3300028663: Enriched hypersaline water microbial communities from Club Lake, Antarctica - Round 1 Nha-Ce

Overview

Basic Information

• IMG/M Taxon OID: 3300028663
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0135173 | Gp0322484 | Ga0309993
• Sample Name: Enriched hypersaline water microbial communities from Club Lake, Antarctica - Round 1 Nha-Ce
• Sequencing Status: Permanent Draft
• Sequencing Center: Garvan Institute of Medical Research
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 60296874
• Sequencing Scaffolds: 2
• Novel Protein Genes: 2
• Associated Families: 2

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Antarctic Nanohaloarchaea
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Water → Antarctic Nanohaloarchaea

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → hypersaline lake → lake water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Hypersaline (saline)

Location Information

• Location: Club Lake, Antarctica
• Coordinates
  • Lat. (^o): -68.5417
  • Long. (^o): 78.2467
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F003128	Metagenome	506	Y
F055308	Metagenome	139	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0309993_1488	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	44902
Ga0309993_1506	Not Available	4718

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0309993_1488	Ga0309993_148857	F055308	VLEGVQYEMPQTIDSSTESKWVREFWMKGTESTSYATTHGMSDVVDASNTEEKIYGPSDGMDRGGGVRYYDGGGWVSIYSGISPGDWVWIHEEIDFPNSQTYTEVKDAPDGSVLGSGTVGFRNSTNQLSYKIIHANGVTSGEDLFRSVRGRPPNPPFPWG
Ga0309993_1506	Ga0309993_15061	F003128	RRRGTLRMQIEVSASEIKAAKKADDRGRVTLGSEYAGKAVTVAVLEVEDE