x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our
privacy policy.
OK
Sample 3300023290
3300023290: Human gut microbial communities from healthy child feces in Northridge, California, USA -- CDI_10B
Overview
Basic Information |
---|
IMG/M Taxon OID | 3300023290 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0133482 | Gp0295774 | Ga0256628 |
Sample Name | Human gut microbial communities from healthy child feces in Northridge, California, USA -- CDI_10B |
Sequencing Status | Permanent Draft |
Sequencing Center | University of California, Irvine |
Published? | N |
Use Policy | Open |
Dataset Contents |
---|
Total Genome Size | 135771072 |
Sequencing Scaffolds | 9 |
Novel Protein Genes | 9 |
Associated Families | 9 |
Dataset Phylogeny |
---|
Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii | 5 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales | 1 |
Not Available | 1 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Roseburia → Roseburia faecis | 1 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1 |
Ecosystem and Geography
Ecosystem Assignment (GOLD) |
---|
Name | Child Gut Microbiome |
Type | Host-Associated |
Taxonomy | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Gut → Child Gut Microbiome |
Alternative Ecosystem Assignments |
---|
Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal distal gut |
Location Information |
---|
Location | USA: Northridge, California |
Coordinates | Lat. (o) | 34.2381 | Long. (o) | -118.5301 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map |
---|
|
Zoom: |
Powered by OpenStreetMap © |
Associated Families
Associated Scaffolds
Sequences