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Sample 3300025774
3300025774: Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-4B (SPAdes)
Overview
Basic Information |
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IMG/M Taxon OID | 3300025774 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0084162 | Gp0116224 | Ga0209586 |
Sample Name | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-4B (SPAdes) |
Sequencing Status | Permanent Draft |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Published? | N |
Use Policy | Open |
Dataset Contents |
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Total Genome Size | 63850416 |
Sequencing Scaffolds | 15 |
Novel Protein Genes | 17 |
Associated Families | 16 |
Dataset Phylogeny |
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Taxonomy Groups | Number of Scaffolds |
Not Available | 10 |
All Organisms → cellular organisms → Archaea | 1 |
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → unclassified Methanosarcina → Methanosarcina sp. Ant1 | 1 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094 | 1 |
All Organisms → cellular organisms → Bacteria → Proteobacteria | 1 |
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon | 1 |
Ecosystem and Geography
Ecosystem Assignment (GOLD) |
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Name | Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa |
Type | Environmental |
Taxonomy | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil → Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa |
Alternative Ecosystem Assignments |
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Environment Ontology (ENVO) | polar biome → peatland → peat soil |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) |
Location Information |
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Location | USA: Barrow Environmental Observatory site, Alaska |
Coordinates | Lat. (o) | 71.299 | Long. (o) | -156.61 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map |
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Associated Families
Associated Scaffolds
Sequences