NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F018242

Metagenome / Metatranscriptome Family F018242

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F018242
Family Type Metagenome / Metatranscriptome
Number of Sequences 236
Average Sequence Length 63 residues
Representative Sequence MYRILCDRTPARELGSGLTWFMEDGKIVEFSTSEEAGAMVKTLSEGRRAATVKYTAKEFNLD
Number of Associated Samples 198
Number of Associated Scaffolds 236

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 80.08 %
% of genes near scaffold ends (potentially truncated) 27.97 %
% of genes from short scaffolds (< 2000 bps) 83.47 %
Associated GOLD sequencing projects 183
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (58.475 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.136 % of family members)
Environment Ontology (ENVO) Unclassified
(33.898 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(41.102 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.22%    β-sheet: 25.56%    Coil/Unstructured: 52.22%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
e.10.1.1: Prokaryotic type I DNA topoisomerased1mw9x_1mw90.6435
d.45.1.2: Adaptor protein ClpS (YljA)d3dnja_3dnj0.63417
d.58.8.1: Viral DNA-binding domaind6vh6a16vh60.61801
d.142.2.2: Adenylation domain of NAD+-dependent DNA ligased3jsla_3jsl0.59965
d.45.1.0: automated matchesd7d34a17d340.59771


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 236 Family Scaffolds
PF00076RRM_1 13.56
PF02423OCD_Mu_crystall 6.36
PF09084NMT1 5.93
PF10041DUF2277 3.39
PF00255GSHPx 2.54
PF13379NMT1_2 2.12
PF03972MmgE_PrpD 1.69
PF07978NIPSNAP 1.27
PF13946DUF4214 0.85
PF01977UbiD 0.85
PF00866Ring_hydroxyl_B 0.85
PF00004AAA 0.85
PF02776TPP_enzyme_N 0.85
PF02371Transposase_20 0.85
PF06114Peptidase_M78 0.42
PF12441CopG_antitoxin 0.42
PF13343SBP_bac_6 0.42
PF00857Isochorismatase 0.42
PF05973Gp49 0.42
PF08240ADH_N 0.42
PF07690MFS_1 0.42
PF03330DPBB_1 0.42
PF12974Phosphonate-bd 0.42
PF01548DEDD_Tnp_IS110 0.42
PF12276DUF3617 0.42
PF12840HTH_20 0.42
PF10387DUF2442 0.42
PF13751DDE_Tnp_1_6 0.42
PF04828GFA 0.42
PF05670NFACT-R_1 0.42
PF01408GFO_IDH_MocA 0.42
PF03372Exo_endo_phos 0.42
PF01075Glyco_transf_9 0.42
PF01850PIN 0.42
PF12728HTH_17 0.42
PF08327AHSA1 0.42
PF13776DUF4172 0.42
PF09949APP1_cat 0.42
PF01196Ribosomal_L17 0.42
PF067253D 0.42
PF0563523S_rRNA_IVP 0.42

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 236 Family Scaffolds
COG2423Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin familyAmino acid transport and metabolism [E] 6.36
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 5.93
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 5.93
COG0386Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxidesDefense mechanisms [V] 2.54
COG20792-methylcitrate dehydratase PrpDCarbohydrate transport and metabolism [G] 1.69
COG3547TransposaseMobilome: prophages, transposons [X] 1.27
COG00433-polyprenyl-4-hydroxybenzoate decarboxylaseCoenzyme transport and metabolism [H] 0.85
COG55173-phenylpropionate/cinnamic acid dioxygenase, small subunitSecondary metabolites biosynthesis, transport and catabolism [Q] 0.85
COG0203Ribosomal protein L17Translation, ribosomal structure and biogenesis [J] 0.42
COG0859ADP-heptose:LPS heptosyltransferaseCell wall/membrane/envelope biogenesis [M] 0.42
COG1293Ribosome quality control (RQC) protein RqcH, Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and RNA- (NFACT) binding domainsTranslation, ribosomal structure and biogenesis [J] 0.42
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 0.42
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.42
COG3657Putative component of the toxin-antitoxin plasmid stabilization moduleDefense mechanisms [V] 0.42
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.42
COG4679Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin systemDefense mechanisms [V] 0.42


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms58.90 %
UnclassifiedrootN/A41.10 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918013|NODE_658_length_1279_cov_8.100079All Organisms → cellular organisms → Bacteria1311Open in IMG/M
3300000559|F14TC_102051685Not Available1422Open in IMG/M
3300000881|JGI10215J12807_1378830Not Available609Open in IMG/M
3300000956|JGI10216J12902_100497052All Organisms → cellular organisms → Bacteria2478Open in IMG/M
3300000956|JGI10216J12902_101994545All Organisms → cellular organisms → Bacteria1224Open in IMG/M
3300003319|soilL2_10158525All Organisms → cellular organisms → Bacteria → Proteobacteria5492Open in IMG/M
3300003324|soilH2_10085364All Organisms → cellular organisms → Bacteria1076Open in IMG/M
3300003324|soilH2_10118119All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3061Open in IMG/M
3300003324|soilH2_10202775All Organisms → cellular organisms → Bacteria3338Open in IMG/M
3300003987|Ga0055471_10013887All Organisms → cellular organisms → Bacteria1812Open in IMG/M
3300003987|Ga0055471_10163949Not Available683Open in IMG/M
3300003987|Ga0055471_10204685Not Available617Open in IMG/M
3300003993|Ga0055468_10052096All Organisms → cellular organisms → Bacteria1043Open in IMG/M
3300003997|Ga0055466_10030172All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1244Open in IMG/M
3300004011|Ga0055460_10129849Not Available742Open in IMG/M
3300004015|Ga0055462_10153954All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300004114|Ga0062593_101858386All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300004114|Ga0062593_101896323Not Available658Open in IMG/M
3300004156|Ga0062589_101971617Not Available591Open in IMG/M
3300004156|Ga0062589_102243619All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300004463|Ga0063356_101068497All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1160Open in IMG/M
3300004463|Ga0063356_102365936Not Available812Open in IMG/M
3300004463|Ga0063356_103159068All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300004643|Ga0062591_100267922All Organisms → cellular organisms → Bacteria1318Open in IMG/M
3300004643|Ga0062591_102742698Not Available521Open in IMG/M
3300004778|Ga0062383_10493113Not Available613Open in IMG/M
3300004778|Ga0062383_10494949Not Available612Open in IMG/M
3300004779|Ga0062380_10107926All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300004780|Ga0062378_10197219Not Available558Open in IMG/M
3300004803|Ga0058862_12581906All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300005093|Ga0062594_100722997All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300005176|Ga0066679_10091431All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1835Open in IMG/M
3300005179|Ga0066684_10788455Not Available629Open in IMG/M
3300005180|Ga0066685_10389545Not Available968Open in IMG/M
3300005290|Ga0065712_10004464All Organisms → cellular organisms → Bacteria → Proteobacteria9316Open in IMG/M
3300005293|Ga0065715_10038129All Organisms → cellular organisms → Bacteria2064Open in IMG/M
3300005293|Ga0065715_10970833Not Available553Open in IMG/M
3300005294|Ga0065705_10106460All Organisms → cellular organisms → Bacteria6601Open in IMG/M
3300005327|Ga0070658_10102336All Organisms → cellular organisms → Bacteria2369Open in IMG/M
3300005331|Ga0070670_100043305All Organisms → cellular organisms → Bacteria3870Open in IMG/M
3300005331|Ga0070670_100470165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium1116Open in IMG/M
3300005331|Ga0070670_100472789All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300005331|Ga0070670_100963667Not Available775Open in IMG/M
3300005335|Ga0070666_10021774All Organisms → cellular organisms → Bacteria4155Open in IMG/M
3300005336|Ga0070680_100563711All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300005339|Ga0070660_100265556All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1402Open in IMG/M
3300005355|Ga0070671_101183430Not Available672Open in IMG/M
3300005355|Ga0070671_101724691All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300005366|Ga0070659_100009359All Organisms → cellular organisms → Bacteria7196Open in IMG/M
3300005434|Ga0070709_11306850All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium585Open in IMG/M
3300005441|Ga0070700_101400839Not Available591Open in IMG/M
3300005444|Ga0070694_101508172Not Available569Open in IMG/M
3300005455|Ga0070663_101517834Not Available596Open in IMG/M
3300005457|Ga0070662_101349914Not Available614Open in IMG/M
3300005457|Ga0070662_101499266Not Available581Open in IMG/M
3300005471|Ga0070698_100568127Not Available1074Open in IMG/M
3300005529|Ga0070741_10000565All Organisms → cellular organisms → Bacteria129459Open in IMG/M
3300005530|Ga0070679_100086161All Organisms → cellular organisms → Bacteria3128Open in IMG/M
3300005535|Ga0070684_101017220All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300005545|Ga0070695_100308870All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300005545|Ga0070695_100989138All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300005549|Ga0070704_100750550All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300005564|Ga0070664_100142045All Organisms → cellular organisms → Bacteria2114Open in IMG/M
3300005577|Ga0068857_100831977Not Available883Open in IMG/M
3300005617|Ga0068859_102962895Not Available519Open in IMG/M
3300005829|Ga0074479_11006186All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300005885|Ga0075284_1041732All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300006046|Ga0066652_100538274Not Available1091Open in IMG/M
3300006173|Ga0070716_100442687All Organisms → cellular organisms → Bacteria945Open in IMG/M
3300006755|Ga0079222_10669127All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300006797|Ga0066659_11700248Not Available532Open in IMG/M
3300006806|Ga0079220_10324344All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300006845|Ga0075421_101846511All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300006846|Ga0075430_100578410Not Available926Open in IMG/M
3300006847|Ga0075431_101625618Not Available604Open in IMG/M
3300006852|Ga0075433_10332286Not Available1344Open in IMG/M
3300006852|Ga0075433_10380019All Organisms → cellular organisms → Bacteria1247Open in IMG/M
3300006854|Ga0075425_100093669All Organisms → cellular organisms → Bacteria3408Open in IMG/M
3300006876|Ga0079217_10006610All Organisms → cellular organisms → Bacteria3516Open in IMG/M
3300006876|Ga0079217_11642197Not Available515Open in IMG/M
3300006918|Ga0079216_11006947Not Available644Open in IMG/M
3300006954|Ga0079219_10025535All Organisms → cellular organisms → Bacteria2258Open in IMG/M
3300006969|Ga0075419_10706748All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300006969|Ga0075419_11133623Not Available574Open in IMG/M
3300009053|Ga0105095_10282285Not Available912Open in IMG/M
3300009078|Ga0105106_10150027All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1712Open in IMG/M
3300009078|Ga0105106_10658349Not Available749Open in IMG/M
3300009087|Ga0105107_10562854Not Available794Open in IMG/M
3300009147|Ga0114129_11155277All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300009156|Ga0111538_11807617Not Available769Open in IMG/M
3300009156|Ga0111538_12193175Not Available694Open in IMG/M
3300009157|Ga0105092_10511919Not Available689Open in IMG/M
3300009162|Ga0075423_10047795All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium4398Open in IMG/M
3300009162|Ga0075423_10324345All Organisms → cellular organisms → Bacteria1615Open in IMG/M
3300009177|Ga0105248_13080451Not Available531Open in IMG/M
3300009551|Ga0105238_10412428All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1344Open in IMG/M
3300009553|Ga0105249_10235287All Organisms → cellular organisms → Bacteria1808Open in IMG/M
3300009610|Ga0105340_1042176All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1778Open in IMG/M
3300010044|Ga0126310_11775180All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium514Open in IMG/M
3300010397|Ga0134124_11720919Not Available660Open in IMG/M
3300010399|Ga0134127_10057909All Organisms → cellular organisms → Bacteria3234Open in IMG/M
3300010399|Ga0134127_11235019All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300010400|Ga0134122_13307588Not Available506Open in IMG/M
3300011400|Ga0137312_1007701All Organisms → cellular organisms → Bacteria1280Open in IMG/M
3300011414|Ga0137442_1125473Not Available566Open in IMG/M
3300011420|Ga0137314_1056762All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Lampropedia → Lampropedia hyalina → Lampropedia hyalina DSM 16112948Open in IMG/M
3300011425|Ga0137441_1145946Not Available587Open in IMG/M
3300011431|Ga0137438_1172477All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300011442|Ga0137437_1334883Not Available513Open in IMG/M
3300011445|Ga0137427_10447928Not Available533Open in IMG/M
3300012166|Ga0137350_1079098Not Available661Open in IMG/M
3300012198|Ga0137364_10321357Not Available1151Open in IMG/M
3300012200|Ga0137382_10375551All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300012211|Ga0137377_10546704All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1096Open in IMG/M
3300012226|Ga0137447_1020337All Organisms → cellular organisms → Bacteria1014Open in IMG/M
3300012231|Ga0137465_1060388Not Available1125Open in IMG/M
3300012285|Ga0137370_10104631All Organisms → cellular organisms → Bacteria1597Open in IMG/M
3300012476|Ga0157344_1008453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium706Open in IMG/M
3300012899|Ga0157299_10331216Not Available515Open in IMG/M
3300012904|Ga0157282_10095199All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium824Open in IMG/M
3300012922|Ga0137394_10034498All Organisms → cellular organisms → Bacteria → Proteobacteria4127Open in IMG/M
3300012931|Ga0153915_10071177All Organisms → cellular organisms → Bacteria → Proteobacteria3620Open in IMG/M
3300012987|Ga0164307_10321950All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium1111Open in IMG/M
3300013096|Ga0157307_1058575Not Available738Open in IMG/M
3300013297|Ga0157378_10557012All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300014254|Ga0075312_1033588All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300014268|Ga0075309_1150374Not Available594Open in IMG/M
3300014307|Ga0075304_1131888Not Available589Open in IMG/M
3300014311|Ga0075322_1069479All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300014326|Ga0157380_12909044All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales545Open in IMG/M
3300014745|Ga0157377_10153644Not Available1425Open in IMG/M
3300014969|Ga0157376_12601377Not Available546Open in IMG/M
3300015077|Ga0173483_10298751All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium787Open in IMG/M
3300015200|Ga0173480_10859864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium585Open in IMG/M
3300015253|Ga0180081_1043754All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300015371|Ga0132258_13919094All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron → unclassified Candidatus Kentron → Candidatus Kentron sp. LPFa1011Open in IMG/M
3300015372|Ga0132256_102568985All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium610Open in IMG/M
3300015374|Ga0132255_104393126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium598Open in IMG/M
3300017930|Ga0187825_10055101All Organisms → cellular organisms → Bacteria1349Open in IMG/M
3300017997|Ga0184610_1014375All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2046Open in IMG/M
3300018000|Ga0184604_10354247Not Available522Open in IMG/M
3300018054|Ga0184621_10008255All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2939Open in IMG/M
3300018056|Ga0184623_10516917Not Available507Open in IMG/M
3300018063|Ga0184637_10147644All Organisms → cellular organisms → Bacteria1451Open in IMG/M
3300018071|Ga0184618_10235090Not Available773Open in IMG/M
3300018074|Ga0184640_10155775Not Available1020Open in IMG/M
3300018074|Ga0184640_10213224All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12873Open in IMG/M
3300018077|Ga0184633_10056857All Organisms → cellular organisms → Bacteria1995Open in IMG/M
3300018422|Ga0190265_10182971All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2088Open in IMG/M
3300018422|Ga0190265_10721064All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300018432|Ga0190275_13335461Not Available520Open in IMG/M
3300018433|Ga0066667_10234326All Organisms → cellular organisms → Bacteria1378Open in IMG/M
3300018465|Ga0190269_11995290Not Available505Open in IMG/M
3300018469|Ga0190270_10009090All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales5503Open in IMG/M
3300018476|Ga0190274_12452057Not Available619Open in IMG/M
3300018476|Ga0190274_13512051Not Available529Open in IMG/M
3300018482|Ga0066669_10644637All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria931Open in IMG/M
3300019228|Ga0180119_1271680Not Available678Open in IMG/M
3300019263|Ga0184647_1221474Not Available579Open in IMG/M
3300019356|Ga0173481_10189096All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300019361|Ga0173482_10146687Not Available914Open in IMG/M
3300019362|Ga0173479_10129158All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300019362|Ga0173479_10131939Not Available973Open in IMG/M
3300019889|Ga0193743_1007754All Organisms → cellular organisms → Bacteria6411Open in IMG/M
3300020003|Ga0193739_1127311All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium628Open in IMG/M
3300020022|Ga0193733_1108656All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria772Open in IMG/M
3300020060|Ga0193717_1047039All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1552Open in IMG/M
3300020193|Ga0194131_10001651All Organisms → cellular organisms → Bacteria38003Open in IMG/M
3300021090|Ga0210377_10484257Not Available718Open in IMG/M
3300021445|Ga0182009_10832984Not Available506Open in IMG/M
3300022214|Ga0224505_10022148All Organisms → cellular organisms → Bacteria2847Open in IMG/M
3300022898|Ga0247745_1059042All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales617Open in IMG/M
3300024056|Ga0124853_1342168All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2318Open in IMG/M
3300025315|Ga0207697_10015883All Organisms → cellular organisms → Bacteria → Proteobacteria3106Open in IMG/M
3300025315|Ga0207697_10133065All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1075Open in IMG/M
3300025537|Ga0210061_1010272All Organisms → cellular organisms → Bacteria1490Open in IMG/M
3300025559|Ga0210087_1000926All Organisms → cellular organisms → Bacteria6460Open in IMG/M
3300025795|Ga0210114_1022982All Organisms → cellular organisms → Bacteria1333Open in IMG/M
3300025901|Ga0207688_10087732All Organisms → cellular organisms → Bacteria1783Open in IMG/M
3300025903|Ga0207680_10074148All Organisms → cellular organisms → Bacteria2118Open in IMG/M
3300025903|Ga0207680_10474130All Organisms → cellular organisms → Bacteria → Proteobacteria890Open in IMG/M
3300025911|Ga0207654_10571659Not Available805Open in IMG/M
3300025912|Ga0207707_10010587All Organisms → cellular organisms → Bacteria8010Open in IMG/M
3300025915|Ga0207693_10341728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium1171Open in IMG/M
3300025924|Ga0207694_10540591Not Available977Open in IMG/M
3300025925|Ga0207650_11634018Not Available547Open in IMG/M
3300025933|Ga0207706_11256060All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300025938|Ga0207704_10962161Not Available721Open in IMG/M
3300025942|Ga0207689_10328591All Organisms → cellular organisms → Bacteria1270Open in IMG/M
3300025945|Ga0207679_11122807All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium721Open in IMG/M
3300025961|Ga0207712_11464391Not Available611Open in IMG/M
3300026029|Ga0208002_1001775All Organisms → cellular organisms → Bacteria2012Open in IMG/M
3300026029|Ga0208002_1028322Not Available547Open in IMG/M
3300026035|Ga0207703_10446669All Organisms → cellular organisms → Bacteria → Proteobacteria1207Open in IMG/M
3300026051|Ga0208911_1012424Not Available792Open in IMG/M
3300026095|Ga0207676_10869972Not Available882Open in IMG/M
3300026116|Ga0207674_10602734All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300026116|Ga0207674_11727714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium594Open in IMG/M
3300026118|Ga0207675_101068402Not Available826Open in IMG/M
3300026285|Ga0209438_1068034All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1165Open in IMG/M
3300026320|Ga0209131_1090695All Organisms → cellular organisms → Bacteria1629Open in IMG/M
3300026535|Ga0256867_10035348All Organisms → cellular organisms → Bacteria → Proteobacteria2075Open in IMG/M
3300027617|Ga0210002_1072413Not Available609Open in IMG/M
3300027637|Ga0209818_1003478All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3039Open in IMG/M
3300027665|Ga0209983_1141757Not Available550Open in IMG/M
3300027682|Ga0209971_1016598All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1745Open in IMG/M
3300027725|Ga0209178_1165063Not Available771Open in IMG/M
3300027731|Ga0209592_1146219Not Available849Open in IMG/M
3300027735|Ga0209261_10166520Not Available588Open in IMG/M
3300027778|Ga0209464_10254051Not Available635Open in IMG/M
3300027815|Ga0209726_10153355All Organisms → cellular organisms → Bacteria1282Open in IMG/M
3300027818|Ga0209706_10368046Not Available672Open in IMG/M
3300027840|Ga0209683_10025883All Organisms → cellular organisms → Bacteria2473Open in IMG/M
3300027877|Ga0209293_10668302Not Available550Open in IMG/M
3300027909|Ga0209382_10611754All Organisms → cellular organisms → Bacteria1184Open in IMG/M
3300027909|Ga0209382_11142821Not Available801Open in IMG/M
3300030606|Ga0299906_10829922Not Available686Open in IMG/M
(restricted) 3300031150|Ga0255311_1077169All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300031226|Ga0307497_10124764All Organisms → cellular organisms → Bacteria1037Open in IMG/M
3300031229|Ga0299913_10223880All Organisms → cellular organisms → Bacteria1863Open in IMG/M
3300031538|Ga0310888_11014074Not Available522Open in IMG/M
3300031562|Ga0310886_11078280Not Available518Open in IMG/M
3300031716|Ga0310813_10035596All Organisms → cellular organisms → Bacteria3559Open in IMG/M
3300031716|Ga0310813_10172083Not Available1758Open in IMG/M
3300032005|Ga0307411_11928800All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium fosmid pJB190D12_contig II550Open in IMG/M
3300032122|Ga0310895_10682805Not Available533Open in IMG/M
3300032144|Ga0315910_10060675All Organisms → cellular organisms → Bacteria2751Open in IMG/M
3300032144|Ga0315910_11612630All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Spiribacter → unclassified Spiribacter → Spiribacter sp. C176506Open in IMG/M
3300032157|Ga0315912_10447720Not Available1025Open in IMG/M
3300032157|Ga0315912_11413589Not Available549Open in IMG/M
3300032205|Ga0307472_101393103Not Available680Open in IMG/M
3300032211|Ga0310896_10273208All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300033412|Ga0310810_11077386Not Available673Open in IMG/M
3300033433|Ga0326726_10412500All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira1282Open in IMG/M
3300033486|Ga0316624_10164501All Organisms → cellular organisms → Bacteria1673Open in IMG/M
3300033486|Ga0316624_12145825Not Available519Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.14%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.36%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil5.08%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.24%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.24%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.39%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.97%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment2.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.97%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.97%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.54%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.12%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.69%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.69%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.69%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.27%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.27%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.27%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.27%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.85%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.42%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.42%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.42%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.42%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.42%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.42%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.42%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.42%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.42%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.42%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.42%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.42%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.42%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.42%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.42%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.42%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.42%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.42%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.42%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.42%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918013Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)EnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000881Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300004011Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004015Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3FreshEnvironmentalOpen in IMG/M
3300004779Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3FreshEnvironmentalOpen in IMG/M
3300004780Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1FreshEnvironmentalOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300005885Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011400Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2EnvironmentalOpen in IMG/M
3300011414Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2EnvironmentalOpen in IMG/M
3300011420Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2EnvironmentalOpen in IMG/M
3300011425Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2EnvironmentalOpen in IMG/M
3300011431Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012166Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012226Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2EnvironmentalOpen in IMG/M
3300012231Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2EnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012476Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610Host-AssociatedOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014254Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2EnvironmentalOpen in IMG/M
3300014268Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1EnvironmentalOpen in IMG/M
3300014307Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D1EnvironmentalOpen in IMG/M
3300014311Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015253Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019228Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019263Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019889Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020060Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2EnvironmentalOpen in IMG/M
3300020193Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120mEnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022214Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300022898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5EnvironmentalOpen in IMG/M
3300024056Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025537Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025559Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025795Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026029Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026051Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026535Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)EnvironmentalOpen in IMG/M
3300027617Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027665Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027682Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027731Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027735Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027877Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300030606Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Iowa-Corn-GraphCirc_020893702140918013SoilMPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNAAKTLSTSTVTYTAKEIKIY
F14TC_10205168523300000559SoilMYRILCDRTPARELGSGLTWFMEDSKIVEFSTPEEAGAKVKTLSVERRAATVKYTVKEFNLD*
JGI10215J12807_137883013300000881SoilMYRVLCDRMPARELGSGLTWFMRDGRVVEFATTEEAGAMVKELTDRRNAAKTLTTSTVTYTAKEIKIY*
JGI10216J12902_10049705213300000956SoilTPARELGSGLTWFMQDGRVVEFATTEEVGAMVKELTDRRNRTKTLSTSTVTYTAKEIKIY
JGI10216J12902_10199454523300000956SoilMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAGAMVKKLTEARRAATASTVTYTAKKYNFDD*
soilL2_1015852573300003319Sugarcane Root And Bulk SoilMYRILCDRQPARELGSGLFWLTENGKIVEFSTTEEAGAMVKKLREGPRAASVTYTAKEYKPED*
soilH2_1008536423300003324Sugarcane Root And Bulk SoilMYRILCDRQPARELGSGLFWLTENGKIVEFSTSEEAGAMVKKLSEGPRAASVTYTAKEFNPDDY*
soilH2_1011811933300003324Sugarcane Root And Bulk SoilMYRILCDRQPARELGSGLFWFTEGSKIVEFATIEEAGAMVKKLSEGTRAATVKYTVKEYKTDD*
soilH2_1020277523300003324Sugarcane Root And Bulk SoilMYRILCDRQPARELGSGLFWLTENGKIVEFATTEEAGAMVKKLREGPRAASVTYTAKEYKPED*
Ga0055471_1001388733300003987Natural And Restored WetlandsMYRILCDRSPARELGSGLTWFNVDGKIVEFATTEEAAAMVKKLSEGPRAAMVKYTAKEFNPE*
Ga0055471_1016394913300003987Natural And Restored WetlandsMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAGAMVKTLSEGRRAATVKYTAKEFKLE*
Ga0055471_1020468523300003987Natural And Restored WetlandsMYRILCDRSPARELGAGLTWFNEDGKIIEFATAEEAGAMAKKLSESPRAANVKYTAKEFNLD*
Ga0055468_1005209613300003993Natural And Restored WetlandsMYRILCDRSPARELGSGLTWFNVDGKIVEFATTEEAAAMVKKLSEGPRAAMVK
Ga0055466_1003017223300003997Natural And Restored WetlandsMYRILCDRTPARELGSGLTWFMEDGKIVEFSTLEEAGAMVKTLSEGPRAATVKYTAKEFNPE*
Ga0055460_1012984923300004011Natural And Restored WetlandsMYRILCDRTPARELGSGLTWFMQDGRIVEFATTEEAGAMAKELTDRRNLAKTLSTSTVTYTAKEIKIY*
Ga0055462_1015395423300004015Natural And Restored WetlandsMYRILCDRSPARELGSGLTWLKKDGKIVEFATTEAAGAMVLELSKGRSAATVKYSAKPYNTDNAD*
Ga0062593_10185838623300004114SoilARELGSGLTWLMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKQYNPE*
Ga0062593_10189632313300004114SoilPARELGSGLTWFNVDGKIVEFATTEEAAAMVKKLSEGPRAAMVKYTAKEFNPE*
Ga0062589_10197161713300004156SoilMYRVLCDRMPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNAAKTLSTSTVTYTAKEIKIY*
Ga0062589_10224361913300004156SoilLYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVTYTAKQFNPDG*
Ga0063356_10106849713300004463Arabidopsis Thaliana RhizosphereMYRILCDRTPARELGSGLTWFMEDSKIVEFATLEEAGAMVKTLSEGRRAATVKYTAKEINLD*
Ga0063356_10236593613300004463Arabidopsis Thaliana RhizosphereMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAGAMVKTLSEGPRAATVKYTAKEFNLD*
Ga0063356_10315906823300004463Arabidopsis Thaliana RhizosphereMYRILCDRTPARELGSGLTWYRKDGKVVEFATTEEAGVMVKELSAGRSAATVKYTAK
Ga0062591_10026792223300004643SoilMYRILCDRQPARELGSGLTWLMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKQYNPE*
Ga0062591_10274269813300004643SoilMYRVLCDRMPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNATKSLST
Ga0062383_1049311313300004778Wetland SedimentMYRILCDRMPARELGSGLTWFMKDGRVVEFATTEEAGVMVKELTDRRSAAKTMSTSTVTYSAKEVKVY*
Ga0062383_1049494913300004778Wetland SedimentMYRILCDRMPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRSAVKTMSTSTITYTAKEVKVY*
Ga0062380_1010792623300004779Wetland SedimentMYRILCDRMPARELGSGLTWFMKDGRVVEFATTEEAGVMVKELTERRSAVKTMSASTITYTAKEFKIY*
Ga0062378_1019721923300004780Wetland SedimentMYRILCDRMPARELGSGLTWFMKDGRVVEFATTEEAGVMVKELTDRRSAAKTMSTSTVTYSAK
Ga0058862_1258190623300004803Host-AssociatedMYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVTYTAKQFNPDG*
Ga0062594_10072299723300005093SoilMYRILCDRQPARELGSGLFWLTENGKIVEFATTEEAGAMVKKLSEGPRAASVTYTAKKFNPDDY*
Ga0066679_1009143123300005176SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTSEEAGAMVKTLSEEPRAATVKYTAKEFNLE*
Ga0066684_1078845513300005179SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAEAMVKTLSEGPRAATVKYTAKEFNIG*
Ga0066685_1038954513300005180SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTAEEAEAMAKTLSKGPRAATVKYTAKEFNIG*
Ga0065712_1000446493300005290Miscanthus RhizosphereMYRILCDRQPARELGSGLTWFMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKKYNPDD*
Ga0065715_1003812923300005293Miscanthus RhizosphereMYRILXDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVTYTAKQYNADD*
Ga0065715_1097083313300005293Miscanthus RhizosphereMYRILCDRTPARELGSGLTWFKEDGKIVEFSTPEEAGVVVKKLSEGRRAATTKYTAKEFNLD*
Ga0065705_1010646073300005294Switchgrass RhizosphereMYRILCDRTPARELGSGLTWFMEDSKIVEFATLEEAGAMVKTLSEGRRAATVKYTAKEFKLD*
Ga0070658_1010233613300005327Corn RhizosphereLYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVTYTAKKYNADD*
Ga0070670_10004330513300005331Switchgrass RhizosphereRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVTYTAKQYNADD*
Ga0070670_10047016523300005331Switchgrass RhizosphereMYRILCDRTPARELGSGLTWFMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKKYNPDD*
Ga0070670_10047278933300005331Switchgrass RhizosphereFHMYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVTYTAKQFNPDG*
Ga0070670_10096366713300005331Switchgrass RhizosphereMYRVLCDRTPARELGSGLTWFMQDGRVVEFATTEEVGAMVKELTDRRNRTKTLSTSTVTYTAKEVKIY*
Ga0070666_1002177463300005335Switchgrass RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVTYTAKQYNADD*
Ga0070680_10056371113300005336Corn RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVTYTAKQY
Ga0070660_10026555613300005339Corn RhizosphereYRILCDRQPARELGSGLTWLMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKKYNPDD*
Ga0070671_10118343023300005355Switchgrass RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVTYTAKKYNADD*
Ga0070671_10172469113300005355Switchgrass RhizosphereMYRILCDRTPARELGSGLTWFKENGKILEFSTLKDAGVKVKELSEHPRAANVKYSAERYETD
Ga0070659_10000935943300005366Corn RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVMYTAKKYNADD*
Ga0070709_1130685023300005434Corn, Switchgrass And Miscanthus RhizosphereMYRILCDRQPARELGSGLTWLMENGKIVEFATTEEAGAMVKKLSEGPRASTVTYTAKQYNPE*
Ga0070700_10140083913300005441Corn, Switchgrass And Miscanthus RhizosphereARELGSGLTWFRKDGKVVEFATTEEAGVMVKELSEGRSAATVKYTAKEFKFE*
Ga0070694_10150817223300005444Corn, Switchgrass And Miscanthus RhizosphereMYRILCDRQPARELGSGLFWLTENGKIVEFATTEEAGAMVKKLSEGPRAASVTYTAKEFNPDD*
Ga0070663_10151783423300005455Corn RhizosphereMYRILCDRQPARELGSGLTWLMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKKYNPDD*
Ga0070662_10134991413300005457Corn RhizosphereMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAGAMVKTLSEGPRAATVKYTAKEFKIE*
Ga0070662_10149926623300005457Corn RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRATTGSTVTYTAKKYNADD*
Ga0070698_10056812723300005471Corn, Switchgrass And Miscanthus RhizosphereMYRILCDRTPARELGSGLTWFMEDSKIVEFATLEEAGAMVKTLSEGRRAATVKYTAKEFNLD*
Ga0070741_100005651073300005529Surface SoilMYRILCDRQPARELGSGLFWLTENGKIVEFSTTEEAGAMVKKLSEGPRSASVTYTAKEYNPED*
Ga0070679_10008616123300005530Corn RhizosphereMYRILCDRQPARELGSGLFWLTENGKIVEFATTEEAGAMVRKLSEGPRAASVTYTAKEFNPDD*
Ga0070684_10101722023300005535Corn RhizosphereLYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVTYTAKQYNADD*
Ga0070695_10030887013300005545Corn, Switchgrass And Miscanthus RhizosphereMYRILCDRTPARELGSGLTWFKEDGKIVEFSTLEEAGVVVKKLSEGRRAATTKYTAKEFNLD*
Ga0070695_10098913823300005545Corn, Switchgrass And Miscanthus RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLIEGRRATTGSTVTYTAKKYNADD*
Ga0070704_10075055013300005549Corn, Switchgrass And Miscanthus RhizosphereYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVTYTAKKYNADD*
Ga0070664_10014204533300005564Corn RhizosphereYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVTYTAKQFNPDG*
Ga0068857_10083197713300005577Corn RhizosphereMYRVLCDRMPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNAAKTLSTSTVTYTAKEVKIY*
Ga0068859_10296289523300005617Switchgrass RhizosphereMYRILCDRTPARELGSGLTWFKENGKILEFSTLKDAGVKVKELSEHPRAANVKYSAERYETD*
Ga0074479_1100618623300005829Sediment (Intertidal)MYRILCDRTPARELGSGLTWFKEGGKVVEFATTEEAGAMVKKLSAGPKAATVKYTAKEFNPE*
Ga0075284_104173223300005885Rice Paddy SoilMYRILCDRSPARELGSGLTWFNVDGKIVEFATTEEAGAMVKKLSEGPRAAMVKYTAKEFNPE*
Ga0066652_10053827423300006046SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTSEEAGAMVKTLSEGPRAATVKYTAKEFNLE*
Ga0070716_10044268723300006173Corn, Switchgrass And Miscanthus RhizosphereMYRILCDRQPARELGSGLTWFMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKQYNPE*
Ga0079222_1066912713300006755Agricultural SoilEVSLYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVTYTAKQFNPDG*
Ga0066659_1170024823300006797SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAGAMVKTLSEGPRAATVKYTAKEFNLE*
Ga0079220_1032434413300006806Agricultural SoilRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVTYTAKKYNADD*
Ga0075421_10184651113300006845Populus RhizosphereMYRILCDRTPARELGSGLTWFRKDGKVVEFATTEEAGVMVKELSEGRNAATVKYTAKEFKFE*
Ga0075430_10057841023300006846Populus RhizosphereMYRILCDRTPARELGSGLTWYRKDGKVVEFATTEEAGVMVKELSAGRSAATVKYTAKEFNIE*
Ga0075431_10162561823300006847Populus RhizosphereMYRILCDRTPARELGSGLTWYRKDGKVVEFATTEEAGVVVKELSAGRSAATVKYTAKEFNVE*
Ga0075433_1033228633300006852Populus RhizosphereMYRILCDRTPARELGSGLTWFMEDGKIVEFSTSEEAGAMVKTLSEGPRAATVK
Ga0075433_1038001933300006852Populus RhizosphereMYRILCDRTPARELGSGLTWFRKDGKVVEFATTEEAGVMVKELSEGRNAATVKYTAKEF
Ga0075425_10009366923300006854Populus RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAGAMVKKLTEARRAATGATVTYTAKKYNADD*
Ga0079217_1000661033300006876Agricultural SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTLEEAGAMVKTLSEGPRAATVKYTAKEFNLE*
Ga0079217_1164219713300006876Agricultural SoilMFRILCDRQPARELGSGLTWFMEDGKIVEFSTSEEAGAMVKKLSEGPRAAMTTYTAREYNPED*
Ga0079216_1100694713300006918Agricultural SoilMYRILCDRTPARELGPGLTWFMEDGKIVEFSTPEEAGAMVKTLSEGRRAATVKYTAKEFNRD*
Ga0079219_1002553523300006954Agricultural SoilLYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRAATASTVTYTAKQFNPDG*
Ga0075419_1070674823300006969Populus RhizosphereLCDRQPARELGSGLTWLKEDGKIVEFSTTEEAGAMVKKLTEARRAATASTVTYTAKKYNFDD*
Ga0075419_1113362313300006969Populus RhizosphereMYRILCDRTPARELGSGLTGLSKDCKVVEFATTEEAGVMVKELSAGRSAATVKYTAKEFNVE*
Ga0105095_1028228523300009053Freshwater SedimentMYRILCDRSPARELGSGLTWFKEDGKIVEFSTTEEAEVMVKKLSEGRRAATVKYTAKEFNLD*
Ga0105106_1015002723300009078Freshwater SedimentMYRILCDRSPARELGSGLTWFKEDGKIVEFSTTEEAEVMVKKLSEGRRAATVKYTAKEYST*
Ga0105106_1065834913300009078Freshwater SedimentMYRVLCDRIPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNATKTLTTSTVTYTAKEIKIY*
Ga0105107_1056285413300009087Freshwater SedimentMYRVLCDRIPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNAAKTLSTSTVTYTAKEIKIY*
Ga0114129_1115527723300009147Populus RhizosphereMYRILCDRTPARELGSGLTWFRKDGKIVEFATTEEAGVMVKELSQGRNAATVKYTAKEFNIE*
Ga0111538_1180761713300009156Populus RhizosphereMYRVLCDRTPARELGSGLTWFRKDGKVVEFATTEEAGVMVKELSEGRNAATVKYTAKEFKFE*
Ga0111538_1219317523300009156Populus RhizosphereMFSTRRFHMYRILCDRTPARELGSGLTWFRKDGKVVEFATTEEAGVMVKELSEGRNADTVKYTAKEFKFE*
Ga0105092_1051191923300009157Freshwater SedimentMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAGAMVETLSKGPRAKTVKYTAKEFKLE*
Ga0075423_1004779533300009162Populus RhizosphereLCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVTYTAKQFNPDG*
Ga0075423_1032434513300009162Populus RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAGAMVKKLTEARRGATASTVTYTAKKYNFDD*
Ga0105248_1308045113300009177Switchgrass RhizosphereMYRILCDRQPARELGSGLTWLKEDGNIVEFSTTEEAAAMVKKLTEGRRATTGSTVTYTAKQYNADD*
Ga0105238_1041242823300009551Corn RhizosphereLYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVMYTAKKYNADD*
Ga0105249_1023528723300009553Switchgrass RhizosphereMYRILCDRTPARELGSGLTWFRKDGKVVEFATTEEAGVMVKELSEGRSAATVKYTAKEFKFE*
Ga0105340_104217633300009610SoilLCDRTPARELGSGLTWYRKDGKVVEFATTEEAGVMVEELSAGRSAATVKYTAKEFNIE*
Ga0126310_1177518013300010044Serpentine SoilMYRILCDRSPARELGSGLTWLKKDGKIVEYSTTEEAGAKAKELNEGATARTTTSNVTY
Ga0134124_1172091913300010397Terrestrial SoilRTPARELGSGLTWFMEDSKIVEFATLEEAGAMVKTLSEGRRAATVKYTAKEFKLD*
Ga0134127_1005790923300010399Terrestrial SoilMYRILCDRTPARELGSGLTWFKEDGKIVEFTTPEEAGVVVKKLSEGRRAATTKYTAKEFNLD*
Ga0134127_1123501923300010399Terrestrial SoilMYRILCDRTPARELGSGLTWFRKDGKVVEFATTEEAGVMVKELSEGRNAATVKYT
Ga0134122_1330758813300010400Terrestrial SoilLCDRTPARELGSGLTWFMEDSKIVEFSTLEEAGAMVKTLSEGRRAATVKYTAKEFKLD*
Ga0137312_100770113300011400SoilMYRILCDRTPARELGSGLTWYRKDGKVVEFATTEEAGVMVKELSAGRSAATVKYTAKEFNLD*
Ga0137442_112547323300011414SoilMYRILCDRTPARELGSGLTWFKKDGRIVEFATTEEAGAMVTELTELRSAARATATSTVKYVAKEFNAE*
Ga0137314_105676223300011420SoilMPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNATKTLSTSTVTYTAKEIKIY
Ga0137441_114594623300011425SoilMYRILCDRTPARELGSGLTWFKKNGHIVEFATTEEAGVIVKELSEGRSAATVKYTAKEFKVE*
Ga0137438_117247723300011431SoilMYRILCDRTPARELGSGLTWFKKDGHIVEFATTEEAGAMVTELTELRSAARATATSTVKYVAKEFNAE*
Ga0137437_133488313300011442SoilMPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNRTKTLTTSTAKEIKIS*
Ga0137427_1044792813300011445SoilNLSNPSSVGRTVVFRRFHMYRILCDRTPARELGSGLTWYRKDGKVVEFATTEEAGVMVKELSAGRSAATVKYTAKEFNIE*
Ga0137350_107909823300012166SoilMPARELGSGLTWFMRDGRVVEFATTEEAGAMVKELTDRRNAAKTLTTSTVTYT
Ga0137364_1032135733300012198Vadose Zone SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAEAMAKTLSKGPRAATVKYTAKEFNIG*
Ga0137382_1037555123300012200Vadose Zone SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAEAMVKTLSKGPRAATVKYTAKEFNIG*
Ga0137377_1054670423300012211Vadose Zone SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAEAMVKTLSEGPRAATVKYTAKEFNLE*
Ga0137447_102033733300012226SoilMYRILCDRTPARELGSGLTWLKKDGHIVEFATTEEAGALVKELTEGRSAATVKYSAKEFNFD*
Ga0137465_106038813300012231SoilMYRILCDRTPARELGSGLTWFKKNGHVVEFATTEEAGVMVKELSAGRSAATVKYTAKEFNIE*
Ga0137370_1010463113300012285Vadose Zone SoilMYRILCDRTPARERGSGLTWFMEDGKIVEFSTSEEAGAMVKTLSEGPRAATVKYTAKEFNLE*
Ga0157344_100845323300012476Arabidopsis RhizosphereMYRILCDRQPARELGSGLTWLMENGKIVEFATTEEAGAMVKKLSAGPRAATVTYTAKKYNHDD*
Ga0157299_1033121623300012899SoilLCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVTYTAKQFN
Ga0157282_1009519923300012904SoilARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVTYTAKQFNPDG*
Ga0137394_1003449823300012922Vadose Zone SoilMYRILCDRQPARELGSGLFWLTENGKIVEFSTTEEAGAMVKKLSEGPRAASVTYTAKEYNPED*
Ga0153915_1007117763300012931Freshwater WetlandsMYRILCDRTPARELGSGLTWFNVDGKIVEFATTEEAGAMVKKLSEGPRAATVKYTAKEFNPE*
Ga0164307_1032195023300012987SoilRFHMYRILCDRQPARELGSGLTWFMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKKYNPDD*
Ga0157307_105857523300013096SoilLYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVTY
Ga0157378_1055701213300013297Miscanthus RhizosphereMVRKTISKVRLGGFIYMYRILCDRTPARELGSGLTWFKEDGKIVEFSTPEEAGVVVKKLSEGRRAATTKYTAKEFNLD*
Ga0075312_103358823300014254Natural And Restored WetlandsLCDRSPARELGSGLTWFNVDGKIVEFATTEEAAAMVKKLSEGPRAAMVKYTAKEFNPE*
Ga0075309_115037423300014268Natural And Restored WetlandsFMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAGAMVKTLSEGRRAATVKYTAKEFKLE*
Ga0075304_113188813300014307Natural And Restored WetlandsMPARELGSGLTWFMQDGRIVEFATTEEAAAMAKELTDRRNLAKTLSTSTVTYTAKEIKIY
Ga0075322_106947913300014311Natural And Restored WetlandsMYRILCDRSPARELGAGLTWFNEDGKIIEFATAEEAGAMAKKLSEGPRAANVKYTAKEFNLD*
Ga0157380_1290904413300014326Switchgrass RhizosphereLYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVKYTAKQFNPDG*
Ga0157377_1015364423300014745Miscanthus RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVT
Ga0157376_1260137713300014969Miscanthus RhizosphereRLKSTRRFVMYRILCDRTPARELGSGLTWFKENGKILEFSTLKDAGVKVKELSEHPRAANVKYSAERYETD*
Ga0173483_1029875113300015077SoilLYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVTYTAK
Ga0173480_1085986423300015200SoilPARELGSGLTWLMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKQYNPE*
Ga0180081_104375413300015253SoilMPSRELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNAAKTLSTSTVTYTAKEIKIY
Ga0132258_1391909423300015371Arabidopsis RhizosphereMYRILRDRTPARELGSGLTWFMEDSKIVEFSTLEEAGAMVKTLSEGRRAATVKYTAKEFKLD*
Ga0132256_10256898513300015372Arabidopsis RhizosphereRRFHMYRILCDRQPARELGSGLTWLMENGKIVEFATTEEAGAMVKKLSAGPRAATVTYTAKKYNPED*
Ga0132255_10439312613300015374Arabidopsis RhizosphereARELGSGLTWLMENGKIVEFATTEEAGAMVKKLSAGPRAATVTYTAKKYNPED*
Ga0187825_1005510113300017930Freshwater SedimentMYRILCDRTPARELGSGLTWFNVDGKIVEFATTEEAGAMVKKLSEGPRAATVKYTAKEFNPE
Ga0184610_101437513300017997Groundwater SedimentMYRILCDRTPARELGSGLTWFMEDSKIVEFSTLEEAGAMVKTLSEGRRAATVKYTAKEFNLD
Ga0184604_1035424713300018000Groundwater SedimentMYRILCDRTPARELGSGLTWFKEDGKIVEFSTPEEAGVVVKKLSEGRRAATTKYTAKEFNLD
Ga0184621_1000825523300018054Groundwater SedimentMYRILCDRTPARELGSGLTWFMEDSKIVEFATLEEAGAMVKTLSEGRRAATVKYTAKEFNLD
Ga0184623_1051691723300018056Groundwater SedimentCDRTPARELGSGLTWFMEDSKIVEFSTLEEAGAMVKTLSEGRRAATVKYTAKEFNLD
Ga0184637_1014764423300018063Groundwater SedimentMYRILCDRTPARELGSGLTWLKKEGHIVEFATTEEAGALVKELSKRRSAATVKYSAKEFNIE
Ga0184618_1023509023300018071Groundwater SedimentMYRILCDRTPARELGSGLTWFMEDGKIVEFSTSEEAGAMVKTLSEGRRAATVKYTAKEFNLD
Ga0184640_1015577513300018074Groundwater SedimentMYRILCDRTPARELGSGLTWLKKDGHIVEFATTEEAGALVKELTKGRSAATVKYSAKEFNFD
Ga0184640_1021322423300018074Groundwater SedimentMYRILCDRTPARELGSGLTWFRKDGRIVEFATTEEAGALVKELSEGRNAATVKYSAKEFNVE
Ga0184633_1005685723300018077Groundwater SedimentMYRILCDRTPARELGSGLTWLKKDGHIVEFATTEEAGALVKELTKGRSAATVKYLAKEFNVE
Ga0190265_1018297133300018422SoilLYRILCDRTPARELGSGLTWFKEDGKIAQFSTPEEAEVMVKKLSEGRRAATVKYTAKEFNLD
Ga0190265_1072106413300018422SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTAEEAGAMVKTLSEGPRAATVKYTAKEFNLD
Ga0190275_1333546113300018432SoilMYRILCDRTPARELGSGLTWFKEDGKIVEFSTTEEAEVQVKKLSEGRRAATTKYTAKEFNLD
Ga0066667_1023432613300018433Grasslands SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAGAMVKTLSEGPRAATVKYTAKEFNLE
Ga0190269_1199529023300018465SoilMYRVLCDRTPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNKTKTLSTSTVTYTAKEIKDY
Ga0190270_1000909053300018469SoilMYRILCDRTPARELGSGLTWYRKDGKVVEFATTEEAGVMVKELSAGRSAATVKYTAKEFNIE
Ga0190274_1245205713300018476SoilMYRILCDRTPARELGSGLTWYRKDGKVVEFATTEEAGVMVKELSAGRSAATVKYTAKEFKFE
Ga0190274_1351205123300018476SoilMYRVLCDRTPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNTTKTLSTSMVTYTAKEIKIY
Ga0066669_1064463723300018482Grasslands SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTSEEAGAMVKTLSEGPRAATVKYTAKEFNLE
Ga0180119_127168013300019228Groundwater SedimentMYRILCDRTPARELGSGLTWFRKDGKVVEFATTEEAGVMVKELSAGRSAATVKYTAKEFNIE
Ga0184647_122147423300019263Groundwater SedimentMYRILCDRTPARELGSGLTWFRKDGKVVEFATTEEAGVMVKELSEGRSAATVKYTAKEFKFE
Ga0173481_1018909613300019356SoilMYRVLCDRTPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNAAKTLSTSTVTYTAKEIKIY
Ga0173482_1014668723300019361SoilLCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRATTGSTVTYTAKKYNADD
Ga0173479_1012915823300019362SoilMYRILCDRTPARELGSGLTWFRKDGKIVEFATTEEAGVIVKELSEGRSTATVKYTAKEFKFE
Ga0173479_1013193913300019362SoilLYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRATTGSTVTYTAKKYNADD
Ga0193743_100775413300019889SoilMFRILCDRTPARELGSGLTWFKEDGKIVEFSTTEEAEVQVKKLSEGRRAATTKYTAKEFNLD
Ga0193739_112731113300020003SoilMYRILCDRTPARELGSGLTWFRKDGKIVEFATTEEAGVIVKELSERRSTATVKYTAKEFNVE
Ga0193733_110865613300020022SoilMYRILCDRTPARELGSGLTWFIEDGKIVEFATPEEAGAMVKTLSEGPRAATVKYTAKEFNLE
Ga0193717_104703923300020060SoilMYRILCNRTPARELGSGLTWFKEDGKIVEFSTPEEAGVLVKKLSEGRRAATTKYTAKEFNRE
Ga0194131_10001651303300020193Freshwater LakeMYRILCDRVPARELGSGLTWFKQDGKVVEFATPEEAGDMVKQLNNGPRAATVKYSAIEFNLE
Ga0210377_1048425723300021090Groundwater SedimentMYRILCDRTPARELGSGLTWFKEDGKIVEFSTTEEAEVQVKKLSEGRRAATTKYTAKEFSAD
Ga0182009_1083298413300021445SoilLYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVTYTAKQFNPDG
Ga0224505_1002214833300022214SedimentMYRILCDRMPARELGSGLTWFMKDGRVAEFATTEEAGLMVKELTDRRSAVKTMSASTVTYTAKEVKIY
Ga0247745_105904223300022898SoilSLYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVTYTAKQFNPDG
Ga0124853_134216833300024056Freshwater WetlandsMYRILCDRQPARELGSGLTWLMENGKIVEFATTEEAGAMVKKLSAGPRAATVTYTAKKYNPED
Ga0207697_1001588323300025315Corn, Switchgrass And Miscanthus RhizosphereMYRILCDRQPARELGSGLTWFMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKKYNPDD
Ga0207697_1013306513300025315Corn, Switchgrass And Miscanthus RhizosphereRRFHMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVTYTAKKYNADD
Ga0210061_101027213300025537Natural And Restored WetlandsMYRILCDRSPARELGSGLTWFNVDGKIVEFATTEEAAAMVKKLSEGPRAAMVKYTAKEFNPE
Ga0210087_100092633300025559Natural And Restored WetlandsMYRILCDRTPARELGSGLTWFMEDGKIVEFSTLEEAGAMVKTLSEGPRAATVKYTAKEFNPE
Ga0210114_102298213300025795Natural And Restored WetlandsCDRSPARELGSGLTWFNVDGKIVEFATTEEAAAMVKKLSEGPRAAMVKYTAKEFNPE
Ga0207688_1008773223300025901Corn, Switchgrass And Miscanthus RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVMYTAKKYNADD
Ga0207680_1007414823300025903Switchgrass RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVTYTAKQYNADD
Ga0207680_1047413013300025903Switchgrass RhizosphereMYRILCDRTPARELGSGLTWFKENGKILEFSTLKDAGVKVKELSEHPRAANVKYSAER
Ga0207654_1057165923300025911Corn RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAAAMVKKLTEGRRATTGSTVTYTAKKYNADD
Ga0207707_1001058763300025912Corn RhizosphereMYRILCDRQPARELGSGLFWLTENGKIVEFATTEEAGAMVKKLSEGPRAASVTYTAKEFNPDD
Ga0207693_1034172813300025915Corn, Switchgrass And Miscanthus RhizosphereMYRILCDRQPARELGSGLTWLMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKQYNPE
Ga0207694_1054059113300025924Corn RhizosphereLYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRATTGSTVMYTAKKYNADD
Ga0207650_1163401813300025925Switchgrass RhizosphereMYRVLCDRMPARELGSGLTWFMQDGRVVEFATTEEVGAMVKELTDRRNRTKTLSTSTVTYTAKEVKIY
Ga0207706_1125606013300025933Corn RhizospherePARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRATTGSTVTYTAKKYNADD
Ga0207704_1096216133300025938Miscanthus RhizosphereMYRILCDRQPARELGSGLTWLMENGKIVEFATTEEAGAMVKKLSAGPRAATVTYTAKKYNPDD
Ga0207689_1032859113300025942Miscanthus RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRATTGSTVTY
Ga0207679_1112280723300025945Corn RhizosphereCDRQPARELGSGLTWFMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKKYNPDD
Ga0207712_1146439113300025961Switchgrass RhizosphereMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAGAMVKTLSEGPRAATVKYTAKEFKIE
Ga0208002_100177533300026029Natural And Restored WetlandsPARELGSGLTWFMEDGKIVEFSTLEEAGAMVKTLSEGPRAATVKYTTKEFNPE
Ga0208002_102832223300026029Natural And Restored WetlandsMYRILCDRTPARELGSGLTWFMEDGKIVEFSTLEEAGAMVKTLSEGPRAATVK
Ga0207703_1044666933300026035Switchgrass RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTPEEAGAMVKKLTEGRRAATASTVTYTAKQFNPDG
Ga0208911_101242423300026051Natural And Restored WetlandsMYRILCDRSPARELGAGLTWFNEDGKIIEFATAEEAGAMAKKLSESPRAANVKYTAKEFNLD
Ga0207676_1086997213300026095Switchgrass RhizosphereMYRILCDRQPARELGSGLTWFMENGKIVEFATTEEAGAMVKKLSEGRRAATTKYTAKEFNLD
Ga0207674_1060273433300026116Corn RhizosphereMYRVLCDRMPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNAAKTLSTSTVTYTAKEIKIY
Ga0207674_1172771423300026116Corn RhizosphereMYRILCDRTPARELGSGLTWFMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKKYNPDD
Ga0207675_10106840213300026118Switchgrass RhizosphereMYRILCDRQPARELGSGLTWFKEDGKIVEFSTPEEAGVVVKKLSEGRRAATTKYTAKEFNLD
Ga0209438_106803423300026285Grasslands SoilMYRILCDRQPARELGSGLFWLTENGKIVEFSTTEEAGAMVKKLSEGPRAASVTYTAKEYNPED
Ga0209131_109069533300026320Grasslands SoilMYRILCDRTPARELGSGLTWFKKDGRIVEFATTEEAGAMVTELTELRSAARATATSTVKYVAKEFNVE
Ga0256867_1003534833300026535SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAGAMVKTLSEGPRAATVKYTAKEFNIE
Ga0210002_107241313300027617Arabidopsis Thaliana RhizosphereRELGSGLTWFNVDGKIVEFATTEEAAAMVKKLSEGPRAAMVKYTAKEFNPE
Ga0209818_100347823300027637Agricultural SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTLEEAGAMVKTLSEGPRAATVKYTAKEFNLE
Ga0209983_114175713300027665Arabidopsis Thaliana RhizosphereDRSPARELGSGLTWFNVDGKIVEFATTEEAAAMVKKLSEGPRAAMVKYTAKEFNPE
Ga0209971_101659823300027682Arabidopsis Thaliana RhizosphereMYRILCDRSPARELGSGLTWFNVDGKIVEFATTEEAAAMVKKLSEGPRAAMVKYTAKEFN
Ga0209178_116506313300027725Agricultural SoilMYRILCDRQPARELGSGLTWFMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAK
Ga0209592_114621923300027731Freshwater SedimentMYRILCDRSPARELGSGLTWFKEDGKIVEFSTTEEAEVMVKKLSEGRRAATVKYTAKEFNLD
Ga0209261_1016652013300027735Wetland SedimentMYRILCDRMPARELGSGLTWFMKDGRVVEFATTEEAGVMVKELTERRSAVKTMSASTITY
Ga0209464_1025405113300027778Wetland SedimentMYRILCDRMPARELGSGLTWFMKDGRVVEFATTEEAGVMVKELTDRRSAAKTMSTSTVTYSAKEVKVY
Ga0209726_1015335523300027815GroundwaterMYRILCDRMPARELGSGLTWFMKDGRIVEFATTEEAGVMVKELTDRRSAVKTMSASTVTYSAKEFKIY
Ga0209706_1036804623300027818Freshwater SedimentMYRVLCDRIPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNAAKTLSTSTVTYTAKEIKIY
Ga0209683_1002588343300027840Wetland SedimentMYRILCDRMPARELGSGLTWFMKDGRVVEFATTEEAGVMVKELTERRSAVKTMSASTITYTAKEFKIY
Ga0209293_1066830223300027877WetlandMYRVLCDRMPARELGSGLTWFMRDGRVVEFATTEEAGAMVKELTDRRNTTKTLTTSKVTYTAKEIKIY
Ga0209382_1061175423300027909Populus RhizosphereMYRILCDRTPARELGSGLTWYRKDGKVVEFATTEEAGVMVKELSAGRSAATVKYTAKEFNVE
Ga0209382_1114282123300027909Populus RhizosphereMYRILCDRQPARELGSGLTWLKEDGKIVEFSTTEEAGAMVKKLTEARRAATASTVTYTAKKYNFDD
Ga0299906_1082992223300030606SoilMYRILCDRTPARELGSGLTWFMEDGKIVEFSTPEEAAAMVKTLSEGPRAATVKYTAKEFNLE
(restricted) Ga0255311_107716923300031150Sandy SoilILCDRTPARELGSGLTWFMEDSKIVEFATLEEAGAMVKTLSEGRRAATVKYTAKEFNLD
Ga0307497_1012476413300031226SoilMYRVLCDRMPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNAAKTLTTSTVTYTAKEIKIY
Ga0299913_1022388033300031229SoilMYRILCDRQPARELGSGLTWFMENSKIVEFSTTEEAAAMVKKLSEGPRAATVTYTAKEFNRDD
Ga0310888_1101407423300031538SoilMYRVLCDRTPARELGSGLTWFMQDGRVVEFATTEEVGAMVKELTDRRNRTKTLSTSTVTYTAKEVKIY
Ga0310886_1107828013300031562SoilMYRVLCDRMPARELGSGLTWFMRDGRVVEFATTEEAGAMVKELTDRRNAAKTLTTSTVTYTAKEIKIY
Ga0310813_1003559623300031716SoilMYRILCDRQPARELGSGLFWLTENGKIVEFATTEEAGAMVKKLSEGPRAASVTYTAKKFNPDDY
Ga0310813_1017208313300031716SoilMYRILCDRQPARELGSGLTWLMENGKIVEFATTEEAGAMVKKLSEGPRAATVTYTAKKY
Ga0307411_1192880013300032005RhizosphereMYRILCDRQPARELGSGLTWFMEDGKVVEFSTPEEAGAMVKKLSEGPRAATVTYTAKEFNPDDY
Ga0310895_1068280513300032122SoilMYRILCDRTPARELGSGLTWFMEDSKIVEFATLEEAGAKAKTLSEGRRAATVKYTAK
Ga0315910_1006067533300032144SoilMYRILCDRTPARELGSGLTWLKENGKIVEFATTEEAGAMVKKLSEGPRAATVKYTAREYTYD
Ga0315910_1161263013300032144SoilMYRILCDRQPARELGSGLTWFMENGKVVEFATTEEAAAMVKKLSEGPRAATTTYTAKEFNPDDY
Ga0315912_1044772023300032157SoilMYRVLCDRVPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNAAKTLSTSTVTYTAKEVKIY
Ga0315912_1141358923300032157SoilMYRILCDRTPARELGSGLTWLKENGKIVEFATTEEAGAMVKKLSEGPRAATVK
Ga0307472_10139310323300032205Hardwood Forest SoilMYRILCDRTPARELGSGLTWLKKDGKIVEFSTTEEAGVMVKELSAGRYAASVKYTAKEFIPGGD
Ga0310896_1027320823300032211SoilMYRILCDRTPARELGSGLTWFRKDGKVVEFATTEEAGVMVKELSEGRSAATVKY
Ga0310810_1107738623300033412SoilMYRILCDRTPARELGSGLTWFKKDGHIVEFATTEEAGAMVVELTELRSAARATATSTVKYVAKEFNIE
Ga0326726_1041250023300033433Peat SoilMYKILCDRMPARELGSGLTWFMQDGRVVEFATTEEAGAMVKELTDRRNAAKTLSTSTVTYTAKEIKIY
Ga0316624_1016450113300033486SoilMYRILCDRTPARELGSGLTWFNVDGKIVEFATTEEAGAMVKKLSEGPRAATVKY
Ga0316624_1214582513300033486SoilRTPARELGSGLTWFNVDGKIVEFATTEEAGAMVKKLSEGPRAATVKYTAKEFNPE


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