NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F017865

Metagenome / Metatranscriptome Family F017865

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F017865
Family Type Metagenome / Metatranscriptome
Number of Sequences 238
Average Sequence Length 40 residues
Representative Sequence SMGYLEIAANRAAAAQITGAGKGSEVSILLGEAAAAGKGA
Number of Associated Samples 195
Number of Associated Scaffolds 238

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.10 %
% of genes near scaffold ends (potentially truncated) 95.80 %
% of genes from short scaffolds (< 2000 bps) 90.76 %
Associated GOLD sequencing projects 183
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.639 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(13.445 % of family members)
Environment Ontology (ENVO) Unclassified
(19.748 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.202 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.
12PV_00263610
2JGI11615J12901_104537291
3Ga0062389_1026679861
4Ga0063356_1061353942
5Ga0062595_1014746851
6Ga0066672_100287781
7Ga0066679_108873271
8Ga0066685_111536691
9Ga0066678_105744343
10Ga0065707_106439972
11Ga0066388_1002669133
12Ga0066388_1037521272
13Ga0070699_1007548923
14Ga0070741_103787843
15Ga0070697_1001682152
16Ga0070733_110732582
17Ga0070732_104965521
18Ga0070732_109925722
19Ga0070693_1007389751
20Ga0066670_106272512
21Ga0066699_100570645
22Ga0066703_105773751
23Ga0066702_109057651
24Ga0066654_101070551
25Ga0070761_102043181
26Ga0070762_100123921
27Ga0070762_106379521
28Ga0070740_102206531
29Ga0066903_1017455441
30Ga0066903_1032544331
31Ga0066903_1034680383
32Ga0066903_1073223871
33Ga0070766_102168333
34Ga0070766_112106971
35Ga0080027_100402524
36Ga0080027_102228863
37Ga0066790_100586174
38Ga0070717_120792262
39Ga0066696_105414543
40Ga0066656_107245593
41Ga0075017_1003139875
42Ga0075019_101813504
43Ga0075019_102891454
44Ga0075015_1001157474
45Ga0075015_1003103441
46Ga0075015_1005869993
47Ga0075015_1006920661
48Ga0075030_1001358601
49Ga0070712_1014335783
50Ga0075527_101090421
51Ga0079222_117441612
52Ga0066660_108044943
53Ga0099794_103812253
54Ga0102924_10698324
55Ga0066710_1009952582
56Ga0099830_105281604
57Ga0099827_107140551
58Ga0105240_125078232
59Ga0105245_114833171
60Ga0066709_1007985172
61Ga0066709_1045718001
62Ga0116229_102166633
63Ga0116222_12802553
64Ga0116222_15363872
65Ga0116220_104798112
66Ga0116105_10944241
67Ga0116119_11535931
68Ga0116224_104298142
69Ga0116130_11911341
70Ga0126374_103425861
71Ga0123356_129033162
72Ga0126370_100923195
73Ga0126370_106698591
74Ga0126372_100289154
75Ga0126372_132639132
76Ga0134128_110887433
77Ga0126381_1025746201
78Ga0136449_1039925711
79Ga0134121_129868402
80Ga0150983_128476541
81Ga0137388_105598333
82Ga0137388_111967953
83Ga0137382_105685413
84Ga0137382_109688781
85Ga0137363_102919731
86Ga0137380_110549901
87Ga0137381_110106321
88Ga0137381_110180371
89Ga0137381_113986813
90Ga0137377_107184211
91Ga0137375_102074784
92Ga0137390_113298291
93Ga0137413_110146063
94Ga0137404_102577064
95Ga0137404_123387711
96Ga0137407_107999283
97Ga0126369_110680461
98Ga0134087_102570661
99Ga0157373_105734861
100Ga0157374_112737291
101Ga0157378_117917302
102Ga0134079_104544041
103Ga0181531_107841023
104Ga0182021_114952093
105Ga0181522_101059502
106Ga0137405_10030473
107Ga0137420_131454112
108Ga0137412_103448181
109Ga0182036_111851531
110Ga0182041_105302221
111Ga0182041_105593141
112Ga0182039_100672604
113Ga0182039_113470381
114Ga0187802_102256412
115Ga0187807_11597173
116Ga0187814_103320592
117Ga0187821_103276661
118Ga0187775_102196021
119Ga0187847_105350221
120Ga0187782_103036184
121Ga0187816_104012221
122Ga0187880_12991293
123Ga0187869_101463482
124Ga0187863_106989391
125Ga0187875_107117211
126Ga0187890_107993493
127Ga0187772_103842453
128Ga0187769_109468741
129Ga0187771_108045171
130Ga0187770_103797293
131Ga0066662_119653331
132Ga0066669_112457941
133Ga0187800_15640252
134Ga0182025_11520963
135Ga0187768_10405301
136Ga0179594_103266031
137Ga0210407_104479071
138Ga0210403_108275691
139Ga0210395_103196974
140Ga0210401_103868854
141Ga0210406_100571171
142Ga0210400_108545542
143Ga0210400_108565343
144Ga0210405_109206193
145Ga0210408_110024763
146Ga0210408_111020071
147Ga0210388_108657633
148Ga0210388_113137123
149Ga0210397_105941583
150Ga0210397_112794841
151Ga0210387_105933883
152Ga0210391_104190853
153Ga0210390_100954841
154Ga0187846_101432223
155Ga0210398_112933512
156Ga0210402_100177361
157Ga0210402_104137501
158Ga0210402_108082341
159Ga0210402_110262641
160Ga0210402_114362233
161Ga0210410_100085871
162Ga0210409_101700641
163Ga0210409_102501781
164Ga0222728_11247902
165Ga0242661_11439301
166Ga0224572_10230001
167Ga0208935_10132584
168Ga0207699_113391042
169Ga0207646_105579571
170Ga0207646_117647682
171Ga0207687_113530381
172Ga0207664_100445071
173Ga0207664_107512813
174Ga0209468_12040352
175Ga0209686_12304991
176Ga0257172_10952361
177Ga0209160_12651511
178Ga0179593_12270406
179Ga0208043_11812131
180Ga0209139_101169343
181Ga0209039_101004011
182Ga0209580_101562581
183Ga0209580_101788164
184Ga0209580_103185613
185Ga0209580_106064561
186Ga0209580_106687812
187Ga0209274_105677371
188Ga0209517_106440423
189Ga0209169_101445354
190Ga0209590_105941833
191Ga0209590_109363063
192Ga0209275_100315181
193Ga0209067_101599621
194Ga0209067_102367433
195Ga0209067_108240602
196Ga0209415_105372741
197Ga0209698_101399981
198Ga0209168_103927351
199Ga0265354_10107751
200Ga0265349_10045351
201Ga0302147_101607951
202Ga0265338_101870141
203Ga0308309_112450812
204Ga0311371_118009351
205Ga0302304_101901233
206Ga0302304_103931982
207Ga0302270_104595041
208Ga0302177_100427155
209Ga0311353_108040003
210Ga0302183_102158433
211Ga0302275_101511341
212Ga0311355_100552485
213Ga0265765_10655852
214Ga0170834_1011433081
215Ga0265760_101129613
216Ga0170824_1197391821
217Ga0302324_1008051581
218Ga0170820_131311682
219Ga0318528_100962274
220Ga0307476_103359674
221Ga0307474_100548551
222Ga0307469_101909074
223Ga0307475_108822843
224Ga0307475_114621091
225Ga0318529_100288814
226Ga0318550_106128182
227Ga0307478_107452433
228Ga0306923_113874751
229Ga0307472_1020900421
230Ga0348332_102679473
231Ga0335085_106136311
232Ga0335078_101409215
233Ga0335070_108419332
234Ga0335081_101024101
235Ga0335072_110872301
236Ga0335083_102128361
237Ga0335077_102417634
238Ga0326726_116274972
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 11.76%    β-sheet: 0.00%    Coil/Unstructured: 88.24%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540SMGYLEIAANRAAAAQITGAGKGSEVSILLGEAAAAGKGASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
96.6%3.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog Forest Soil
Bog
Peatland
Freshwater Sediment
Iron-Sulfur Acid Spring
Watersheds
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Surface Soil
Peatlands Soil
Switchgrass Rhizosphere
Soil
Agricultural Soil
Arctic Peat Soil
Soil
Grasslands Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Peatland
Tropical Peatland
Fen
Soil
Prmafrost Soil
Permafrost
Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Palsa
Bog
Peat Soil
Plant Litter
Biofilm
Termite Gut
Arabidopsis Thaliana Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Rhizosphere
Host-Associated
Switchgrass, Maize And Mischanthus Litter
5.0%10.9%2.9%4.6%3.4%6.3%13.4%2.9%2.9%2.9%3.8%3.4%3.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
2PV_002636102170459014Switchgrass, Maize And Mischanthus LitterMGYLEIAANRGSAAQIVGAGKGADVNLKLEGAAAAANGE
JGI11615J12901_1045372913300000953SoilGIGGSMGYLEIAANRASAAQLLGAAKGSEVVLSFDNAASASNGN*
Ga0062389_10266798613300004092Bog Forest SoilIIGSMGYLEIVANRAAAAQITGAGKGSEVSIFLGEAAAAGKGA*
Ga0063356_10613539423300004463Arabidopsis Thaliana RhizosphereILGSMGYLEIASNRGSAAKIVGSGKGSEVMISLEGAAAAGNGN*
Ga0062595_10147468513300004479SoilSMGYLEIVANRAAAAQLTGAGKGSEVSIVLGEGAAAGKGA*
Ga0066672_1002877813300005167SoilGSMGYLEIAANRGSAAQLLGTGKGTEVSLVIESAAAASNGK*
Ga0066679_1088732713300005176SoilLGSMGYLEIAANRGAAAQLLGVGKGTDVNIVLGGAAAAGK*
Ga0066685_1115366913300005180SoilLFAILGSMGYLEIAANRAAAAQLAGAGKGTEISLVLEGAVAAGNGQ*
Ga0066678_1057443433300005181SoilLGSMGYLEIAANRGSAAQIVGVGKGSDVNIIMEGAAAASNGQ*
Ga0065707_1064399723300005295Switchgrass RhizosphereLGSMGYLEIAANRASAQQLIGSGKGTEVNLVLQGAAAAKNGQ*
Ga0066388_10026691333300005332Tropical Forest SoilSMGYLEIAANRAAAAQLTGAAKGSEVSLVFEGAAAAGNGK*
Ga0066388_10375212723300005332Tropical Forest SoilILGSMGYLEIVANRASALQLVGSGKGSEVNLMLESAAGASNGQ*
Ga0070699_10075489233300005518Corn, Switchgrass And Miscanthus RhizosphereILGSMGYLEIAANRGSAAQILGVGKGSDVSIVLEGAVAASNGQ*
Ga0070741_1037878433300005529Surface SoilMGYLEIAANRGAANQLSAATKGTEVTIVLEGAVAANG*
Ga0070697_10016821523300005536Corn, Switchgrass And Miscanthus RhizosphereIFGILGSMGYLEIAASRGSAAQLLGTGKGTEVNLVIEGAAAASNGK*
Ga0070733_1107325823300005541Surface SoilYLEIVSNRAAAAQLLGAGKGAEVGIFLSEAAAAGA*
Ga0070732_1049655213300005542Surface SoilLEIVANRAPAAQLTGAGKGAEVSILLGEAAAAKA*
Ga0070732_1099257223300005542Surface SoilIFGVVGSMGFLEIATNRGAAAQLAGAGKGSEVNVVLGGAAAAKKGA*
Ga0070693_10073897513300005547Corn, Switchgrass And Miscanthus RhizosphereILGSMGYLEIVANRGSAAQLVGSGKGTEVQLIFEGASAAVNGQ*
Ga0066670_1062725123300005560SoilLEIAANRGMAAQLAGAAKGTEVTVTLEGAVAANG*
Ga0066699_1005706453300005561SoilMGYLEIAANRGSAAQLLGTGKGTEVNLVIEGAAAASNGR*
Ga0066703_1057737513300005568SoilEIAANRGAAAQVVGVGKGTDVSVTLEGAAAAKNGQ*
Ga0066702_1090576513300005575SoilGYLEIAANRAAANQLTGAAKGTEVSIALEGAIAAGNGTD*
Ga0066654_1010705513300005587SoilFGVLGSMGYLEIVANRAPAAQITGVGKGAEVSILFGGAAAAGNGA*
Ga0070761_1020431813300005591SoilGSMGYLEIAANRGAAAQLTGVGKGGEVSILLGSAVAAGKGA*
Ga0070762_1001239213300005602SoilEIATNRGAAAQLTGAGKGTDVSVIRGEAAAAGKGA*
Ga0070762_1063795213300005602SoilGILGSMGFLEIAANRASAAQLAGVGKGTEVIVTMGGAAAAGTGA*
Ga0070740_1022065313300005607Surface SoilEIVANRAAAAQLTGAGKGSEVSILLGEAAAAGKGA*
Ga0066903_10174554413300005764Tropical Forest SoilLEIAANRAAAAQILGVNRGTDVNIVLGEAAAACNGQ*
Ga0066903_10325443313300005764Tropical Forest SoilILGSMGFLEIVANRAPAAQLTGAGKGAEVSVQLGGATAAGKGA*
Ga0066903_10346803833300005764Tropical Forest SoilFLEIAANRGAAAQILGVAKGSEVSLSLEGAAAAKNGQ*
Ga0066903_10732238713300005764Tropical Forest SoilIAANRGSAAQIVGAGKGSDVKVNFENAAAAKNGQ*
Ga0070766_1021683333300005921SoilGYLEIVANRAAAAQLTGAGKGSEVSIFLGEAAAAGKGA*
Ga0070766_1121069713300005921SoilEIAANRGNAAQITGAGKGNEVSIILGEGAAAGKSA*
Ga0080027_1004025243300005993Prmafrost SoilGYLEIAANRAAAVQLTAAGKGSEVNVVLEAAVAAGNGQ*
Ga0080027_1022288633300005993Prmafrost SoilLGSMGFLEIAANRGAAAQLAEAGKGSDVSIVLGDVAAAGA*
Ga0066790_1005861743300005995SoilPGSMGYLEIAANRASAFQLLGSGKGTEVNIILEGAAATSNGI*
Ga0070717_1207922623300006028Corn, Switchgrass And Miscanthus RhizosphereAILGSMGYLEIAANRAAAVQLVGSGKGTEVNIVLEGAAAAGNVQ*
Ga0066696_1054145433300006032SoilGSMGYLEIVANRAAAAQITGAGKGAEVSIVFSEGAAAGKGA*
Ga0066656_1072455933300006034SoilGSMGYLEIAANRGSAAQILGVGKGSDVSIVLEGAVAASNGH*
Ga0075017_10031398753300006059WatershedsLEIAADRGSAAKIVGTGKGTEVTISLQGTSAASSGL*
Ga0075019_1018135043300006086WatershedsLEIVANRAPAAQLTGAGKGAEVSVQLGGATAAGKGA*
Ga0075019_1028914543300006086WatershedsLEIAANRGSAAKIVGSGKGSEVTVSLEGATAVGNGN*
Ga0075015_10011574743300006102WatershedsYLEIAANRGAAAQVLGVGKGTDVNIVLGEAAAATNGQ*
Ga0075015_10031034413300006102WatershedsLGSMGYLEIAANRAAAAQIIGAGKGSEVTIFLPGAAAASNGS*
Ga0075015_10058699933300006102WatershedsLGSMGYLEIAANRAAAAQITGAGKGSEVSIILGEAAAAGNGA*
Ga0075015_10069206613300006102WatershedsSMGYLEIAADRASAAKITGRGKGSEVTVSLEGAVAAGHGD*
Ga0075030_10013586013300006162WatershedsLEIVANRGAAAKATGAGKGAEVLLTLEGAAAAGRR*
Ga0070712_10143357833300006175Corn, Switchgrass And Miscanthus RhizosphereILGSMGYLEIASGRGSAAKIIGSGKGTEVMISLHGTAAASSGN*
Ga0075527_1010904213300006640Arctic Peat SoilGSMGYLEIVANRAAAAQITGAGKGSEVTIFLGEAAAAGKGA*
Ga0079222_1174416123300006755Agricultural SoilGILGSMGYLEVAANRGSAYQLIGSGKGTEVMVVIGEAAAASNGS*
Ga0066660_1080449433300006800SoilGILGSMGFLEIAANRGAAAQVLAVGKGTEVNIILGEAAAAGKGA*
Ga0099794_1038122533300007265Vadose Zone SoilVFGILGSMGYLEIAADRGSAAKIIGTGKGSEVKLSLQGAAAAISGT*
Ga0102924_106983243300007982Iron-Sulfur Acid SpringGILGSMGFLEIVANRAAAAQITGAGKGAEVSIFLGEAAAAGKGA*
Ga0066710_10099525823300009012Grasslands SoilGYLEIAADRGSAAKIIGTGKGTEVIVSLEDAAAARNGN
Ga0099830_1052816043300009088Vadose Zone SoilGSMGFLEIAANRGAAAQLTGTGKGNEVSIIFGGGAAASKGA*
Ga0099827_1071405513300009090Vadose Zone SoilEIASNRGAAAQLVSAGKGAEVNVVLEGAAAAGNGQ*
Ga0105240_1250782323300009093Corn RhizosphereYLEIVANRGSAAQLVGSGKGTEVQLIFEGASAAVNGH*
Ga0105245_1148331713300009098Miscanthus RhizosphereILGSMGYLEIAANRGSAAKIVGSGKGSEVTISLEGAAAAGNGN*
Ga0066709_10079851723300009137Grasslands SoilLGSMGYLEIAANRGSAAQLLGTGKGTEVSLVIESAAAASNGK*
Ga0066709_10457180013300009137Grasslands SoilILGSMGYLEIVANRAPAAQLTGAGKGAEVTVQLGGATAAGKGA*
Ga0116229_1021666333300009500Host-AssociatedMGYLELAANRGSAAQLLGIAKGAEVTLTLEQGNAASSGK*
Ga0116222_128025533300009521Peatlands SoilMGFLESAANRGAAAQLAGAGKGSEVNVVLGGAAAAKKGA*
Ga0116222_153638723300009521Peatlands SoilFLEIAANRAAAAQLTGAGKGTDVSVILGDAAAAGKGA*
Ga0116220_1047981123300009525Peatlands SoilMGYLEIVANRAAAAQITGAGKGSEVTIILGEAAAAGKSV*
Ga0116105_109442413300009624PeatlandMGFLEIAANRAPAAQLAAAGKGTEVIIVMGEAAAAGKGA*
Ga0116119_115359313300009629PeatlandIAANRGAAAQITGAGKGSEVSIFLGEAAAAGKGA*
Ga0116224_1042981423300009683Peatlands SoilSMGYLEIASNRAAAAQAIGVGKGSEVTIVLEGAAAASNGK*
Ga0116130_119113413300009762PeatlandSMGFLEIAANRGAAVQLTGIGKGSEISIILGEAAAAGKGA*
Ga0126374_1034258613300009792Tropical Forest SoilGSMGYLEIVANRAPAAQLTGVGKGAEVSVQFNGATAAGKGA*
Ga0123356_1290331623300010049Termite GutFAILGSMGYLEISANRGAASRLTGAAKGSEVTVSLGGAPAAGS*
Ga0126370_1009231953300010358Tropical Forest SoilGILGSMGFLEIVANRGPAAQITGAGKGSEVQILLGEGAAAGKGA*
Ga0126370_1066985913300010358Tropical Forest SoilLEIAANRAAAAQILGVNRGTDVNIVLGQAATAGNGQ*
Ga0126372_1002891543300010360Tropical Forest SoilMGSMGYLEIAANRGAAAQLLGVGKGTDVNIVLGEAAGAGK*
Ga0126372_1326391323300010360Tropical Forest SoilGILGSMGYLEIVANRAPAAQLTGVGKGAEVSVQFNGATAAGKGA*
Ga0134128_1108874333300010373Terrestrial SoilGSMGYLEIVANRAAAAQLTGAGKGSEVSIVLGEETAAGKGA*
Ga0126381_10257462013300010376Tropical Forest SoilSMGYLEIVANRAPAAQLTGVGKGAEVSVQLNGATAAGKGA*
Ga0136449_10399257113300010379Peatlands SoilIVGSMGYLEIVANRAAAAQITGAGKGSEVSIFLGEAAAAGKGA*
Ga0134121_1298684023300010401Terrestrial SoilGILGSMGYLEIAANRGSAHQLIGSGKGTEVNVILEGAAAAGTGN*
Ga0150983_1284765413300011120Forest SoilMGFLEIAANRGAAAQLTGVGKGNEVSIILGEAAAKGKGA*
Ga0137388_1055983333300012189Vadose Zone SoilLGSMGYLEIAANRGSAAQLLGTGKGTEVSLVIEGAAGASNGR*
Ga0137388_1119679533300012189Vadose Zone SoilLEIAANRGAAVQLTGAGKGTDVTIVMGEAAAAGEGA*
Ga0137382_1056854133300012200Vadose Zone SoilVFGIVGSMGYLEIAADRGSAAKITGSGKGTEVLISLQGTAAASSGQ*
Ga0137382_1096887813300012200Vadose Zone SoilYLEIVANRSSAAQLVGSGKGTEVQLILEGATAATNGQ*
Ga0137363_1029197313300012202Vadose Zone SoilMGFLEIAANRGAAAQLTGAGKGTDVNIILGESAAAGKGA*
Ga0137380_1105499013300012206Vadose Zone SoilFAILGSMGYLEIAANRAAAAQLATAGKGTEVSLILEGAVAAGNGQ*
Ga0137381_1101063213300012207Vadose Zone SoilLEIAANRGSAAQLLGTGKGTEVSLVIEGAAAASNGR*
Ga0137381_1101803713300012207Vadose Zone SoilILGSMGYLEIAANRGSAAQLLGTGKGTEVSLVIEGAAAASNGS*
Ga0137381_1139868133300012207Vadose Zone SoilILGSMGYLEIVANRAAAAQITGAGKGSEVSIFLGEAAAAGNGA*
Ga0137377_1071842113300012211Vadose Zone SoilSMGYLEIAANRGSAAQLLGTGKGTEVSLVIEGAAAASNGK*
Ga0137375_1020747843300012360Vadose Zone SoilMGYLEIAANRGAAAQIIGVGKGSDVNIVLGEAAAAGNGQ*
Ga0137390_1132982913300012363Vadose Zone SoilLGSMGYLEIVANRGSAAQLLGVGKGTDVNLTLENSAAATNGQ*
Ga0137413_1101460633300012924Vadose Zone SoilEIAADRGSAAKIIGSGKGSEVLISQQGSAAASSGS*
Ga0137404_1025770643300012929Vadose Zone SoilGSMGYLEIAANRGSAAKIVGSGKGSEVTISLGGAAAAGNGN*
Ga0137404_1233877113300012929Vadose Zone SoilGYLEIATNRGSAAKIVGTGKGSEVTISLEGAAAAGNGI*
Ga0137407_1079992833300012930Vadose Zone SoilGYLEIAANRGSAAQIVGVGKGSDVSIVLEGAVAASNGQ*
Ga0126369_1106804613300012971Tropical Forest SoilILGSTGYLELAASRSSAAQLLGVGKGTEIHIVLQGAAVAGHGQ*
Ga0134087_1025706613300012977Grasslands SoilILGSMGYLEIAANRGSAAQLLGTGKGTEVSLVIEGAAAASNGK*
Ga0157373_1057348613300013100Corn RhizosphereEIVDNRAAAAQITGAGKGAEVSIVFSGGAAAGKGA*
Ga0157374_1127372913300013296Miscanthus RhizosphereMGYLEIAANRASAQQLIGSGKGTEVNLVLQGAAAAKNGQ*
Ga0157378_1179173023300013297Miscanthus RhizosphereGILGSMGFLEIATNRGPAAQVLGVGKGSDVSIILGATAAASNGS*
Ga0134079_1045440413300014166Grasslands SoilGSMGYLEIAANRGSAAQLLGTGKGTEVNLVVEGAAAASNGK*
Ga0181531_1078410233300014169BogLGSMGYLEISANRGAAAQIIGASKGNEVVIVMEGAVAASNGQ*
Ga0182021_1149520933300014502FenLLGSMGYLEIAANRGAATQIVGAAKGSEVNLVLQGAVTAATNGQ*
Ga0181522_1010595023300014657BogFLEIAASRGNAAQITGAGKGNEVSIILGEGAAAGKSA*
Ga0137405_100304733300015053Vadose Zone SoilLEIAANRGAAAQIMGAGKGSDVNIVLGEAAAAGNGQ*
Ga0137420_1314541123300015054Vadose Zone SoilMGYLEISANRAAAAQLVNAGKGAEVSIVLEGSAAAGKGQ*
Ga0137412_1034481813300015242Vadose Zone SoilLGSMGFLEIVANRGAAAQLTGTGKGNEVSIILGGSAAAGA*
Ga0182036_1118515313300016270SoilSMGYLEIVANRAPAAQLTGVGKGAEVSVQMGGATAAGKGA
Ga0182041_1053022213300016294SoilILGSMGYLEIAANRGAAAQILGVGKGSDVSIVLGEAAAAGDGR
Ga0182041_1055931413300016294SoilMGYLEIVANRAAAAQLTGVGKGGEVSVLLGGATAAGTRT
Ga0182039_1006726043300016422SoilFAILGSMGYLELAASRASATQLLGVGKGTEVHVVLQGAAVAGQGQ
Ga0182039_1134703813300016422SoilEIAANRASAAQLLGVGKGIDVSIVLGEAAAAGNGG
Ga0187802_1022564123300017822Freshwater SedimentFGILGSMGYLEIAANRGPAAQLAGSGKGTEVTIVFEGAAAASNGQ
Ga0187807_115971733300017926Freshwater SedimentLEIAANRAAAAQIIGVGKGSEVNIVLEGATAAANGQ
Ga0187814_1033205923300017932Freshwater SedimentVFAVLGSMGYLEIVANRAAAAQLTGAGKGSEVSILLGEGAAAGKGA
Ga0187821_1032766613300017936Freshwater SedimentLGSMGFLEVAANRGAATQIVGAGKGADVNIVLGEAAAAGK
Ga0187775_1021960213300017939Tropical PeatlandLGSMGFLEIAANRAAATQVVGAGKGTEVNIVLGDAAAASNGQ
Ga0187847_1053502213300017948PeatlandSMGYLEIAANRAAATQVTGAGKGSEVSIFLGEAAAAGKGA
Ga0187782_1030361843300017975Tropical PeatlandGSMGYLEIVANRAAAAQITGAGKGSEVGVLLGEGAAAGKGA
Ga0187816_1040122213300017995Freshwater SedimentLEIAANRAAAAQIVGAGKGSEVNVILEGAAAAGNGQ
Ga0187880_129912933300018016PeatlandLGSMGYLEIAANRAAAAQITGAAKGSEVSILLGEAAGAGA
Ga0187869_1014634823300018030PeatlandMGFLEIAANRGAAAQLTGAGKGNEVSVILGGAAAAGKGA
Ga0187863_1069893913300018034PeatlandLGSMGFLEIAANRGAAAQITGAGKGAEVSIILGGAVAAGKGA
Ga0187875_1071172113300018035PeatlandYLEIAANRGAAAQITGAGKGSEVSIFLGEAAAAGKGA
Ga0187890_1079934933300018044PeatlandGSMGYLEIAANRGSAAQLTGVGKGAEVNIQLQGATAAGSGQ
Ga0187772_1038424533300018085Tropical PeatlandILGSMGYLEIVSNRASAAQLTGAAKGSEVSIGLGEAAVAGKGA
Ga0187769_1094687413300018086Tropical PeatlandLGSMGYLEIAANRASAAQLVGTGKGSEVTIALGNAAGASNGQ
Ga0187771_1080451713300018088Tropical PeatlandEIAANRASAAQLLGSGKGAEVSIVLESAAGASNGQ
Ga0187770_1037972933300018090Tropical PeatlandGYLEIAANRAAAAQITGAAKGAEVNVLLGEAAATGKGA
Ga0066662_1196533313300018468Grasslands SoilEIAANRGAAAQLVSAGKGAEVNVVLEGAAAAGNGQ
Ga0066669_1124579413300018482Grasslands SoilLGSMGYLEIAANRGSAAQVLGVGKGTDVNVVLGGAAAAGS
Ga0187800_156402523300019278PeatlandGYLELVANRASASQIIGVGKGAEVTILMGEAAAAGKGA
Ga0182025_115209633300019786PermafrostLEIAANRGAAAQLTGAGKGSEVSIILGEAAAVGKGA
Ga0187768_104053013300020150Tropical PeatlandLGSMGYLEIAANRAAAVQLAGAGRGSEVTIVLEGAAAASNGV
Ga0179594_1032660313300020170Vadose Zone SoilGSMGYLELASNRGSAAQLAGIGKGAEVNLALEGSAAAANG
Ga0210407_1044790713300020579SoilGYLEIAANRAAAAQITGAGKGCEVNIVLEGAAAAANGQ
Ga0210403_1082756913300020580SoilGYLEIVANRASAAQITGAGKGSEVSIFLGEAAAAGKGA
Ga0210395_1031969743300020582SoilMGYLEIVANRAAAAQITGAGKGSEVTIFLGEAAAAGKGA
Ga0210401_1038688543300020583SoilYLEIAANRAAAAQLIGSGKGSEVSIVIEGAAAAAR
Ga0210406_1005711713300021168SoilGSMGYLEIAANRAAAAQITGAGKGCEVNIVLEGAAAAANGQ
Ga0210400_1085455423300021170SoilMGYLEIAANRAAAAQLLGVNRGSDVNIILGEAAAAGNGQ
Ga0210400_1085653433300021170SoilEIVANRAAAAQITGAGKGSEVSIFLGEAAAAGQGA
Ga0210405_1092061933300021171SoilLEIAANRAAAAQIIGSGKGSEVNIVLEGATAAANGK
Ga0210408_1100247633300021178SoilMGYLEIAANRAAAAQVIGVGKGSEVNVVLEGAAAASNGQ
Ga0210408_1110200713300021178SoilEIAANRGAAAQLTGAGKGNEVSIILGEAAAAGKGA
Ga0210388_1086576333300021181SoilMGFLEIAANRGAAAQLTGAGKGSEVSIILGEAAAAGKGA
Ga0210388_1131371233300021181SoilHSGSMGYLEIAANRASAAQIIGSGKGSEVNIVLEGAAAASNGG
Ga0210397_1059415833300021403SoilLEIAANRGSAAKIVGSGKGSEVTISLEGAAAAGNGS
Ga0210397_1127948413300021403SoilMGYLEISANRAAAAQIIGAGKGSEVSILLEGASAATNSQ
Ga0210387_1059338833300021405SoilLGSMGFLEIAANRGAAAQLTGAGKGNEVSIILGEAAAAGKG
Ga0210391_1041908533300021433SoilEIVANRAAAAQISGAGKGSEVSIFLGEAAAAGKGA
Ga0210390_1009548413300021474SoilGSMGFLEIAVNRGAAAQLTGAGKGNEVSIILGEAAAAGKA
Ga0187846_1014322233300021476BiofilmGSMGFLEIAANRGAAAQILGVAKGSEVNLSLEGAAAAKNGQ
Ga0210398_1129335123300021477SoilIVGSMGYLEIAANRAAAAQVTSAGKGSEVSIILGEGAAAGKGA
Ga0210402_1001773613300021478SoilLEISANRAAAAQIIGAGKGSEVNIVLESAEAARNGQ
Ga0210402_1041375013300021478SoilMGYLEIAANRAAAAQIIGSGKGSEVNIVLEGATAAANGK
Ga0210402_1080823413300021478SoilGYLEIAANRASAAQIIGTGKGSEVNVIMEGAAAASNGG
Ga0210402_1102626413300021478SoilLELSANRAAAAQLVGAGKGSEVNIVLEGAAAAGNGN
Ga0210402_1143622333300021478SoilAQGTPGEVFGIVGSMGYLEIVANRAAAAQISGAGKGSEVSVFLGEAAAAGKGA
Ga0210410_1000858713300021479SoilLEISANRAAAAQLIGAVKGSEVTIVLEGATAASNGQ
Ga0210409_1017006413300021559SoilGILGSMGFLEIAANRGAAAQLAAAGKGSDVNIVLGEAAAAGKGA
Ga0210409_1025017813300021559SoilYLEIAANRGAAAQVLGVGRGSDVNIVLGEAAAATNGQ
Ga0222728_112479023300022508SoilGILGSMGYLEIVANRAAAAQVTGAVKGSEVSIFLGEAAAAGKGA
Ga0242661_114393013300022717SoilFLEIAANRGAAAQLTGVGKGNEVSIILGEAAAKGKGA
Ga0224572_102300013300024225RhizosphereSMGFLEIAANRGAAAQLTGASKGTDVSVILGEGAAAGKGA
Ga0208935_101325843300025414PeatlandFLEIAANRGAAAQLTGAGKGSDVSVILGEAAAAGKGA
Ga0207699_1133910423300025906Corn, Switchgrass And Miscanthus RhizosphereGFLEVAANRGSAAQVLGVGKGTDVNIVLGGAVAAGNGG
Ga0207646_1055795713300025922Corn, Switchgrass And Miscanthus RhizosphereLGSMGFLEIAANRAAAAQVLGAGKGSDVNIIVEDAAAVATSNK
Ga0207646_1176476823300025922Corn, Switchgrass And Miscanthus RhizosphereGILGSMGYLEIAADRGSAAKIVGTGKGSEVFIALQGTAAASSRE
Ga0207687_1135303813300025927Miscanthus RhizosphereILGSMGYLEIAANRGSAAKIVGSGKGSEVTISLEGAAAAGNGN
Ga0207664_1004450713300025929Agricultural SoilVFGILGSMGYLEIAANRGAAAQLLAVGKGTDVNIVLGGAAAGK
Ga0207664_1075128133300025929Agricultural SoilMGYLEIAANRGAATQLLGVGRGTDVNIVLGESAAAGK
Ga0209468_120403523300026306SoilILGSMCYLEIAANRGSAAQIVGAGKGADVNLKLEGAIAASNGE
Ga0209686_123049913300026315SoilSMGYLEIAANRGAAAQVIGAGKGTDVNVTLEGAAAANNGQ
Ga0257172_109523613300026482SoilLGSMGYLEIAANRGSAAQIVGVGKGSDVSIVLEGAVAASNGQ
Ga0209160_126515113300026532SoilGSMGYLEIAANRGSAAQLLGTGKGTEVSLVIEGAAAASNGK
Ga0179593_122704063300026555Vadose Zone SoilMGFLEIVANRAAAAQITGAGKGAEVSIFLGEAGAAGKGA
Ga0208043_118121313300027570Peatlands SoilMGYLEIAANRAAAAQIIGAGKGSEVNVILEGAAAATNGQ
Ga0209139_1011693433300027795Bog Forest SoilLGSMGYLEIAANRASAAQIIGTGKGSEVNVVLEGAAAASNGQ
Ga0209039_1010040113300027825Bog Forest SoilVIGILGSMGFLEIAANRGAATQLTGVGKGNEVNIILGEAAAAGKGA
Ga0209580_1015625813300027842Surface SoilEIVANRAAAAQIIGAGKGAEVNIFLGEAAAAGKGA
Ga0209580_1017881643300027842Surface SoilGSMGYLEIVANRAPAAQLTGAGKGAEVSILLGEAAAAKA
Ga0209580_1031856133300027842Surface SoilGILGSMGYLEIAANRGAAAQLLGVGKGTDVNIVLGGAAAAGK
Ga0209580_1060645613300027842Surface SoilIVGSMGYLEVSANRGAAAQLVGVGKGAEVLIVLEGAVAAGNGQ
Ga0209580_1066878123300027842Surface SoilIFGVVGSMGFLEIATNRGAAAQLAGAGKGSEVNVVLGGAAAAKKGA
Ga0209274_1056773713300027853SoilVIGILGSMGYLEIAANRGAAAQLTGVGKGGEVSILLGSAVAAGKGA
Ga0209517_1064404233300027854Peatlands SoilYLEIVANRAAAAQITGAGKGSEISIFLGEAAAAGKGA
Ga0209169_1014453543300027879SoilSMGYLEIAANRAAAAQITGAGKGSEVSILLGEAAAAGKGA
Ga0209590_1059418333300027882Vadose Zone SoilEIASNRGAAAQLVSAGKGAEVNVVLEGAAAAGNGQ
Ga0209590_1093630633300027882Vadose Zone SoilILGSMGYLEIAANRGSAAQLLGTGKGTEVNLVVEGAAAASNGK
Ga0209275_1003151813300027884SoilEIATNRGAAAQLTGAGKGTDVSVIRGEAAAAGKGA
Ga0209067_1015996213300027898WatershedsLEIVANRAPAAQITGAGKGSEVQIILGDGAAAGKGA
Ga0209067_1023674333300027898WatershedsGYLEIAANRGSAAKIVGSGKGSEVTVSLEGATAVGNGN
Ga0209067_1082406023300027898WatershedsGSMGFLEIVANRAAAAQITGAGKGSEVSILLGEATAAGKGA
Ga0209415_1053727413300027905Peatlands SoilGSMGYLEIAANRGAAAQITGAGKGSEVSIILGEGAATGKGA
Ga0209698_1013999813300027911WatershedsMGYLEIVANRGAAAKATGAGKGAEVLLTLEGAAAAGRR
Ga0209168_1039273513300027986Surface SoilLGSMGYLEIASNRGMATQLAGAAKGAEVTIVLEGAVAANG
Ga0265354_101077513300028016RhizosphereILGSMGFLEIAVNRGAAAQVTGAGKGNEVSIILGEAAAAGKGA
Ga0265349_100453513300028037SoilLGSMGFLEIAANRGAAAQITGAGKGTDVTISLGEAAAAGKGA
Ga0302147_1016079513300028566BogIEIAANRGAAAQLTGAGKGSDVSIILGEGAAAGKGA
Ga0265338_1018701413300028800RhizosphereHGLSRDRANRAAAAQITGAGKGSEVTLFLGEAAAAGKGA
Ga0308309_1124508123300028906SoilGSMGFLEIAADRGSAAKIVGTGKGTEVLISLQGSSAASSGN
Ga0311371_1180093513300029951PalsaMGVLGSMGFLEIAANRGAAAQLTGAGKGTDVTIILGEAAAAGKGA
Ga0302304_1019012333300029993PalsaGILGSMGFLEIAANRGAAAQLTGAGKGSEVSIILGEAAAVGKGA
Ga0302304_1039319823300029993PalsaILGSMGYLEIAANRAAAAQITGAVKGSEVMITLSEGAAAGKGA
Ga0302270_1045950413300030011BogGILGSMGFLEIATNRGVAAQLTGASKGSEVTIVLGDGAAAGKGA
Ga0302177_1004271553300030053PalsaSMGYLEIAGNRAAAAQVTGAGKGSEVSIILGEGVAAGKGA
Ga0311353_1080400033300030399PalsaGFLEIAANRGAAAQLTGAGKGTDVTIILGEAAAAGKGA
Ga0302183_1021584333300030509PalsaILGSMGFLEIAANRGAAAQLTGAGKGSDVTIILGEAAAAGKGA
Ga0302275_1015113413300030518BogVGSMGYLELAANRGSAAQLLGIAKGAEVTLTLEQGNAASSGK
Ga0311355_1005524853300030580PalsaGSMGFLEIAVNRGAAAQLTGAGKGTDVTVILGEAAAAGKGA
Ga0265765_106558523300030879SoilLEIAANRGAAVQLTGIGKGSEISIILGEAAAAGKGA
Ga0170834_10114330813300031057Forest SoilMGYLEIAANRGTAAQLAGAAKGTEVTVVLEGAVAANG
Ga0265760_1011296133300031090SoilGSMGYLEIAANRAAAAQVTGAGKGSEVSIILGEGAAAGKGA
Ga0170824_11973918213300031231Forest SoilMGYLEIVANRASAAQITGAGKGSEVSIFLGEAAAAGKGA
Ga0302324_10080515813300031236PalsaLEIAANRGNAAQITGAGKGNEVSIILGEGAAAGKSA
Ga0170820_1313116823300031446Forest SoilLGSMGYLEIVANRGSAAQLVGSGKGTEVQLIFEGATAASNGQ
Ga0318528_1009622743300031561SoilLGSMGFLEIAANRGAAAQLLGVGKGTEVNIVLGGAAAAGQ
Ga0307476_1033596743300031715Hardwood Forest SoilSMGYLEIAANRAAAAQIVGAGKGSEVIIVLEGAVAASNGQ
Ga0307474_1005485513300031718Hardwood Forest SoilMGFLEIAANRGAAVQLTGAGKGSDVTIVLGEAAAAGKGA
Ga0307469_1019090743300031720Hardwood Forest SoilGSMGYLEIAADRGSAAKIIGSGKGTEVVVSLQGTAAASSGK
Ga0307475_1088228433300031754Hardwood Forest SoilLEIAANRAAAAQIIGSGKGSEVNIVLEGATAASNGQ
Ga0307475_1146210913300031754Hardwood Forest SoilGSMGFLEIAANRGAAAQLTGAGKGSEVSIILGGGAAAGKGA
Ga0318529_1002888143300031792SoilSMGFLEIAANRGAAAQLLGVGKGTEVNIVLGGAAAAGQ
Ga0318550_1061281823300031797SoilVILGSMGFLEIAANRGAAAQLLGVGKGTEVNIVLGGAAAAGQ
Ga0307478_1074524333300031823Hardwood Forest SoilLGSMGFLEIAANRGAAAQLTGAGKGNEVNIILGEAAAAGKG
Ga0306923_1138747513300031910SoilLLGSAGFLEISLNRGSASRMAGADKGTEVTVVLGGGH
Ga0307472_10209004213300032205Hardwood Forest SoilMGYLEIAADRGSAAKIIGSGKGSEVLLSFEGAAAAGSGN
Ga0348332_1026794733300032515Plant LitterEISANRGAAAQIIGASKGNEVVIVMEGAVAASNGQ
Ga0335085_1061363113300032770SoilYLEIVANRAPATQLTGAGKGAEVSIVLGDGAAAGKGA
Ga0335078_1014092153300032805SoilLGSMGYLEIVANRAAAAQITGASKGSEVSIVLGEASAAGKGA
Ga0335070_1084193323300032829SoilGSMGYIEIAANRGAAAQMLGVGKGSEVNLVLENVATAGNVQ
Ga0335081_1010241013300032892SoilGILGSMGYLEIAANRAPAAQLAGCGKGSEVTVVLEGAVAASNGQ
Ga0335072_1108723013300032898SoilLGSMGYLEIAANRAPANQITGANKGSEVSIVMGEAAAAGKSA
Ga0335083_1021283613300032954SoilGSMGYLEISTNRGSAAQAVGIGKGSDVSIILEGAAAAGNGQ
Ga0335077_1024176343300033158SoilILGSMGYLEIAANRASAAQLVGTGKGSEVTIALESAARASNGQ
Ga0326726_1162749723300033433Peat SoilSMGYLEIAANRTSAAQTIGVGKGSDVSVVLEGAAAAGNGQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.