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Sample 3300030719
3300030719: Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - UN-2 (Metagenome Metatranscriptome)
Overview
Basic Information |
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IMG/M Taxon OID | 3300030719 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0135150 | Gp0323847 | Ga0307926 |
Sample Name | Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - UN-2 (Metagenome Metatranscriptome) |
Sequencing Status | Permanent Draft |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Published? | N |
Use Policy | Open |
Dataset Contents |
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Total Genome Size | 51523379 |
Sequencing Scaffolds | 6 |
Novel Protein Genes | 8 |
Associated Families | 7 |
Dataset Phylogeny |
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Taxonomy Groups | Number of Scaffolds |
Not Available | 2 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 1 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 1 |
All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon | 1 |
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium B3_Pla | 1 |
Ecosystem and Geography
Ecosystem Assignment (GOLD) |
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Name | Soil Microbial Communities From Risofladan, Vaasa, Finland |
Type | Environmental |
Taxonomy | Environmental → Terrestrial → Soil → Clay → Unclassified → Soil → Soil Microbial Communities From Risofladan, Vaasa, Finland |
Alternative Ecosystem Assignments |
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Environment Ontology (ENVO) | terrestrial biome → land → soil |
Earth Microbiome Project Ontology (EMPO) | Unclassified |
Location Information |
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Location | Finland: Risofladan, Vaasa |
Coordinates | Lat. (o) | 63.0472 | Long. (o) | 21.7116 | Alt. (m) | N/A | Depth (m) | 1 |
Location on Map |
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Associated Families
Associated Scaffolds
Sequences