Basic Information | |
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IMG/M Taxon OID | 3300029397 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0133115 | Gp0282671 | Ga0243510 |
Sample Name | Anode biofilm microbial communities from acetate-fed MFC - AM-anode biofilm |
Sequencing Status | Permanent Draft |
Sequencing Center | Tokyo University of Pharmacy and Life Sciences |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 110244754 |
Sequencing Scaffolds | 6 |
Novel Protein Genes | 6 |
Associated Families | 5 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Bacteria | 4 |
All Organisms → cellular organisms → Bacteria → Acidobacteria | 1 |
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Electrode-Associated Soil And Biofilms Microbial Communities From Mfcs In Japan |
Type | Engineered |
Taxonomy | Engineered → Industrial Production → Engineered Product → Bioanode → Unclassified → Anode Biofilm → Electrode-Associated Soil And Biofilms Microbial Communities From Mfcs In Japan |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) |
Location Information | ||||||||
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Location | Japan: Tokyo | |||||||
Coordinates | Lat. (o) | 35.638 | Long. (o) | 139.3817 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F019989 | Metagenome / Metatranscriptome | 226 | Y |
F051329 | Metagenome / Metatranscriptome | 144 | Y |
F064893 | Metagenome / Metatranscriptome | 128 | Y |
F076964 | Metagenome | 117 | Y |
F089117 | Metagenome | 109 | Y |
Scaffold | Taxonomy | Length | IMG/M Link |
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Ga0243510_100021 | All Organisms → cellular organisms → Bacteria | 251235 | Open in IMG/M |
Ga0243510_100051 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 133354 | Open in IMG/M |
Ga0243510_100205 | All Organisms → cellular organisms → Bacteria | 42252 | Open in IMG/M |
Ga0243510_101539 | All Organisms → cellular organisms → Bacteria | 8991 | Open in IMG/M |
Ga0243510_102036 | All Organisms → cellular organisms → Bacteria | 7137 | Open in IMG/M |
Ga0243510_109409 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 1926 | Open in IMG/M |
Scaffold ID | Protein ID | Family | Sequence |
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Ga0243510_100021 | Ga0243510_100021126 | F051329 | MPYMQVPKRSPRQEYRLKQRERIDAAPVIAKKFPRLKALKVTLEYFDATGSTKQGEMKCKLNVDHAKSVLWFACPGVECSCGDFDLSEALVKAVRGGLKVATGELHCQGTRQRGDREPVVCRTLLRYKLNLNYD |
Ga0243510_100051 | Ga0243510_10005133 | F064893 | MPKIVRWEFLGSWLLFWVLCITVIGIPLAILYLLNGTVRIEHEVSDPERFVTEFRSGRLTRK |
Ga0243510_100205 | Ga0243510_10020527 | F076964 | MTDDSVWLRPPYGQGEPQEFEAKPEILVPLMVAGWNQCPPPEKNEELKSNVDN |
Ga0243510_101539 | Ga0243510_1015394 | F089117 | MNKSIGFQLIVYSLLLAGLSYLVHHLAPDLAQTTLVTGLVGGALCLVWGVRAAAGSESKALPILTLIPVSFVMLSQTVIVWTGGSEVVTGRRSAAVVLTVLLALSVGMLMRVAYAGLVFAGQPGSAVRGVGAKPGTTGKGAA |
Ga0243510_102036 | Ga0243510_1020366 | F076964 | MTDTRVWLQPPYGLGEPKEFEAKPEILVPLMVAGWSQCPPPERNEELKSVVDN |
Ga0243510_109409 | Ga0243510_1094091 | F019989 | MNTQNINQNTAAPSVTIAPRNPARGILNYVVTLTTFDDVRSYPCRSMESALKLAERFIIGVTKPRPAAPATEQPAPAAEPVAA |
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