Basic Information | |
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IMG/M Taxon OID | 3300027935 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0114663 | Gp0127653 | Ga0209870 |
Sample Name | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_0_10 (SPAdes) |
Sequencing Status | Permanent Draft |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 34933180 |
Sequencing Scaffolds | 13 |
Novel Protein Genes | 14 |
Associated Families | 14 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira | 1 |
All Organisms → cellular organisms → Bacteria → Nitrospirae | 3 |
All Organisms → cellular organisms → Bacteria | 2 |
All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium | 1 |
Not Available | 4 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Oscillibacter → unclassified Oscillibacter → Oscillibacter sp. PC13 | 1 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp. MC6.1 | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Groundwater Microbial Communities From The Columbia River, Washington, Usa |
Type | Environmental |
Taxonomy | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand → Groundwater Microbial Communities From The Columbia River, Washington, Usa |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | freshwater river biome → river bed → sediment |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Subsurface (non-saline) |
Location Information | ||||||||
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Location | USA: Columbia River, Washington | |||||||
Coordinates | Lat. (o) | 46.372 | Long. (o) | -119.272 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map | ||||||||
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