Sample 3300026222

Basic Information
IMG/M Taxon OID	3300026222 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114298 \| Gp0128142 \| Ga0209862
Sample Name	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	228462733
Sequencing Scaffolds	76
Novel Protein Genes	79
Associated Families	78

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2
All Organisms → cellular organisms → Bacteria → Acidobacteria	6
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1
Not Available	17
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5
All Organisms → cellular organisms → Bacteria	20
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1

Ecosystem Assignment (GOLD)
Name	Permafrost Soil Microbial Communities From The Arctic, To Analyse Light Accelerated Degradation Of Dissolved Organic Matter (Dom)
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil → Permafrost Soil Microbial Communities From The Arctic, To Analyse Light Accelerated Degradation Of Dissolved Organic Matter (Dom)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → wetland area → leachate
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Arctic
Coordinates	Lat. (^o)	68.6137	Long. (^o)	-149.3144	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F002897	Metagenome / Metatranscriptome	522	Y
F003465	Metagenome / Metatranscriptome	485	Y
F004238	Metagenome / Metatranscriptome	447	Y
F007106	Metagenome / Metatranscriptome	357	Y
F007495	Metagenome / Metatranscriptome	350	Y
F008201	Metagenome / Metatranscriptome	337	Y
F009276	Metagenome / Metatranscriptome	320	Y
F009354	Metagenome / Metatranscriptome	319	Y
F009686	Metagenome / Metatranscriptome	314	Y
F010345	Metagenome / Metatranscriptome	305	Y

Scaffold	Taxonomy	Length	IMG/M Link
Ga0209862_1000085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	33425	Open in IMG/M
Ga0209862_1001244	All Organisms → cellular organisms → Bacteria → Acidobacteria	7932	Open in IMG/M
Ga0209862_1002092	All Organisms → cellular organisms → Bacteria → Acidobacteria	5668	Open in IMG/M
Ga0209862_1002967	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	4514	Open in IMG/M
Ga0209862_1004770	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3334	Open in IMG/M
Ga0209862_1006459	Not Available	2751	Open in IMG/M
Ga0209862_1007931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	2433	Open in IMG/M
Ga0209862_1009256	All Organisms → cellular organisms → Bacteria → Proteobacteria	2213	Open in IMG/M
Ga0209862_1010104	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2102	Open in IMG/M
Ga0209862_1014693	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0209862_1000085	Ga0209862_10000855	F064245	MDELVQKYARQGHPSTEELIAAQGLTFPRDPQDLLGSFWPEEESIDDFLMAMREWRGHTKTDPAA
Ga0209862_1001244	Ga0209862_100124411	F042939	MHAVEVAFESIQVSGPEPAERSQPGIHLLKRFRLQPVEATLCVHRGFHETGVAQHSQVLGHGRLRHTKLTLDLSNRLL
Ga0209862_1002092	Ga0209862_10020923	F002897	MAQRAIRFSETTDKEIQEATRKRGFSSPTAFIRHSVEQELSGRSEELVGAEERLAASIEQVRREVFRFGRAQQALFAFLDSLAKVVLTCVPEPGGEAMEAAVARARGRHARLLKSAGQAMVGDSQLAMQDLVNRGEG
Ga0209862_1002967	Ga0209862_10029672	F009276	MGVVIIPFDYDQLPESQRKTIVPICIASADRHGNPIARIWFEQGVVPVQNQLRSLARYKLGDVRRVSELAEITVHKLWERHGEDAGTMPWRRVLVRAVWEARDLASGGSLWRIKHTVPLALGSLEGDLYGNGLTDPKRYDKVYEQQLLLDLVEHRIEEDHREEIREIFRMLREGYTWEEVAQRLGERTPAALKKRFWRWIRQNFPRKP
Ga0209862_1004770	Ga0209862_10047701	F075916	MTVIELPDEQAAALKAKAAAQGLTLADFIRKLAGEETPGQAPLSPQEAAARILELQKRVRPDPEGWTVHDYINHGRA
Ga0209862_1005883	Ga0209862_10058835	F031045	MPLENHEKARFLLHRALVEGISLEDRRWLDAHVGQCAECGRYADLSARAVRALDWFALELDPAAALRVENIVRSRAEEMRSAESRAKSLWIGTGVAIFLTFTGS
Ga0209862_1006459	Ga0209862_10064596	F009686	MTEREMFEQTFKRPRDYFKLSDQRQWEIDSELGILDWIGVGLSEEDRKRYVEHYSYPWETKGE
Ga0209862_1007931	Ga0209862_10079311	F011112	VPAKPAWYSKINDVIGELQSLPRPFVDRATVEFLLGVGRRRAQQIMAPCITDHVGTNGLADRDRLITRLRRLAGGDDGYYEVQRRRQVASVIDRLRKERMERPQLFVEAPACIVNQKFENLPAGLRLEPGRITVEFDNPQQALEKLLALAMAIGNDSDCFERQIVAGPRTVKIAAVG
Ga0209862_1009256	Ga0209862_10092562	F026364	MGRRGGRSKSLAKRKAARRNGARGGRPRATDLFARKLQDTCARLVPQLPQVDPGDLRLIVRCLLLPPARRAVFITRRQDGRYVF
Ga0209862_1010104	Ga0209862_10101041	F014076	MPGKGFMVREQHRMLLTAHALVMITGLLGCALANRRYSPDRFWVQWVALAWGSLFLAHLWWFSRGTLASMGRSRR
Ga0209862_1014693	Ga0209862_10146931	F012694	MTDETKNPSNKVDPSTGGKFHAFWRGRIVFENGRVKRFETENEAWEFLARCDAAGKIIH
Ga0209862_1015206	Ga0209862_10152062	F012075	MNLAGGEPEDFEMKLISAALCMAAMCAAGLGAQSSTTETKTKIEVKDGKEISVSGCLERNPGGGYMLTTTQGALKYSLVTDDDLSKHVGHRMEVKGKAADRGDGKVKIESTVGKGDEKATSKTEVKGDMAGMRYLGVKSVKMLSASCM
Ga0209862_1015834	Ga0209862_10158342	F011929	LASSIEILYLRFPVHPNITVIQIGPGIARIDKEGDSYFVIGTEDGPLAGKRVEIPGDNVAAVQWTMEGDEPAAAGSS
Ga0209862_1015933	Ga0209862_10159332	F052849	MLKILVVNAVIVEPVSTPKFLANRDISREFRQIRSLCEILNADTRAISKAFSQIPYATEQGIISAEQGILTQEQGILPTKSEIIIG
Ga0209862_1016043	Ga0209862_10160434	F039789	VDLWTVGCAESRLTAQARSPMDKPGKTHGVSPTLPTGRRLPTSFTAPQQQRGLN
Ga0209862_1016538	Ga0209862_10165382	F019018	MLRSKMATLLTIVSAMLISAGMTWQQRLLFIGGIAFGVVVEALPSFVDDLKERVAEWRRLRQLTIRTKAA
Ga0209862_1017833	Ga0209862_10178331	F034303	MAAGCAISLVSAALAGWLLIVVGGETGEARMQRSFLAMVVRLAVVVALGLAAALSGEIARQPLLFWIGTAYVALLPLEVKLAIL
Ga0209862_1018452	Ga0209862_10184521	F013002	VSDTDTPESLAWAELQRRGSIHPRYLRGIEAEIGAELARCLDPFVHEQDIRPYGAIVSREMPHLDRLGRLLNTDGLPPDVVRGLADGIHCVVVVVKGEAPQLLLLHESMDTDQDYASHAVWVDGIIICNDGRGIVRIVTDSSVTLVEGRRWIAKDLVYEAAEDIVQVVPAANLDVVRRLLELAHHHFSARKIGVTLLYALTDTVDAPRRRDDGIGVSGLGLSVLNDAEEPLLTHQARYRDGALLVGRDGRLLAVNVIL
Ga0209862_1019205	Ga0209862_10192052	F099932	MLFLAATCVGGSGKQAEGQLRWPEPPMKAAMRLRLVAVALADHPRSSFFPSHEVFVAEKEIGNEEWSLVKLVFTFLPYQPRLSEAGFDYSVVHEVSAWRDPDCDETVAQLTERSQPERHEPLVYSRNVPREDLDR
Ga0209862_1019730	Ga0209862_10197301	F079909	RHDDELHAALDLVVRECVMPEIEDLLFRTVKYPPLQLLFQRLRENDPQRSAEARRLAATIIEDPSGAKVWKIRTRLIATATRALLAAKPLLDELERGGFKVERSRAARGFARRLEEAVGELPGAPILESLLHQLAGDHGPGEAEGENKPESFQTSSYND
Ga0209862_1019996	Ga0209862_10199961	F011513	GRIRALISRNDAAHNASVSSIDAACVHDLRIMVAHGFRNLQKEQL
Ga0209862_1020012	Ga0209862_10200122	F010345	MGILARFWSYSIDTYGGAPLLLLINLIQLALLGWVLGAGFRARAMNGLSTDARRIAAAHRAEIWQKQVRPLALTFMLLGPGLGLGMSTLLGALGMGQLGDAMGTQTSADTLAALMAHAYREISYAYFLMVGGTFPMLLGPLIVLAARKLDEDGQDARGGEPDELLLHTMKSLLAVAEAQASRAQLDAARTQALLEQALRRGMAA
Ga0209862_1022047	Ga0209862_10220472	F088367	MMFDLITIVLVGMVLLFAAYTAMQLLGKFPRRTLDDVTPYLRPAELEEIAELLDPAQEVNFRLRLTPEEFRRWQRKRIHLMREYLLRMSHNSLVLIEWGNLECFEGGSGPRISPERQALAQELVQAATEFRLYSLLALLKLKVWIVFRMDRWPLVSAPSLPALRQVFGIDALTSYNRVKQAAGGLSVAYGRHEFLDHL
Ga0209862_1023402	Ga0209862_10234022	F026723	TNTKKMPVYINLDNAVTVMRDDIGQRTREPGTVIEFMGGEQVYIVVTEQPEEIIKSRSNS
Ga0209862_1023501	Ga0209862_10235012	F084611	VTLPRTLLSDLLFRPRRLAVALLLVAFASKAEEVACQAVLAGTRALIDATVHGLLDRELLRIVKLGVSGRLTVEATVVRRQKLWFGRVVAAATRELPLTWSEERGAFELDGLALPDPEHVSLPRIALSLGEADSPRAYEVEIVTRLVVVTPGSLGHVTGFLAGESDSPLARTLLGAIANDLIRSANGTCPVQPRR
Ga0209862_1023816	Ga0209862_10238162	F031046	MNGLISFLGLMVFLFAGLAQHGDVSKQVGYGIAIPLAVVTMILAIVRYNQRKGRGE
Ga0209862_1024806	Ga0209862_10248062	F007106	MGKKLPLPPWLEHAGVVKKKMKDRGFKMADRVQICEKCVEYAEETWALRGAQGLGGRDICACMNCGRARSWKGSSPRILEEPFDLLGFLDITA
Ga0209862_1026373	Ga0209862_10263732	F004238	MKSASCIERMVSRNKVTIQIPDDLARGLEGIAAAQSKSVEQVALESLRSLFDKAGSPEAVLRSVRALPHPSPAAVEDLEAAILAARLPVHDQGAFDKRSRR
Ga0209862_1026429	Ga0209862_10264292	F012560	CAHVGANHETAAKPSIVAGKYAVESIRSRAQLDGVDQVVEISESGTKLTDGSGSEHLLTERGALMLAENGACRLALAVSVDGEEPGVSDRACTWQVAGDQFFLGDASGNGTKTVYQVRRAEGRVVLEGSADVDGAGKVVGDAHGERIVLVERAAQEFAGRSVDRTSEEQAAREIQESLHD
Ga0209862_1026989	Ga0209862_10269892	F009354	QQNRVARVEKELADYQSQADRPFEHEERLKQVLARQAELNSLLDLDKGDQQAADSVPDLKDEPDMGRTAPPASRGHHEVAKMAAAYMRASGTAIREMPIAERTPPQTGPVTGRAVAKDEAHIAVATGPNSFFVVPSTLLGSDVQIGERLSLRFRQGRALIDNGRDQGR
Ga0209862_1027076	Ga0209862_10270762	F102966	PQVPVRLAAADHGTAVGVLLDWLETQPVFASVKSGLERVGEGRVYALEDAALLPRALRELERRPQINVAGRGRVLARAYLDAERKLDVHLVNLDLRDAGVAAAQGVQLSIAGSAAGGGRSGYWFAADREGGRDGERITLNPSGFSVSTILPSVDAYALLAVPR
Ga0209862_1027566	Ga0209862_10275662	F014830	MPARQLWAFLTEGDVNELIAGIDAREPGLVVSRGRYFKGEPAALLENPAKLERQESLPQERRIYLLHRKYSSAIVTNEQPAGPFVGWSQIDEERTDCLVIRLKDAGAGMLEPAQIYAHVTYWRAADKERKRPMFSIWAGQTMKWLAARLPPTSVKFMRIGQEAQAKARASELKLTYLYRTIAPG
Ga0209862_1028761	Ga0209862_10287611	F063418	MNRLILDDAMETVHGQIRATIAEFHASMQKVERRAGSMLAQEVKESAARMQRGLQNDIHTAGLKAREIVHLVNEAHRRPALIRWSAVGLIAGALLFGGGVWFGTMLH
Ga0209862_1028959	Ga0209862_10289593	F067057	ANVFFQSPDVEMLRVFDLLDRGFDPDSAIGWMNTNGYPTTAVWYPGPEKAVIGLHYVYLASRNKITVNGTWEVVLRVE
Ga0209862_1030028	Ga0209862_10300281	F043376	MSETATFRTRTTKGFPRWSMTRYAAARPNIGPASHSTPRASPKRVVNAAQSKPISQTSRRNNVIPEPSRLLHTHIRPIKSP
Ga0209862_1030805	Ga0209862_10308051	F019292	LIIVGVPAALFTLSGVRAYQLAQEGEVPEAFRDLNCDGKVTPAEWLRGGIDFRLRPSKLVEGCQDVFMVKSEEAVVVRCEAAPQCRLVHDLKR
Ga0209862_1033674	Ga0209862_10336742	F044476	EPESFDLIDLREEQRLARLAALAARTDTDPHTFFIVKQHVGIAGGYDNGIVHGSVGYYITVAEWGRWNFGVPSIEIGMGRYPAIDRLSQQPIMKDQLTFLVSIASAHYRVGYVRAWGLNWYLNLEQVFDLHANRAGSQFGFSFSPK
Ga0209862_1036645	Ga0209862_10366453	F003465	GMDETTTTPTIEMSLDALSDALAKSSDDLRAVRGTLTVARADIATRNTSLSRNVVAHAEQVIVHLREADESLRDVLRDLSQRD
Ga0209862_1039978	Ga0209862_10399782	F066119	MPETLRAVKGIMSWIWTQRTKVLVLILVMTLVAPQPAKGQLIDGAAIVAAIGAINTAITTVIGAGLRDISGALNAVNGVLNAIQSFFQNTVYPPDAINRARGVVG
Ga0209862_1040933	Ga0209862_10409331	F018980	HGPHLHADPQAMAYRSRSKVPDASAVRIAAEAVGDARRRPAWSEPNHVHAADGPFGNGHDKYLYGEARLYLVEYETDPGKFRDVDAHDDAVMAYADALFTFQQLQRWSREGGIDWDVRLFRATGRVTADGPDADARAVLAKLAETAGSPKDVESLRTALDAKYRDRR
Ga0209862_1041959	Ga0209862_10419591	F020038	MVKNVDEVLRQLQQQLKDQQKQWVTQLRNHPAKFADLEAGIHQIFDGLADQVVAGVLAQATAADDFAQDAKKK
Ga0209862_1044157	Ga0209862_10441571	F045781	MFYFQSMFQQVYNGITGSGVLPAVQQIAEAILLLAALFAVYEAYAKGGD
Ga0209862_1044232	Ga0209862_10442322	F069485	MASGLCVPHQQAAHMAAPTEGQNIKNTLANGEPSTHGAKRTLADFSELD
Ga0209862_1044929	Ga0209862_10449291	F029543	KGTVVSGIYPVLAEIQKRLQAHPQEWLKALKQNPGGFANLEQEIHQTFAQMADCVVAGLLAKATADSAFADAAKKK
Ga0209862_1045742	Ga0209862_10457421	F069388	KLAIIDNRIVGIGDEVRGARVIDITPSAVMLRDDKGRLRRLALATGGR
Ga0209862_1049521	Ga0209862_10495212	F047868	LFAEMPLDNRTVDKFAAVAASVGFLRPLETSPRTKRSNISSRVFVL
Ga0209862_1050101	Ga0209862_10501012	F031835	MTTEQTSAPAAKATTPEPSNVVLQRFLETSESARLAAGSLKKAAEVAVRFTDVPGDFHFKVIDGKPRFIAGAADDADFNLTMAPGAVAAIAAQPNADVGDLGILFFQHILSKDANNKINVKLHSGLLKLTMRGWLGVVYQGGGKVMGWMASKGLRGPSAIASAVSKLKKG
Ga0209862_1050484	Ga0209862_10504842	F078124	EQLNRAAERTNADVLVIGHSPQRGHLGDNGNGYGLIRESRIPVLSV
Ga0209862_1051017	Ga0209862_10510171	F073908	DDLWEHAGLSALAALEGGKPLPGKPPPPDVLVLGHTHVVDWAVAEGARPGIERLYVNLGTWSARASDAAGPMDATMPLLRIDADEKVLRAQLFDVAGKWRTLQRFEVKR
Ga0209862_1052090	Ga0209862_10520902	F008201	MPKILRSGAALLTVGVLACLVGFVHSRVAGGPAEAARPWMYGLLVCFGLMALAAIYMAAVGAYHTVLALFGWDGGPGIIRKNPNYIPGSDEPLADGTRLE
Ga0209862_1052498	Ga0209862_10524982	F016310	VEFLRRIGRPAGPIDEGCCGSLDVEAGRAMPGRAKAGVVADPICLEQYDAEFLGMLAMQHLDLFELPMPFYYFAPHRIVNREHAIAYPLYDALRGRFGCDMNFELNRLARSTSAGSVQGLSGRDARDIPAAVARLLQHSRAERIITCSPADYLAFREYSGRETRFITECLR
Ga0209862_1052706	Ga0209862_10527062	F038394	MPFMSRLRRRLSWLVGIWLLCQVANVAAAPLTFCCQNVATDDEEEKCCPGLLPGQVCPMHHTKEGVRTCKMRSSCAPSDAALVGLASGLGVMPHTTAAVNAFALGAAPRLAPPSAIVHAYRPESPPPRA
Ga0209862_1053172	Ga0209862_10531721	F020950	CVGLIAGTVIANAYKHRDSSTTAPAKSEGSGNMKTSIVIAAFALNALAIFAGGCAEHRMDAAASRDDTRRTEFEHCRAQGRTDCDAILNAPVNSNTPRGDAVRDQEARAAYNRCVARGGSDCDNLLHH
Ga0209862_1055865	Ga0209862_10558651	F041696	FDAQLPLAEVALLDDLTGGRDEESALALDLGALSSLHPQAHPLAVFAAVERAHNRRRGEKERTQFSARTIEARISARGFPEPLHDVTPDFAARAGDFLPAELQRLFEASELLEKT
Ga0209862_1055948	Ga0209862_10559482	F077820	HAGLAIAQGPELSLYRDRAVVATAVRLKQPEMFAHRRDFAIDGGPAVLSDASRAYDPARDFQVLESAYRMGPQHSLHWTITVRNSSTSVAFRDPLYVTTYLDEHGAVVEERHERLKHIFQPGDTRTLEVSDGFAGPAFATARLRIVAAEALLPTPRD
Ga0209862_1056700	Ga0209862_10567001	F049712	MKAAVRQQLDPSIRSTDTRDFETTLRSKIVGQVEGVQSLVMKLDRYKLR
Ga0209862_1057334	Ga0209862_10573342	F103709	IGVVGTACRKGEPGNWGRPVAGEGSGLDVVAGRRLRRVSDRAVVLPRLGNASGGKGPDFWRAFEVGEDGVIGDEPSNT
Ga0209862_1057512	Ga0209862_10575121	F016214	ATVDVSVTNFTQPVVTSAINPADNLVGFQGDFTFDETVVTFQSPPVSNAGLTAGNWNVSANVLAGAGPIRTLRVSAFSNDFTPLSGSGTLFELRMTRVSKAAQGTRLIWAAPPDQFIFIDADLNTQNPGDAVAGIVRSLNR
Ga0209862_1061233	Ga0209862_10612331	F061060	PSLVINFFMAGPEMVRWELIAVDSDGPYRLTVHHAQGVIVEYFETSAAALMREQELEDLLIAARGAR
Ga0209862_1062634	Ga0209862_10626342	F084292	MTLAERISEVPELYEEGNESTARLLSKSGYLDAPQALTVEDVEQALARHPELADRWLERGNDQRLAGGWGIECDHGQYRVQSYAGGRHLLE
Ga0209862_1067534	Ga0209862_10675341	F058295	ACLYGYVRLDECSGFHPRFAGRLIHRVYESEGVSVWNGRNKLFLRQLTPAGTRPNVYLFRISAAETGWIDRGGAWKCDAAQVVSFSEGNGQQELLLVLPAFGWVHGERGTFCVDPRQDRPWMAALSRAVK
Ga0209862_1068068	Ga0209862_10680682	F025957	EDLKLPSDSKTADVDYSKSKQFHFYKASLKEKGKLTITFKVLQPQRGSKVAAYFMRAPDEDGDKISGSTVTKDIDSPGDYYVRIQAPDSGDYGKYALATIWSPANFIPADVVEIGRSPCMLTVSAGSNQGVRQGVSCTVVSATGQPLDSCVVDQTFPNLSKVKPGNARCNVQPNAKVQINAQ
Ga0209862_1069588	Ga0209862_10695881	F094778	MTARPQIPFVLFKEDKDRLLSLQEDLKVRTRLDVTLGGILRLVIRLCPLDQTLNLKVLEILEDDRRRKDGGAGHKKRVTRMSCMVTPQEEEKLETIMKLISPILRPKIKKSSLARLVLRMTPSSLIILHTTREVFFDDLRR
Ga0209862_1070011	Ga0209862_10700112	F033176	MDPKLTILFLLIGCVVLLSHLNEENLGRMRRQIASRSWRDLVPVRRRS
Ga0209862_1070260	Ga0209862_10702601	F073790	MARFGTLNTAWMVWDNPAPAPEGAVLEYTKELEKFLAETERRAFRIAQ
Ga0209862_1073459	Ga0209862_10734591	F072535	SLLGLIRMESKNFDESIGMADYDNAMLKASSLDIAKPSLSMRH
Ga0209862_1074032	Ga0209862_10740322	F072418	DFVTPLGQNWIIMTNNQSGARLSGHATDEFGEYEINGRIVDDQVTVIWSVAEDGKMLEITMKGKLESANVITGTAKLGDVGEGPLSARRTGDAGDH
Ga0209862_1076337	Ga0209862_10763372	F084999	VEYSPGATKKDGRILVLAAAIITGLRLARDPRAGSKTERVINAIEDGIFLANQIYDKALLRFGDG
Ga0209862_1078056	Ga0209862_10780561	F007495	MTVEQTALLRRLALEAYELDAFGCHLTQAEANIRIAALTAKLKLLDEPPHTL
Ga0209862_1081241	Ga0209862_10812411	F024366	LLHTLRFRMRLAIMRNFAAAHGAGNSPKRPRLFKARAMKWVLPVLGIFFLMMGADSAFAQVQTCAIITGGDAGAGRGVSPTYLANQDGRANQGCTILITLNADGSITTTFPNPAPSYDNGADDNLIGVVNNTSKTVTALQLTSATVPIFGLEDDGVCGGPPGWTFSAAGPSPNCAIATDP
Ga0209862_1082827	Ga0209862_10828271	F012694	MTDEIKNPSNRVDPSHDGKFHAFWHERVVYENGRVKRFETESEAWEYLARCDLAGKIIH
Ga0209862_1082827	Ga0209862_10828272	F092929	VRGGKYYFSAAKHDPSPTVNRKSPNSQPKKTNGVERKNVRRQHIFKSDDWYETAVLSVTIKR
Ga0209862_1083182	Ga0209862_10831821	F012292	DAVQKFPAPVSESVDSLIERARDFRAKVGYETALRECRTETETADALAAVDQIIRNLAAGDASVANLELANFLRNNPEPMADNQKTLWHYLTSMRSLFSRSRKEAEVHLQRAQSLDSTSKAGEAVREYREAYRAFPTPATADKIRQLQNTSLGL
Ga0209862_1084472	Ga0209862_10844722	F053999	MQQLRKSAIAYGCLVVLAGLCACGRSEPRSPIVEKVEQAGSGNLATVSKDGMREWLGKHKDVAYQVDEMCKPVRQKATAQWAESTEGRLCTVARELAFWRSGPVTSDHKTYLPGLK
Ga0209862_1084694	Ga0209862_10846942	F037250	TIGRLIRLGFSIMSAIASFFDAGSGRSLKTGLRVLTKSRNRSGSMCCSRNARVGGSRLMSIWVTSTPAVSRKLLAFLQVVHVGFV
Ga0209862_1088201	Ga0209862_10882012	F012393	MVEDRQVTTEDVLEAARRRRRLCDDVEVDDPVTADAVLTAFEARMEQRLDLGVVNRALNVFLEPRNPFEPERTRKAKVETVILGMLFGLVVAAFLFFNLAAPRL
Ga0209862_1088562	Ga0209862_10885621	F017331	MLATKIRRAMDRMPNAADLTSAEYASLMLIRHGFTSAPIPKSHQARLVKLGLIQAILGGLMITPMGRMVARA
Ga0209862_1088865	Ga0209862_10888651	F027573	RAQQALFAFLDSLAKVVLTCVPEPGGEAMEAAIARARGRHARLLKSAGQAMVGDSQLAMQDLVNRGEG
Ga0209862_1089314	Ga0209862_10893141	F025585	MMPTDHLFPKGAATVRDSQPMMASKLELSPCAVSVLGQLFVEGPTSDDNITSKAGRCDLVSAGLAF

Showing 1 to 79 of 79 entries

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026222: Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences