NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300029174

3300029174: Aquariaum water viral communities from Chicago, USA - Amazon Rising - AZ1



Overview

Basic Information
IMG/M Taxon OID3300029174 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0127413 | Gp0192415 | Ga0168029
Sample NameAquariaum water viral communities from Chicago, USA - Amazon Rising - AZ1
Sequencing StatusPermanent Draft
Sequencing CenterMichigan State University
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size29749109
Sequencing Scaffolds22
Novel Protein Genes22
Associated Families20

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria3
All Organisms → cellular organisms → Bacteria → Proteobacteria1
Not Available8
All Organisms → Viruses → Predicted Viral5
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWF1_45_51
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dojkabacteria → Candidatus Dojkabacteria bacterium1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2
All Organisms → Viruses1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameAquariaum Water Viral Communities From Chicago, Usa
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Aquaculture → Unclassified → Unclassified → Aquarium Water → Aquariaum Water Viral Communities From Chicago, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)na → na → na

Location Information
LocationUSA: Chicago
CoordinatesLat. (o)41.87Long. (o)-87.61Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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