NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300025408

3300025408: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU001_MetaG (SPAdes)



Overview

Basic Information
IMG/M Taxon OID3300025408 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0116197 | Gp0138789 | Ga0208462
Sample NameActive sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU001_MetaG (SPAdes)
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size210669213
Sequencing Scaffolds33
Novel Protein Genes41
Associated Families33

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → unclassified Candidatus Methanofastidiosa → Candidatus Methanofastidiosa archaeon1
Not Available9
All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA1665
All Organisms → cellular organisms → Bacteria → Terrabacteria group1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.2
All Organisms → cellular organisms → Bacteria1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1
Methanogenium → unclassified Methanogenium → Methanogenium sp. MK-MG1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus marisnigri1
All Organisms → Viruses → Predicted Viral1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae1
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin0091
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon3
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin1011

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameActive Sludge Microbial Communities Of Municipal Wastewater-Treating Anaerobic Digesters From Various Locations
TypeEngineered
TaxonomyEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge → Active Sludge Microbial Communities Of Municipal Wastewater-Treating Anaerobic Digesters From Various Locations

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationChina: Chengdu, Sichuan
CoordinatesLat. (o)30.66Long. (o)104.06Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F003987Metagenome / Metatranscriptome458Y
F004383Metagenome / Metatranscriptome440Y
F005744Metagenome / Metatranscriptome391Y
F009968Metagenome / Metatranscriptome310Y
F010099Metagenome / Metatranscriptome308Y
F017851Metagenome / Metatranscriptome238Y
F018746Metagenome / Metatranscriptome233Y
F033857Metagenome / Metatranscriptome176Y
F034940Metagenome / Metatranscriptome173Y
F042353Metagenome / Metatranscriptome158Y
F043951Metagenome / Metatranscriptome155N
F045124Metagenome / Metatranscriptome153Y
F049068Metagenome / Metatranscriptome147Y
F051949Metagenome / Metatranscriptome143N
F053314Metagenome / Metatranscriptome141N
F063807Metagenome / Metatranscriptome129N
F064746Metagenome / Metatranscriptome128N
F068989Metagenome / Metatranscriptome124Y
F071368Metagenome / Metatranscriptome122N
F072475Metagenome / Metatranscriptome121N
F073228Metagenome / Metatranscriptome120N
F074119Metagenome / Metatranscriptome120N
F084407Metagenome / Metatranscriptome112N
F085852Metagenome / Metatranscriptome111N
F088355Metagenome / Metatranscriptome109Y
F091989Metagenome / Metatranscriptome107Y
F092293Metagenome / Metatranscriptome107N
F092294Metagenome / Metatranscriptome107N
F094051Metagenome / Metatranscriptome106N
F102132Metagenome102Y
F103497Metagenome / Metatranscriptome101N
F103500Metagenome / Metatranscriptome101N
F105430Metagenome / Metatranscriptome100N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0208462_1002716All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → unclassified Candidatus Methanofastidiosa → Candidatus Methanofastidiosa archaeon8948Open in IMG/M
Ga0208462_1003833Not Available6239Open in IMG/M
Ga0208462_1005711Not Available4205Open in IMG/M
Ga0208462_1005822Not Available4135Open in IMG/M
Ga0208462_1007619All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA1663206Open in IMG/M
Ga0208462_1009048All Organisms → cellular organisms → Bacteria → Terrabacteria group2770Open in IMG/M
Ga0208462_1009542All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.2644Open in IMG/M
Ga0208462_1010022All Organisms → cellular organisms → Bacteria2537Open in IMG/M
Ga0208462_1011483All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T2279Open in IMG/M
Ga0208462_1011495All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2277Open in IMG/M
Ga0208462_1011994All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA1662198Open in IMG/M
Ga0208462_1012343Methanogenium → unclassified Methanogenium → Methanogenium sp. MK-MG2143Open in IMG/M
Ga0208462_1014933Not Available1840Open in IMG/M
Ga0208462_1015878All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.1753Open in IMG/M
Ga0208462_1020049All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T1462Open in IMG/M
Ga0208462_1022347All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae1340Open in IMG/M
Ga0208462_1023343All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus marisnigri1298Open in IMG/M
Ga0208462_1024034All Organisms → Viruses → Predicted Viral1270Open in IMG/M
Ga0208462_1027274Not Available1151Open in IMG/M
Ga0208462_1029835All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA1661072Open in IMG/M
Ga0208462_1031795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae1021Open in IMG/M
Ga0208462_1031961Not Available1017Open in IMG/M
Ga0208462_1036532Not Available914Open in IMG/M
Ga0208462_1037441All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009896Open in IMG/M
Ga0208462_1037836All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales888Open in IMG/M
Ga0208462_1039565All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon857Open in IMG/M
Ga0208462_1040959All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon834Open in IMG/M
Ga0208462_1047915All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon732Open in IMG/M
Ga0208462_1048582All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166724Open in IMG/M
Ga0208462_1055283Not Available651Open in IMG/M
Ga0208462_1071093Not Available525Open in IMG/M
Ga0208462_1072289All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin101518Open in IMG/M
Ga0208462_1073480All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166511Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0208462_1002716Ga0208462_10027168F074119MSEIQVFEVLAKILPYLVTLGIGAFAGWELVKTKIHELAEFFKTVDEALYDDAVTEKEFRAIWEKGRALFQWSFAAKKGEA
Ga0208462_1003833Ga0208462_100383311F005744MDETFEIIKAGAADAPPEQALYRIQQTYPDGSGGRLNIDWEGLLRVHELIHDRIALEGYVCETCDTKGCHRPATWEIECRGVGVSGRLIYSCDEHCPDPAILSPQDEMRRLVEE
Ga0208462_1005711Ga0208462_100571110F068989GLYAPEEIDTGDRPEPRYVSEVPPATPTTCEVCGIPVPEEIREKTKPHTDRVLCVGCFSKWWNEQKEVQA
Ga0208462_1005822Ga0208462_100582210F005744MDETFEIIKAGAPNAPPEQALYRIQQTYPDGSGGRLNVDWEGLLRLHELIHDRIALEGCVCETCSTRGCHRPATWEIECRGAGVASCLIYSCDDHCPDPAILSPQDEIRRLAENRKVD
Ga0208462_1005822Ga0208462_100582216F034940YRAQYAGMTKVCMRQSIVECGRIRRFGLCPIPPDSEAWRRCGFAIGQHEIPMMVEE
Ga0208462_1007619Ga0208462_10076194F003987MIPALPCGTFADSETPAGAFYVAAFEPGDAPHHVGEYRIDVVIRALQALQACGYDDVEVGSIECSDRTHLLLIGLDGEARFGDTQMGCVAVHPVEVE
Ga0208462_1007619Ga0208462_10076196F004383MTGPATRDNPLERAFMARIRADELRAELATLQKEFDEREDVVALKRRIDRCDHERQTCIEQAKAAGISKIGNYLLKIRTRKTRTVIPKLFFAKHGAEAFVECCTVAIGKAEALLGKSALDDCCEVEVKETGVSVEYERPEAGE
Ga0208462_1009048Ga0208462_10090484F053314MRTARSTVVVQDNVVVREWRNGVAVRTFQVHNTWGTAGLNMIRDWFAGLSRVPVTHIAWLDAGGVERARDIVTQRVLPGDGSLLIRQYLPSATSANGHTLTTIRAYNAQSGGTQFAEAVFDAIGIAKTANNQITVEWTHAFADGSG
Ga0208462_1009542Ga0208462_10095422F091989MRLHDFAHDIINRARANGYATDASKASDPLIRPFGEHDEQKGTLMSLQGSTLALCWVNAEGKAVPFNEAEFNSVQREIAVLQAKIDHNAAILEKLDAKVAEQGLTEFSLAKLKSQKEKLRMEIAQIRAEESDALRSKWESVVSLGGNRATYDALPEVIEARAKAAAQIEPIEAEILALNAQIRSLESILSKFKR
Ga0208462_1010022Ga0208462_10100221F102132MSTKTVIKNIEATINRICTDIKEKHGGSGADKLDSLSKLINSYSRLLEREKNTGYNPTEDGDPMYYQRLRDKAAGKKPVAG
Ga0208462_1011483Ga0208462_10114831F017851MTPTLSRQFFETFPPDVARAILEGRPLQIHAAKVSVVREAGTTGFAIDTLPAAGRPAEWEKTTQRICRILKDEVERMPWKTKQALAAVAHILPAGEPILLFQVETWLSMKDDGGSWWEVPAYLSL
Ga0208462_1011495Ga0208462_10114952F071368MDDLPHPVTTTDTYLARIVSQNDEIIALLNQQRPEPKQPRRLKEPKE
Ga0208462_1011994Ga0208462_10119944F003987MIPALPCGTYGEQDTPAGAFYVAAFEPGDTPHHVGEYRIETVLRALQALKACGYDDVEIGSIERGGKTHLLLIGLDGEARFGDTQMGCVAVVPVEVA
Ga0208462_1011994Ga0208462_10119946F085852MSFAPSEVILGATLPLENGSTITFSVAGHIETERDCDDAVVIFGRKLLKYTNSASDADRLTVRQVVASITSTPLDK
Ga0208462_1012343Ga0208462_10123433F033857MVEIIDLSTLSPKPVVVRIGNGDEIEEIDLTIVPARGTLLLAQATQKYGGWDKIPDDEMIPAIAAICQQSNPKITAEWLETKLTRPQLAGLTQIVIAQAFRRWGGGDKGDGTEGDGKNQ
Ga0208462_1014933Ga0208462_10149332F072475MSESFASRFMSPEEKVAMIARDPQSAQALTNAPRTGFAHNCYAGGLGMFFQKTIKNTILEKFLDQAWQGFLKYRCAGSKAAYREAKKNPDAVFQYDDPLLACLNRVMKESIAEHHTDNDAARKQQLMRQATDITLTLLNEDIYYRARCKEHLRDILAAVAEHPEYLDLSLEEEQNIRRWNGCSP
Ga0208462_1014933Ga0208462_10149334F084407MPTSGNVLALLPVLTPYTATSAQFDLLYPYALDEFEGDDPGCSKTGAERALAYLMAHYLAGGEDQIGFSGEKIDDYSYTVAGPAATSSRWYVLYRQQLDRCRDALAIGPAALAGVQHADVSGLSDLHLDQNPVVRVRRDSDESP
Ga0208462_1015469Ga0208462_10154693F103497MAESDPTPEETRVTRGTKAEGEVSFQSSENAYTAPAITPETARNYFEQNIHLATQIVNLLPQVFPGAPDIYVEDRDLERVDDLSKWIARVAEEVGIYPSMKTAWIDTMSHGCSVKSAGYAFRNGRYEIDEIRDLPAITFRQPPRTLGMFQAPPNPLMPGVVWDVKEKRVRVFQTLDDTLALHELKNFTIIRDPSTPFPAGRAYCLPAYHVIGAINHANQAADQQVHRVGAPLIFPQIIETITADLKTWGDNFVRNWGKDTGFVIPPGVAFPDVKIRENQTAADRLKMLVSWLEVYFNPTTVLQSGAGTVIGASDSGAMRVWNNFIGGTQAWIEEQYEAFLQPILTANGYDDLNVRIQLKRPELDRSTVVTEQLRIGIEGRSLTREDIRRNLTELDLGELTDEIRAELDATYPAAPSMVFENLAGFSRKEGRPISAAERKIAAANLASLRAIERILERGGE
Ga0208462_1015878Ga0208462_10158783F064746MAKISLIIFLGICAVLVCGCLDTAAEQKSVMIDGYTFTASLNDKWVNSSGDVSKYKPANLEDIQFGIPDGAYDWSGAENYNAFLYRSGEPSGSMTKYGWANIFVLKPDDDLSDSSSIDISKHAAYMIINPKDHRNAVIGGDLTEKEIEYNGRQAYYIEVEGELITLENYHTFINDNSLGAVAFFLDDNTVALIDAFTTNDFGMSAWDVIDSITVS
Ga0208462_1020049Ga0208462_10200491F105430MTSAASQQFFETFPPDVARAILEGRPLQIHAAKVSVVREAGTTGFA
Ga0208462_1022347Ga0208462_10223472F009968VRPSTCTGCRSHYRERHWWIFELDFCGLSGDVVGFECPIGCIDTEGCTAYERRPAWPEGAVA
Ga0208462_1023343Ga0208462_10233433F018746EALNDFEAAVIKALEQHPDHTILAADLVREFTIRAGRTSCIARLEAMERRGRVRTSRFAGRILVHLPVEE
Ga0208462_1024034Ga0208462_10240342F094051MADTGVLGELHISGTWAQKRMILPVIMAALEETNLAAPAICPTLPYNKLKGTIPMLGNVPVASQLEEFESAQAGTGTPSSYDIELLKDRVVLAVSDEAKIESDVGDPMSLQQIQAAGALASNLNKLIAAKLNATPQVYNTDGDLGNWASAKPTLALNKLAIAMGIYRPTAYVMGTLAAAYYSDAVGDKAAVQNIAEWRGAILRHPTQNVPIYASTDIDALDDTSGNRLVFGVCNKVPGVINVLGQVKARTYDDPKLGAEVNQYDIWRTPFSNLRQTSGKNLGVMRGYMTES
Ga0208462_1027274Ga0208462_10272741F073228MAITIGDIMDINSSKYGEFLYRIVMVFPHNLEVDKTELARLIKINNNTLTFERKNGEKFTLDERDIEHMDLFRSPNYRGGE
Ga0208462_1029835Ga0208462_10298352F004383MHCDCETSCRECKEEEVEIVDETPLLLESAFMARIKADEYREALAALQKEFDERPDVVELKRQIEYYEEARRRRIAQAKATGITKQGSFLLKVRTRKTRTVIPERFFARFGAETFVKCSTVAIGKAEAAVGKGTFDDCCEVEVKETGVSVEYERPEAVE
Ga0208462_1029835Ga0208462_10298353F003987MIPALPCGTYGERDTPAGAFYIAAFEPGDTPHHVGEYRIDVVIRALQALKACGYDDVEVGSIECGGKTHLLLTGLDGEARFGDRQLGCIAVLPVGVE
Ga0208462_1031795Ga0208462_10317952F088355MKDIKNKLSVFAGQKGQLVLAILTITLFVLAAGAPNATIGIGR
Ga0208462_1031795Ga0208462_10317954F088355MKNIKNKLSVFAGQKGQLVLAILTIVLFVLAAGAPNATIGIGR
Ga0208462_1031961Ga0208462_10319611F034940YRAQYAGMTKVCMRQSIVECGRIRRFGLCPIPPDSEAWRRCGVAIGQHEIPLMVEE
Ga0208462_1036532Ga0208462_10365323F043951MEHLSLGRPIEASLGPRYQCPMCGQNLWTIQAPWTGWQEWYRTEDGRRHYKHSCNIMRDALVMFRRMFGQDW
Ga0208462_1037441Ga0208462_10374412F018746MRPTSETLNDFEAAVLAALEQTPEKTVLAADLVREFSTRVGRTSCISRLERMERRGLVRTSRFAGRILIHPPVEE
Ga0208462_1037836Ga0208462_10378363F063807MKPPRTLSISAALHTRLWLLKIRRKARTLDEVIEQALDA
Ga0208462_1039565Ga0208462_10395652F092294MSCGEKSNAFENLHDVTLQRLDVYHRNNGRYVFYDAKHFAPTVDRWNTVPVIYVETGPGEPAEHPRFEDVVASTLPAKFRKIGDVSVAHLTETGERALKGAITFSDPTIAAKANAGELSLSTGLASPEAPDPRLPGATRIAGPVTPNHVLVFDRGACPNCYPNDSGAMFHNLRQEPKMDDESKG
Ga0208462_1040959Ga0208462_10409592F092293MTRPPTLTDRQIQIIQENLDRFPADILKLPEFTDTDVTRHTIRNYQRRLKNAAVIDEEEALLTRLKQYMNRYGLESRFHGPRGVTGFITHLEKQIDLRAVERDNSENSAV
Ga0208462_1047915Ga0208462_10479151F051949MFADAGTARLDFFTDSLLLEVGDDLFLAKLSRLSPLMQGRVAHCPLSRRYLGTNGHYCDVEQGIGLRRSKPGAALIFVERGTIYSIPVVELREVLHGVRTACTI
Ga0208462_1048582Ga0208462_10485822F049068VEVGSIECGGKTHLLLTGLDGEARFGDRQLGCIAVLPVGVE
Ga0208462_1055283Ga0208462_10552831F010099RIGVVIGAVLLIAGLFWLASLPQNKYRPCDLLEPTYAADADLGYWMVNKYDQEVDVYHLLVVMEHPNGTFEWLDGDGIWLPRRAVEGTFTVIGSFDARKAHL
Ga0208462_1055991Ga0208462_10559911F103500REVERLPVETKRLLATFAYILPGEPILLFQVETWLSMKDDGGSWWEVPAYLSLVAISLSDVVKASERAKKRVLRVVTRI
Ga0208462_1071093Ga0208462_10710932F045124VSDDTTLQAMIYETRQDVRWIKDTLREIKEANQAQDERINEIKARQDRQIGRDGAIAAAISAVVAFF
Ga0208462_1072289Ga0208462_10722892F042353MMDPDPEYRIPAAAREELEKIIKEDLEHATVSSAMVLVEESGRIVINELVLRLEDGRMVTLMPLGVPAETAVDLRLDIYDDHLSGGHGWREATVDDDYAEELADATRVWHPEPDTAEEAR
Ga0208462_1073480Ga0208462_10734802F003987MIPALPCGTYGEGDTPAGAFYVAAFEDGDQTHHVGEYRIETVIRALRALQACGYDDVEIGSIERGGKTHLLLIGLDGEARFGDRQLG

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