3300029304: Anaerobic bioreactor microbial community of Freshwater lake and wastewater samples from Australia - AOM-metagenome-Illumina

Overview

Basic Information

• IMG/M Taxon OID: 3300029304
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0118569 | Gp0137183 | Ga0119857
• Sample Name: Anaerobic bioreactor microbial community of Freshwater lake and wastewater samples from Australia - AOM-metagenome-Illumina
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Queensland
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 169983460
• Sequencing Scaffolds: 23
• Novel Protein Genes: 24
• Associated Families: 23

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	10
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1
All Organisms → cellular organisms → Bacteria → FCB group	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1
Not Available	3

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Anaerobic Bioreactor Microbial Community Of Freshwater Lake And Wastewater Samples From Australia
• Type: Engineered
• Taxonomy: Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Anaerobic Bioreactor → Anaerobic Bioreactor Microbial Community Of Freshwater Lake And Wastewater Samples From Australia

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): na → na → na

Location Information

• Coordinates
  • Lat. (^o): N/A
  • Long. (^o): N/A
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002525	Metagenome / Metatranscriptome	552	Y
F011712	Metagenome / Metatranscriptome	288	Y
F020376	Metagenome	224	Y
F023370	Metagenome / Metatranscriptome	210	Y
F025315	Metagenome	202	Y
F025496	Metagenome / Metatranscriptome	201	Y
F026597	Metagenome	197	Y
F028211	Metagenome	192	Y
F030366	Metagenome / Metatranscriptome	185	Y
F031391	Metagenome	182	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0119857_1000062	All Organisms → cellular organisms → Bacteria	77088
Ga0119857_1000140	All Organisms → cellular organisms → Bacteria	49490
Ga0119857_1000144	All Organisms → cellular organisms → Bacteria	49253
Ga0119857_1000188	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album	40703
Ga0119857_1000235	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album	35518
Ga0119857_1000250	All Organisms → cellular organisms → Bacteria	33897
Ga0119857_1000440	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album	21891
Ga0119857_1001225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	9267
Ga0119857_1002205	All Organisms → cellular organisms → Bacteria	5726
Ga0119857_1002445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5238

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0119857_1000062	Ga0119857_10000627	F099529	MNIFDILIHISLALIILYILWHGYVVVVAFRWKQADKLISRALAPRDDTL
Ga0119857_1000062	Ga0119857_10000628	F104921	MTQPNNNMPIIRPEIVAPPSVSNLSVAPVGTGMFSVTMQVIMVVRFPTDVQSGSQVVINTDHVVPQTPAETSTAMQTTIRELRYGDGETPNAFEGEIEGFQAFVQVHGYVPPTREVLIQWATSSQGGA
Ga0119857_1000140	Ga0119857_100014039	F088925	MQERKCSKCGSANVYKNTSNNWHKDGIVLQMIAKDSFHDLFQTEAFLCLDCRNLELQVAETSMMYGKQKTLVDTIQASNNWVKA
Ga0119857_1000144	Ga0119857_100014421	F025315	MQNYPVYTFEILLIVVMPLLVLYIKGSWPLRKVIPCIMVIPILGYFTYAPLHELSHAAGIYLVGGKVIVWKLIPRFWLGEFARAWLTPSGINQWWQQLTMTVFPYIMDIVCFIVAIFSFRRGSSRNPFLIGLAFMLLCLRPACDFVFEPIAFLSGDRGDFYAIQQIVGPFAILSFILISIGLAVYSISSTLSHLVRFSKQ
Ga0119857_1000188	Ga0119857_10001882	F026597	MDLFERHRIFISITLAMVILGVVGVTVSSFSPSKKSEYFRELKEIHTAVNNYDKVINSWESARNTLVDLNYWFDFIPRYDAISEEDQDVLVMQENVKDLAIRHQLRFLPEIRKYFGEYLSSRLAGLDYKITILNDERNKIIVFTHDSFTKRTLLEKFHNTVANDLRLLGFKQIRYKWYELEKLKEEKYILYNFSDLPDNEVRKFTISAIKN
Ga0119857_1000235	Ga0119857_100023519	F063202	MKTFFLLLLFAINAFAQDSTMNLQGYDVTLGMNMMEVWENLKSGFNVVEEEDGTFYISDKNDSPVGIIKFKNEIAVTIIKDWGTTNKTNSGQVFKTLWNICKQYEKDLDDAKILPIESFTPKGSKFALQIYLTENRYLDITIQHTVTILEVLENKN
Ga0119857_1000250	Ga0119857_100025029	F078881	MKNKIKLLIISIILLTLLVLSGCGTGQVSVGIGVYVPGAWGGPYSPGYYPPVGVGYPLY
Ga0119857_1000440	Ga0119857_10004405	F076231	MIQLKPNKNGTADVNEFSGFVSTKHNGVTNLTKIVLAISVLLAVLMFVSK
Ga0119857_1001225	Ga0119857_100122512	F025496	MHSLRDHLNRTPEVRSRNLAAWMAPALGERATPMAPRFFEEAALTVLAHVFRESGPIREALIFERRCFERLVQLIHRLPERGGGR
Ga0119857_1002205	Ga0119857_10022055	F045540	MLRYLYTLAMLLDSKSKIRKHYSADIVISNLFDENLDEIDFIKSLSELELIYGFEIPDSLYDQTDITLGKFAYELSQLPKVSDQLYPEFFDIKFTSMKLMEKWIPLEDKTDEESISERDEINQQFELLNYRLNILLGNVLVN
Ga0119857_1002445	Ga0119857_10024455	F068263	MPDAAEVYRPVDDSGKLSSGDIAYLSLARTRVTGETPPGEVFDPIGRIPGYPNPALFRLPHGREVALDTMFALVVTHSCEIDRQKNQDISADHVDCRLTVAPIVPEPAVTLVGENGAITDAISWAAVERNDPVSSVYLPPIEDVSRFAPGVEMPWPRAFADLRGLATVSRRMVIADRLCGLTAAYVGMLQRQLARFFTWRDLARHELVEEMTGRRIEAVVPLNPKAGRWRLALTADDGSSITVEVRTQAESA
Ga0119857_1002770	Ga0119857_10027702	F062207	MSGLRLAGALWIMAGVTCAGLLSFVLIGERLNDLGALLANLALPARVLGGALVAFLIGSLLLTRPGPNVVRWSSLVGVAWLIAFGPLVVTAVAAALGGSEVGPVISSSLITSLGIAGAVVGYWSRMAARRLK
Ga0119857_1003702	Ga0119857_10037024	F028211	MESIWMGIAPGTKATRVIAMSGPSELLMKARLEREPKHPRALATLLEAMALWQGAPVRAALCADSARPTCDSSLFREAFLDDGGALFSVVWVPVRAGRPRRDHLHGLGSFRDLERLVVEEVAR
Ga0119857_1003886	Ga0119857_10038862	F041156	MARALRLKAVDTNLRSLAVAMTRTAAMLLIAVLLILVLLPAALAASGG
Ga0119857_1004435	Ga0119857_10044353	F011712	MDLAITLGLGGWLLLIAGAIAFGVVAQFIGRAETGIEWLVDAIAAGIGALVASEFIVSWRTFEPVWDGLALVPALVGGLVVGIVVEVATRRITGGTYSGRSMAAA
Ga0119857_1005659	Ga0119857_10056593	F052687	MVRFLSIIIIIAGIGGGIYYLLSMERTEDIKVTGKLQISQQPGKYVQTSEGSGGSYFAVVEGKIRNNLGKPIKNVFIKYVIAGEETSATVFDLAPGQEMKFNTRGVNTSETHPEYNFVGIYYD
Ga0119857_1006311	Ga0119857_10063113	F025496	VRPMHSLRDHLNRTPEVRSRNLAAWMAPALGERATPLPDRFFEEAALTVLAHIFRDAGPIREALVFERRRFERLVQLIHRLPARGGGA
Ga0119857_1008456	Ga0119857_10084563	F030366	MTPETFISILALTLLATGWMLWLLPVGTCAQCPHCRIEKLAREREGDGQVGAVHGGPFCPVCGRHHRREEDHRF
Ga0119857_1019873	Ga0119857_10198732	F020376	MDKKKGTVREQWMQRTEAAYQRMFEGKGQKELATLTQREDMAVSIGKELAAFLLEEHVALDPAAQPAEASSTCCPKCGQAGIPAVRENEELVERSVTTRAGDIQLRRQRWWCAKCRIVFFSARRSAWFGDGRL
Ga0119857_1023192	Ga0119857_10231921	F023370	MAIPPAAPAGARTLVWHLESGGWTEREAGNLVALMHGLRPARSGWSVREIEHLRFLQALVKTGRIGR
Ga0119857_1024729	Ga0119857_10247292	F031391	MADWDEAPPTFDRDSEAWGATASAWAEEDEGGAGEQFLELIGSELWVAGTVDLGRFRRVSDFVNIVQGYLLIRDAAVLSRSGEATRLAMPELRVLPDDVAVVGQRETDQAPRATEGAVVIERTRQRLVVFTRSHLIDGDVYIHGDGSIMAFVDATDPKFIPMTDVRIRWLSDRKLAARYPFALVQRSQILGVATEGIKLGPSEPDAAPAETAAEELT
Ga0119857_1053190	Ga0119857_10531901	F002525	AGVDSLWEQEKPEARKMLENAADSHTSGARFVSRRFC
Ga0119857_1057981	Ga0119857_10579811	F085674	MPGEPLLLGIATIAIVVAGFTGVTSAMTPSDGSWPPAMRIRQRAIVSTSFNVVFEALAPVIAFAWLDDPRGAFMLTSLIVAVYLTGIVTWRGRQLWRAGGNRTGSALVLFALGPIATLLFWANAIAIGGLV
Ga0119857_1062025	Ga0119857_10620251	F054974	MTRFQLNRSRFIVGVVLVIIAVLMFLFAEGDYATAGAIGIGLLGLISIAISRRN