Sample 3300026903

Overview

Basic Information
IMG/M Taxon OID	3300026903 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0095510 \| Gp0055658 \| Ga0207462
Sample Name	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A1-11 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	35644193
Sequencing Scaffolds	28
Novel Protein Genes	30
Associated Families	30

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1
All Organisms → cellular organisms → Bacteria	4
Not Available	11
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil Microbial Communities From Arlington Agricultural Research Station In Wisconsin And Kellogg Biological Station In Michigan, Replicating The Bioenergy Cropping Systems Trials (Bcsts)
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil → Soil Microbial Communities From Arlington Agricultural Research Station In Wisconsin And Kellogg Biological Station In Michigan, Replicating The Bioenergy Cropping Systems Trials (Bcsts)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → agricultural field → agricultural soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Wisconsin, United States
Coordinates	Lat. (^o)	43.2958	Long. (^o)	-89.3799	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000268	Metagenome / Metatranscriptome	1411	Y
F001437	Metagenome / Metatranscriptome	695	Y
F003059	Metagenome / Metatranscriptome	510	Y
F004992	Metagenome / Metatranscriptome	416	Y
F014051	Metagenome	266	Y
F014858	Metagenome	259	Y
F015505	Metagenome	254	Y
F017145	Metagenome / Metatranscriptome	242	Y
F017759	Metagenome	239	N
F021340	Metagenome	219	Y
F022446	Metagenome / Metatranscriptome	214	Y
F024822	Metagenome / Metatranscriptome	204	N
F025530	Metagenome	201	Y
F028161	Metagenome / Metatranscriptome	192	N
F029216	Metagenome / Metatranscriptome	189	Y
F030160	Metagenome / Metatranscriptome	186	Y
F037759	Metagenome / Metatranscriptome	167	N
F037792	Metagenome	167	Y
F037795	Metagenome	167	Y
F044475	Metagenome / Metatranscriptome	154	Y
F045439	Metagenome / Metatranscriptome	153	Y
F056751	Metagenome / Metatranscriptome	137	Y
F057709	Metagenome	136	Y
F058266	Metagenome	135	N
F070441	Metagenome / Metatranscriptome	123	Y
F079360	Metagenome / Metatranscriptome	116	N
F081321	Metagenome / Metatranscriptome	114	N
F087926	Metagenome / Metatranscriptome	110	N
F094081	Metagenome / Metatranscriptome	106	Y
F097858	Metagenome / Metatranscriptome	104	Y

Family

Category

Number of Sequences

3D Structure?

F000268

Metagenome / Metatranscriptome

1411

F001437

Metagenome / Metatranscriptome

695

F003059

Metagenome / Metatranscriptome

510

F004992

Metagenome / Metatranscriptome

416

F014051

Metagenome

266

F014858

Metagenome

259

F015505

Metagenome

254

F017145

Metagenome / Metatranscriptome

242

F017759

Metagenome

239

F021340

Metagenome

219

F022446

Metagenome / Metatranscriptome

214

F024822

Metagenome / Metatranscriptome

204

F025530

Metagenome

201

F028161

Metagenome / Metatranscriptome

192

F029216

Metagenome / Metatranscriptome

189

F030160

Metagenome / Metatranscriptome

186

F037759

Metagenome / Metatranscriptome

167

F037792

Metagenome

167

F037795

Metagenome

167

F044475

Metagenome / Metatranscriptome

154

F045439

Metagenome / Metatranscriptome

153

F056751

Metagenome / Metatranscriptome

137

F057709

Metagenome

136

F058266

Metagenome

135

F070441

Metagenome / Metatranscriptome

123

F079360

Metagenome / Metatranscriptome

116

F081321

Metagenome / Metatranscriptome

114

F087926

Metagenome / Metatranscriptome

110

F094081

Metagenome / Metatranscriptome

106

F097858

Metagenome / Metatranscriptome

104

Scaffold	Taxonomy	Length	IMG/M Link
Ga0207462_1000086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2291	Open in IMG/M
Ga0207462_1000088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2281	Open in IMG/M
Ga0207462_1000105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2185	Open in IMG/M
Ga0207462_1000108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2165	Open in IMG/M
Ga0207462_1000209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1804	Open in IMG/M
Ga0207462_1000213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1792	Open in IMG/M
Ga0207462_1000230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1759	Open in IMG/M
Ga0207462_1000291	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
Ga0207462_1000431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1462	Open in IMG/M
Ga0207462_1000868	Not Available	1141	Open in IMG/M
Ga0207462_1001180	Not Available	1002	Open in IMG/M
Ga0207462_1001186	Not Available	1001	Open in IMG/M
Ga0207462_1001329	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
Ga0207462_1001390	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
Ga0207462_1001819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	839	Open in IMG/M
Ga0207462_1001905	Not Available	824	Open in IMG/M
Ga0207462_1002302	Not Available	761	Open in IMG/M
Ga0207462_1002615	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	726	Open in IMG/M
Ga0207462_1002874	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
Ga0207462_1003771	Not Available	633	Open in IMG/M
Ga0207462_1003976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	622	Open in IMG/M
Ga0207462_1004080	Not Available	617	Open in IMG/M
Ga0207462_1004539	Not Available	593	Open in IMG/M
Ga0207462_1005205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
Ga0207462_1005993	Not Available	538	Open in IMG/M
Ga0207462_1006207	Not Available	532	Open in IMG/M
Ga0207462_1007065	Not Available	508	Open in IMG/M
Ga0207462_1007183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	505	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0207462_1000086

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales

2291

Open in IMG/M

Ga0207462_1000088

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales

2281

Open in IMG/M

Ga0207462_1000105

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium

2185

Open in IMG/M

Ga0207462_1000108

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales

2165

Open in IMG/M

Ga0207462_1000209

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462

1804

Open in IMG/M

Ga0207462_1000213

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium

1792

Open in IMG/M

Ga0207462_1000230

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860

1759

Open in IMG/M

Ga0207462_1000291

All Organisms → cellular organisms → Bacteria

1656

Open in IMG/M

Ga0207462_1000431

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales

1462

Open in IMG/M

Ga0207462_1000868

Not Available

1141

Open in IMG/M

Ga0207462_1001180

Not Available

1002

Open in IMG/M

Ga0207462_1001186

Not Available

1001

Open in IMG/M

Ga0207462_1001329

All Organisms → cellular organisms → Bacteria

950

Open in IMG/M

Ga0207462_1001390

All Organisms → cellular organisms → Bacteria

935

Open in IMG/M

Ga0207462_1001819

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria

839

Open in IMG/M

Ga0207462_1001905

Not Available

824

Open in IMG/M

Ga0207462_1002302

Not Available

761

Open in IMG/M

Ga0207462_1002615

All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4

726

Open in IMG/M

Ga0207462_1002874

All Organisms → cellular organisms → Bacteria

701

Open in IMG/M

Ga0207462_1003771

Not Available

633

Open in IMG/M

Ga0207462_1003976

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium

622

Open in IMG/M

Ga0207462_1004080

Not Available

617

Open in IMG/M

Ga0207462_1004539

Not Available

593

Open in IMG/M

Ga0207462_1005205

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium

565

Open in IMG/M

Ga0207462_1005993

Not Available

538

Open in IMG/M

Ga0207462_1006207

Not Available

532

Open in IMG/M

Ga0207462_1007065

Not Available

508

Open in IMG/M

Ga0207462_1007183

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.

505

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0207462_1000086	Ga0207462_10000864	F025530	MSDMQISTGTMMRISEAARDNIAAGIWFAVLAGSLFLYAQSILMTTGLMLELTAAYSTFVLCGKGARSLFVHAVPYAFALAGAVFLCLAPDFPNAVQASLVFLGVTALMHGSVVYSALKNPRETEDPVYASAT
Ga0207462_1000088	Ga0207462_10000882	F024822	VRQLFIRVAGVILCALALSGCVDSAGPLLSEAQPVLGERLRLQFYSLSKGTADEPEQATYKWDRGTYQRTGGGMTDIGSFSVHPLARDIFVVQSAAAKRPGMFEYAVARRLVDGVYQVIAVDEADAGQVTRARFCKRASDSSCRIEKRNQLYAFARATAERRKGQGGLVLRLADGVAESS
Ga0207462_1000105	Ga0207462_10001052	F029216	MYVLIIVIGVLSQGASIVPVGVTSQIVGKFKNLDECKAAAKQPHAAGPIADITVVTTWGATWYCTYSGTN
Ga0207462_1000108	Ga0207462_10001081	F087926	RELAELAERREAEGPPIPIRFGDASEAVNYAQDHKFALYWKGTHAFAKRQRELGDRFVARPVFTRKGSTYVGLVPLDRQKKKA
Ga0207462_1000209	Ga0207462_10002091	F037759	IVAGGLLGGAARAQPPELGASSIGILPPPDILESVRYLGLDPKGEPVRRGAYYVLHAYDRAGIELRVVADAQFGDVLFMAPALNTSLTPPYVRAARIIQVEPPESGGQQKK
Ga0207462_1000213	Ga0207462_10002132	F017145	ARIRSQSRLLAIWTRTMAARKSSHRHWMLRDIPRTYVLVVWLAFGAALFIYSNDWHPSGWSALRQEATATKPPVSVTEQYTGSIIIVPSRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0207462_1000230	Ga0207462_10002304	F037795	YAVGALLFIGAASSVFQLHGAAIVVGFILMVVSLGDGPHGLKVLYRDVKRHVVGP
Ga0207462_1000288	Ga0207462_10002881	F079360	LVFAGIAKLVAAPSRTAAGTDTSIQPTISTYDLHTGYPGMNTLPVAEIPQP
Ga0207462_1000291	Ga0207462_10002911	F045439	MSGSGFSRRTFLQGSVGLTVANFVPGTTPFAHAATMEEQTIAAAKAVGKADVNGMIW
Ga0207462_1000431	Ga0207462_10004312	F003059	MVRAGIAAGMLAGAAIVMAAMPAAAQVRDAVYRGTLICDKLPFSAGKGREAIEVTIAGGTVRYSHVVRLRDAAEPVPEQGKGSLNGQDIELQGSWKAGNRQYEAKYSGAFVRRHADLKGTQTWTDGGKSFTRACTGTIKRPFRVFLPGEKK
Ga0207462_1000868	Ga0207462_10008681	F070441	MRISTLDISGTTTTVRRHEALLRFARYLLVYNLAIISWVVISKLSQMPSFEGLLEWLTGPTWKFAALVLGSVGASYLILAHRLWWAYAVIMLAQVVYFFSAGSAELAVMRASVLFAYGVVTLPPMRPLAPLATDIAVMVICFCYIMIVLCLYSAAWVASGGRVPQGAYGRRPTPLEPLRPSRLLDTFLPGHRSQDVTLWEGAVFALSSLLFVAASMAPFYGIRRVQNAFQSTFATQVQQVCPAQPPEAMIACWAQFYPWSRVAIDLGAPIVIAVICLVLANRLRHFGRQHFINRLAELKVLPA
Ga0207462_1001180	Ga0207462_10011801	F058266	MNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVA
Ga0207462_1001186	Ga0207462_10011862	F081321	MRAVMCTVLRAAALISLALVLVSPTHAACRGNCEPNVEVARAAMQQIFKQTFLSPYTLVSFERLDGRSGERYGGVFYEMRIRAVLHYDGVRLRCRRPSCPELHHYLLENDAASKKATVAGWLFLANDGDGWKTVPLTLQSPQ
Ga0207462_1001329	Ga0207462_10013292	F022446	MSAALPSPPAPSPRGRNPLPVEALQNHLGGLLREREELHAAASPLALERNRREIVRTQWELTYALIERYASG
Ga0207462_1001390	Ga0207462_10013901	F097858	TMSTRYDISATERTAGNAGAAASLILGTLLLLIRP
Ga0207462_1001819	Ga0207462_10018192	F028161	MKASHVVTLSLAAVLAALAIQAVQAQDNKNIREDDYVRKVPLEDFKVPIVPIIPPGSSLDLRPGRTPDSADRVYNSTPFARDPTTPSIGARISV
Ga0207462_1001905	Ga0207462_10019052	F057709	MSEFDLKVALIIFVTKFIDPFAAVPALVAGYFCRTWWQVVIAAAAVG
Ga0207462_1002302	Ga0207462_10023021	F037792	MASQLRLQVVIPLVFLGLLGAAFGVYTMGKAPGGGNDAGVPLITTHPDKTKPKPAPQATDEWVNGLEAWCGGFQAQYLKIDEPQALADYESVVGEYVELWDAVQPTFIKLGLPPQKRATALALRRNIDETASKMRWVFNRFQALDVAAIQNQLDELDALDTERVALLRRLGAGTCLDEKNKGVAHLAVQRAPLLINSQLQRYGKVV
Ga0207462_1002615	Ga0207462_10026151	F056751	MDIQPDANVEDQDRAKCGKNEAGGMESSGCRVRKHVGNRAADD
Ga0207462_1002874	Ga0207462_10028742	F000268	MRAVAVMLLLSAGIAAEAMSYSFVCKASGRLGGPIRFEFYHDSTTRPKTDIQSFTVSMRTADDRWKAMWSILSGRGLTQPIEYGVTPPGFTTMIQPQKLIPGRVYAGFATDGHGGTSGVTFGFDKNGRMTFPDSFDQ
Ga0207462_1003771	Ga0207462_10037711	F014858	QPQTGQSRLSLIGRHTGLLAVAIFGTLLSAKIWVPVAFFIVDTFPVNPALAGAALFIACVVFFLCIFGVGKRSRVIGLVSRVILLFLSVVAAIASMEAISFGLISVTVTASREGFVWVSIAIVLVACAALGLKTALDWRLSYWIVFPAVFATLIFATFGLSLLSFL
Ga0207462_1003976	Ga0207462_10039761	F004992	MSNETPAAIDSDMFAAVFSENWDNARYIKSERISFMNAYSVICAGVLALLQSVQASDLIRIALLFFMTLFSLVGLLTSLRLKSELEECLAKIEAMTVQAKVSQFVALGQLEGKPSRYPRFRWIFPIFYTMTTAGFITLIVYRLVTGE
Ga0207462_1004080	Ga0207462_10040801	F017759	CPQQDRAYESKYGADSQHIELQGKVHGSASLVDARRLARNRRDPKVHAIERVLFAGEIAYRICAMDNRLIVRLKKSEEPKILTVQNSRGTEFFMANLRQIPSILRGNDSTGFFAKEI
Ga0207462_1004539	Ga0207462_10045392	F014051	EATASLMKKIGAIKPDKEPVTFENLVDPSVWKDANAMVK
Ga0207462_1005205	Ga0207462_10052052	F001437	MAGFLFRLETVDGAPAEPPTFATAVPNWSLGDVIPLGRRALRVIGKRDDDADQPPVLIVERRPTDSLDRCS
Ga0207462_1005993	Ga0207462_10059931	F021340	LQTFQAQRTIARSNEARSQFCHVAIVTLFFVIVLGASLFLGTVMVIGTFHGVDPSNELTANGRAGRIARTLQDGTLCHYMIFDNKTAQTVEDRIGRCDENKPKPKQEKP
Ga0207462_1006207	Ga0207462_10062071	F044475	FLAMGIILFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVVE
Ga0207462_1006486	Ga0207462_10064861	F094081	MRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKK
Ga0207462_1007065	Ga0207462_10070651	F030160	MASSGAKLAGTMSEKVEQRLPVSVDALRVESYSATDDSIVILLRPKYSTAERAYSIPVECLQDLIVGLRQLSYLHPQWRLKKPTGRTESLLPLEPPVAVD
Ga0207462_1007183	Ga0207462_10071832	F015505	TDQTTETSPGTYFARLFKVDAEQFQLLAQKPRSHKDSEYLNRPYELSDLMRQASDAGVWP

Scaffold ID

Protein ID

Family

Sequence

Ga0207462_1000086

Ga0207462_10000864

F025530

MSDMQISTGTMMRISEAARDNIAAGIWFAVLAGSLFLYAQSILMTTGLMLELTAAYSTFVLCGKGARSLFVHAVPYAFALAGAVFLCLAPDFPNAVQASLVFLGVTALMHGSVVYSALKNPRETEDPVYASAT

Ga0207462_1000088

Ga0207462_10000882

F024822

VRQLFIRVAGVILCALALSGCVDSAGPLLSEAQPVLGERLRLQFYSLSKGTADEPEQATYKWDRGTYQRTGGGMTDIGSFSVHPLARDIFVVQSAAAKRPGMFEYAVARRLVDGVYQVIAVDEADAGQVTRARFCKRASDSSCRIEKRNQLYAFARATAERRKGQGGLVLRLADGVAESS

Ga0207462_1000105

Ga0207462_10001052

F029216

MYVLIIVIGVLSQGASIVPVGVTSQIVGKFKNLDECKAAAKQPHAAGPIADITVVTTWGATWYCTYSGTN

Ga0207462_1000108

Ga0207462_10001081

F087926

RELAELAERREAEGPPIPIRFGDASEAVNYAQDHKFALYWKGTHAFAKRQRELGDRFVARPVFTRKGSTYVGLVPLDRQKKKA

Ga0207462_1000209

Ga0207462_10002091

F037759

IVAGGLLGGAARAQPPELGASSIGILPPPDILESVRYLGLDPKGEPVRRGAYYVLHAYDRAGIELRVVADAQFGDVLFMAPALNTSLTPPYVRAARIIQVEPPESGGQQKK

Ga0207462_1000213

Ga0207462_10002132

F017145

ARIRSQSRLLAIWTRTMAARKSSHRHWMLRDIPRTYVLVVWLAFGAALFIYSNDWHPSGWSALRQEATATKPPVSVTEQYTGSIIIVPSRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE

Ga0207462_1000230

Ga0207462_10002304

F037795

YAVGALLFIGAASSVFQLHGAAIVVGFILMVVSLGDGPHGLKVLYRDVKRHVVGP

Ga0207462_1000288

Ga0207462_10002881

F079360

LVFAGIAKLVAAPSRTAAGTDTSIQPTISTYDLHTGYPGMNTLPVAEIPQP

Ga0207462_1000291

Ga0207462_10002911

F045439

MSGSGFSRRTFLQGSVGLTVANFVPGTTPFAHAATMEEQTIAAAKAVGKADVNGMIW

Ga0207462_1000431

Ga0207462_10004312

F003059

MVRAGIAAGMLAGAAIVMAAMPAAAQVRDAVYRGTLICDKLPFSAGKGREAIEVTIAGGTVRYSHVVRLRDAAEPVPEQGKGSLNGQDIELQGSWKAGNRQYEAKYSGAFVRRHADLKGTQTWTDGGKSFTRACTGTIKRPFRVFLPGEKK

Ga0207462_1000868

Ga0207462_10008681

F070441

MRISTLDISGTTTTVRRHEALLRFARYLLVYNLAIISWVVISKLSQMPSFEGLLEWLTGPTWKFAALVLGSVGASYLILAHRLWWAYAVIMLAQVVYFFSAGSAELAVMRASVLFAYGVVTLPPMRPLAPLATDIAVMVICFCYIMIVLCLYSAAWVASGGRVPQGAYGRRPTPLEPLRPSRLLDTFLPGHRSQDVTLWEGAVFALSSLLFVAASMAPFYGIRRVQNAFQSTFATQVQQVCPAQPPEAMIACWAQFYPWSRVAIDLGAPIVIAVICLVLANRLRHFGRQHFINRLAELKVLPA

Ga0207462_1001180

Ga0207462_10011801

F058266

MNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVA

Ga0207462_1001186

Ga0207462_10011862

F081321

MRAVMCTVLRAAALISLALVLVSPTHAACRGNCEPNVEVARAAMQQIFKQTFLSPYTLVSFERLDGRSGERYGGVFYEMRIRAVLHYDGVRLRCRRPSCPELHHYLLENDAASKKATVAGWLFLANDGDGWKTVPLTLQSPQ

Ga0207462_1001329

Ga0207462_10013292

F022446

MSAALPSPPAPSPRGRNPLPVEALQNHLGGLLREREELHAAASPLALERNRREIVRTQWELTYALIERYASG

Ga0207462_1001390

Ga0207462_10013901

F097858

TMSTRYDISATERTAGNAGAAASLILGTLLLLIRP

Ga0207462_1001819

Ga0207462_10018192

F028161

MKASHVVTLSLAAVLAALAIQAVQAQDNKNIREDDYVRKVPLEDFKVPIVPIIPPGSSLDLRPGRTPDSADRVYNSTPFARDPTTPSIGARISV

Ga0207462_1001905

Ga0207462_10019052

F057709

MSEFDLKVALIIFVTKFIDPFAAVPALVAGYFCRTWWQVVIAAAAVG

Ga0207462_1002302

Ga0207462_10023021

F037792

MASQLRLQVVIPLVFLGLLGAAFGVYTMGKAPGGGNDAGVPLITTHPDKTKPKPAPQATDEWVNGLEAWCGGFQAQYLKIDEPQALADYESVVGEYVELWDAVQPTFIKLGLPPQKRATALALRRNIDETASKMRWVFNRFQALDVAAIQNQLDELDALDTERVALLRRLGAGTCLDEKNKGVAHLAVQRAPLLINSQLQRYGKVV

Ga0207462_1002615

Ga0207462_10026151

F056751

MDIQPDANVEDQDRAKCGKNEAGGMESSGCRVRKHVGNRAADD

Ga0207462_1002874

Ga0207462_10028742

F000268

MRAVAVMLLLSAGIAAEAMSYSFVCKASGRLGGPIRFEFYHDSTTRPKTDIQSFTVSMRTADDRWKAMWSILSGRGLTQPIEYGVTPPGFTTMIQPQKLIPGRVYAGFATDGHGGTSGVTFGFDKNGRMTFPDSFDQ

Ga0207462_1003771

Ga0207462_10037711

F014858

QPQTGQSRLSLIGRHTGLLAVAIFGTLLSAKIWVPVAFFIVDTFPVNPALAGAALFIACVVFFLCIFGVGKRSRVIGLVSRVILLFLSVVAAIASMEAISFGLISVTVTASREGFVWVSIAIVLVACAALGLKTALDWRLSYWIVFPAVFATLIFATFGLSLLSFL

Ga0207462_1003976

Ga0207462_10039761

F004992

MSNETPAAIDSDMFAAVFSENWDNARYIKSERISFMNAYSVICAGVLALLQSVQASDLIRIALLFFMTLFSLVGLLTSLRLKSELEECLAKIEAMTVQAKVSQFVALGQLEGKPSRYPRFRWIFPIFYTMTTAGFITLIVYRLVTGE

Ga0207462_1004080

Ga0207462_10040801

F017759

CPQQDRAYESKYGADSQHIELQGKVHGSASLVDARRLARNRRDPKVHAIERVLFAGEIAYRICAMDNRLIVRLKKSEEPKILTVQNSRGTEFFMANLRQIPSILRGNDSTGFFAKEI

Ga0207462_1004539

Ga0207462_10045392

F014051

EATASLMKKIGAIKPDKEPVTFENLVDPSVWKDANAMVK

Ga0207462_1005205

Ga0207462_10052052

F001437

MAGFLFRLETVDGAPAEPPTFATAVPNWSLGDVIPLGRRALRVIGKRDDDADQPPVLIVERRPTDSLDRCS

Ga0207462_1005993

Ga0207462_10059931

F021340

LQTFQAQRTIARSNEARSQFCHVAIVTLFFVIVLGASLFLGTVMVIGTFHGVDPSNELTANGRAGRIARTLQDGTLCHYMIFDNKTAQTVEDRIGRCDENKPKPKQEKP

Ga0207462_1006207

Ga0207462_10062071

F044475

FLAMGIILFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVVE

Ga0207462_1006486

Ga0207462_10064861

F094081

MRDDQGKILKKEFVERFDKAKGRLQQSVPEIQHLLKTSNVVEAARKIIDPAQSIFKQFADDIQLKDLFAKAEALVANLTVAKSVSRDTPPTETSPSETPASKLPSKK

Ga0207462_1007065

Ga0207462_10070651

F030160

MASSGAKLAGTMSEKVEQRLPVSVDALRVESYSATDDSIVILLRPKYSTAERAYSIPVECLQDLIVGLRQLSYLHPQWRLKKPTGRTESLLPLEPPVAVD

Ga0207462_1007183

Ga0207462_10071832

F015505

TDQTTETSPGTYFARLFKVDAEQFQLLAQKPRSHKDSEYLNRPYELSDLMRQASDAGVWP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026903: Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A1-11 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences