Metagenome / Metatranscriptome Family F051325

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051325
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	65 residues
Representative Sequence	MSRKDELLKLAQLFHSQARRAGTPDVKRTLHRMGQYYQNEAAHAPDRHAERQRKLRQFNRYPEQAA
Number of Associated Samples	104
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.19 %
% of genes near scaffold ends (potentially truncated)	38.89 %
% of genes from short scaffolds (< 2000 bps)	89.58 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.806 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (31.944 % of family members)
Environment Ontology (ENVO)	Unclassified (35.417 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.111 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.26% β-sheet: 0.00% Coil/Unstructured: 45.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF03992	ABM	9.03
PF01493	GXGXG	1.39
PF04226	Transgly_assoc	1.39
PF13683	rve_3	1.39
PF03734	YkuD	0.69
PF12244	DUF3606	0.69
PF13419	HAD_2	0.69
PF13365	Trypsin_2	0.69
PF01068	DNA_ligase_A_M	0.69
PF07883	Cupin_2	0.69
PF06823	DUF1236	0.69
PF09361	Phasin_2	0.69
PF09837	DUF2064	0.69
PF00589	Phage_integrase	0.69
PF13714	PEP_mutase	0.69
PF07238	PilZ	0.69
PF01209	Ubie_methyltran	0.69
PF09864	MliC	0.69
PF10003	DUF2244	0.69
PF12071	DUF3551	0.69
PF04392	ABC_sub_bind	0.69
PF12200	DUF3597	0.69
PF00072	Response_reg	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.39
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.69
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.69
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.69
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.69
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.69
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.69
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.81 %
All Organisms	root	All Organisms	38.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.81 %
cellular organisms	root	All Organisms → cellular organisms	38.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.33 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.86 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.39 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.14 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.08 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.39 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.81 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	11.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.08 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.08 %
unclassified Spartobacteria	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria	1.39 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.69 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.81 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.08 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	2.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.08 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	1.39 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.69 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.69 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.81 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.81 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.08 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	1.39 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.69 %
Rhodopseudomonas rhenobacensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas rhenobacensis	0.69 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.81 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.81 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.08 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	1.39 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.69 %
Rhodopseudomonas rhenobacensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas rhenobacensis	0.69 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01BVM7O	Not Available	502	Open in IMG/M
2209111022\|2221226121	Not Available	563	Open in IMG/M
3300004479\|Ga0062595_100340229	Not Available	1038	Open in IMG/M
3300005093\|Ga0062594_101153923	Not Available	763	Open in IMG/M
3300005164\|Ga0066815_10000470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2599	Open in IMG/M
3300005294\|Ga0065705_10333135	Not Available	982	Open in IMG/M
3300005294\|Ga0065705_10905586	Not Available	574	Open in IMG/M
3300005295\|Ga0065707_10035819	Not Available	961	Open in IMG/M
3300005331\|Ga0070670_101167450	Not Available	703	Open in IMG/M
3300005439\|Ga0070711_101276296	Not Available	637	Open in IMG/M
3300005455\|Ga0070663_101825077	Not Available	545	Open in IMG/M
3300005535\|Ga0070684_100431441	Not Available	1217	Open in IMG/M
3300005577\|Ga0068857_100644035	Not Available	1004	Open in IMG/M
3300005713\|Ga0066905_100345172	Not Available	1187	Open in IMG/M
3300005937\|Ga0081455_10049516	All Organisms → cellular organisms → Bacteria → Proteobacteria	3621	Open in IMG/M
3300006049\|Ga0075417_10061025	Not Available	1650	Open in IMG/M
3300006049\|Ga0075417_10310480	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	766	Open in IMG/M
3300006175\|Ga0070712_100932819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	749	Open in IMG/M
3300006196\|Ga0075422_10204860	Not Available	812	Open in IMG/M
3300006196\|Ga0075422_10278618	Not Available	710	Open in IMG/M
3300006844\|Ga0075428_100852321	Not Available	967	Open in IMG/M
3300006844\|Ga0075428_100880139	Not Available	950	Open in IMG/M
3300006846\|Ga0075430_100066112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas rhenobacensis	3036	Open in IMG/M
3300006846\|Ga0075430_100573777	Not Available	930	Open in IMG/M
3300006852\|Ga0075433_10336863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	1333	Open in IMG/M
3300006854\|Ga0075425_100038938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5304	Open in IMG/M
3300006854\|Ga0075425_100091064	All Organisms → cellular organisms → Bacteria	3457	Open in IMG/M
3300006854\|Ga0075425_100107527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3177	Open in IMG/M
3300006871\|Ga0075434_100377956	Not Available	1437	Open in IMG/M
3300006880\|Ga0075429_100672902	Not Available	907	Open in IMG/M
3300006969\|Ga0075419_10090154	Not Available	1961	Open in IMG/M
3300007076\|Ga0075435_100426505	Not Available	1142	Open in IMG/M
3300009012\|Ga0066710_103063819	Not Available	648	Open in IMG/M
3300009094\|Ga0111539_10513582	Not Available	1396	Open in IMG/M
3300009147\|Ga0114129_10037658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6827	Open in IMG/M
3300009147\|Ga0114129_10898496	Not Available	1122	Open in IMG/M
3300009147\|Ga0114129_11256367	Not Available	920	Open in IMG/M
3300009147\|Ga0114129_11501608	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300009148\|Ga0105243_11940290	Not Available	622	Open in IMG/M
3300009156\|Ga0111538_10474862	Not Available	1585	Open in IMG/M
3300009168\|Ga0105104_10134630	Not Available	1334	Open in IMG/M
3300010043\|Ga0126380_11784563	Not Available	556	Open in IMG/M
3300010047\|Ga0126382_10297804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1209	Open in IMG/M
3300010154\|Ga0127503_10353465	Not Available	1275	Open in IMG/M
3300010154\|Ga0127503_10516127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	734	Open in IMG/M
3300010154\|Ga0127503_10929153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	790	Open in IMG/M
3300010400\|Ga0134122_10610553	Not Available	1009	Open in IMG/M
3300011003\|Ga0138514_100055832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300012198\|Ga0137364_10307902	Not Available	1177	Open in IMG/M
3300012208\|Ga0137376_10024642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4679	Open in IMG/M
3300012285\|Ga0137370_10726228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	617	Open in IMG/M
3300012519\|Ga0157352_1054753	Not Available	605	Open in IMG/M
3300012957\|Ga0164303_10254802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1008	Open in IMG/M
3300012960\|Ga0164301_11473831	Not Available	559	Open in IMG/M
3300012984\|Ga0164309_10223811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1310	Open in IMG/M
3300012986\|Ga0164304_11475898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	561	Open in IMG/M
3300012988\|Ga0164306_10939570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300014325\|Ga0163163_10250161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1823	Open in IMG/M
3300014969\|Ga0157376_11726722	Not Available	661	Open in IMG/M
3300015371\|Ga0132258_10528165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2955	Open in IMG/M
3300015374\|Ga0132255_101281867	Not Available	1105	Open in IMG/M
3300015374\|Ga0132255_101445195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1039	Open in IMG/M
3300018000\|Ga0184604_10075945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	992	Open in IMG/M
3300018054\|Ga0184621_10147008	Not Available	848	Open in IMG/M
3300018064\|Ga0187773_10234967	Not Available	994	Open in IMG/M
3300018066\|Ga0184617_1034518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1217	Open in IMG/M
3300018072\|Ga0184635_10203948	Not Available	788	Open in IMG/M
3300018073\|Ga0184624_10144028	Not Available	1044	Open in IMG/M
3300018076\|Ga0184609_10154294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1058	Open in IMG/M
3300018076\|Ga0184609_10240926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	845	Open in IMG/M
3300018081\|Ga0184625_10164058	Not Available	1161	Open in IMG/M
3300018081\|Ga0184625_10278313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	876	Open in IMG/M
3300019254\|Ga0184641_1245057	Not Available	523	Open in IMG/M
3300019868\|Ga0193720_1051904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	576	Open in IMG/M
3300019869\|Ga0193705_1043171	Not Available	946	Open in IMG/M
3300019879\|Ga0193723_1005365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4359	Open in IMG/M
3300019879\|Ga0193723_1190196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	520	Open in IMG/M
3300021951\|Ga0222624_1399219	Not Available	539	Open in IMG/M
3300022694\|Ga0222623_10016530	All Organisms → cellular organisms → Bacteria → Proteobacteria	2728	Open in IMG/M
3300022694\|Ga0222623_10036835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1871	Open in IMG/M
3300022694\|Ga0222623_10056820	All Organisms → cellular organisms → Bacteria → Proteobacteria	1508	Open in IMG/M
3300022756\|Ga0222622_10426785	Not Available	937	Open in IMG/M
3300022756\|Ga0222622_11383524	Not Available	518	Open in IMG/M
3300025915\|Ga0207693_11156523	Not Available	585	Open in IMG/M
3300025916\|Ga0207663_10615948	Not Available	854	Open in IMG/M
3300025986\|Ga0207658_11086549	Not Available	731	Open in IMG/M
3300026095\|Ga0207676_11314958	Not Available	718	Open in IMG/M
3300027873\|Ga0209814_10353824	Not Available	643	Open in IMG/M
3300027873\|Ga0209814_10514475	Not Available	531	Open in IMG/M
3300027880\|Ga0209481_10068787	Not Available	1670	Open in IMG/M
3300027880\|Ga0209481_10123928	Not Available	1262	Open in IMG/M
3300027907\|Ga0207428_10074160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2668	Open in IMG/M
3300027909\|Ga0209382_11738165	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300028711\|Ga0307293_10025910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1753	Open in IMG/M
3300028711\|Ga0307293_10298929	Not Available	511	Open in IMG/M
3300028715\|Ga0307313_10288402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	511	Open in IMG/M
3300028716\|Ga0307311_10032924	Not Available	1340	Open in IMG/M
3300028716\|Ga0307311_10123077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	736	Open in IMG/M
3300028717\|Ga0307298_10270030	Not Available	507	Open in IMG/M
3300028719\|Ga0307301_10190367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	665	Open in IMG/M
3300028720\|Ga0307317_10344438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	504	Open in IMG/M
3300028768\|Ga0307280_10292071	Not Available	593	Open in IMG/M
3300028784\|Ga0307282_10182584	Not Available	1000	Open in IMG/M
3300028784\|Ga0307282_10235847	Not Available	877	Open in IMG/M
3300028784\|Ga0307282_10438684	Not Available	633	Open in IMG/M
3300028787\|Ga0307323_10021197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2225	Open in IMG/M
3300028787\|Ga0307323_10363068	Not Available	519	Open in IMG/M
3300028791\|Ga0307290_10055058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1435	Open in IMG/M
3300028793\|Ga0307299_10029200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1999	Open in IMG/M
3300028793\|Ga0307299_10134858	Not Available	927	Open in IMG/M
3300028799\|Ga0307284_10256438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300028807\|Ga0307305_10096186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1368	Open in IMG/M
3300028811\|Ga0307292_10221472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	781	Open in IMG/M
3300028814\|Ga0307302_10707011	Not Available	501	Open in IMG/M
3300028819\|Ga0307296_10336730	Not Available	824	Open in IMG/M
3300028819\|Ga0307296_10655540	Not Available	574	Open in IMG/M
3300028824\|Ga0307310_10105255	Not Available	1260	Open in IMG/M
3300028878\|Ga0307278_10352033	Not Available	649	Open in IMG/M
3300028878\|Ga0307278_10427702	Not Available	581	Open in IMG/M
3300030829\|Ga0308203_1058732	Not Available	597	Open in IMG/M
3300030829\|Ga0308203_1096666	Not Available	502	Open in IMG/M
3300031114\|Ga0308187_10042457	Not Available	1213	Open in IMG/M
3300031170\|Ga0307498_10000110	All Organisms → cellular organisms → Bacteria → Proteobacteria	9063	Open in IMG/M
3300031170\|Ga0307498_10012085	Not Available	1763	Open in IMG/M
3300031170\|Ga0307498_10056610	Not Available	1081	Open in IMG/M
3300031170\|Ga0307498_10302904	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300031170\|Ga0307498_10398599	Not Available	540	Open in IMG/M
3300031170\|Ga0307498_10445791	Not Available	518	Open in IMG/M
3300031200\|Ga0307496_10128093	Not Available	522	Open in IMG/M
3300031226\|Ga0307497_10184381	Not Available	892	Open in IMG/M
3300031231\|Ga0170824_104585778	Not Available	2114	Open in IMG/M
3300031231\|Ga0170824_116192987	Not Available	572	Open in IMG/M
3300031446\|Ga0170820_12136161	Not Available	544	Open in IMG/M
3300031562\|Ga0310886_10647611	Not Available	653	Open in IMG/M
3300031847\|Ga0310907_10266454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	849	Open in IMG/M
3300031847\|Ga0310907_10711247	Not Available	556	Open in IMG/M
3300031892\|Ga0310893_10525451	Not Available	534	Open in IMG/M
3300032211\|Ga0310896_10074327	Not Available	1451	Open in IMG/M
3300033433\|Ga0326726_10434946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1248	Open in IMG/M
3300033433\|Ga0326726_10712630	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300034090\|Ga0326723_0068180	Not Available	1517	Open in IMG/M
3300034090\|Ga0326723_0192875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300034090\|Ga0326723_0533187	Not Available	540	Open in IMG/M
3300034819\|Ga0373958_0103425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.53%
Host-Associated	Host-Associated	28.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.64%
Plants	Host-Associated → Plants	28.47%
Aquatic	Environmental → Aquatic	13.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.61%
Sediment	Environmental → Aquatic → Sediment	9.72%
Freshwater	Environmental → Aquatic → Freshwater	4.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.17%
Peat	Environmental → Terrestrial → Peat	3.47%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.69%
Roots	Host-Associated → Plants → Roots	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.72%
Loam	Environmental → Terrestrial → Soil → Loam	4.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.47%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.78%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.08%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.69%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.47%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.08%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.69%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	31.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	19.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.25%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.47%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.08%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.08%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.08%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.39%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.69%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.69%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_4225600	2040502001	Soil	MARKDELLKLAQLFHSQARRAGTPAVKRTLHRMGDDYQNEAAHAPDRDAERQRKLRQFNRYPEQAAMSQ
2222078126	2209111022	Grass Soil	MSRKQELLKLAKLFHSQASRTGTPGVKQTLHRMGQYYQNEAAHAPDRDPERQRGPRQFNRYPEQAA
Ga0062595_1003402292	3300004479	Soil	MSRKDELLKLAQLFHSQARRAGTPDVKRTLHSMGQYYQNEAAHAPDRYAERQRKLRQFNRYPEQAA*
Ga0062594_1011539231	3300005093	Soil	MSRKDELLKLAQVFHFEARRAQTPSVKRTLHKMGQYYQNEAVHASDRGAERQRKLKQFNRYPEQAA*
Ga0066815_100004701	3300005164	Soil	MSRKDELLKLAELFHLQALRTGTPAVKQTLHRMGQYYRNEAAHAPDRDAERHRRL
Ga0065705_103331352	3300005294	Switchgrass Rhizosphere	MSRKDELLKLAQLFHSQARRAGTPDVKRTLHRMGQYYQNEAAHAPDRYAERQRKLRQFNRYPEQAA*
Ga0065705_109055862	3300005294	Switchgrass Rhizosphere	MSRKDELLKLAQVFHFEARRAQTPSVKRTLHKMGQHYQNEAVHASDRGAERQRKLKQFNRYPEQAA*
Ga0065707_100358192	3300005295	Switchgrass Rhizosphere	MSRKDELLKLAQLFHSQARRAGTPDVKRTLHRMGQYYQNEAAHAPDRDPERQRKLRQFNRYPEQAA*
Ga0070670_1011674502	3300005331	Switchgrass Rhizosphere	TMSRKDELLKLAQVFHFEARRAQTPSVKRTLHKMGQHYQNEAVHASDRGAERQRKLKQFNRYPEQAA*
Ga0070711_1012762961	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSRKDELLKLAQLFHSQATRAGTPDVKRTLHRMGQYYQNEAAHAPDRDPERQRKL
Ga0070663_1018250771	3300005455	Corn Rhizosphere	ESKAPCRKDELLKLAQVFHFEARRAQTPSVKRTLHKMGQYYQNEAVHASDRGAERQRKLKQFNRYPEQAA*
Ga0070684_1004314413	3300005535	Corn Rhizosphere	MSRKAELLKLAQLFHSQAGRIGTPAVKQTLHRMGQYYQDEAAHAPDRYSERQRKLRRFSRYPEQAA*
Ga0068857_1006440353	3300005577	Corn Rhizosphere	MSRKDELLKLAQVFHFEARRAQTPSIKRTLHKMGQYYQNEAVHASDRGAERQRKLKQFNRYPEQAA*
Ga0066905_1003451723	3300005713	Tropical Forest Soil	ELLKLARLFDLQAGRMETRAAKQTLLRMGQYYRNEAAHAPDRNAERQRKLRQFNRYPEQAA*
Ga0081455_100495164	3300005937	Tabebuia Heterophylla Rhizosphere	MSRKDELLKLARLFDLQAGRMETRAAKQTLRRMGQYYQNEAAHAPDRDAERKRKLR*
Ga0075417_100610253	3300006049	Populus Rhizosphere	MSRKDELLKLAQLFHSQARRAETPDAKRTLYRMGQYYQNEAAHAPDRPAERQRKLRQFNRYPEQAA*
Ga0075417_103104802	3300006049	Populus Rhizosphere	MSRKDELLKLARLFDLQAGRMETRAAKQTLLRMGQYYQNEAAHAPDRDAERKRKLRQFNRYPEQAA*
Ga0070712_1009328191	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSRKDELLKLAKLFHSQASRTGTPDVKQRLLRMGQYYQNEAAHASDRHADQQRTLKRVNRYPERAA*
Ga0075422_102048601	3300006196	Populus Rhizosphere	MSRKDELLKLAQLFHSQARRAGTPAVKRTLHRMGQYYQNEAAHAPDRHAERQRKLRQFNRYPEQAA*
Ga0075422_102786182	3300006196	Populus Rhizosphere	MSRKDELLKLAQLFHSQARRAGTPDVKRTLHRMGQYYQNEAAHAPDRYAERQRKLRQFNRYP
Ga0075428_1008523212	3300006844	Populus Rhizosphere	MSRKDELLKLAELFHSQARRTGTTAVKQTLDRMGQYYQNEAARALDRGAERQRKLRQFKRYPEQAA*
Ga0075428_1008801393	3300006844	Populus Rhizosphere	MSRKDELLKLARLFDLQAGRMETRAAKQTLLRMGQYYQNEAAHAPDRHAERQRKLRQFNRYPEQAA*
Ga0075430_1000661121	3300006846	Populus Rhizosphere	MSRKDELLKLAQLYHSQARRAGTPTVKRTLHRMGEHYQNEAAQAPDRHAERQRKLRQFNRYPEQAA*
Ga0075430_1005737771	3300006846	Populus Rhizosphere	LKLAQLFHSQARRAGTPDVKRTLHRMGQYYQNEAAHAPDRYAERQRKLRQFNRYPEQAA*
Ga0075433_103368633	3300006852	Populus Rhizosphere	RKDELLKLARLFDLQAGRMETRAAKQTLLRMGQYYQNEAAHAPDRDAERKRKLRQFNRYPEQAA*
Ga0075425_1000389383	3300006854	Populus Rhizosphere	MSRKDELLKLAQLFHSQATRAGTPDVKRTLHRMGQYYQNEAAHAPDRDPERQRKLRQFNRYPEQAA*
Ga0075425_1000910648	3300006854	Populus Rhizosphere	MSRKDELLKLAELFHSQARRTGTTAVKQTLDRMGQYYHNEAARALDRGAERQRKLRQFKRYPEQAA*
Ga0075425_1001075275	3300006854	Populus Rhizosphere	MSRKDELLKLAQLFHSQAHRAGTPAVKRTLHRMGQYYQNEAAHAPDRHAERQRKLRQFNRYPEQAA*
Ga0075434_1003779561	3300006871	Populus Rhizosphere	RKDELLKLAQLFHSQARRAETPDAKRTLYRMGQYYQNEAAHAPDRPAERQRKLRQFNRYPEQAA*
Ga0075429_1006729022	3300006880	Populus Rhizosphere	MSRKDELLKLAELFHSQARRTGTTAVKQTLDRMGQYYRNEAARALDRGAERQRKLRQFKRYPEQAA*
Ga0075419_100901542	3300006969	Populus Rhizosphere	MSRKDELLKLAQLFHSQARRAGTPDVKRTLHRMGQYYQNEAAHAPDRHAERQRKLRQFNRYPEQAA*
Ga0075435_1004265052	3300007076	Populus Rhizosphere	MSRKDELLKLAQFFHSQALRAQTPDAKRTLHRMGKYYQNEAAHALDRRAERQRKLKQFNRYPEQAA*
Ga0066710_1030638191	3300009012	Grasslands Soil	MARKDELLRLAELFHSQARRTETPAVKQTLHRMGQYYQNEAAHAPDRDAERQRKLRQLNRYPEQAA
Ga0111539_105135822	3300009094	Populus Rhizosphere	FHSQARRAETPDAKRTLYRMGQYYQNEAAHAPDRPAERQRKLRQLNRYPEQAA*
Ga0114129_100376587	3300009147	Populus Rhizosphere	MSRKDELLKLAQLFHSQARRAETPDAKRTLYRMGQYYQNEAAHAPDRPAERQRKLRQLNRYPEQAA*
Ga0114129_108984961	3300009147	Populus Rhizosphere	TEGSTMSRKDELLKLAELFHSQARRTGTTAVKQTLDRMGQYYRNEAARALDRGAERQRKLRQFKRYPEQAA*
Ga0114129_112563671	3300009147	Populus Rhizosphere	DELLKLAELFHSQARRTGTTAVKQTLDRMGQYYQNEAARALDRGAERQRKLRQFKRYPEQAA*
Ga0114129_115016081	3300009147	Populus Rhizosphere	TEGSTMSRKDELLKLAELFHSQARRTGTTAVKQTLDRMGQYYHNEAARALDRGAERQRKLRQFKRYPEQAA*
Ga0105243_119402901	3300009148	Miscanthus Rhizosphere	MSRKAELLKLAQLFHSQAGRIGTPAVKQTLHRMGQYYQDEAAHAPDRYSERQRKL
Ga0111538_104748622	3300009156	Populus Rhizosphere	MSRKDELLKLAQVFHFEARRAQTPSVKRTLHKMGQYYQNEAAHASDRGAERQRKLKQFNRYPEQAA*
Ga0105104_101346302	3300009168	Freshwater Sediment	MSRKDELLKLAELFHSQARRTGTTAVKQTLDRMGRYYQNEAARALDRGAERQRKLRQFKRYPEQAA*
Ga0126380_117845631	3300010043	Tropical Forest Soil	MSRKDELLKLARLFDLQAGRMETRAAKQTLLRLGQYYQNEAAHAPDRDAERQRKLRQFNRYPEQAA*
Ga0126382_102978042	3300010047	Tropical Forest Soil	MSRKDELLKLARLFDLQAGRMETRTEKQTLRRMGQYYQNEAAHAPDRDAERKRKLRQFNRYPEQAA*
Ga0127503_103534653	3300010154	Soil	MSRKDELLKLAQVFHFEARRVQTPSVKRTLHKMGQYYQNEAVHAPDRGAERQRKLKQFNRYPEQAA*
Ga0127503_105161272	3300010154	Soil	MSRKDELLKLAQVFHSQALRAETPDAKRTLHRMGQYYQNEAAHAPDRRAEQQRKLRQFNSYPEQAT*
Ga0127503_109291531	3300010154	Soil	MSRKDELLKLAQLFHSQAGRTGTRAVKQMLLRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA*
Ga0134122_106105532	3300010400	Terrestrial Soil	MSRKDELLKLAQVFHFEARRAQTPSVKRTLHKMGKYYQNEAVHASDRGAERQRKLKQFNRYPEQAA*
Ga0138514_1000558322	3300011003	Soil	MSRKDELLKLAQLFHSQALRAETPDAKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA*
Ga0137364_103079022	3300012198	Vadose Zone Soil	MSRKDELLKLAQVFHSQARRAETPGVKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA*
Ga0137376_1002464211	3300012208	Vadose Zone Soil	MSRKDELLKLAQVFHSQARRAETPGVKRTLHRMGQYYQNEAAHAPDRRAERQRKLSQFNRYPEQAA*
Ga0137370_107262281	3300012285	Vadose Zone Soil	ATMSRKDELLKLAQVFHSQARRAETPGVKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA*
Ga0157352_10547531	3300012519	Unplanted Soil	MSRKDELLKLAQVFHFEARRAQTPSIKRTLHKMGQYYQNEAVHAPDRRAEQQRKLRQFNRYPEQAA*
Ga0164303_102548021	3300012957	Soil	MSRKDELLKLAQLFHSQVGRTGTRAVKQMLLRMGQYYQNEAAHAPDRRAEQQRKLRQFNRYPEQAA*
Ga0164301_114738311	3300012960	Soil	MARKDELLKLAELFHSQARRTKTPAVNQTLHIMGQYYKSEAAHAPDRRAERQRM*
Ga0164309_102238112	3300012984	Soil	ELLKLAQLFHSQVGRTGTRAVKQMLLRMGQYYQNEAAHAPDRRAEQQRKLRQFNRYPEQAA*
Ga0164304_114758981	3300012986	Soil	DELLKLADLFHSQARRTGTPAVKQTLHRMGQYYQSEAAHAPDRRAERQRKLRQFNRYPEQAA*
Ga0164306_109395701	3300012988	Soil	KDELLKLGELFQSQASRTRTPAVKRTLHRMGQYYQNEAAHAPNRDAERQRKLRQFNRYPEQAA*
Ga0163163_102501612	3300014325	Switchgrass Rhizosphere	MSRKDELLKLAQLFHSQATRAGTPDVKRTLHRMGQYYQDEAAHAPDRYSERQRKLRRFSRYPEQAA*
Ga0157376_117267221	3300014969	Miscanthus Rhizosphere	MSRKDELLKLAQLFHSQATRAGTPDVKRTLHRMGQYYQNEADHAPDRDPERQRKLRQFNRYPEQAA*
Ga0132258_105281654	3300015371	Arabidopsis Rhizosphere	MSRKDELLKLAELFHLQALRTGTPAVKQTLHRMGQYYRNEAAHAPDRDAERHRRLKEFNRYPERAA*
Ga0132255_1012818671	3300015374	Arabidopsis Rhizosphere	KAELLKLAQLFHSQAGRIGTPAVKQTLHRMGQYYRNEAAHAPDRDAERHRRLKEFNRYPEQAA*
Ga0132255_1014451951	3300015374	Arabidopsis Rhizosphere	ELLKLAQVFHFEARRAQTPSVKRTLHKMGQYYQNEAVHAPDRRAEQQRKLRQFNRYPEQAA*
Ga0184604_100759453	3300018000	Groundwater Sediment	LAQVFHSQARRAETPGVKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA
Ga0184621_101470081	3300018054	Groundwater Sediment	MSRKDELLKLAQLFHSQALKAETPDAKRTLHRMGQCYQNEAAHAPDRRAERQRKLRQFNRYPEQAA
Ga0187773_102349671	3300018064	Tropical Peatland	MSRKDELLKLAMLLHSQASRSETRAVKKTLNRVGEYYRNEAAHASDSLAERRRPSRRFNRDPKQAA
Ga0184617_10345182	3300018066	Groundwater Sediment	MSRKDELLKLAQLFHSQARRAGTPAVKQTLHRMGQYYQNEAAHAPDRHAERQRKLRQFNRYPEQAA
Ga0184635_102039481	3300018072	Groundwater Sediment	MARKDELLKLAELFHSQARRTGTPAVKQTLHRMGQYYQNEAAHAPDRDAERQRKLRQFNRYPEQA
Ga0184624_101440283	3300018073	Groundwater Sediment	MSRKDELLKLAQVFHSQARRAETPDVKRTLHRMGQCYQNEAAHAPDRDPERQRKLRQF
Ga0184609_101542943	3300018076	Groundwater Sediment	DAERHRGEWPTGLKTRGSKAAMSRKEELLKLAKLFNSQASRTGTPGVKQTLHRMGQYYQNEAAHAPDRDPERQRGPRQFNRYPEQAA
Ga0184609_102409261	3300018076	Groundwater Sediment	QLFHSQALRAETPDGKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA
Ga0184625_101640582	3300018081	Groundwater Sediment	MSRKDELLKLAQLFHWQARIAGTPAVKRTLYRMGQYYQNEAAHAPDRHAERQRKLRQFNRYPEQAA
Ga0184625_102783131	3300018081	Groundwater Sediment	MARKDELLKLAELFHSQARRTGTPAVKQTLHRMGQYYQNEAAHAPDRDAERQRKLRQFNRYPEQAA
Ga0184641_12450571	3300019254	Groundwater Sediment	MSRKDELLKLAQVFHLQARRAETPGVKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA
Ga0193720_10519042	3300019868	Soil	TMSRRDELLKLAQLFHSQALRAETPDAKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA
Ga0193705_10431713	3300019869	Soil	MSRKDELLKLAQVFHSQARRAETPGVKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA
Ga0193723_10053654	3300019879	Soil	MFRKDELLKLAKLFHSQASRTGTPDVKQRLLRMGQYYQNEAAHASDRHADQQRTLKRVNRYPERAA
Ga0193723_11901961	3300019879	Soil	SKATMSRKDELLKLAQLFDSQARRAETPDVKRTLHRMGQCYQNEAAHAPDQHVERQRKLRQFNRYPEQAA
Ga0222624_13992191	3300021951	Groundwater Sediment	EELLKLAKLFHSQASRTGTRGVKQTLHRMGQYYQNEAARAPDRDPERQRGPRQFNRYPEQAA
Ga0222623_100165305	3300022694	Groundwater Sediment	MARKDELLKLAELFHSQARRTGTPAVKQTLHRMGQYYQNEAAHAPDRYAERKRKLRQFNRYPEQAA
Ga0222623_100368352	3300022694	Groundwater Sediment	MSRKDELLMLAQLFHSQAGKTETRAVKQTLLRIGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA
Ga0222623_100568203	3300022694	Groundwater Sediment	ELLKLAQVFHSQARRAETPGVKRTLHRMGQYYQNEAAHAPDRYTERQRKLRQFSRYPEQA
Ga0222622_104267853	3300022756	Groundwater Sediment	MSRRDELLKLAQLFHSQALRAETPDAKRTLHRMGQYYQNEATHAPDRRAERQRKLGQF
Ga0222622_113835242	3300022756	Groundwater Sediment	MSRKEELLKLAKLFHSQASRTGTPGVKQTLHRMGQYYQNEAAHAPDRDPERQRGPRQLNRYPEQA
Ga0207693_111565231	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSRKDELLKLAQLFHSQATRAGTPDVKRTLHRMGQYYQNEAAHAPDRDPERQRKLRQFN
Ga0207663_106159481	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSRKDELLKLAQLFHSQATRAGTPDVKRTLHRMGQYYQNEAVHASDRGAERQRKLKQFNRYPEQAA
Ga0207658_110865491	3300025986	Switchgrass Rhizosphere	MSRKAELLKLAQLFHSQAGRIGTPAVKQTLHRMGQYYRNEAAHAPDRDTERHRRLKEFNR
Ga0207676_113149583	3300026095	Switchgrass Rhizosphere	ILRRAGLKDRKSSTMSRKDELLKLAQVFHFEARRAQTPSVKRTLHKMGQYYQNEAVHASDRGAERQRKLKQFNRYPEQAA
Ga0209814_103538241	3300027873	Populus Rhizosphere	MSRKDELLKLARLFDLQAGRMETRAAKQTLLRMGQYYQNEAAHAPDRHAERQRKLRQFNRYPEQAA
Ga0209814_105144751	3300027873	Populus Rhizosphere	MSRKDELLKLAQLYHSQARRAGTPTVKRTLHRMGEHYQNEAAQAPDRHAERQRKLRQFNRYPEQAA
Ga0209481_100687873	3300027880	Populus Rhizosphere	MSRKDELLKLAQLFHSQARRAETPDAKRTLYRMGQYYQNEAAHAPDRPAERQRKLRQFNRYPEQAA
Ga0209481_101239281	3300027880	Populus Rhizosphere	MSRKDELLKLAQLFHSQARRAGTPDVKRTLHRMGQYYQNEAAHAPDRYAERQRKLRQFNRYPEQA
Ga0207428_100741602	3300027907	Populus Rhizosphere	MSRKDELLKLAQLFHSQARRAGTPDVKRTLHRMGQYYQNEAAHAPDRYAERQRKLRQFNRYPEQAA
Ga0209382_117381652	3300027909	Populus Rhizosphere	MSRKDELLKLAELFHSQARRTGTTAVKQTLDRMGQYYRNEAARALDRGAERQRKLRQFKRYP
Ga0307293_100259105	3300028711	Soil	MSRKDELLKLAQLFHSQALRAETPDAKRTLHRMGQYYQNEAAYAPDRRAERQRKLRQFNRYPEQAA
Ga0307293_102989291	3300028711	Soil	SRKHELLKLADLFHSQASRAGTPAVKQTLHRMSQYYQNEAAQAPDRGPERQRRLRQFNRYPEQAA
Ga0307313_102884021	3300028715	Soil	MSRKDELLKLAQMFHSQARRAETPGVKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA
Ga0307311_100329241	3300028716	Soil	MSRKEELLKLAKLFHSQASRTGTPGVKQTLHRMGQYYQNEAAHAPDRDPERQRGPRQFNRYPEQAA
Ga0307311_101230771	3300028716	Soil	TMSRKDELLKLAQVFHSQARRAETPGVKRTLHRMGQYYQNEAAHAPDRHAERQRKLRQFNRYPEQAA
Ga0307298_102700301	3300028717	Soil	MSRKDELLKLAQLFQSQARRAETPDIKRTLHRMGQYYQNEAAHALDRHGERQRKLR
Ga0307301_101903671	3300028719	Soil	TMSRKDELLKLAQLFHSQALRAETPDAKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA
Ga0307317_103444381	3300028720	Soil	IFRRAWAKNQGSKATMSRKDELLKLAQLFHSQALKAETPDAKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA
Ga0307280_102920711	3300028768	Soil	MARKDELLKLAELFHSQARRTKTPAVKQTLHRMGQYYQNEAAHAPDRDTERQQQLRQYNRYPEQAA
Ga0307282_101825843	3300028784	Soil	ELLKLAQLFHSQALRAETPDAKRTLHRMGQYYQNEATHAPDRRAERQRKLGQFNRYPEQA
Ga0307282_102358471	3300028784	Soil	MSRKDELLKLAQLFQSQARRAGTPDVKRTLHRMGQYYQNEAAHAPDRYTERQRKL
Ga0307282_104386841	3300028784	Soil	MSRKDELRKLAQLLHSQALRAETPDAKRTLHRMGQYYQNEAAHAPDRPAERQRKLRQFNRYPEQAA
Ga0307323_100211972	3300028787	Soil	MSRRDELLKLAQLFHSQALRAETPDAKRTLHRMGQYYQNEATHAPDRRAERQRKLGQFNRYPEQAA
Ga0307323_103630681	3300028787	Soil	MSRKDELLKLAQLFHSQALRAETPDAKRTLHRMGQYYQNEAAHAPDRRAERQRKLR
Ga0307290_100550582	3300028791	Soil	MSRKDELLKLAQLFHSQARRAGTPDVKRTLHRMGQYYQNEAAHTPDRYTERQRKLRQFSRYPEQAA
Ga0307299_100292005	3300028793	Soil	MSRKDELLKLAQLFHSQALRAETPDAKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA
Ga0307299_101348582	3300028793	Soil	MSRKDELLKLAQLFHSQARRAGTPDVKQTLHRMGQYYQNEAAHAPDRDAEQQRRPRPFNRYPEQAA
Ga0307284_102564381	3300028799	Soil	KATMSRKDELLKLAQVFHSQARRAETPGVKRTLHRMGQYYQNEAAHAPDRYTERQRKLRQFSRYPEQAA
Ga0307305_100961864	3300028807	Soil	KVTMSRKDELLKLAQLFHSQALRAETPDAKRTLHRMGQYYQNEAAYAPDRRAERQRKLRQFNRYPEQAA
Ga0307292_102214722	3300028811	Soil	MSRKDELLKLAQLFQSQARRAETPDIKRTLHRMGQYYQNEAAHALDRHGERQRKLRQFNRYPEQAA
Ga0307302_107070111	3300028814	Soil	MSRKDELLKLAQLFHSQALRAKTPDAKRTLHRMGQYYQSEAAHAPDRHAERQRKLRQFNRYPEQAA
Ga0307296_103367302	3300028819	Soil	MSRKHELLKLADLFHSQASRAGTPAVKQTLHRMSQYYQNEAAQAPDRDPERQRRLRQFNRYPEQAA
Ga0307296_106555402	3300028819	Soil	TMSRKDELLKLAQLFHSQALRAETPDAKRTLHRMGQYYQNEATHAPDRRAERQRKLGQFNRYPEQAA
Ga0307310_101052553	3300028824	Soil	MSRKDELLKLAQLFHSQALRAETPDAKRTLHRMGQYYQNEATHAPDRRAERQRKLGQFNRYPEQAA
Ga0307278_103520332	3300028878	Soil	MSRKDELLKLAQLFHSQARRAETPDAKRTLHRMGQYYQNEAAHAPDRHAERQRKLRQFNRYPEQAA
Ga0307278_104277021	3300028878	Soil	MARKDELHKLAELFHSQARRTGTPAVKQTLHRMGQYYQNEAAHAPDRDPERQR
Ga0308203_10587322	3300030829	Soil	LEGSKAAMSRKEELLKLAKLFHSQASRTGTRGVKQTLHRMGQYYQNEAARAPDRDPERQRGPRQFNRYPEQAA
Ga0308203_10966661	3300030829	Soil	LEGSKAAMSRKEELLKLAKLFHSQASRTGTPGVKQTLHRMGQYYQNEAAHAPDRDTERQQQLRQLNRYPEQAA
Ga0308187_100424571	3300031114	Soil	MSRKDELLKLAQVFHLQARRAETPGVKRTLHRMGQYYQNEAAHAPDRPAERQRKLRQFNRYPEQAA
Ga0307498_1000011010	3300031170	Soil	MSRKVELLKLAKLFHSQASRTATPGVKQTLHRMGQYYQNEAAHAPDRDPERQRGPTRLYRYPEQAA
Ga0307498_100120853	3300031170	Soil	MARKDELLKLAQLFHSQARRTETPAVKQTLHRMGQYYQNEAAHAPDHDAERQRQLRQLNRYPEQAA
Ga0307498_100566101	3300031170	Soil	MSRKDELRKLAQLLHSQALRAETRDAKRTLHRMGQYYQNEAAHAPDRPAERQRKLRQFNRYPEQAA
Ga0307498_103029042	3300031170	Soil	MARKDELLKLAELFHSQARRTETPAVKQTLHRMGQYYKNEAAHAPDRDTERQRQLRQLNRYPEQAA
Ga0307498_103985991	3300031170	Soil	LLKLAKLFHSQASRTGTPGVKQTLHRMGQYYQNEAAHAPDRDPERQRGRPRQFNRYPEQA
Ga0307498_104457911	3300031170	Soil	MSRKDELLKLAQVFHFEARRAQTPSVKRTLHKMGQYYQNEAVHASDRGAERQRKL
Ga0307496_101280932	3300031200	Soil	MSRKDELRKLAQLLHSQALRAETPDAKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA
Ga0307497_101843813	3300031226	Soil	MNKSGRHIFRRAWVKNKGSKATMSRKDELLKLAQLFHSQALRAETPDAKRTLHRMGQYYQNEAAHAPDRRAERQRKLRQFNRYPEQAA
Ga0170824_1045857783	3300031231	Forest Soil	MSRKDELLKLAQLFHSQARRAETPDAKRALHRMGQYYQNEAAHAPDRHAERQRKLRQFNRYPEQAA
Ga0170824_1161929871	3300031231	Forest Soil	MSRKEELLKLAKLFHSQASRTGTPGVKQTLHRMGQYYQNEAAHAPDRDPERQRGRRQFNRYPEQAA
Ga0170820_121361611	3300031446	Forest Soil	MSRKEELLKLAKLFHSQASRTRTPGVKQTLHRMGQYYQNEAAHAPDRDPERQRGRRQFNRYPEQAA
Ga0310886_106476113	3300031562	Soil	GGSKAAMSRKNELLKLAELFHLQALRTGTPAVKQTLHRMGQYYRNEAAHAPDRDVERHRSLKEFSRHPEQAA
Ga0310907_102664541	3300031847	Soil	TMSRKDELLKLAQVFHFEARRAQTPSVKRTLHKMGQYYQNEAVHASDRGAERQRKLKQFNRYPEQAA
Ga0310907_107112472	3300031847	Soil	MSRKDELLKLAELFHLQALRTGTPAVKQTLHRMGQYYRNEAAHAPDRDVERHRSLKEFSRHPEQAA
Ga0310893_105254512	3300031892	Soil	MSRKDELLKLAQVFHFEARRAQTPSVKRTLHKMGQYYQNEAIHASDRGAERQRKLKQFNRYPEQAA
Ga0310896_100743271	3300032211	Soil	MSRKNELLKLAELFHLQALKTGTPAVKQTLHRMGQYYRNEAAHAPDRDVERHRSLKEFSRHPEQAA
Ga0326726_104349462	3300033433	Peat Soil	MSRKNELLKLAMVFHLEARRAQTPAAKRTLHRMGQYYEKEAVHAPDFDAERHRRPKEFNRSRGGLAA
Ga0326726_107126301	3300033433	Peat Soil	MSRKDELLKLSELFHLQANRAGTPAVKQTLRRIGQHCQNEAAHASDRGAERQRRLKQLNRYPK
Ga0326723_0068180_1106_1306	3300034090	Peat Soil	MSRKDELLKLAELFHSQASRTGTPAVKKTLHRMGQYYRNEAAHAPDRDPERQRRLKQFNRYPEQAA
Ga0326723_0192875_103_303	3300034090	Peat Soil	MSRKDELLKLSELFHLQASRAATPAVKQTLRRIGQHCQNEAAHASDRGAERQRRLKQLNRYPKQAA
Ga0326723_0533187_311_511	3300034090	Peat Soil	MSRKDELLKLAELFHLQASRAGTRAAKRTLRRMGQHYQNEAAHASDRGAERQRRLKQLNRYPKQAA
Ga0373958_0103425_373_573	3300034819	Rhizosphere Soil	MSRKAELLKLAQLFHSQATRAGTPDVKRTLHRMGQYYQNEAAHAPDRDPERQRKLRQFNRYPEQAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051325

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences