NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Sample 3300026444

3300026444: Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepC_8d (Metagenome Metatranscriptome)



Overview

Basic Information
IMG/M Taxon OID3300026444 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0133460 | Gp0294653 | Ga0256364
Sample NameMetatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepC_8d (Metagenome Metatranscriptome)
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size154374222
Sequencing Scaffolds65
Novel Protein Genes69
Associated Families53

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available40
All Organisms → cellular organisms → Bacteria3
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage8
All Organisms → cellular organisms → Eukaryota → Cryptophyceae3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_20162
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP27121
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales1
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameFreshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater → Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Alternative Ecosystem Assignments
Environment Ontology (ENVO)freshwater river biomeriverriver water
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationUSA: Louisiana
CoordinatesLat. (o)29.8571Long. (o)-89.9778Alt. (m)N/ADepth (m)5
Location on Map
Zoom:    Powered by OpenStreetMap ©


Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F000240Metagenome / Metatranscriptome1481Y
F000344Metagenome / Metatranscriptome1257Y
F000370Metagenome / Metatranscriptome1221Y
F004323Metagenome / Metatranscriptome443Y
F005668Metagenome / Metatranscriptome393Y
F007472Metagenome / Metatranscriptome350N
F009078Metagenome / Metatranscriptome323Y
F011267Metagenome / Metatranscriptome293Y
F014949Metagenome / Metatranscriptome258Y
F015184Metagenome / Metatranscriptome256Y
F016245Metagenome / Metatranscriptome248N
F017444Metagenome / Metatranscriptome240Y
F020340Metagenome / Metatranscriptome224Y
F020528Metagenome / Metatranscriptome223Y
F022158Metagenome / Metatranscriptome215Y
F023359Metagenome / Metatranscriptome210N
F025755Metagenome / Metatranscriptome200Y
F026478Metagenome / Metatranscriptome197Y
F029333Metagenome / Metatranscriptome188Y
F034901Metagenome / Metatranscriptome173Y
F036560Metagenome / Metatranscriptome169N
F042749Metagenome / Metatranscriptome157N
F044315Metagenome / Metatranscriptome154N
F045790Metagenome / Metatranscriptome152N
F047008Metagenome / Metatranscriptome150N
F050983Metagenome / Metatranscriptome144Y
F051067Metagenome / Metatranscriptome144N
F052593Metagenome / Metatranscriptome142Y
F054804Metagenome / Metatranscriptome139N
F059099Metagenome / Metatranscriptome134Y
F060853Metagenome / Metatranscriptome132N
F061852Metagenome / Metatranscriptome131Y
F061856Metagenome / Metatranscriptome131Y
F063745Metagenome / Metatranscriptome129Y
F067528Metagenome / Metatranscriptome125Y
F068878Metagenome / Metatranscriptome124Y
F072383Metagenome / Metatranscriptome121Y
F078630Metagenome / Metatranscriptome116N
F079635Metagenome / Metatranscriptome115N
F080126Metagenome / Metatranscriptome115Y
F082153Metagenome / Metatranscriptome113Y
F082176Metagenome / Metatranscriptome113N
F085384Metagenome / Metatranscriptome111Y
F086577Metagenome / Metatranscriptome110Y
F087401Metagenome / Metatranscriptome110Y
F089936Metagenome / Metatranscriptome108Y
F095362Metagenome / Metatranscriptome105Y
F095369Metagenome / Metatranscriptome105N
F100446Metagenome / Metatranscriptome102N
F100451Metagenome / Metatranscriptome102N
F101271Metagenome / Metatranscriptome102N
F102614Metagenome / Metatranscriptome101N
F102620Metagenome / Metatranscriptome101Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0256364_1003665Not Available2600Open in IMG/M
Ga0256364_1008786All Organisms → cellular organisms → Bacteria1740Open in IMG/M
Ga0256364_1016967Not Available1264Open in IMG/M
Ga0256364_1019122Not Available1192Open in IMG/M
Ga0256364_1020446All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1154Open in IMG/M
Ga0256364_1029524Not Available955Open in IMG/M
Ga0256364_1030144All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage945Open in IMG/M
Ga0256364_1032001Not Available915Open in IMG/M
Ga0256364_1032564Not Available907Open in IMG/M
Ga0256364_1033248All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage898Open in IMG/M
Ga0256364_1033444All Organisms → cellular organisms → Eukaryota → Cryptophyceae895Open in IMG/M
Ga0256364_1033945Not Available889Open in IMG/M
Ga0256364_1034427Not Available882Open in IMG/M
Ga0256364_1034564Not Available880Open in IMG/M
Ga0256364_1034747Not Available878Open in IMG/M
Ga0256364_1035615All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales867Open in IMG/M
Ga0256364_1036010Not Available862Open in IMG/M
Ga0256364_1037636Not Available841Open in IMG/M
Ga0256364_1038699All Organisms → cellular organisms → Eukaryota → Cryptophyceae829Open in IMG/M
Ga0256364_1039288Not Available822Open in IMG/M
Ga0256364_1039442Not Available820Open in IMG/M
Ga0256364_1042159All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage791Open in IMG/M
Ga0256364_1044426Not Available769Open in IMG/M
Ga0256364_1044543Not Available768Open in IMG/M
Ga0256364_1044829Not Available765Open in IMG/M
Ga0256364_1046487Not Available750Open in IMG/M
Ga0256364_1046793Not Available748Open in IMG/M
Ga0256364_1047615Not Available741Open in IMG/M
Ga0256364_1047685All Organisms → cellular organisms → Eukaryota → Cryptophyceae740Open in IMG/M
Ga0256364_1048085Not Available737Open in IMG/M
Ga0256364_1048595All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia733Open in IMG/M
Ga0256364_1050327All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales719Open in IMG/M
Ga0256364_1050466All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage718Open in IMG/M
Ga0256364_1051072Not Available714Open in IMG/M
Ga0256364_1051078Not Available714Open in IMG/M
Ga0256364_1052017Not Available707Open in IMG/M
Ga0256364_1052388All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage704Open in IMG/M
Ga0256364_1052471Not Available704Open in IMG/M
Ga0256364_1057302Not Available672Open in IMG/M
Ga0256364_1062111All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria644Open in IMG/M
Ga0256364_1063400All Organisms → cellular organisms → Bacteria637Open in IMG/M
Ga0256364_1065929All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016624Open in IMG/M
Ga0256364_1066363Not Available622Open in IMG/M
Ga0256364_1069327All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage607Open in IMG/M
Ga0256364_1071575Not Available597Open in IMG/M
Ga0256364_1073005All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida591Open in IMG/M
Ga0256364_1076887Not Available574Open in IMG/M
Ga0256364_1077898All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016571Open in IMG/M
Ga0256364_1079353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium565Open in IMG/M
Ga0256364_1080632All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage560Open in IMG/M
Ga0256364_1082459Not Available554Open in IMG/M
Ga0256364_1082943Not Available552Open in IMG/M
Ga0256364_1082996All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712552Open in IMG/M
Ga0256364_1085811Not Available543Open in IMG/M
Ga0256364_1085813All Organisms → cellular organisms → Bacteria543Open in IMG/M
Ga0256364_1085959Not Available542Open in IMG/M
Ga0256364_1088354All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales535Open in IMG/M
Ga0256364_1091622Not Available525Open in IMG/M
Ga0256364_1091691Not Available525Open in IMG/M
Ga0256364_1091782Not Available525Open in IMG/M
Ga0256364_1092257Not Available523Open in IMG/M
Ga0256364_1092538Not Available522Open in IMG/M
Ga0256364_1094708Not Available516Open in IMG/M
Ga0256364_1097702Not Available508Open in IMG/M
Ga0256364_1098994All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon505Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0256364_1003665Ga0256364_10036651F072383MKVTITYHDNESYTVEEVVKQALHNYGRSAQVEVMPESTMAYDHIYFGLQQLITHEQLSLLFDRDN
Ga0256364_1008786Ga0256364_10087862F061856MNQHQNQVSRAMIHINDVKYDLLKIAELYDGVLQEGLGHMPADMFNAYLSDLRGEDWVHDFEVSEITLKEQSYTYDISVQITKDRTPKKLKIHVGLIKVLGQNSLCLK
Ga0256364_1016967Ga0256364_10169671F051067MSYNSLTYFDLDLKTLTPMDKFIMRAFVDESYLTNLYQATDSAQQLKMQGQTYCYRYVPQQLGLYSKMYDQNDLIDLTFISYIVPNPYTYDFSVPFNVNGHIIYVDEVDKSFIIARKGREFYESLYAALEMAKEFRSNGRYYCYNMVTPNWFLPENRYAAGIPGQKLILLWYNMNYVIKN
Ga0256364_1019122Ga0256364_10191221F079635GTDPYYVDTDPEDAEGVVRPGYVRVVCWQSSACLQIREDIINQSQLMNFLASARPADNLSECIHLQNQLATPDNVKIICDWLAKHVEFQSRDAPAEERRAFDQRFFLLNPAGHAAYDSASNDQARADILDARKDWLRWRLDDPENEDPKRESVAPGGVRTPAFQRTGPVQERLHRTYEEIQHIMFLANFLELHPTDWHVDFAKKEAERLAAQAPGPFQEYGLDPADKFAETIMELCCHHLGDMILGCESPVDMQHRFPTLIGAKALTAKDRYDIVTADLWIHGDDFVEKVVPELQEQQRAEFAQARASGMSEDDIEKKFGRPIPDWTLESTQEERAFMKEVPGQEGNPTLRVPAIKINDQQPADPGFEIGHHWWG
Ga0256364_1020446Ga0256364_10204464F050983LATNKIILAGATTNTAGAYFQTVTVTAVDSGNGTVVPAGIYVMFPSANVTVLANDGSSNATVMAANTGGVVISDGVNVYVKNSSGNANVTMLDINGGQAAGETYA
Ga0256364_1029524Ga0256364_10295241F022158CTEPGCTKCAQSPTDKCATHGGGKRCPHCITWPDSRSGSIAYDGYCATCFKQLFPNDERSKVIYAHTKEIRVRNAINAMFEGFIHDKPLYTGQCNCTHRRRIDHRKQIGNTVLAIETDEFGHTGYDPKDEDIRYDDLYMIHSGKWVFIRFNPDGNGVDMVDKLARLMQEIQIQIERIENDENNELLEIIKMYY
Ga0256364_1030144Ga0256364_10301443F052593MAYIYPAPGVANVELTLEIEVSGDTNALAIPALQDITINNANDVFTWTQLDSGSKFNIPTTASNSIDMNLVVDQTVFFGSGSGADVAVNKGLFGLSKEKKLISFSLYMGDTNSGSSGKTISGTGYVVGLAPTVSADSPVWVTPVSITVVGDYT
Ga0256364_1032001Ga0256364_10320012F044315MLALVVCGLVMFVNNGSARAQPLDLLQQTCSGCLAKISKKINALSADQQHMAQQFESELTQLQQSVSKLKAEITHVNPRSGLVRVIKSDVLKSASPAGASEAAIAVSTQSTHDPEFDESGFKKGANRARNMRDKKYGAFPNRWVDKDTVEAFADHIYGPNPTTLDRKGVEREGYFTMAKIHSGMFYYINLEGVSNHHIKLIMQGTDGYNREYEGYGSIYTGPIYDGDHGVRDYFEVQDLVSGDVEFFRFSHPWTPPAMK
Ga0256364_1032564Ga0256364_10325642F007472IQLGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYAYKVEFSYTRVTSSDSSLASSLYNYTQTTFDMFGQTVHVQSANTKIVRTTQQTYAQLGASNVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFVGITALRTILIIALLIVVASEIIAFLAFLGLSDKVASDSPNCLSGPCQKFADSVTTQLGQSTLAIGTETSVSVALQQIASWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0256364_1033248Ga0256364_10332481F011267KVWGDNMPSTWDPMDGATPNYSSGQTDGVTVPARSVPIGVAQYDLYRPFDKGTSQGAGFITHGYVEYPMVSGVNADVTVGSVVRSDNMGRPVKAAAADFLDSSDVYSYLQVGKVIEIEKFATNFDDGLLSYMQLPSDPGALKTVYELTRSGAFSGKLGIRSNLDVTNVIGAFRVNLTL
Ga0256364_1033444Ga0256364_10334441F042749HIFAISHRPITTMIGATWMKYAAVPCLLLLAAVAVLYTDSSQQSAEPNLDVALVSSSQQTQSLALFKHAAIEDVYVYAGPEEHTRHLVPFICRLIKRHRFRLNIHQFFSVDDAPLRSVLWSHDSRVVIFPPFESYPQISAKGFTDLRAYVAAGNNVVFMGSYIALQVMNDAFGFSLRDDYKEGPYYRNDRNVRGTEFEYLPSRLNEPSPRVYGAMAKSLPPGGFSLYDSLGSVVVFYVRYDLGTIVYIGYQFDNPYQIDSLVRVIHAAMAM
Ga0256364_1033945Ga0256364_10339454F095369VAYYIRDGELIPVAIPLNQRVKIGKYYEPPQLSYLSNDQLWIQDVYVFKQIPWYMIKNRYERYLLYASLYGAIVVMLTMIGRYWLGAPN
Ga0256364_1034427Ga0256364_10344271F007472IQLGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYSYKVEFSYTRVTASDSSLASSLYNYTQTNFDMFGQTLNVQSANTKIVRTSQQTYAQLGASGVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFIGITALRTILIIALLIVVSAEIIAFLAFLGLSDKIATDSPNCLSGPCQKFADTVTTQLGQNVITINSEAAVPVSLQSVATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0256364_1034564Ga0256364_10345641F080126MKKVTLSLAAIALVGLYAGSASAQCAFDIAPAKGVRGSMVRNYAPCPGTENPTANTTTQGGTDACTPVTPAEVSGNGTLYSYDVKGKCDVRTSAKLVSDCAEVEDSAGNNLGLAPGACHVTYVTSKCSGILGQDGVTPAGASDDGWALATLSRATLDDPSNGDMTVIDFPVTFLYSTPEKGKMEVDSSSAQALAPLVGATGAKLPPCTQIEVVNVIIKDPAGLPFAKLGSATVPK
Ga0256364_1034747Ga0256364_10347471F007472QLGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYSYKVEYSYTRVSASDTSLASSLYNYTQTNFDMFGQIVNVQAANTKIVRTTQQTYAQLGATSVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFVGITALRTILIIALLVVVSAEIIAFLAFLGLSDKISSDSPNCLSGPCQKFSDTVTTQLGQNFITIGNEASVAVSLQSVATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0256364_1035615Ga0256364_10356152F101271TTDLPIGQHERDAMLLLFDFSEAIAHQREALAKRDWVKLQRSIQALQHAMHQIASFPGGAEGVRHQLVASEGDARETADRLIEKVAIERRSSAELIRLQLQRLQALQAMTSLDDDAGTYTESGATKGRSGRLSTWV
Ga0256364_1036010Ga0256364_10360102F045790MMDIHELREELLEQAMEHLDCKFRTQKKFALMFFEHKLKQGVPIDNYLSFMPQIYTPQEALELAK
Ga0256364_1037636Ga0256364_10376362F054804MKIIITTQVYNNYGTALEPRWKPKGAGDYVVNLPCGYTDEDVKRKLELAKAVLELHNTPMWWDTWLGYHVVEDNILTDFESQQLEWDGRIDFPAEVLNV
Ga0256364_1038699Ga0256364_10386991F042749SVASAQSLFTLSSVAASLGPLSKMAGSTWMKIAVVPCVLLVAMVAVMYISPSETSTEPNTKVALVQSAQQVQSLALFKHAAIEDVYVYSGKEEHTRHLVPFICRLIKRHRFRLNIHQFFSVDDAPLRSVLWSHDSRVVIFPPFESYPEISSKGFTDMRAYVAAGNNVVFMGSYIALQVMNDAFGFSLRDDYKEGPYYRNDRNVRGTEFQYLPSRLNEPSPRVYGAMAKSLPPGAFSLYDSLGSVVVFYVRYDLGTIVYIGYQFDSPYQIDNWVRV
Ga0256364_1039288Ga0256364_10392881F000344MRPRSAHAALSGVGEHTARESESAQCCAAGKERVANAHPHFEP
Ga0256364_1039442Ga0256364_10394421F009078MVHVNKPAHPREGAITDKTGGCNNDAGSIGKSFCLQARKGNLSRRKVTGGADFYTKPAQLIGMRKGSVFVRGVAPKGLYAV
Ga0256364_1042159Ga0256364_10421592F078630MFNQPLLFIDSVQNAKMQFVEKYVRHPDLKNDMIIYIDAQTRFLHSAVEATNGIISTCMREFYHTKLEKLLNPFSIDWHKAGWDAWIAQSRAEQKTNK
Ga0256364_1044426Ga0256364_10444261F102620MKLFDLIKDRVKEPQGVISDNEMVVLNRRDFLYSETSTASAFLRLFRAERVTYEMYSIIDFVHTNVCKIRPPTEVRVFQLSQSMTLPSLAASVLVGDLASNFRAYAPRGVQGIQSQDAFGQTLAKRFEVQLNSGLSMTDIGSGENAVDIIFCNASNEAEVSSGLKAFERVKR
Ga0256364_1044543Ga0256364_10445431F020340NEFNVRPNHMHVSVHPSDGQYGAGASKADIGAGITVQARDGGNNVLTGADNTNAGSDTVVVTVLEASGSVLDANLLGSKGLFLSSGARTFADLGLQGDAGTHFRLRFTYNSLAVESNEFNVRPNHMHVSVHPSDGQYGAGASKADIGAGITVQARDGGNNVLTGADNTNAGSDTVVVTVLEASGSVLDANLLGSKGLFLSSGARTFADLGLQGDAGTHFRLRFSYNSVEVDSNEFNVKPHHMHVSVHPSDGQYSAG
Ga0256364_1044829Ga0256364_10448291F086577AELKALAKEQLRANLLAPMQELEARVEQMRQLAQNGSVLLLGNVVDSLRISGFDSKVLNPGVAGLPNFGRFGLTDLQIEFAAPANGSSYSRLTTLGATVIATEDWKIIGDVRVLSFAFSVLMETDGAGNRKFSGSVQGSIGIGRFTFGAYVPFNKPGSQMEFTLPEVTVNGVNVNELFGIGTQVSVSPADIEKLLESEGGDVKARVKAELAQKAAELKALAKEQLRANLLAPMQELEARVEQMRQLAQNGSVLLL
Ga0256364_1046487Ga0256364_10464871F089936PHNRKAYFMKKALIGMAVGAMALGASVVPASAGYLGSSDDLTLWDGIAGTDGGSTDAPQGPEALCNDGQDDIFEALVLTGGWASRLDTDGNGKPRYTVFQPYDLILNGLLGALGLEISDLNSQPAVVQGILADHIANGSFDENELEDTDLTRITMRSGFVATLTESEYDVMFPPAATFGERDMYENVYIEGVKIEDGGQYANGWLYCIGGIIDSTPQVSHEGLNSEDTPNDGTPGGTNSLPDTL
Ga0256364_1046793Ga0256364_10467931F089936HNRKAYFMKKALIGMAVGAMALGASVVPASAGYLDETETLWDGIAGTDGGSTDVAQSPASALCNDGQDDIFEAMVLTGGWAERLDTDGNGKPRYTVFQPYDVILNGLLGALGLEISDLNSQPAVVQGVLADHIANGSFDENELEDADLTRITMRSGFVATLSNSEYDIPGALLAGTFGERSIYDNVYIEGSKIQNGSPYSNGWLYCIAGIIDSTPQVSHEGLNSEDTPNDGTPGGTNSLPDTL
Ga0256364_1047615Ga0256364_10476151F089936PHNRKAYFMKKALIGMAAGAMALGASVVPASAGYGEDNLWDGIAGTDGGNTNGTALCDDDEDDIFEALILTGGWAKRLDTDGNGKPRYTVFQPYDAVLDGLLDALGLSIADLNDQPATVQAVLADHIANGSFDPNELEDTDLTRITMRSGFVATIFGPGEQLSAPRSVPGGAFIEGAQIVEAAQFDNGWLYCILGVIDSTPQEAHEGLNSEDTPNDGTPGGTNSLPDTL
Ga0256364_1047685Ga0256364_10476851F026478DDEEVIQAKDFALKEIIKLSYSYRDMKIAKLISAEKARSAFSDGTNFFLKMELSCVSKCEAPLSPASTCRRGKYKGTNEIIVFWKDDGHYDGIAIDEFPQMDGEFHPCTPSYKGSEKCNPAEHRTPEQAALFMDDPEDDSVPRKEDL
Ga0256364_1048085Ga0256364_10480851F102614RVSIAKLQAALMLVSGLAFTSSSISSAVPPTTTGASIVTSQNACVWWYEGFPSSISLSAGDGVKYEGLDLELTDTDEPSIKLYISGNSVEGEPPAGNYDSNTECTWYRTALIQGIEVLVDVDGTAVSSTDAGLAFDYTDLLNGDLPTALEGLNITNTLDVTCDGYWSSTAEIQLNTTSVGANVATAGASNPPKTKLADADSDRCAVELDYSVVVPGDKLPESPGTATTFTLPSIVWTVTADPTVL
Ga0256364_1048595Ga0256364_10485952F004323MPRVGFRRLEGMAEPASANHSPVTRDYPSRALSDVFQAAALR
Ga0256364_1050327Ga0256364_10503272F067528LFELDFFELAQLGGYEQNSVSIALKPLYEGTFFKLWSGGNREKVNQINSLSVAVERLKI
Ga0256364_1050466Ga0256364_10504661F014949KLGYKWMELPRVISIRISDDYFGGMPWDAIKHDKTLKAQFYRVVEREYPQFVCYPRGRLPIPVDVPYPTKRGQQRFFKGI
Ga0256364_1051072Ga0256364_10510721F034901KQHMNTRSFAGIYARKLRGPSRFIWTLDTLRIIVRGLFQFHRCGPNRVSLDAIAPHLRALVCDRVKSIVCDSHSNPDFAEHYFERICARWICLPSLRAVLLKLKECDSYASLVGSTSATYDSLRADGFMSRLAYDAFDSEITQLHFSHPGCHLHRLPAIPRPCARPSMGSCFYCGEGLIDKIDWNCFPNCECIGYEGGVDEVLVCSSCVEEMADE
Ga0256364_1051078Ga0256364_10510781F089936HNRKAYFMKKALIGMAAGAMALGASVVPASAGYGEDNLWDGIAGTDGESTDNTPAAPLCDDGNDDIFEALVITGGWAKRLDTDGNGEARYTVFQPKDVVLDGLLGALGLEISDLADQPSVVASILADHIANGSFDPNELEDTDLTRITMRSGFVASIFGPGEQLSGPRSVPGGAFIAGAQIIDAAQYDNGWLYCILGVIDSTPQVPTEGLNSQDTPNDGTPGGTNSLPDTL
Ga0256364_1052017Ga0256364_10520171F089936KVHTMKKAIIGMAAGALALGASVVPVSAGYNGVDNLWDGIAGTDGGSTDDGAQESDNPLCDDGQDDIFEAMVLTGGWAKRLDTDGNGKPRYTVFQPYDAVLDGLLDALGLSIADLNDQPATVQAVLADHIANGSFDENELEDTDLKSITMRSGYVASVSTATGDLVDQVVTPGRDIYVNVYIAGAFIDDGEQYDNGWLYCLAGFIDSAPLETHEGLNSEDTPNDGTPGGTNSLPD
Ga0256364_1052388Ga0256364_10523882F085384MSYIIENITTKEVTTKFGPKPAYTVHAGGERFSYGFKKPTFKIGDTVDFQYTENTYGKNIDMASVRLLAKGEGAPAPVGAVAGVSKPSYSPPSKVFPIPPLHGDRAIVRQNSITNAVKATDNYLRGEDVTPGSIEEYADFVIEVARKFEAYSCGDLDLAAAEEMTK
Ga0256364_1052471Ga0256364_10524711F060853NLYLQPAPWRKWMQTREEIIQDWKAGKDFRIESGPYCSIRDIEYLRSSYNRIYIIHDRGSIEV
Ga0256364_1052544Ga0256364_10525441F080126ASAQCAFDIAPAKGVKGSMVRNYAPCPGTESLGVTNSETEGGTESCAPVYPYKGAAVAATLYSYGPKGKCDVQTKATLVADCSTVTNGAGDLLGLGAAPCHVTYVKSKCSDILGTDGSTPIDGNLDTGWTLATLTRATFNDASNGDMTVIDFPVTFQFGTPKKGKIILKANSAEVLKPMVGVANADLPACTSLEIVDVTIKAPGGLPFAKLGGATLPEAP
Ga0256364_1057302Ga0256364_10573021F089936MKKALIGMAVGAMALGASVVPVSAGYGSDNLWDGIAGTDGGNTDGGPTEAFCNDDQFDIFEALVLTGGWANRLDTDGNGKPRYTVFQPVDLVLDGLLDALGLQISDLNDQPAVVAAILADHIANGSFDPNELEDTDLKSITMRSGFVASVYGPDEQLGGPRTVPGNAFIQGARITAANQYDNGWLYCILGVIDSTPQVPYEGLNSQDTPNDGTPGG
Ga0256364_1062111Ga0256364_10621112F017444LLLFLKPHQSLDAKVRELSHQAIDEVLKTIGEIYEQEY
Ga0256364_1063400Ga0256364_10634001F087401MRRQRGLVGVIALATLVSVGGIASTASARVTTEESASILVFPKVVADGNRDTIIQITNTSNNMRHAHCFYVNAAPTDPDRPISLNESDYNPPLWTETDFDIWLTKQQPTHWVVSQGRRFDPTDATCLNAANNSANNCDPNTSGTGDADCCDAGFDPGRIPPTAPDFIGELKCIEVDASGYPVPGNSLKGEATIVE
Ga0256364_1065929Ga0256364_10659291F023359KTSQAFVVIVLVVSFVLTVLLTLFQLDRVRNWFIFSIGMSFTRIAITLLAALVLVSSVIAFLSFLGLPQAFKDEIPNCVDGPCREFSNSIKLSDLIEVQGADTYSLVNTRTWGPVEGWFIVLGIIPVSVVLLALVVLNKFPLPIDSEASSGEAL
Ga0256364_1066363Ga0256364_10663631F025755NKIVKTIGVLSLASLMSTSAFSQITISGYAEVGMITGSNKQTRSTAHSKGLGSEFLVTVAGKGTMSNGWTFSGYQNFDTDEVGNGVDAANVNPMTTRALEISPNKDFKLFYTYDGVYGGEIARTAIPVVTERPVDLTGLSGLAEFIDVTSGGHAVGLEALNLGPAGRFSIAYNPNLSTTQSASSDRVSSATNFLGGTGNNNISGYS
Ga0256364_1069327Ga0256364_10693271F063745LKPNQQPQTPTKLSPRFKSLAKECGFVFWNSEPHGPGPGNIDWSCDYTSEFEHYSRELVNWTCELMRQEIVRDYLFKASKNTYQHLVVQD
Ga0256364_1071131Ga0256364_10711311F000240AKLLILACLLLGAFSVEDKYFFTGGTPGYIPTSTPFDNPKTLTERTPTIPNAPDCSVRPQTVIEIQRMRESASRIAQMIEAEVMIMNKRKAFVEQMTTYLNDRIRELNKVKSELAEETRWIEVSTNRIQELAEREKLIKMQDILACLNNGKQEMSSESQSQTSTISSLQAQSKAVEARINEIKKKIDAAQSSKGGKGGK
Ga0256364_1071575Ga0256364_10715752F047008MKMTKDQKTCRKLWLEHVRESGGIVHTRPPQGDENGFCLVAMPCAYNSRHAKFYDVSFAWCADNDQFDRKVGEFIALDRQMFGQTTKLPGYIIDNM
Ga0256364_1073005Ga0256364_10730051F015184LHEQHSLLASTSLKNGNGWATLGAHIAHGQHSTFGTQFGFSHTNSHFGFGQAGLWHFQSHLGSSQTASHSGFGAWQ
Ga0256364_1076887Ga0256364_10768871F020340LEASGSVLDANLLGSKGLFLSSGARTFADLGLQGDAGTHFRLRFSYNSLTVESNEFNVKPNHMHVSVHPSDGQYSAGASKADIGAGITVQARDGGNNVLTGADNTNAGSDTVVVTVLEASGSVLDANLLGSKGLFLSSGARTFADLGLQGDAGTHFRLRFSYNSVEVDSNEFNVKPHHMHVSVHPSDGQYS
Ga0256364_1077898Ga0256364_10778981F023359VLTVLLTLFQLDRVRNWFIFSIGMSFTRIAITLLAALVLLSSVIAFLSFLGLPQAFKDEIPNCVDGPCREFSNSIKLSDLLEVQSGTTYSLVNTRTWGPVEGWFIVLGIIPVSVVLLALIVLNKFPLPIDSEASSGEAL
Ga0256364_1079353Ga0256364_10793532F000370MSYKSDVKPVSTSATSAVLYTGPTRLRGFMIQSTGVAGTAIINGLANASTVSSSTNTQVYMVVTVGAGQTETLNIPEDGVLYAARNGTGIVDGIGVTANSSALNITLFIDK
Ga0256364_1079887Ga0256364_10798871F082176FSIDAGTVQFVPAVSVVKISPSAVQAGVKSVLEIEVDVDCDCRAGLECRLGQARAPAVCSAGSRSLRCTIVPVGAGVRAFALMMDGQALSRSTVHVNVYESLITNIVIRPSAVDSSGGALVTVASSACASGPGLSGGMVVRFGEDGTSVFCPYPVADGAITASCAVICTAPPALSDVETVYVWSDAS
Ga0256364_1080632Ga0256364_10806321F020528ADQEQMDMMSTNLTNQESIFQDAIKRNTIYRAKYKLTGYNLNIKFHPIAQHFWICDPTVPEMKDQPFCGYYDPMTIQEAMDLYPGINLEEFERHAEYNMNGAYQAGSVLNNLAIHARDSVPIMGIPVSSASSADPDSRQVSVVTVWNKYDIDGDGELELVEIIYSGTYIISAREVEFIPVANMCPK
Ga0256364_1082459Ga0256364_10824591F100451NERIAAQPPGPFQEYGLDPADKFAETVMELCCHILGDMILGCESPVDMQHRFPTLIGAKALTAKDRYDIATADLWIHGDDFMFEIVPEFQEMQRQEFAAAQAEGMSAQDIEAKYGKPIPDWTYESTQEERAFMKEVPQKEPNEQLKVPAIQVNDSQEADPGFEIGHHWWG
Ga0256364_1082943Ga0256364_10829432F095362FIEWFYNKSFPSYDSKRNRNGFLEEMLDLNKIDHDALQYWIQEAFHQGAKAQRELDSEK
Ga0256364_1082996Ga0256364_10829961F005668MLTQLAEFDLERDYAAPYTTSRNTYLQAAAALKLATGPYKAARDAYVAATATYTKSLYE
Ga0256364_1085811Ga0256364_10858111F061852YVTKTGEKPVKKDVTADAIGAILRLSENDIESLTKANKSALKAIFDALANSKPL
Ga0256364_1085813Ga0256364_10858131F059099RGKDRQMPADHDHPDTIDPQEALRLLDEARSRIRMVIWAFHGMHQDMSVLTVDDISDAEHILTEVLENALNPSVDALGEMLGSGPIESATTH
Ga0256364_1085959Ga0256364_10859592F095362VNIPVQKKFIEWFYHKSFPSYDSNRNRNGFLGDMLDLDKIDHDALQYWIQEAFHQGAKAQRELDSEK
Ga0256364_1088354Ga0256364_10883541F036560MFQITTELYGKHAAALYAQASDFNKTARFYYMKAEDAYFLANAQASYDDFTRSRKQWDYFYHRK
Ga0256364_1091622Ga0256364_10916221F016245SFTPVDAVPNDGRFVLTLVGAGFACSAGTTVTFVSPADGSGYVSISAGLVLTLQLSGGTFSAGQAVEFVFGGVTNPNSNQSHISNIHAATLNAPGNIVGASVTGYLPAIVNGLGALVVGLSNTVRQGTGIVMTVSFTPVDAVPNDGRFVLTLVGAGFACSAGTTVTFVSPADGS
Ga0256364_1091691Ga0256364_10916911F016245PAIVNGLGNLSVGLSNTVRQGTGIRMSVSFTPVDAFPSDGRFIITLVGAGFACSDNTAVTFVSPAGGSGSVSISAGLVLTLQLSGGAFSAGGLVRFWFGGVTNPAMNQSQVRDLAAVTTTSSGEVIGGSVTGQLPAIVNGLGNLSVGLSNTVRQGTGIRMSVSFTPVDAFPSDG
Ga0256364_1091722Ga0256364_10917221F100446TGGKSFSFSTFIKQEGERLQGTIARKGNEWALESNDDGDVIFTSNGVSCKAPKVIGRKYKNIVAVSSATEQKIKIVVDGKEACSVAGKLFTEPLDAPLNLGSISDHIQAKVAKPTYIASGVRSNEIGLFSKEKPECIGA
Ga0256364_1091782Ga0256364_10917821F016245VFNAGGVVQFWFGGVTNPSSNQSQVNNLEAVTTLSTGDVVGGSVTGVLPAIVNGLGPLSVGLSNTVRQGTGIRMTVSFTPVDAVPSNGRLIVTLVGAGFACGANTAVTFLSPAGASGSVSISAGLVLTLQLSGGVFNAGGVVQFWFGGVTNPSSNQSQVNNLEAVTTLSTGDVV
Ga0256364_1092257Ga0256364_10922571F068878MTEKAKKWSDANVDRLMKLVGSQRPVSAATVENAANQLGEEFTARSVASKLRQLEVEVASMAKEKTSAFTEDEGAELAEFVISNSGELTYKQIAEQFMDG
Ga0256364_1092538Ga0256364_10925382F029333ESFAIVTTICVLVGVATEPVAPLPLICTLGDPALAKKPDGYASVMLLPAASAPPAVVVNENVAAAPTLPATRSDAAIANEALVT
Ga0256364_1094708Ga0256364_10947081F082153LELPAVAAPMVRPVTVTVTPLLAATAALVVTTIWVLVGVATAPPLTPLIVAAGDPVLEKKPDGYVSVMVPPIASAPPAVVVNEKVAAAELLPATRSDVAIANEGLVT
Ga0256364_1097702Ga0256364_10977021F100451MELCCHHLGDMILGCESPVDMQHRFPTLIGAKALTAKDRYDIVTADLWIHGDDFVEKVVPELQAQQREEFAKAKAAGMSDPDIEQKFGKPIPDWTLESTQDERAFMKEVPGQEANPTLRVPAIKINDQQPADEGFEIGHHWWG
Ga0256364_1098994Ga0256364_10989942F095362VNIPVQAKFIEWFYHKSFPSYDSNRNRNGFLNDMLDLNKIDHDALQYWI

 ⦗Top⦘



© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.