPGVTVKEVRKHL
Ga0126373_106953901	3300010048	Tropical Forest Soil	MGFRLKLREPLSDGLKRVFREQIQSALELCRHPAKE
Ga0134082_100755133	3300010303	Grasslands Soil	MGFRLKLREPLPDGLKRVFREQIESALKLCRHPAKQRG
Ga0134109_102045133	3300010320	Grasslands Soil	MGFRLKLREPLPDGLKRVFREQIQSALELCRNPAKQRGVTVHEVRKH
Ga0134086_101703001	3300010323	Grasslands Soil	MGFRLKLREPLPDGLKRVFCEQIESALKLCRHPAKQRGVTVHEVRKH
Ga0134064_100279971	3300010325	Grasslands Soil	MGFRLKLREPLPDGLKRVFREQIQSALELCRHPAKQRGVT
Ga0134080_100339931	3300010333	Grasslands Soil	MGFRLKLREPLPNGLKRVFREQIESALQLCRHPAKQRGVT
Ga0134063_101669683	3300010335	Grasslands Soil	MGYCLKLREPLADGLKRIFCEESDAAVGLCRHPAKQRGVTVHEVRKHLKKLR
Ga0126370_105077523	3300010358	Tropical Forest Soil	MGFRLKLSEPLPDGLKRIFREQIDSALKLCRHPAKQRGVTVHEVRKHLK
Ga0126370_105666161	3300010358	Tropical Forest Soil	MGFRLKLREPLPEGLKRVFREEIDSALQLCHHPAKERGVTVHEVRKHLKK
Ga0126370_112156812	3300010358	Tropical Forest Soil	MAFRLKLREPLSEGLKRMFCEQVDSALHCCQNPAKQRGVTVHKVRKDLKKLRAAMRLAIAAVG
Ga0126376_116773012	3300010359	Tropical Forest Soil	MGFRLKLREPLPDGLKRVFREQIESALELCRHPAKQRGVTVHEVR
Ga0126372_104818443	3300010360	Tropical Forest Soil	MAFRLKLREPLPEGLKRVFCEQIDSALHCCQNPAKQRGVTVHEVRKHLKK
Ga0126378_103784291	3300010361	Tropical Forest Soil	MAFRLKLREPLPEGLKRVFCEQIDSALRLCQNPAKQRGVTVHEVRKHLKKLRA
Ga0126377_109071251	3300010362	Tropical Forest Soil	MAFRLKLREPLPDGLKRVFCEQIDSALRLCHNPAKQRGVTVHE
Ga0126377_116665371	3300010362	Tropical Forest Soil	MAFRLKLREPLPKGLKRVFSEQIDSALRLCQNPAKQRG
Ga0134128_105700563	3300010373	Terrestrial Soil	MAFCLKLREPLPKGLKRVFCEQIDAALHCCQHPAKQRGVTVHEVRKHLKKLRAAMRLAIGVVGKNCHAKEDRCVRK
Ga0134128_116643041	3300010373	Terrestrial Soil	MAFRLKLREPLPEGLKRVFCEQIDSALRLCQHPAKQR
Ga0126381_1024556112	3300010376	Tropical Forest Soil	MGFRLKLREPLPEGLKRVFHEEIDSALHMCQNPAKERGVTVHEVRKHLKKLR
Ga0134123_100559254	3300010403	Terrestrial Soil	MAFRLKLREPLSKGLKRVFCEQIDSALHCCQNPAKQ
Ga0105246_125645662	3300011119	Miscanthus Rhizosphere	MAFKLKLREPLSEGLKRVFSEQIESALHCCQHPAK
Ga0137364_101930554	3300012198	Vadose Zone Soil	MGFRLKLREPLPDGLKRVFCEQIHSALQLCRHPAKQRGVTVHEVR
Ga0137364_102307204	3300012198	Vadose Zone Soil	MGFRLKLREPVPDGLKRVFREQIDSALRLCQHPARQRGVTVHEVRKHL
Ga0137364_102507183	3300012198	Vadose Zone Soil	MGFKLKLREPLPDGLKRVFREQIESALEMCRHPAKQRGVTVHEVRKHLK
Ga0137364_106975141	3300012198	Vadose Zone Soil	MAFRLKLREPLPEGLKRVFCEQIDSGLHLCQNPAKQRGVTVHEVRKHLKRLRAAMRL
Ga0137383_101625494	3300012199	Vadose Zone Soil	MGFRLKLREPLSGGLKRVFREQIQSALELCRHPAKQRGVTVHEVRQHLRKLRAAMRLAVGEVVKNRHARDDRCAREIGRIKS
Ga0137383_107051432	3300012199	Vadose Zone Soil	MSFRLKLREPLPNGLKRIFREQIESALRLCRHPATRIVVTVHEVRKHLKNLSADSRLASAEVGKNRHTREDCCE
Ga0137382_103519391	3300012200	Vadose Zone Soil	MGYCLKLRERLSDGLTRIFQEEIDSAAGLCRHPAKQRGVTVHEVRKHLKKL
Ga0137363_104780353	3300012202	Vadose Zone Soil	MAFRLKLREPLPEGLKRVFCEQIDSALRLCQNPAKQRGVTVHEVRKHLK
Ga0137381_104350731	3300012207	Vadose Zone Soil	MGFRLKLREPLPDGLKRVFREQVQSALELCRHPAKQRG
Ga0137376_100993931	3300012208	Vadose Zone Soil	MGFRLKLREPLSGGLKRVFREQIQSALELCRHPAKQRGVTV
Ga0137379_103463144	3300012209	Vadose Zone Soil	MGFRLKLRDPLPEGLKRVFCEEIDSALQMCQHPAKERGVTVHE
Ga0137370_108525631	3300012285	Vadose Zone Soil	MAFRLKLRDPLPDDLKRVFSAQIDSALHLCQHPARERGVTVHEVRKH
Ga0137370_108770351	3300012285	Vadose Zone Soil	MGFRLKLRESLPDGLKRVFREQMQSALKLCRHPAKQRGVTVHE
Ga0137370_109085892	3300012285	Vadose Zone Soil	MGFRLKLREPLPDGLKRVFREQIQSALELCRHPAK
Ga0137386_104313571	3300012351	Vadose Zone Soil	MAFRLKLREPLPKGLKRVFCEQIDSALHMCQHPAKERGVTVHEVRKH
Ga0137386_112039631	3300012351	Vadose Zone Soil	MGFRLKLREPLPDGLKRVFREQVQSALKLCRHPAKQRGVTVHEVRKH
Ga0137366_103866583	3300012354	Vadose Zone Soil	MGYRLKLREPLADGLTRVFCEQIQSALELCRHPAKQRGVTVHEVRKYLKKLRAAMRLAVGEVGKNRHAHEDRCVR
Ga0137371_100421481	3300012356	Vadose Zone Soil	MGFKLKLREPLPDGLKRVFREQSESALQLCRHPAKQRGV
Ga0137371_111724262	3300012356	Vadose Zone Soil	MGYCLKLREPLANGLKRIFREESDAAVGLCRHPAKQRGVTVHEVRKHLKKLRAAL
Ga0137375_112905192	3300012360	Vadose Zone Soil	MGFRLKLREPLPDGLKRVFREQIVSALELCRHPAKERGITVHEVRK
Ga0137360_102423973	3300012361	Vadose Zone Soil	MGFRLKLREPLPDGLKRVFREEVESALQLCRHPAKE
Ga0157339_10483691	3300012505	Arabidopsis Rhizosphere	MAFRLKLREPLPEGLKRVFCEQIDAALHLCQNPAKQRGITVHE
Ga0137373_112634512	3300012532	Vadose Zone Soil	MGFRLKLREPLPDGLKRVFCEQLDSALRLCRHPAKQRGVTVH
Ga0157304_10543231	3300012882	Soil	MAFRLKLREPLPEGLKRVFCEQIDSALHCCQNPAKQRGVTVHEVRKHLKRLRAA
Ga0157292_101543572	3300012900	Soil	MGFKLKLREPLPDGLKRVFREQIESALELCRHPAKQRGVTVHEVRKHLKKL
Ga0157301_104401341	3300012911	Soil	MGFRLKLREPLPDGLKRVFREQIESALVLCRHPAKQRGVTVHEVRKHL
Ga0137394_104347393	3300012922	Vadose Zone Soil	MGFRLKLRESLPDGLKRVFREQIESALELCCHPAKQRGVTVHEVRKHLKK
Ga0137413_103139761	3300012924	Vadose Zone Soil	MGFRLKLREPLPDGLKRVFREQIESALKLCRNPARQR
Ga0126375_106640262	3300012948	Tropical Forest Soil	MAFRLKLREPLPDGLKRVFCEQIDSALRLCQNPAKQRGVTVHEVRKHLKKLRAAM
Ga0164298_100669504	3300012955	Soil	MAFRLKLREPLPEGLKRVFCEQIDSALRLCQHPAKQRGITVHEVRKHLKKLRAA
Ga0164303_115292832	3300012957	Soil	MAFRLKLREPLPEGLKRVFCEQIDCALHSCQHPAKQRGVTVHAVRK
Ga0164301_101539192	3300012960	Soil	MAFRLKLREPLPEGLKRVFCEQIDAALHCCENRVKQRGVTVHEVRKHLKRLRAAMRLA
Ga0126369_136356662	3300012971	Tropical Forest Soil	MAFRLKLREPLPKGLKRVFCEQIDSALHCCQNPAKQRGVTVHEVRKHLK
Ga0134087_102605222	3300012977	Grasslands Soil	MGFRLKLREPLPDGLKRVFCEQIESALKLCRHPAKQRGVTVHEVRKHLK
Ga0157371_104505061	3300013102	Corn Rhizosphere	MAFRLKLREPLPEGLKRVFCEQIDSALHLCQNPARQRGVTVHEVRKHLKKLR
Ga0157374_100341141	3300013296	Miscanthus Rhizosphere	MGFCLKLREPLSEGLKRVFCEQIDAALHLCRHPAKQRGVTVHEVRKHLKKL
Ga0157374_102453524	3300013296	Miscanthus Rhizosphere	MGFRLKLREPLPDGLKRVFLEQIESALELCRHPAKQRGVTVHEVRKHLKKL
Ga0157375_101156201	3300013308	Miscanthus Rhizosphere	MAFRLRLREPLSEGLKRVFCEQIDSALHCCQNPAKHRGVT
Ga0134075_101860571	3300014154	Grasslands Soil	MGFRLKLREPLPDGLKRVFREQAQSALELCQHPAKQRGVTVHEVRKHLKK
Ga0134075_102153241	3300014154	Grasslands Soil	MGFRLKLREPLPDGLKRVFCEQIESALKLCRHPAKQRGVTV
Ga0134078_100776064	3300014157	Grasslands Soil	VGFRLKLREPLSGGLKRVFREQIESALKLCRHPAKQRGVTVHE
Ga0157377_103997102	3300014745	Miscanthus Rhizosphere	MAFCLKLREPLPTGLKRVFCEQIDAALHCCQHPAKQRGVTVHEVRKHLKKL
Ga0157376_112039531	3300014969	Miscanthus Rhizosphere	MAFRLKLREPLPDGLKRVFCEQIDSALRLCQNPAKQRG
Ga0134089_105248101	3300015358	Grasslands Soil	MGFRLKLREPLPEALKRVFREQIDSALQLCRHPAKQRGVTVHEVRKHLKKLRAAMR
Ga0132255_1045168862	3300015374	Arabidopsis Rhizosphere	MAFCLKLREPLSQGLKRVFCEQIDAALHLCQHPAKQRGVPVHEVRKHLKKLRA
Ga0182035_118822022	3300016341	Soil	MGFRLTLRESLPDGLKRVFREQIESALKLCRNPSEQRGVTVHEVR
Ga0182034_110924621	3300016371	Soil	MAFRLKLREPLSEGLKRVFCEQIDSALRCCHNPAKQRGVTVHEVRKHLKKL
Ga0187825_100037911	3300017930	Freshwater Sediment	MGYRLKSGELPSDGLKRIFRQEIESALELCRHPAAERGLTVHEVRKHLKKL
Ga0187823_102022471	3300017993	Freshwater Sediment	MGYRLKSGELPSDGLKRIFRQEIEAALQLCRHPAAERGVTVHEVRKHLKK
Ga0184605_102330511	3300018027	Groundwater Sediment	MGYCLKLHEPLSKGLRRIFREEIESAVRLCRHPARQRGVTVHE
Ga0184617_10771991	3300018066	Groundwater Sediment	MGFRLKLREPLPDGLKRVFREQIDSALRLCRHPAKQRGVTVHEVRKHLKKL
Ga0184618_103086931	3300018071	Groundwater Sediment	MGFRLKLREPLPDALKRVFREQINSALQLCRHPAKQRGVTVHEVRKHLKKLRAA
Ga0184635_102587021	3300018072	Groundwater Sediment	MAFRLKLREPLPEGLKRVFCEQIDSALHLCQNPAKQRGVTVHEVRKH
Ga0184609_101427491	3300018076	Groundwater Sediment	MGFRLKLREPLPKGLKRVFCEEIDSALHMCQHPAKERGVTVHEVRKHLKK
Ga0184609_102219303	3300018076	Groundwater Sediment	MGFRLKLREPLPDGLKRVFCEQIDSALRLCRHPAKERGVTVHDVRKHLKKL
Ga0066667_101212684	3300018433	Grasslands Soil	MGFKLKLREPLPDGLKRVFREQIQSALELCWHPAKQRGVTVHEVRKHLKKLRAA
Ga0066667_105838883	3300018433	Grasslands Soil	MAFRLKSREPLPGGLKRVICEQVDSAVHFCQHAAKQRGVTVHEVGKHFKKVRASMRPAIGSS
Ga0066667_117174881	3300018433	Grasslands Soil	MGFRLKLRDPLPEGLKRVFCEEIDSALHMCQHPAKERGVTVHEVRKH
Ga0066667_122277342	3300018433	Grasslands Soil	MGFKLKLREPLPDGLKRVFREQSESALQLCRHPAKQRGVTVHEVRKHL
Ga0190269_106205391	3300018465	Soil	MGFRLKLREPLPDGLKRVFREQIDSALQLCRHPAKQRGITVHEVRKH
Ga0066662_108993651	3300018468	Grasslands Soil	MGFKLKLREPLPDGLKRVFREQIESALELCRHPAKQRGVTVHEVRKH
Ga0066662_121804291	3300018468	Grasslands Soil	MAFRLKLREPLPKGLKRVFCKEIDSALHMCQHPAKERGVTVHEVRKH
Ga0173479_102661502	3300019362	Soil	MAFRLKLREPLPEGLKRVFCEQIDSALHLCQNPAK
Ga0193703_10199503	3300019876	Soil	MGFRLKLREPLSDGLKRVFREQMESALELCRHPAKQRGVTVHEVRKH
Ga0193725_11154432	3300019883	Soil	MAFRLKLREPLPEGLKRVFCEQIDSALRLCQHPAKQRGVTVHAVRKHLKKLRAAMRLAIGAVG
Ga0193747_10981432	3300019885	Soil	MAFRLKLREPLPEGLKRVFREEIDSAFHMCQHPAKQRGVTVHEVRKHLKKLRA
Ga0193697_10998541	3300020005	Soil	MAFRLKLREPRPEGLKRVFCEQIDSALRLCQHPAKQRGITVHEVRKHLKKLRAAMRLAIGAVGKNC
Ga0193735_10175723	3300020006	Soil	MGFRLKLREPLPDGLKRVFREEVESALQLCRHPAKERGVTVHEVRKHLKNCAPQCALP
Ga0193721_11727012	3300020018	Soil	MGFRLKLREPLPDGLKRVFCEQLDSALRLCRHPAKERGVTVHEVRKHLKKLR
Ga0193733_11434162	3300020022	Soil	MGYCLKLPEPLSKGLKRIFREEIESAVRLCRHPARQRGLTVHEVRKHLKK
Ga0210378_104092701	3300021073	Groundwater Sediment	MAFRLKLREPLPEGLKRVFREEIDSAFHMCQHPAKE
Ga0193695_10899972	3300021418	Soil	MAFRLKLREPLPEGLKRVFREEIDSALRMCQHPAKERGVTVHEVRKHLKKL
Ga0193695_11116242	3300021418	Soil	MGFRLKLREPLPDGLKRVFREQIQSALELCRHPAKQ
Ga0126371_136998882	3300021560	Tropical Forest Soil	MAFCLKLREPLPEGLKRVFCEQIDSALHCCQNPAK
Ga0222622_100830463	3300022756	Groundwater Sediment	MAFRLKLREPLPEGLKRVFREEIDSAFHMCQHPAKERGVTV
Ga0247695_10558191	3300024179	Soil	MSYCLKLCEPLPRGLKRIFREQIQSALKLCRHPAKEPGVTVH
Ga0247668_11063512	3300024331	Soil	MAFRLKLREALPKGLKRVFCEQIDSALRCCQHPARQRGVTVHEVR
Ga0207653_101587532	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MAFRLKLREPLSKGLKRVFCEQIDSALHCCQNPAKQRGVTVHEVRKHLKKL
Ga0207710_107732732	3300025900	Switchgrass Rhizosphere	MAFCLKLREPLPKGLKRVFCEQIDAALHCCQHPAKQRGVTVHEVRKHLKKLRAAMRLAIGVVGKNCH
Ga0207684_105970423	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGFRLKLREPLPDGLKRVFREQVESALELCRHPARQRGV
Ga0207654_107253291	3300025911	Corn Rhizosphere	MAFCLKLREPLPTGLKRVFCEQIDAALHCCQHPAKQRGVTVHEVRKHLKKLRAAMRLAVGVVG
Ga0207693_101999381	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MGFRLKLREPLPDGLKRVFREQIESALELCRHPARQ
Ga0207693_114263761	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MGYCLKLREPLADGLKRIFREEVHSALELCRHPAKQRAVTVHEVRKHL
Ga0207649_107235791	3300025920	Corn Rhizosphere	MAFCLKLREPLSQGLKRVFCEQIDAALHLCQHPAKQRGVTVHEVRKHLKKLRAAMRLA
Ga0207650_114009282	3300025925	Switchgrass Rhizosphere	MAFKLKLREPLSEGLKRVFSEQIESALHCCQHPAKQRGVTVHEV
Ga0207687_100997965	3300025927	Miscanthus Rhizosphere	MGFRLKLREPLADGLKRVFREQIDAALRLCRHPAKQRG
Ga0207700_102854643	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAFCLKLREPLPTGLKRVFCEQIDAALHCCQHPAKQRGVTVHEVRKHLKKLR
Ga0207644_105313273	3300025931	Switchgrass Rhizosphere	MAFKLKLREPLSEGLKRVFSEQIESALHCCQHPANQRGVT
Ga0207669_118107171	3300025937	Miscanthus Rhizosphere	MAFRLKLREPLPEGLKRVFCEQIDSALHSCQNPAKQRG
Ga0207691_102088924	3300025940	Miscanthus Rhizosphere	MGFRLKLREPLADGLKRVFREQIDAALRLCRHPAKQRGVTVVD
Ga0207679_104613771	3300025945	Corn Rhizosphere	MAFRLKLREPLSKGLKRVFCEQIDSALHCCQNPAKQRGVTVHEI
Ga0207658_119157021	3300025986	Switchgrass Rhizosphere	MAFCLKLREPLSQGLKRVFCEQIDAALHLCQHPTKQRGVTVHEVRKHLKKLRAAMRLAVSGV
Ga0207677_120798772	3300026023	Miscanthus Rhizosphere	MAFRLKLREPLPEGLKRVFCEQIDSALRLCQHPAKQ
Ga0209238_10088866	3300026301	Grasslands Soil	MGFKLKLREPLPDGLKRVFREQSEFALQLCRHPAKQRGVTVHEVRKHLKKLRAAM
Ga0209155_11512333	3300026316	Soil	MGFKLKLREPLPDGLKRVFREQSESALQLCRHPAKQR
Ga0209266_12982252	3300026327	Soil	MGFRLKLREPLTGGLKRVFCEQIDSALHLCQHPAKQRGVTVHEV
Ga0209267_12137092	3300026331	Soil	MGFRLKLREPLTGGLKRVFCEQIDSALHLCQHPAKQR
Ga0209058_11852201	3300026536	Soil	MGYCLKLREPLADGLKRIFCEEIDAAVGLCRHPAKQRGV
Ga0209156_100163981	3300026547	Soil	MGFRLKLRESLPDGLKRVFREQIGSALKLCRHPARQRGVTVHEVRKHLK
Ga0209161_103181621	3300026548	Soil	MGYCLKVREPLADGLKRIFCEESDAAVGLCRHPAKQRGVTVHEV
Ga0209474_106923412	3300026550	Soil	MGFRLKLREPLPDGLKRVFCEQIESALKLCRHPAKQRGVTVH
Ga0209648_107506221	3300026551	Grasslands Soil	MAFRLKLREPLPEGLKRVFCEEIDSAFRMCQHPAKERGVTVHEVRKHLKKL
Ga0208575_10065553	3300026920	Soil	MGFRLKLREPLPDGLKRVFREQIECALELCRHPAKQRGITVHEVRKHLKKLRA
Ga0207486_10073861	3300026943	Soil	MSFCLKLREPLPQGLKRVFREQIDAALHCCQHPAKQRGVTVHEVRK
Ga0268266_107178942	3300028379	Switchgrass Rhizosphere	MAFCLKLREPLSQGLKRVFCEQIDAALHLCQHPAKQRGVTVHE
Ga0137415_101433654	3300028536	Vadose Zone Soil	MGFRLKLREPLSEGLKRVFREQIDSALHRCENPAKQRGVT
Ga0307283_100019297	3300028790	Soil	MAFRLKLREPLPEGLKRVFCEQIDSALHMCQNPAKQRGVTV
Ga0307290_100463113	3300028791	Soil	MAFRLKLREPLPEGLKRVFREEIDSALHMCQHPAKER
Ga0307287_102029611	3300028796	Soil	MGFRLKLREPLPDGLKRVFREQMESTLELCRHPAKQRGVTVHE
Ga0170822_154109831	3300031122	Forest Soil	MAFCLKLREPLPEGPKRVFCEQIDSALHWCQNPAKQR
Ga0170823_164938522	3300031128	Forest Soil	MGFRLRLREPLPDGLKRVFREQIESALELCRHPARQRGVTV
Ga0170820_159080533	3300031446	Forest Soil	MAFCLKLREPLPEGLKRVFCEQIDWALHSCQHPAKQRGVTVHEVRKHLKKLRAAMR
Ga0310813_123906812	3300031716	Soil	MGFCLKLREPLSEGLKRVFCEQIDAALHLCQHPAKQRGV
Ga0306918_103703521	3300031744	Soil	MAFRLRLREPLPKGLKRVFREQIDSALQLCQNPAQERGVT
Ga0310904_105476761	3300031854	Soil	MAFRLKLREPLPEGLKRVFCEQIDSALHLCQNPAKQRGVTVHEVRKHLKKLR
Ga0310904_110506892	3300031854	Soil	MAFCLKLREPLPKGLKRVFCEQSDAALQMCQSPAKQRGVTVHEVRKHLKKLRA
Ga0306923_117889001	3300031910	Soil	MAFRLKLREPLSEGLKRVFCEQIDSALHCCQNPAEQRGV
Ga0310901_103426861	3300031940	Soil	MAFCLKLREPLPKGLKRVFCEQSDAALHMCQSPAKQRGVTVHEVRKHLKKLRAAMRLAIGAVGKNCHAEEDR
Ga0310913_110676241	3300031945	Soil	MGFRLKLREPLPEGLKRVFREEIDSALQLCHNPAKER
Ga0310903_106216411	3300032000	Soil	MAFRLKLREPLPQGLKRVFCEQIHSALHLCQHPAKQRGVTV
Ga0310890_113753142	3300032075	Soil	MAFRLKLREPLPEGLKRVFCEQIDCALHSCQHPAKQRGVTVHEV
Ga0310895_100992753	3300032122	Soil	MAFRLKLREPLPQGLKRVFCEQIHSALHLCQHPAKQRGVTVHEV
Ga0310895_105213391	3300032122	Soil	MAFCLKLREPLPKGLKRVFCEQSDAALHMCQSPAKQRGVTVHEVRKHLKKLRAAMRLAIGAVGKNCHAEEDRCV
Ga0335079_122006082	3300032783	Soil	MGFRLKLREPLPAGLKRVFAEQIDAALQLCQHPAKQRGVTVHE
Ga0310810_109762701	3300033412	Soil	MAFKLKLREPLSEGLKRVFCEQIESALHCCQHPAKQR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F018633

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences