Sample 3300029856

Basic Information
IMG/M Taxon OID	3300029856 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133139 \| Gp0283931 \| Ga0245296
Sample Name	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37285
Sequencing Status	Permanent Draft
Sequencing Center	Beijing Genomics Institute (BGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300029856 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0133139 | Gp0283931 | Ga0245296

Sample Name

Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37285

Sequencing Status

Permanent Draft

Sequencing Center

Beijing Genomics Institute (BGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	174500167
Sequencing Scaffolds	10
Novel Protein Genes	21
Associated Families	21

Dataset Contents

Total Genome Size

174500167

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1
Not Available	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes

Not Available

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes

Ecosystem Assignment (GOLD)
Name	Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Ecosystem Assignment (GOLD)

Name

Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Type

Host-Associated

Taxonomy

Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Unclassified

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

Unclassified

Earth Microbiome Project Ontology (EMPO)

Unclassified

Location Information
Location	United Kingdom: London
Coordinates	Lat. (^o)	51.5	Long. (^o)	-0.12	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

United Kingdom: London

Coordinates

Lat. (^o)

51.5

Long. (^o)

-0.12

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F013656	Metagenome	269	Y
F032286	Metagenome / Metatranscriptome	180	Y
F041054	Metagenome / Metatranscriptome	160	Y
F042095	Metagenome	159	N
F050794	Metagenome	145	N
F052660	Metagenome	142	N
F057001	Metagenome	137	Y
F058555	Metagenome	135	N
F064725	Metagenome	128	N
F068855	Metagenome	124	N
F075481	Metagenome	119	N
F076064	Metagenome	118	N
F078005	Metagenome	117	N
F078006	Metagenome	117	N
F080673	Metagenome	115	N
F083451	Metagenome	113	N
F087335	Metagenome	110	N
F088920	Metagenome	109	Y
F089592	Metagenome	109	N
F093883	Metagenome	106	N
F098313	Metagenome	104	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0245296_100020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	322664	Open in IMG/M
Ga0245296_100162	Not Available	123326	Open in IMG/M
Ga0245296_100826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	28654	Open in IMG/M
Ga0245296_100949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	24529	Open in IMG/M
Ga0245296_101061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	21484	Open in IMG/M
Ga0245296_101295	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	17086	Open in IMG/M
Ga0245296_102419	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	8669	Open in IMG/M
Ga0245296_110497	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2233	Open in IMG/M
Ga0245296_131594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	749	Open in IMG/M
Ga0245296_135119	Not Available	677	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0245296_100020	Ga0245296_100020272	F013656	MDKKIYKEANQFETETNINVLYKEQVISVYTNKVDLQRKLNKVLGEPTKEYKIKRSISGSVWEIPFKDKTKIRNLMLKANIFEL
Ga0245296_100162	Ga0245296_100162103	F083451	MDKNEREKQVLDLLMSRKDIRKLVEKSNECYSKMDFVNAMKCRQEIKDIVDRESKIMLTKSESLVSLMNNADNEYKFNMLVWLHSMMCMADVFNGILEDFKDGVRKANGNSKFVKFDNLDRLMTECKKEIDYLMKGTSKSFQISFAVRSDELREMIENMVGDNIREGYDIFKEEAKMTKETDRSKIEEFNKRLDHE
Ga0245296_100162	Ga0245296_10016212	F089592	MKDILKSKEVLVEVNGFNIMSDTLYEVVGKHDGSAPQAFQDANIAKVPFPENATHVCCPWDDFSEVYNTGFYPRSRCYNGMDKDEVDKLVDQRVNNIMKPFENISQKDLSQTNFEFWDDAKDKIYMGKVYNTANTVELFYLYLAVFSGMLTPQEMDGDPIFMNSMFCFIEKDNAKDFVQQREINKMNISYKFINALKKGDKERQAVIDLLLYIGIVTRPDFTEDDYYTGSLSNWMNEKKTNIDYLLDIWDRSLEGDFKEVLEFYRIINVLQRNGRINMTPSGLQYNGQIIGPDTRTSAEFLATKKDLISVKANVLDEYEELMSISNIDDKTKKVKDVKKKEDVGKGDKEE
Ga0245296_100162	Ga0245296_100162123	F078005	MKKSEFVKELEKIIDMVKTEDDSNYEVSVMNIEMNLEVEADVMTGMDDIDFTCLMSEVYKQKAIKAIMMEKDDDEDN
Ga0245296_100162	Ga0245296_100162138	F078006	MSRYDRDIKALAGRKEYHDRTCADMVRGRFPAPWHNLNVSSMEDNILKRAAAELKGAGCRVFAWQDDTYNRGWSKGDYTMLYYAFPDSPNIGYLSHGEYGMSVAYSRAYIPSCGSGSGCCVKEEATFDLETALDVLNGPLPRWCRSYGVYPKQYDNIDKWYNSDNHNKKLFKEI
Ga0245296_100162	Ga0245296_100162141	F080673	MKLQDEALLYLRDNITKDEAYYILTTDKDIIEILIADKKDGSNRIKILDTEYTVEKDDMLLLFDTDGIIDECLLVATYIGVNMYFRRQDVNAILNNINREKVMEYPYIAIQLDNIRTIEKRRVIFEITGHRIDDNKEKIDFMFVYFMARIL
Ga0245296_100162	Ga0245296_100162147	F057001	VTNKELNKVQNEVKTSNEKTLTGAVKAWCNLFKSGKEINDILKENDIKVSKEVVPALVALAKDKEVVIQLCKEILPRVNNTFCAYKEVEREYYDKNDQDKNKKLKMNEIEDIAILGSSHKRFGYNEPIEFDFGIYYEMFNGTDKRIVKCAVPIKRYTFSLIAKCVTYYLTHPKLYI
Ga0245296_100162	Ga0245296_10016219	F042095	MAKTLYKYEASSNKFVWFTTWDRALRNYYTDDYNYVPDPVVGDPYNTFVEFRSRKPGMANVDWGDGIKEQFPMTKVQGRDDYCIIFRSLAIQHRKNPNTTWWFRKEDGSQYVPIDNHAYADGRRDVQRAVSIDFTCDIYYANIQICKMTSFPIVDIPGLEFLVVSHTLYVNDGIPVDKLSRSKKLIYIDLQNIGQRMAVIPEAITRKTEVYYLNMFNMLDLRDIESSGIRNIKNMKNLQTLDLSSCYLDRYIKEFNDLPKLTSLKIHPGPSDMWNYFDINTLPFFEVDKINPNITDFCFLDDWVSGERRTGWNDDNMSGRGLEHLTGFIAAHSNSLRMDKLPDYIYEMRAITWFNVNASTHSQKRSDDFVNSFYDLVVGWDQITMTSVAKDGKRNQFYSLSVSMYVAAYPTENQRPSGTEQAPEGFVKGSSNGSPATPMEKIYVLKNNYAQRWTIKPE
Ga0245296_100162	Ga0245296_10016223	F075481	MMRLRISLRAIVCLGLSLFLSSCGSRRQVSDTSIDSRLISRIETMINEVIDRKMVEIKTSDLNADIVITERKFDTDKDIDPATGERPVSSVTDAHIVIGRRDSTVTTDFLGVDKTITGIEDIDKKTDIKHKDIDDKEESRWPMAIIFMSILGILVVLFVLLKRFGLIK
Ga0245296_100162	Ga0245296_10016242	F064725	VRVDWIFFCITDSNTYLCAKDLNMTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAVVKTSNKQAVLPSDFFDMLDAYRCEPLVCEIPGGDKAKADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITEKIYIGSHEVRFHYHHPVRLSIGRGLRRDCAADKYRDKYDWDNYDITISGNIMYTGFDGFIYIIYRATPKDDDGLPYIPETALGYLEDYVETYIKMKIFENAAVNGLIQGAGDAYKLYAQQEPGKFARAMKELKMSMITLNDYRELAEDNRRRMLSYERMWPNAFDKYIKFI
Ga0245296_100162	Ga0245296_1001625	F093883	MEENKDIKKEIRDYLKEESDTHIRHWIAIKRESKRLYSDIEDRTKKIALKSSSLIKEEDFVVLHEMTHKIQMLNIEAVKVNSRLMFIIQLATSFGMDLDLDTTYASTAKSIIEDKTSGFVFYDDKERLRYADKELEDMFHDMSVKEVSKIGVVQSYELLMKQYNEFKDMKANATGKTKAD
Ga0245296_100162	Ga0245296_10016261	F050794	VVSKPLPILFLIEDNFLIYKNISLSATFVKAPVGTLYIMQLDAFLHRKIMQDLRIQRVKVLMMLYTSNYFVDVRQKQLLDHTYALSRDQAFDYMTEFNKRLSDKVGIKCTMDILLPTDDDNANIIIEHNGIIKKLMREAEKLELDTDAIKAMMRDLLNELKDDIDLNILIFDVSQLLIKYNLFRLEAITEQEFKGSFVRMDSRNMEIKKLTLSDIKKVVMMMEDRYDYALYMTEEYN
Ga0245296_100162	Ga0245296_10016274	F098313	MREMEFDLVIYPLKLIITVGLDYKTLCDRFENMEPEHEGKWGDEDDMDKEASFVNLVRDRYDDDKFAILWNFSSDDDLIMRNICHESFHIAMSVCQFCNMSLGFKVGEDEHAAYIAGFAGDCVSEFINSKNTD
Ga0245296_100826	Ga0245296_10082625	F032286	VTPVRHRALVFDARLSAGNTANDTLVTGGTFRFCRLMCLCVKRRNIMLNDKRRSLLNSALFRADNRTEQKTISLFSLALIFIFDFAALSERRSCPEDRSRRFVPVGTLTLSRSWRLLRWGTYPVRTVMQFSRFRCDCKTILAKNIALSRISKRSENAPKNADFHAHGQNRKRAEI
Ga0245296_100949	Ga0245296_1009496	F068855	VEAQGPQARKTLALQGLQGEKENENANVRNAGWLHSFDADYHYRGSNLHYHVNVSAALSEGGATW
Ga0245296_101061	Ga0245296_10106121	F087335	MIELYFNDANLLPENREEEQYAEAALNNILAGKTADTEMCILPCFYDAPLHKGLLYHLNDGTTLRIRPVLNEAGEPELLIRCVTEESVETVYQRVANYD
Ga0245296_101295	Ga0245296_10129515	F076064	LKKTTPGRALENLFYLQYDLPPEASFHATTEEAKRPDELYMRKLLPELTRLKLQPRHVVANDEAYYAAMKGVMLFTPEAEKLMLTEDYFSARRQIRLCAPDLKRRNEVKRPPRPALKFY
Ga0245296_102419	Ga0245296_10241911	F058555	METKIVLLQKMKSNLLQKMKSNLLQKMKSNFDKILTEAYIPKGIQAKKDELGCLRLPAGSLVCPVDYKPVTNKDGKKVTAVKYSNKKDNIRGSGMVIEKKCKQVTAYLSIINVQKHVFLRNRMRDGYRDRIEINTDDFIDILSDGIAYFCYRHVIENCHEDIDYQLKTLKAYAEGEIRIALSDIMIYSYKAKKNEDTKEIFVGKKRSVYKCLDKNLSSNERRNMANKSRKLDRVRILSKIIFRARTRNVHHIYKVTKRKTIKFNVAYLLNELNKKLAGIGMHEISRSTIYRYISMFLGMCKKSISDLYDEVKKNNGIANAKDRKNVTIGHLRLSYRGTIMHIIIAEDFIKDVFLGVKGAEMSKAG
Ga0245296_110497	Ga0245296_1104972	F041054	MKNKIRNCKDIGVNLQRIMKRLMQNDNLVKLLYYTDKDPLSNENLTEEQKESEIFEKLIKIVPRIGPKETASSIIALRVVTGKKNQDNSEFKDVLISVEIFVPLTQWIIKGTNLRPFAILGEIEESLDGKMIEGLGKMSGGDFELNFLTEEISSYKQEFIITSYD
Ga0245296_131594	Ga0245296_1315941	F088920	VSANLHHYPAFGAGLILHLILHFSPKAAIFAPKRAILLLFVPTLFFGFRAVFPLQESSKISGQTSLYQPWLSPYCLFKD
Ga0245296_135119	Ga0245296_1351191	F052660	MCILRVLPEKTSERIGQERAGTEWTVVKSKIRLCIRNRSYGRFFYDGILMGIVLPIPSHRAKSHDFAYWWPAAAGHSRSADALPGKSNF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300029856: Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37285

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences